RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXOC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000138190

Ensembl transcript IDs: ENST00000260762.10, ENST00000371543.5, ENST00000371552.8, ENST00000443748.6, ENST00000458552.1, ENST00000495132.5, ENST00000671701.1, ENST00000672817.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATGCTAGCTaGAGGGTATCCCCCTGGAATCCTGGCACAGGCTCAGAGCTGGCA +
Preference number: 1 (lower is better)
Translates to: TINRSRSCLRSMNAS*RVSPWNPGTGSELA
Trigger: TGCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR GCA 90 bp CTGCTATTTGAAGAAAGTAACCTGACCCCTGTGGTAACTTCTGTGTaGAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTA +
Preference number: 1 (lower is better)
Translates to: LLFEESNLTPVVTSV*RNHLPSHKLHLKWL
Trigger: TAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTCAGGTTACTTTCTTCAAATAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR GCA 90 bp CATGGATTTGGTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTaGTGGGACATACCATTCACCAAACTTCTCAGCTGTTTCACGACT +
Preference number: 1 (lower is better)
Translates to: HGFGVTECKPCEVYM*WDIPFTKLLSCFTT
Trigger: AGTCGTGAAACAGCTGAGAAGTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACACCAAATCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR GCA 90 bp ACTTGCTCAAGATCAACATTGAATCATGGATTTGGTGTCACTGAGTaGAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACC +
Preference number: 1 (lower is better)
Translates to: TCSRSTLNHGFGVTE*KPCEVYMCWDIPFT
Trigger: GGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACACCAAATCCATGATTCAATGTTGATCTTGAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR CCA 90 bp TTTGCTAGTATCCTTCATCTTCTCCAAAAGAGTAAGGGCTGTGTTTaGATTCACCCGAAGGTACTTAGAAGCTGGCTGCCCATAATCAGC +
Preference number: 1 (lower is better)
Translates to: FASILHLLQKSKGCV*IHPKVLRSWLPIIS
Trigger: GCTGATTATGGGCAGCCAGCTTCTAAGTACCTTCGGGTGAATCCAAACACAGCCCTTACTCTTTTGGAGAAGATGAAGGATACTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR TCA 90 bp AGAGTTCATTTGGTTTGGCTTGTTTCCACAATGAGGATAAAGTACTaGAATCTGCTATTTGAAGAAAGTAACCTGACCCCTGTGGTAACT +
Preference number: 1 (lower is better)
Translates to: RVHLVWLVSTMRIKY*NLLFEESNLTPVVT
Trigger: AGTTACCACAGGGGTCAGGTTACTTTCTTCAAATAGCAGATTTCAGTACTTTATCCTCATTGTGGAAACAAGCCAAACCAAATGAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CCA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAAATCCCCCTGGAATCCTaGCACAGGCTCAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: SRPIPNHKQVKELSEVNEIPLES*HRLRAG
Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGAT...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CCA 90 bp AGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATGCTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCA +
Preference number: 2 (lower is better)
Translates to: RPIPNHKQVKELSEVNECCRVSP*NPGTGS
Trigger: TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCA...GCATTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACAAACAAATCCAGAATaGGGTCACCTACAAGCAATA +
Preference number: 2 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAQTNPE*GHLQAI
Trigger: TATTGCTTGTAGGTGACCCCATTCTGGATTTGTTTG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR TCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTACCATATCAGACATaGTTGAATTCCAAAGCCATA +
Preference number: 2 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALPYQT*LNSKAI
Trigger: TATGGCTTTGGAATTCAATCATGTCTGATATGGTAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCAAACAAATCCAGAATaGGGTCACCTACAAGCAATA +
Preference number: 2 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFQTNPE*GHLQAI
Trigger: TATTGCTTGTAGGTGACCCCATTCTGGATTTGTTTG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAGCACAGGCTCAGAGCTaGCAAACATTTCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSAQAQS*QTFQLK
Trigger: TTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGC...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CCA 90 bp CTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACCAAACAGTAAGGGCTGTGTTTaGATTCACCCGAAGGTACTT +
Preference number: 2 (lower is better)
Translates to: LSASHVRSTCAGTYHSPNSKGCV*IHPKVL
Trigger: AAGTACCTTCGGGTGAATCCAAACACAGCCCTTACT...GTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACAAACAAATCCAGAATaGGGTCACCTACAAGCAATA +
Preference number: 2 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEQTNPE*GHLQAI
Trigger: TATTGCTTGTAGGTGACCCCATTCTGGATTTGTTTG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTACCATATCAGACATaGTTGAATTCCAAAGCCATA +
Preference number: 2 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELPYQT*LNSKAI
Trigger: TATGGCTTTGGAATTCAATCATGTCTGATATGGTAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR TCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTGGTGGGGAGGTGAAATaGGGTCTCCCTATATTGCCC +
Preference number: 2 (lower is better)
Translates to: MIKLLGENLLGNRTHILLGGEVK*GLPILP
Trigger: GGGCAATATAGGGAGACCTCATTTCACCTCCCCACC...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR TCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGAAGGGGGTGGGGAGGTaGAATGAGGTCTCCCTATAT +
Preference number: 2 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKKGVGR*NEVSLY
