Pregenerated sensors for EXOSC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000178896Ensembl transcript IDs: ENST00000316052.6, ENST00000525936.1, ENST00000527954.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCTCCGCGCCTGGATCTTaGGCAGCTCCCCGGCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASISAPGS*AAPRRA Trigger: GGCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGA...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCGCCGAGCCGTCAGCCTaGGCGAACACGCCCATCCGC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIAEPSA*ANTPIR Trigger: GCGGATGGGCGTGTTCGCGCAGGCTGACGGCTCGGC...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCGGTCCGCCAGGGCTGTaGCGTCCACGAAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIGPPGL*RPRSQL Trigger: CAGCTGGCTTCGTGGACGGCACAGCCCTGGCGGACC...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCACGCCCATCCGCGCCTaGATCTTGCGCAGCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASITPIRA*ILRSSP Trigger: CGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGT...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCTTCCTCCACATGGCTaGGGTCCGCCAGGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASILPPHG*GPPGLC Trigger: GCACAGCCCTGGCGGACCTCAGCCATGTGGAGGAAG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCAACACCCGCTCCAGGTaGTCCTCGTGCAGCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASINTRSR*SSCSRA Trigger: TGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTT...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCCCGGCATCCAGCACTaGCAGCGTGGCTGCATTCAC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIPGIQH*QRGCIH Trigger: GTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCTGGGGGCCACCAGCTaGTTCCTCCACATGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASILGATS*FLHMAE Trigger: CTCAGCCATGTGGAGGAAGCAGCTGGTGGCCCCCAG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCGCTGCTTCCTCCACATaGCTGAGGTCCGCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIAASST*LRSARA Trigger: AGCCCTGGCGGACCTCAGCCATGTGGAGGAAGCAGC...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCTCCAGGTGGTCCTCGTaGAGCCGGGCATCCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASISRWSS*SRASIS Trigger: TGAGATGGATGCCCGGCTGCACGAGGACCACCTGGA...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCGTCCACGAAGCCAGCTaGGCACGCACACACAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIVHEAS*ARTHKV Trigger: GACTTTGTGTGTGCGTGCTCAGCTGGCTTCGTGGAC...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCTCTGCCTACTTCTCTaGGCCGCGGGAGAACTACAG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASILCLLL*AAGELQ Trigger: CTGTAGTTCTCCCGCGGCTCAGAGAAGTAGGCAGAG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCCAGTGCCTTGGTGTTaGCCTGCTCAATGTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIPVPWC*PAQCRP Trigger: CGGCCTACATTGAGCAGGGCAACACCAAGGCACTGG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCCACTGCCAGCGTGGCTaGATTCACACAAGCTGCATA | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIHCQRG*IHTSCI Trigger: TATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTG...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCGTCGCTGAACTATATTaGCAGTTCACTAGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASIVAELY*QFTRAL Trigger: CAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGAC...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR GCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCTGCATTCACACAAGCTaGATAGGTCCCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASICIHTS*IGPTIC Trigger: GCAGATGGTGGGACCTATGCAGCTTGTGTGAATGCA...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCACACAAAGTCTCTCATaGGTATCCCGGCATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASITQSLS*VSRHPA Trigger: TGCTGGATGCCGGGATACCCATGAGAGACTTTGTGT...