Trigger: ATATAGGGAGACCTCATTTCACCTCCCCACCCCCTT...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR GCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGGAGGTCTCCCTATATTaGCCACGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKEVSLY*PRWSQT
Trigger: AGTTTGAGACCAGCGTGGGCAATATAGGGAGACCTC...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR GCA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATCTCAGACTCCCAAAGTaGCGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: KLLGENLLGNRTHILLINLRLPK*RDYKHE
Trigger: CTCATGCTTGTAATCCCGGCACTTTGGGAGTCTGAG...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR TCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTCGGCTATTTGTACTTaGTCAACATTACCAATCCTT +
Preference number: 2 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLSAICT*STLPIL
Trigger: AAGGATTGGTAATGTTGATCAAGTACAAATAGCCGA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR TCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTAACCTAAGGACAACATaGCTTTATAAGCCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: MIKLLGENLLGNRTHILLNLRTT*LYKPPD
Trigger: ATCAGGAGGCTTATAAAGTCATGTTGTCCTTAGGTT...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACTACCATATCAGACATaGTTGAATTCCAAAGCCATA +
Preference number: 2 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELPYQT*LNSKAI
Trigger: TATGGCTTTGGAATTCAATCATGTCTGATATGGTAG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR CCA 72 bp CTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCAGAGCTGGCAAACATT +
Preference number: 3 (lower is better)
Translates to: LRSMNASCRVSP*NPGTGSELANI
Trigger: AATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR GCA 72 bp GAAGAAAGTAACCTGACCCCTGTGGTAACTTCTGTGTaGAGGAACCATCTACCCTCGCACAAGCTGCACCTG +
Preference number: 3 (lower is better)
Translates to: EESNLTPVVTSV*RNHLPSHKLHL
Trigger: CAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTCAGGTTACTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR GCA 72 bp GGTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTaGTGGGACATACCATTCACCAAACTTCTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: GVTECKPCEVYM*WDIPFTKLLSC
Trigger: ACAGCTGAGAAGTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPECSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFCSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CAA 90 bp CTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACCAAACTCTATCAACTTCTGTTaGTCTCGATCATTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: LSASHVRSTCAGTYHSPNSINFC*SRSFFL
Trigger: CAGGAAGAATGATCGAGACAAACAGAAGTTGATAGA...GTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CAA 90 bp CACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGAGCAAACAGGTCAAGGAGTaGTCTGAGGTCAATGAATGC +
Preference number: 3 (lower is better)
Translates to: HDCLYQLLFVSIILPELSKQVKE*SEVNEC
Trigger: GCATTCATTGACCTCAGACAACTCCTTGACCTGTTT...GCTCAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR GCA 72 bp AGATCAACATTGAATCATGGATTTGGTGTCACTGAGTaGAAGCCATGTGAGGTCTACATGTGCTGGGACATA +
Preference number: 3 (lower is better)
Translates to: RSTLNHGFGVTE*KPCEVYMCWDI
Trigger: TATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACACCAAATCCATGATTCAATGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR-3UTR CAA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTGTTCAAGTGATCCCCTaGCCTCAGACTCCCAAAGTG +
Preference number: 3 (lower is better)
Translates to: MIKLLGENLLGNRTHILLVQVIP*PQTPKV
Trigger: CACTTTGGGAGTCTGAGGCAAGGGGATCACTTGAAC...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR CAA 90 bp CTGTTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAATGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: LFHDCLYQLLFVSIILPECSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...TTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
3UTR TCA 72 bp TTGGTTTGGCTTGTTTCCACAATGAGGATAAAGTACTaGAATCTGCTATTTGAAGAAAGTAACCTGACCCCT +
Preference number: 3 (lower is better)
Translates to: LVWLVSTMRIKY*NLLFEESNLTP
Trigger: AGGGGTCAGGTTACTTTCTTCAAATAGCAGATTTCAGTACTTTATCCTCATTGTGGAAACAAGCCAAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: SRMGSPTSNIVRNINPDECSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
3UTR-3UTR CAA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATTTCCTGTTCGGCTATTaGTACTTGATCAACATTACC +
Preference number: 3 (lower is better)
Translates to: KLLGENLLGNRTHILLINFLFGY*YLINIT
Trigger: GGTAATGTTGATCAAGTACAAATAGCCGAACAGGAA...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
3UTR-3UTR CAA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATTTCGGCTATTTGTACTaGATCAACATTACCAATCCT +
Preference number: 3 (lower is better)
Translates to: KLLGENLLGNRTHILLINFGYLY*INITNP
Trigger: AGGATTGGTAATGTTGATCAAGTACAAATAGCCGAA...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAACACAGACCGGAGGGTaGGCCCCACACAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAATQTGG*APHRRC
Trigger: ACACCGCCTGTGTGGGGCCCACCCTCCGGTCTGTGT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAATCCCCCTGGAATCCTaGCACAGGCTCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAIPLES*HRLRAG
Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGAT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACGTGCTCGGGGACGGTaGCCAGACTCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPERARGR*PDSRCS