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS-3UTR TCA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCTGTGCTGAAGGTCGCTaGACTATATTGACAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: AAASNTRSRWSSCSRASICAEGR*TILTVH Trigger: GTGAACTGTCAATATAGTTCAGCGACCTTCAGCACA...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS GCA 90 bp | CCGAGCCGTCAGCCTGCGCGAACACGCCCATCCGCGCCTGGATCTTaGGCAGCTCCCCGGCGCGCCGCCCGTCCACCCGGTAGCCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PSRQPARTRPSAPGS*AAPRRAARPPGSPG Trigger: ACCAGGGCTACCGGGTGGACGGGCGGCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTCGCGCAGGCTGACGGCTCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS TCA 90 bp | GGGCCAGGGCCAGCTGGGGGCCACCAGCTGCTTCCTCCACATGGCTaGGGTCCGCCAGGGCTGTGCCGTCCACGAAGCCAGCTGAGCACG | + |
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Preference number: 5 (lower is better) Translates to: GPGPAGGHQLLPPHG*GPPGLCRPRSQLST Trigger: CGTGCTCAGCTGGCTTCGTGGACGGCACAGCCCTGGCGGACCTCAGCCATGTGGAGGAAGCAGCTGGTGGCCCCCAGCTGGCCCTGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS-3UTR CAA 90 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTGCAGCCGGGCATCCATCATCCGCGCCTGGATCTaGCGCAGCTCCCCGGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: AAASNTRSRWSSCSRASIIRAWI*RSSPAR Trigger: GCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGAT...GATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS GCA 90 bp | CCCGGATCTCGTGCGGGCCGTAGACCACAGCCAGTGCCTTGGTGTTaGCCTGCTCAATGTAGGCCGAGCCGTCAGCCTGCGCGAACACGC | + |
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Preference number: 5 (lower is better) Translates to: PGSRAGRRPQPVPWC*PAQCRPSRQPARTR Trigger: GCGTGTTCGCGCAGGCTGACGGCTCGGCCTACATTGAGCAGGGCAACACCAAGGCACTGGCTGTGGTCTACGGCCCGCACGAGATCCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS TCA 90 bp | GGCCGTCGCTTGCGCTCACCTGTGCTGAAGGTCGCTGAACTATATTaGCAGTTCACTAGGGCCCTGTCCGGCAGGGCTCGAGCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GRRLRSPVLKVAELY*QFTRALSGRARARE Trigger: CTCCCGGGCTCGAGCCCTGCCGGACAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGAGCGCAAGCGACGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS TCA 90 bp | AGGGCTCGAGCCCGGGAGCCCCGGATCTGGAAGAGGACAGACACATaGGCCAGGCCCACTCCTTCCAGCTCACACTCCACTGTCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RARAREPRIWKRTDT*ARPTPSSSHSTVLC Trigger: ACAGAGGACAGTGGAGTGTGAGCTGGAAGGAGTGGGCCTGGCTCATGTGTCTGTCCTCTTCCAGATCCGGGGCTCCCGGGCTCGAGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS GCA 90 bp | GGGTGCAGCTGTGTGAGGATGGCTGCTTCGAAAGTCTGGCGGAGCTaGAGGCCCATCTCACAGGACTTACGGTCCCCATGTGGCCGTCGC | + |
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Preference number: 5 (lower is better) Translates to: GCSCVRMAASKVWRS*RPISQDLRSPCGRR Trigger: GCGACGGCCACATGGGGACCGTAAGTCCTGTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCAGCCATCCTCACACAGCTGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS GCA 90 bp | CTGGGTGGTCAGTCCCCCAGCAAGATAGAGGCCTCACGCACATGCTaGCGGACCACTCGATCTAAGAGGGTGTGCACATCTCGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LGGQSPSKIEASRTC*RTTRSKRVCTSRAA Trigger: GGCTGCCCGAGATGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTGCGTGAGGCCTCTATCTTGCTGGGGGACTGACCACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316052.6 |
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| CDS GCA 90 bp | TGGCTGGGTGGTCAGTCCCCCAGCAAGATAGAGGCCTCACGCACATaGTGCCGGACCACTCGATCTAAGAGGGTGTGCACATCTCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: WLGGQSPSKIEASRT*CRTTRSKRVCTSRA Trigger: TGCCCGAGATGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTGCGTGAGGCCTCTATCTTGCTGGGGGACTGACCACCCAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316052.6 |
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| CDS CCA 90 bp | TGGGAGCGTGGGTGCAGCTGTGTGAGGATGGCTGCTTCGAAAGTCTaGCGGAGCTGCAGGCCCATCTCACAGGACTTACGGTCCCCATGT | + |
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Preference number: 5 (lower is better) Translates to: WERGCSCVRMAASKV*RSCRPISQDLRSPC Trigger: ACATGGGGACCGTAAGTCCTGTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCAGCCATCCTCACACAGCTGCACCCACGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS TCA 90 bp | CACCATCTGCCTGTAGCACCTGTGCTGAAGGTCGCTGAACTATATTaGCAGTTCACTAGGGCCCTGTCCGGCAGGGCTCGAGCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: HHLPVAPVLKVAELY*QFTRALSGRARARE Trigger: CTCCCGGGCTCGAGCCCTGCCGGACAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGCTACAGGCAGATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS GCA 90 bp | CAGGCCCACTCCTTCCAGCTCACACTCCACTGTCCTCTGTGGGTCTaGCTCTCCCTCCACTTTCAATGCCTCAGCAAGGGGCAACTGCGT | + |
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Preference number: 5 (lower is better) Translates to: QAHSFQLTLHCPLWV*LSLHFQCLSKGQLR Trigger: ACGCAGTTGCCCCTTGCTGAGGCATTGAAAGTGGAGGGAGAGGCAGACCCACAGAGGACAGTGGAGTGTGAGCTGGAAGGAGTGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS CCA 90 bp | TGCCGTCCACGAAGCCAGCTGAGCACGCACACACAAAGTCTCTCATaGGTATCCCGGCATCCAGCACTGCCAGCGTGGCTGCATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: CRPRSQLSTHTQSLS*VSRHPALPAWLHSH Trigger: GTGTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAGACTTTGTGTGTGCGTGCTCAGCTGGCTTCGTGGACGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS TCA 90 bp | AGGACTTACGGTCCCCATGTGGCCGTCGCTTGCGCTCACCTGTGCTaGAGGTCGCTGAACTATATTGACAGTTCACTAGGGCCCTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: RTYGPHVAVACAHLC*RSLNYIDSSLGPCP Trigger: CGGACAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGAGCGCAAGCGACGGCCACATGGGGACCGTAAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS GCA 90 bp | GCACGCACACACAAAGTCTCTCATGGGTATCCCGGCATCCAGCACTaGCAGCGTGGCTGCATTCACACAAGCTGCATAGGTCCCACCATC | + |
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Preference number: 5 (lower is better) Translates to: ARTHKVSHGYPGIQH*QRGCIHTSCIGPTI Trigger: GATGGTGGGACCTATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAGACTTTGTGTGTGCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS CCA 90 bp | ACACAAAGTCTCTCATGGGTATCCCGGCATCCAGCACTGCCAGCGTaGCTGCATTCACACAAGCTGCATAGGTCCCACCATCTGCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: TQSLSWVSRHPALPA*LHSHKLHRSHHLPV Trigger: TACAGGCAGATGGTGGGACCTATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAGACTTTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS CCA 90 bp | TTGCGCTCTCTGTCTTGCATGTGTCGCCCTCTGGCACCTTTTAATTaGCTTCCTTGTGTCCATCCTTGCCCCATTCCCTGCCAACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LRSLSCMCRPLAPFN*LPCVHPCPIPCQPK Trigger: CTTGGGTTGGCAGGGAATGGGGCAAGGATGGACACAAGGAAGCCAATTAAAAGGTGCCAGAGGGCGACACATGCAAGACAGAGAGCGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS GCA 72 bp | CAGCCTGCGCGAACACGCCCATCCGCGCCTGGATCTTaGGCAGCTCCCCGGCGCGCCGCCCGTCCACCCGGT | + |
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Preference number: 6 (lower is better) Translates to: QPARTRPSAPGS*AAPRRAARPPG Trigger: ACCGGGTGGACGGGCGGCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTCGCGCAGGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS CCA 72 bp | GAGCCGTCAGCCTGCGCGAACACGCCCATCCGCGCCTaGATCTTGCGCAGCTCCCCGGCGCGCCGCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: EPSACANTPIRA*ILRSSPARRPS Trigger: GGACGGGCGGCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTCGCGCAGGCTGACGGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS CAA 72 bp | TCAGCCTGCGCGAACACGCCCATCCGCGCCTGGATCTaGCGCAGCTCCCCGGCGCGCCGCCCGTCCACCCGG | + |