Trigger: AGAACAGCGAGAGTCTGGGCACCGTCCCCGAGCACG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACACAGGCGGTGTCGGTaGTCTCGATCTCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAHRRCR*SRSPAR
Trigger: TCTTGCAGGAGATCGAGAGCACCGACACCGCCTGTG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTATCCCCCTGGAATCCTaGCACAGGCTCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFIPLES*HRLRAG
Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGAT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCAGATGCTGGCAGGCTaGCATGCAAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFQMLAG*HASCLS
Trigger: GCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTATTTTGGCTGGAAGCTaGGGAGCCAGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFILAGS*GASEAR
Trigger: CCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAAT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFCRVSP*NPGTGS
Trigger: TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACAGATGCTGGCAGGCTaGCATGCAAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEQMLAG*HASCLS
Trigger: GCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACACAGGCGGTGTCGGTaGTCTCGATCTCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEHRRCR*SRSPAR
Trigger: TCTTGCAGGAGATCGAGAGCACCGACACCGCCTGTG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAATCCCCCTGGAATCCTaGCACAGGCTCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSIPLES*HRLRAG
Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGAT...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTCCGCCATTTTGGCTaGAAGCTGAGGAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELRHFG*KLRSQR
Trigger: TCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCAGATGCTGGCAGGCTaGCATGCAAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFQMLAG*HASCLS
Trigger: GCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGTGGTAACTTCTGTGTaGAGGAACCATCTACCCTCG +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAVVTSV*RNHLPS
Trigger: CGAGGGTAGATGGTTCCTGCACACAGAAGTTACCAC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGATGTTGACAGATGCTaGCAGGCTGACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAADVDRC*QADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFCRVSP*NPGTGS
Trigger: TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFDMQAV*ATFPGK
Trigger: TTTGCCTGGGAAAGTTGCTCAGACAGCTTGCATGTC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATGTGAGGTCTACATGTaGTGGGACATACCATTCACC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAACEVYM*WDIPFT
Trigger: GGTGAATGGTATGTCCCAGCACATGTAGACCTCACA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTTGGTGTCACTGAGTaGAAGCCATGTGAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAFGVTE*KPCEVY
Trigger: GTAGACCTCACATGGCTTGCACTCAGTGACACCAAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGATGTTGACAGATGCTaGCAGGCTGACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFDVDRC*QADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGCACAGGCTCAGAGCTaGCAAACAATTCACACTGTA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAAQAQS*QTIHTV
Trigger: TACAGTGTGAATTGTTTGCCAGCTCTGAGCCTGTGC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAAAGCTGCACCTGAAGTaGTTAGCCCCATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAKLHLK*LAPFSS
Trigger: GGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATCTGCAGAGAAACACTaGAGGTTTTCTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAASAEKH*RFSDAV
Trigger: CACAGCATCAGAAAACCTTCAGTGTTTCTCTGCAGA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEDMQAV*ATFPGK
Trigger: TTTGCCTGGGAAAGTTGCTCAGACAGCTTGCATGTC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTGTGAGGTCTACATGTaGTGGGACATACCATTCACC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFCEVYM*WDIPFT
Trigger: GGTGAATGGTATGTCCCAGCACATGTAGACCTCACA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCCACCTCAGGGTTTATaGTCCTGCTCTCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFPPQGL*SCSPLF
Trigger: AAAGAGGGGAGAGCAGGAGCATAAACCCTGAGGTGG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671701.1
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGCACTGACTGAGACATaGGGAATTTCTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAALTET*GISLGK
Trigger: CTTTCCCAAAGAAATTCCCCATGTCTCAGTCAGTGC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTACTAGCTCTTCCATCTaGCTCAGACATTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFTSSSI*LRHCPV
Trigger: GACTGGACAATGTCTGAGCCAGATGGAAGAGCTAGT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAAGCTGCACCTGAAGTaGTTAGCCCCATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFKLHLK*LAPFSS
Trigger: GGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTGTTCTCCGCCATTTTaGCTGGAAGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFCSPPF*LEAEEP
Trigger: TGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCTGCAGAGAAACACTaGAGGTTTTCTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSAEKH*RFSDAV
Trigger: CACAGCATCAGAAAACCTTCAGTGTTTCTCTGCAGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATATATTCTTCTTCATTaGCAACAGGGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAYILLH*QQGWGC