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Preference number: 6 (lower is better) Translates to: SACANTPIRAWI*RSSPARRPSTR Trigger: CCGGGTGGACGGGCGGCGCGCCGGGGAGCTGCGCAAGATCCAGGCGCGGATGGGCGTGTTCGCGCAGGCTGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS GCA 72 bp | GGTAGCCCTGGTCCGACAAGAGCTCCAGCCCCGCCATaGTGCCCGGCCGCCAGGTCCGCTCTCTGCCTACTT | + |
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Preference number: 6 (lower is better) Translates to: GSPGPTRAPAPP*CPAARSALCLL Trigger: AAGTAGGCAGAGAGCGGACCTGGCGGCCGGGCAGCATGGCGGGGCTGGAGCTCTTGTCGGACCAGGGCTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS GCA 72 bp | CGTGCGGGCCGTAGACCACAGCCAGTGCCTTGGTGTTaGCCTGCTCAATGTAGGCCGAGCCGTCAGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RAGRRPQPVPWC*PAQCRPSRQPA Trigger: CGCAGGCTGACGGCTCGGCCTACATTGAGCAGGGCAACACCAAGGCACTGGCTGTGGTCTACGGCCCGCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000525936.1 |
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| CDS GCA 72 bp | GCAGCAGCCTCCAACACCCGCTCCAGGTGGTCCTCGTaGAGCCGGGCATCCATCTCAAGCAGCGCAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: AAASNTRSRWSS*SRASISSSAIC Trigger: ACAGATTGCGCTGCTTGAGATGGATGCCCGGCTGCACGAGGACCACCTGGAGCGGGTGTTGGAGGCTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS GCA 72 bp | CGCACATGCTGCCGGACCACTCGATCTAAGAGGGTGTaGACATCTCGGGCAGCCTGGGCAGCAGCCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RTCCRTTRSKRV*TSRAAWAAASN Trigger: GTTGGAGGCTGCTGCCCAGGCTGCCCGAGATGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS CCA 72 bp | CTGCAGGCCCATCTCACAGGACTTACGGTCCCCATGTaGCCGTCGCTTGCGCTCACCTGTGCTGAAGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: LQAHLTGLTVPM*PSLALTCAEGR Trigger: GCGACCTTCAGCACAGGTGAGCGCAAGCGACGGCCACATGGGGACCGTAAGTCCTGTGAGATGGGCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS CCA 72 bp | GGGTGCAGCTGTGTGAGGATGGCTGCTTCGAAAGTCTaGCGGAGCTGCAGGCCCATCTCACAGGACTTACGG | + |
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Preference number: 6 (lower is better) Translates to: GCSCVRMAASKV*RSCRPISQDLR Trigger: CCGTAAGTCCTGTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCAGCCATCCTCACACAGCTGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS CCA 72 bp | CGAAGCCAGCTGAGCACGCACACACAAAGTCTCTCATaGGTATCCCGGCATCCAGCACTGCCAGCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSQLSTHTQSLS*VSRHPALPAWL Trigger: CAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAGACTTTGTGTGTGCGTGCTCAGCTGGCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS GCA 72 bp | GGTCAGTCCCCCAGCAAGATAGAGGCCTCACGCACATaGTGCCGGACCACTCGATCTAAGAGGGTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GQSPSKIEASRT*CRTTRSKRVCT Trigger: TGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTGCGTGAGGCCTCTATCTTGCTGGGGGACTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316052.6 |
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| CDS GCA 72 bp | TGTGTGAGGATGGCTGCTTCGAAAGTCTGGCGGAGCTaGAGGCCCATCTCACAGGACTTACGGTCCCCATGT | + |
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Preference number: 6 (lower is better) Translates to: CVRMAASKVWRS*RPISQDLRSPC Trigger: ACATGGGGACCGTAAGTCCTGTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCAGCCATCCTCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS GCA 72 bp | CAGTCCCCCAGCAAGATAGAGGCCTCACGCACATGCTaGCGGACCACTCGATCTAAGAGGGTGTGCACATCT | + |
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Preference number: 6 (lower is better) Translates to: QSPSKIEASRTC*RTTRSKRVCTS Trigger: AGATGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTGCGTGAGGCCTCTATCTTGCTGGGGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316052.6 |