Trigger: ACAGCCCCATCCCTGTTGTCAATGAAGAAGAATATA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATCAAGGTCTGGATCTTaGAAGGGAAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAASRSGS*KGNLLM
Trigger: CATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp AGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCACAGGCTCAGTAAATATGAGGCACTaGCTGAGACATGGGGAATTT +
Preference number: 4 (lower is better)
Translates to: RSMNASCRVSPWNPGTGSVNMRH*LRHGEF
Trigger: AAATTCCCCATGTCTCAGTCAGTGCCTCATATTTAC...TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSDMQAV*ATFPGK
Trigger: TTTGCCTGGGAAAGTTGCTCAGACAGCTTGCATGTC...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATACAGGCCTAAATCCTaGAAAGGCAAAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAYRPKS*KGKGKI
Trigger: AATCTTCCCTTTGCCTTTTCAGGATTTAGGCCTGTA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGGCAGTTCGAAAGACTaGATCTCAGCCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFGSSKD*ISARTF
Trigger: GAATGTCCTGGCTGAGATTCAGTCTTTCGAACTGCC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR TCA 90 bp CACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGAGCGGCAGGAGGATGACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: HDCLYQLLFVSIILPELSGRRMT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTCATCCTCCTGCC...GCTCAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAATATTCGACTGGGGTTaGAATACCAGTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAIFDWG*NTSLAC
Trigger: ACAAGCAAGACTGGTATTGCAACCCCAGTCGAATAT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCCATCAACTGTTTCATaGATATTCGACTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFPSTVS*IFDWGC
Trigger: GCAACCCCAGTCGAATATGCATGAAACAGTTGATGG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR GCA 90 bp AGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCCCATCAACTGTTTCATaGATATTCGACTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SCLRSMNASCRVSPWNPGPSTVS*IFDWGC
Trigger: GCAACCCCAGTCGAATATGCATGAAACAGTTGATGG...GCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACAAGATCAGGATCAGTaGAATAGGATGAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAQDQDQ*NRMNEL
Trigger: GAGCTCATTCATCCTATTGCACTGATCCTGATCTTG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAAAGGATGTTGACAGATaGTGGCAGGCTGACATGCAA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEKDVDR*WQADMQ
Trigger: TTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALSSSI*IKDVDR
Trigger: TCTGTCAACATCCTTAATGCAGATGCTACTGGACAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATGTGAGGTCTACATGTaGTGGGACATACCATTCACC +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPECEVYM*WDIPFT
Trigger: GGTGAATGGTATGTCCCAGCACATGTAGACCTCACA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGACACAGACCGGAGGGTaGGCCCCACACAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLTQTGG*APHRRC
Trigger: ACACCGCCTGTGTGGGGCCCACCCTCCGGTCTGTGT...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTTCTTGTGCGCATTTaGTTGGTCATCATACACAGA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALLVRI*LVIIHR
Trigger: TCTGTGTATGATGACCAACCAAATGCGCACAAGAAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCATCAGTGTATGCCCTaGTTACTAATCCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFHQCMP*LLILGS
Trigger: TGACCCAAGGATTAGTAACCAGGGCATACACTGATG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CCA 90 bp AGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCCATCAGTGTATGCCCTaGTTACTAATCCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SCLRSMNASCRVSPWNPGHQCMP*LLILGS
Trigger: TGACCCAAGGATTAGTAACCAGGGCATACACTGATG...GCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAAGCTACTCAAAGTTCTaGTCAGCAGCAGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAASYSKF*SAADLL
Trigger: CAACAAATCTGCTGCTGACCAGAACTTTGAGTAGCT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGATGTTGACAGATGCTaGCAGGCTGACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFDVDRC*QADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTAAGGGCTGTGTTTaGATTCACCCGAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSKGCV*IHPKVL
Trigger: AAGTACCTTCGGGTGAATCCAAACACAGCCCTTACT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCTGCAGAGAAACACTaGAGGTTTTCTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESAEKH*RFSDAV
Trigger: CACAGCATCAGAAAACCTTCAGTGTTTCTCTGCAGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTATATTCTTCTTCATTaGCAACAGGGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFYILLH*QQGWGC
Trigger: ACAGCCCCATCCCTGTTGTCAATGAAGAAGAATATA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp AGGTCAAGGAGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGTATATTCTTCTTCATTaGCAACAGGGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRSCLRSMNASCRVSPWYILLH*QQGWGC
Trigger: ACAGCCCCATCCCTGTTGTCAATGAAGAAGAATATA...CCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACTCCTTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCAAGGTCTGGATCTTaGAAGGGAAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSRSGS*KGNLLM
Trigger: CATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGTAAATATGAGGCACTaGCTGAGACATGGGGAATTT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFVNMRH*LRHGEF
Trigger: AAATTCCCCATGTCTCAGTCAGTGCCTCATATTTAC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAACAGATGCTGGCAGGCTaGCATGCAAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRPIPNHKQVKELSEVNEQMLAG*HASCLS
Trigger: GCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTG...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTACAGGCCTAAATCCTaGAAAGGCAAAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFYRPKS*KGKGKI
Trigger: AATCTTCCCTTTGCCTTTTCAGGATTTAGGCCTGTA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTGCAAGATCCGCTCGTaGTCGGGGACGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLCKIRS*SGTVPR
Trigger: TCTGGGCACCGTCCCCGAGCACGAGCGGATCTTGCA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATCCATAAACTTCTTGTaGGCATTTGGTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAASINFL*AFGWSS
Trigger: TGATGACCAACCAAATGCGCACAAGAAGTTTATGGA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTGTGCCTGTTTCATTaGTGTTTCACCTATTTTGTC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALCLFH*CFTYFV
Trigger: GACAAAATAGGTGAAACAGCAATGAAACAGGCACAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTATATTCGACTGGGGTTaGAATACCAGTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFIFDWG*NTSLAC
Trigger: ACAAGCAAGACTGGTATTGCAACCCCAGTCGAATAT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTCTTTGGGAAAGACTaGTTTTCAAGGTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAFFGKD*FSRSGS
Trigger: AGATCCAGACCTTGAAAAGCAGTCTTTCCCAAAGAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTAAGGATGTTGACAGATaGTGGCAGGCTGACATGCAA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFKDVDR*WQADMQ
Trigger: TTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAAAGGATGTTGACAGATaGTGGCAGGCTGACATGCAA +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSKDVDR*WQADMQ
Trigger: TTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTT...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLSSSI*IKDVDR
Trigger: TCTGTCAACATCCTTAATGCAGATGCTACTGGACAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGCTGAACAGCTCCCATaGTTATTTGTTTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAAEQLP*LFVLTH
Trigger: GTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCATGTGAGGTCTACATGTaGTGGGACATACCATTCACC +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSCEVYM*WDIPFT
Trigger: GGTGAATGGTATGTCCCAGCACATGTAGACCTCACA...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTTTGGTGTCACTGAGTaGAAGCCATGTGAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFFGVTE*KPCEVY
Trigger: GTAGACCTCACATGGCTTGCACTCAGTGACACCAAA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAACACAGACCGGAGGGTaGGCCCCACACAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDETQTGG*APHRRC
Trigger: ACACCGCCTGTGTGGGGCCCACCCTCCGGTCTGTGT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTTGTGCGCATTTGGTTaGTCATCATACACAGACCGG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLCAFG*SSYTDR
Trigger: CCGGTCTGTGTATGATGACCAACCAAATGCGCACAA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCATGCATATTCGACTaGGGTTGCAATACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSCIFD*GCNTSL
Trigger: AAGACTGGTATTGCAACCCCAGTCGAATATGCATGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACATCAGTGTATGCCCTaGTTACTAATCCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEHQCMP*LLILGS
Trigger: TGACCCAAGGATTAGTAACCAGGGCATACACTGATG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGCTACTCAAAGTTCTaGTCAGCAGCAGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSYSKF*SAADLL
Trigger: CAACAAATCTGCTGCTGACCAGAACTTTGAGTAGCT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTACTAGCTCTTCCATCTaGCTCAGACATTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFTSSSI*LRHCPV
Trigger: GACTGGACAATGTCTGAGCCAGATGGAAGAGCTAGT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAACTAGCTCTTCCATCTaGCTCAGACATTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSTSSSI*LRHCPV
Trigger: GACTGGACAATGTCTGAGCCAGATGGAAGAGCTAGT...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGCACAGGCTCAGAGCTaGCAAACAATTCACACTGTA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFAQAQS*QTIHTV
Trigger: TACAGTGTGAATTGTTTGCCAGCTCTGAGCCTGTGC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GAATCCTGGCACAGGCTCAGAGCTGGCAAACATTTCAGCTTAAAAGCTTATAAATGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESWHRLRAGKHFSLKAYKCRVSP*NPGTGS
Trigger: TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCA...TTTATAAGCTTTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAAGTAAGGGCTGTGTTTaGATTCACCCGAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESKGCV*IHPKVL
Trigger: AAGTACCTTCGGGTGAATCCAAACACAGCCCTTACT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCTTTTCCAGCATCTTaGAACCTTCGGTTGGTATCA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESFPAS*NLRLVS
Trigger: TGATACCAACCGAAGGTTTCAAGATGCTGGAAAAGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCTGCAGAGAAACACTaGAGGTTTTCTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSAEKH*RFSDAV
Trigger: CACAGCATCAGAAAACCTTCAGTGTTTCTCTGCAGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATACAGGCCTAAATCCTaGAAAGGCAAAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEYRPKS*KGKGKI
Trigger: AATCTTCCCTTTGCCTTTTCAGGATTTAGGCCTGTA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTTTGGCTGGAAGCTaGGGAGCCAGCGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLILAGS*GASEAR