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| CDS CCA 72 bp | CTCTCATGGGTATCCCGGCATCCAGCACTGCCAGCGTaGCTGCATTCACACAAGCTGCATAGGTCCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: LSWVSRHPALPA*LHSHKLHRSHH Trigger: ATGGTGGGACCTATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS CCA 72 bp | CCTTGCTTGTTTTCACCACCGTGGTCTTCGCCCTTCTaGTTCCCTCCGCCTGGAAAGCAGAGCTCCCACACT | + |
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Preference number: 6 (lower is better) Translates to: PCLFSPPWSSPF*FPPPGKQSSHT Trigger: AGTGTGGGAGCTCTGCTTTCCAGGCGGAGGGAACCAGAAGGGCGAAGACCACGGTGGTGAAAACAAGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS TCA 72 bp | TTGCGCTCACCTGTGCTGAAGGTCGCTGAACTATATTaGCAGTTCACTAGGGCCCTGTCCGGCAGGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LRSPVLKVAELY*QFTRALSGRAR Trigger: TCGAGCCCTGCCGGACAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGAGCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS TCA 72 bp | GGTCCCCATGTGGCCGTCGCTTGCGCTCACCTGTGCTaGAGGTCGCTGAACTATATTGACAGTTCACTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GPHVAVACAHLC*RSLNYIDSSLG Trigger: CCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGAGCGCAAGCGACGGCCACATGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS TCA 72 bp | CCTGTAGCACCTGTGCTGAAGGTCGCTGAACTATATTaGCAGTTCACTAGGGCCCTGTCCGGCAGGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: PVAPVLKVAELY*QFTRALSGRAR Trigger: TCGAGCCCTGCCGGACAGGGCCCTAGTGAACTGTCAATATAGTTCAGCGACCTTCAGCACAGGTGCTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525936.1 |
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| CDS GCA 72 bp | CACAAAGTCTCTCATGGGTATCCCGGCATCCAGCACTaGCAGCGTGGCTGCATTCACACAAGCTGCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: HKVSHGYPGIQH*QRGCIHTSCIG Trigger: ACCTATGCAGCTTGTGTGAATGCAGCCACGCTGGCAGTGCTGGATGCCGGGATACCCATGAGAGACTTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316052.6 ENST00000525936.1 ENST00000527954.1 |
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| CDS GCA 72 bp | TGTCCTCTGTGGGTCTGCCTCTCCCTCCACTTTCAATaGCTCAGCAAGGGGCAACTGCGTTACCTCCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: CPLWVCLSLHFQ*LSKGQLRYLQN Trigger: GTTTTGGAGGTAACGCAGTTGCCCCTTGCTGAGGCATTGAAAGTGGAGGGAGAGGCAGACCCACAGAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS CAA 72 bp | ATCTCACAGGACTTACGGTCCCCATGTGGCCGTCGCTaGCGCTCACCTGTGCTGAAGGTCGCTGAACTATAT | + |
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Preference number: 6 (lower is better) Translates to: ISQDLRSPCGRR*RSPVLKVAELY Trigger: ATATAGTTCAGCGACCTTCAGCACAGGTGAGCGCAAGCGACGGCCACATGGGGACCGTAAGTCCTGTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000316052.6 ENST00000527954.1 |
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| CDS CAA 72 bp | TCCCCACCAGCAGTCTTTCTGCTCTGCATAAGTGCCTaGCTTGTTTTCACCACCGTGGTCTTCGCCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPPAVFLLCISA*LVFTTVVFALL Trigger: CAGAAGGGCGAAGACCACGGTGGTGAAAACAAGCAAGGCACTTATGCAGAGCAGAAAGACTGCTGGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS GCA 72 bp | TCTTTCCCCACCAGCAGTCTTTCTGCTCTGCATAAGTaGCTTGCTTGTTTTCACCACCGTGGTCTTCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SFPTSSLSALHK*LACFHHRGLRP Trigger: AGGGCGAAGACCACGGTGGTGAAAACAAGCAAGGCACTTATGCAGAGCAGAAAGACTGCTGGTGGGGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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| CDS CCA 72 bp | CTGTTTTGCGCTCTCTGTCTTGCATGTGTCGCCCTCTaGCACCTTTTAATTGGCTTCCTTGTGTCCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFCALCLACVAL*HLLIGFLVSIL Trigger: AAGGATGGACACAAGGAAGCCAATTAAAAGGTGCCAGAGGGCGACACATGCAAGACAGAGAGCGCAAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527954.1 |
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