Trigger: CCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAAT...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACGTGCTCGGGGACGGTaGCCAGACTCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDERARGR*PDSRCS
Trigger: AGAACAGCGAGAGTCTGGGCACCGTCCCCGAGCACG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATGCAAGATCCGCTCGTaGTCGGGGACGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDECKIRS*SGTVPR
Trigger: TCTGGGCACCGTCCCCGAGCACGAGCGGATCTTGCA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTGGTATCAGTAACTTaGACCTTCAGTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALVSVT*TFSFSA
Trigger: TGCAGAAAAACTGAAGGTGCAAGTTACTGATACCAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCCATCAACTGTTTCATaGATATTCGACTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFPSTVS*IFDWGC
Trigger: GCAACCCCAGTCGAATATGCATGAAACAGTTGATGG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR GCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAAGATATTTACAAGCTTaGTCCAGGTGTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAARYLQA*SRCVVF
Trigger: AAACACAACACACCTGGAGCAAGCTTGTAAATATCT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTATATATTTCTCCTTCTaGTGCATGTCGAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFIYFSF*CMSSIL
Trigger: AAGGATGCTCGACATGCAGCAGAAGGAGAAATATAT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELSSSI*IKDVDR
Trigger: TCTGTCAACATCCTTAATGCAGATGCTACTGGACAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGCTGAACAGCTCCCATaGTTATTTGTTTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFAEQLP*LFVLTH
Trigger: GTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp AGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCGCTGAACAGCTCCCATaGTTATTTGTTTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: SCLRSMNASCRVSPWNPGAEQLP*LFVLTH
Trigger: GTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGC...GCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGACTGGATTTATATTaGCATTTGGACCACGGAAAC +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFRLDLY*HLDHGN
Trigger: GTTTCCGTGGTCCAAATGGCAATATAAATCCAGTCT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCATTCCACTTCAGTTaGACTGACCTCAGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSFHFS*TDLSVP
Trigger: AGGAACACTGAGGTCAGTGCAACTGAAGTGGAATGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671701.1
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTTCTTGTGCGCATTTaGTTGGTCATCATACACAGA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELLVRI*LVIIHR
Trigger: TCTGTGTATGATGACCAACCAAATGCGCACAAGAAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGCACTGACTGAGACATaGGGAATTTCTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFALTET*GISLGK
Trigger: CTTTCCCAAAGAAATTCCCCATGTCTCAGTCAGTGC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGAGTTCATTTGGTTTaGCTTGTTTCCACAATGAGG +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFRVHLV*LVSTMR
Trigger: CCTCATTGTGGAAACAAGCCAAACCAAATGAACTCT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATTGTGCGCATTTGGTTaGTCATCATACACAGACCTT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELCAFG*SSYTDL
Trigger: AAGGTCTGTGTATGATGACCAACCAAATGCGCACAA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCAATTTCCTTGTCATaGTTACGGATACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSISLS*LRIQAS
Trigger: AGATGCTTGTATCCGTAATCATGACAAGGAAATTGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGAATTCTACATCGAATaGTATCTTCTGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFEFYIE*YLLCGL
Trigger: TAGTCCACACAGAAGATATCATTCGATGTAGAATTC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCAAGGTCTGGATCTTaGAAGGGAAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSRSGS*KGNLLM
Trigger: CATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTCGATCATTCTTCCTaGACTGAGCAAATATATTGT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLDHSS*TEQIYC
Trigger: ACAATATATTTGCTCAGTTCAGGAAGAATGATCGAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp AGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCCTCGATCATTCTTCCTaGACTGAGCAAATATATTGT +
Preference number: 4 (lower is better)
Translates to: SCLRSMNASCRVSPWNPGLDHSS*TEQIYC
Trigger: ACAATATATTTGCTCAGTTCAGGAAGAATGATCGAG...GCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTACCATATCAGACATaGTTGAATTCCAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLPYQT*LNSKAI
Trigger: TATGGCTTTGGAATTCAATCATGTCTGATATGGTAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATCGTGCTCGGGGACGGTaGCCAGACTCTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KLLGENLLGNRTHILLINRARGR*PDSRCS
Trigger: AGAACAGCGAGAGTCTGGGCACCGTCCCCGAGCACG...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCCATAAACTTCTTGTaGGCATTTGGTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESINFL*AFGWSS
Trigger: TGATGACCAACCAAATGCGCACAAGAAGTTTATGGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTTGGTATCAGTAACTTaGACCTTCAGTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLVSVT*TFSFSA
Trigger: TGCAGAAAAACTGAAGGTGCAAGTTACTGATACCAA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTGTGCCTGTTTCATTaGTGTTTCACCTATTTTGTC +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELCLFH*CFTYFV
Trigger: GACAAAATAGGTGAAACAGCAATGAAACAGGCACAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTATATTCGACTGGGGTTaGAATACCAGTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFIFDWG*NTSLAC
Trigger: ACAAGCAAGACTGGTATTGCAACCCCAGTCGAATAT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCAAGATCAGGATCAGTaGAATAGGATGAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFQDQDQ*NRMNEL
Trigger: GAGCTCATTCATCCTATTGCACTGATCCTGATCTTG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATTCTTTGGGAAAGACTaGTTTTCAAGGTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEFFGKD*FSRSGS
Trigger: AGATCCAGACCTTGAAAAGCAGTCTTTCCCAAAGAA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAATATATTTCTCCTTCTaGTGCATGTCGAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEIYFSF*CMSSIL
Trigger: AAGGATGCTCGACATGCAGCAGAAGGAGAAATATAT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLSSSI*IKDVDR
Trigger: TCTGTCAACATCCTTAATGCAGATGCTACTGGACAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGCTGAACAGCTCCCATaGTTATTTGTTTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEAEQLP*LFVLTH
Trigger: GTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCAGAATAGTACCTTTTaGCACTCATCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFQNSTF*HSSVLS
Trigger: TGAAAGAACAGATGAGTGCCAAAAGGTACTATTCTG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCATGCATATTCGACTaGGGTTGCAATACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSCIFD*GCNTSL
Trigger: AAGACTGGTATTGCAACCCCAGTCGAATATGCATGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTGCTTTTCAAGGTCTaGATCTTGAAAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLLFKV*ILKGKF
Trigger: AAATTTCCCTTTCAAGATCCAGACCTTGAAAAGCAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAATCCCCCTGGAATCCTaGCACAGGCTCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEIPLES*HRLRAG
Trigger: GCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGAT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAATTTATATTGCCATTTaGACCACGGAAACATACACA +
Preference number: 4 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAIYIAI*TTETYT
Trigger: TGTGTATGTTTCCGTGGTCCAAATGGCAATATAAAT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGCTCCGCCATTTTGGCTaGAAGCTGAGGAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLLRHFG*KLRSQR
Trigger: TCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAG...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTTGTGCGCATTTGGTTaGTCATCATACACAGACCTT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLCAFG*SSYTDL
Trigger: AAGGTCTGTGTATGATGACCAACCAAATGCGCACAA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCAATTTCCTTGTCATaGTTACGGATACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESISLS*LRIQAS
Trigger: AGATGCTTGTATCCGTAATCATGACAAGGAAATTGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGAATTCTACATCGAATaGTATCTTCTGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEEFYIE*YLLCGL
Trigger: TAGTCCACACAGAAGATATCATTCGATGTAGAATTC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGAAGATTTTCTATCATaGGCTGACAAAACCGGTATT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEEDFLS*ADKTGI
Trigger: AATACCGGTTTTGTCAGCTCATGATAGAAAATCTTC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACAGATGCTGGCAGGCTaGCATGCAAGCTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEQMLAG*HASCLS
Trigger: GCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTCGATCATTCTTCCTaGACTGAGCAAATATATTGT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELDHSS*TEQIYC
Trigger: ACAATATATTTGCTCAGTTCAGGAAGAATGATCGAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGCACAGGCGGTGTCGGTaGTCTCGATCTCCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKHRRCR*SRSPAR
Trigger: TCTTGCAGGAGATCGAGAGCACCGACACCGCCTGTG...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCCATAAACTTCTTGTaGGCATTTGGTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSINFL*AFGWSS
Trigger: TGATGACCAACCAAATGCGCACAAGAAGTTTATGGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATTGGTATCAGTAACTTaGACCTTCAGTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELVSVT*TFSFSA
Trigger: TGCAGAAAAACTGAAGGTGCAAGTTACTGATACCAA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTGTGCCTGTTTCATTaGTGTTTCACCTATTTTGTC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLCLFH*CFTYFV
Trigger: GACAAAATAGGTGAAACAGCAATGAAACAGGCACAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp CTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACCAAACTTCTTTGGGAAAGACTaGTTTTCAAGGTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LSASHVRSTCAGTYHSPNFFGKD*FSRSGS
Trigger: AGATCCAGACCTTGAAAAGCAGTCTTTCCCAAAGAA...GTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAAGATATTTACAAGCTTaGTCCAGGTGTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPERYLQA*SRCVVF
Trigger: AAACACAACACACCTGGAGCAAGCTTGTAAATATCT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCAATATATTTCTCCTTCTaGTGCATGTCGAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSIYFSF*CMSSIL
Trigger: AAGGATGCTCGACATGCAGCAGAAGGAGAAATATAT...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGCTGAACAGCTCCCATaGTTATTTGTTTTAACTCAC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFAEQLP*LFVLTH
Trigger: GTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTAGACTGGATTTATATTaGCATTTGGACCACGGAAAC +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFRLDLY*HLDHGN
Trigger: GTTTCCGTGGTCCAAATGGCAATATAAATCCAGTCT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTGCTTTTCAAGGTCTaGATCTTGAAAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELLFKV*ILKGKF
Trigger: AAATTTCCCTTTCAAGATCCAGACCTTGAAAAGCAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTAGAGTTCATTTGGTTTaGCTTGTTTCCACAATGAGG +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFRVHLV*LVSTMR
Trigger: CCTCATTGTGGAAACAAGCCAAACCAAATGAACTCT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTATTTATATTGCCATTTaGACCACGGAAACATACACA +
Preference number: 4 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFIYIAI*TTETYT
Trigger: TGTGTATGTTTCCGTGGTCCAAATGGCAATATAAAT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGGGAGCTAGGGTACCCTaGAGAATGGCTGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLGARVP*RMAASR
Trigger: TCTGGAAGCAGCCATTCTCCAGGGTACCCTAGCTCC...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGAATTCTACATCGAATaGTATCTTCTGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFEFYIE*YLLCGL
Trigger: TAGTCCACACAGAAGATATCATTCGATGTAGAATTC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGAAGATTTTCTATCATaGGCTGACAAAACCGGTATT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFEDFLS*ADKTGI
Trigger: AATACCGGTTTTGTCAGCTCATGATAGAAAATCTTC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTAGATATTTACAAGCTTaGTCCAGGTGTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFRYLQA*SRCVVF
Trigger: AAACACAACACACCTGGAGCAAGCTTGTAAATATCT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATTTGGTGTCACTGAGTaGAAGCCATGTGAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: SRPIPNHKQVKELSEVNEFGVTE*KPCEVY
Trigger: GTAGACCTCACATGGCTTGCACTCAGTGACACCAAA...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTGCTTTTCAAGGTCTaGATCTTGAAAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLLFKV*ILKGKF
Trigger: AAATTTCCCTTTCAAGATCCAGACCTTGAAAAGCAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp CTGTTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAAGATGTTGACAGATGCTaGCAGGCTGACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LFHDCLYQLLFVSIILPEDVDRC*QADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATC...TTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp CACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGAGCAGTAAGGGCTGTGTTTaGATTCACCCGAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: HDCLYQLLFVSIILPELSSKGCV*IHPKVL
Trigger: AAGTACCTTCGGGTGAATCCAAACACAGCCCTTACT...GCTCAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGCCATACGGGCCAGGCTaGTCTCAAACTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLPYGPG*SQTLEL
Trigger: AAGCTCAAGAGTTTGAGACCAGCCTGGCCCGTATGG...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp CACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGAGCGCACAGGCTCAGAGCTaGCAAACATTTCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: HDCLYQLLFVSIILPELSAQAQS*QTFQLK
Trigger: TTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGC...GCTCAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp AGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATGCCAAGATCAGGATCAGTaGAATAGGATGAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPIPNHKQVKELSEVNECQDQDQ*NRMNEL
Trigger: GAGCTCATTCATCCTATTGCACTGATCCTGATCTTG...GCATTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGTGTTCTCCGCCATTTTaGCTGGAAGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKCSPPF*LEAEEP
Trigger: TGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACA...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATCAAGGTCTGGATCTTaGAAGGGAAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SRPIPNHKQVKELSEVNESRSGS*KGNLLM
Trigger: CATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGA...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGACATGCAAGCTGTCTaGGCAACTTTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEDMQAV*ATFPGK
Trigger: TTTGCCTGGGAAAGTTGCTCAGACAGCTTGCATGTC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGGCAGTTCGAAAGACTaGATCTCAGCCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEGSSKD*ISARTF
Trigger: GAATGTCCTGGCTGAGATTCAGTCTTTCGAACTGCC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR GCA 90 bp GAATCCTGGCACAGGCTCAGAGCTGGCAAACATTTCAGCTTAAAAGCTTATAAAATATTCGACTGGGGTTaGAATACCAGTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESWHRLRAGKHFSLKAYKIFDWG*NTSLAC
Trigger: ACAAGCAAGACTGGTATTGCAACCCCAGTCGAATAT...TTTATAAGCTTTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp GAATCCTGGCACAGGCTCAGAGCTGGCAAACATTTCAGCTTAAAAGCTTATAAACTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: ESWHRLRAGKHFSLKAYKLSSSI*IKDVDR
Trigger: TCTGTCAACATCCTTAATGCAGATGCTACTGGACAG...TTTATAAGCTTTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGTGGTAACTTCTGTGTaGAGGAACCATCTACCCTCG +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEVVTSV*RNHLPS
Trigger: CGAGGGTAGATGGTTCCTGCACACAGAAGTTACCAC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGCTCAGACTCCCAAAGTaGCGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKLRLPK*RDYKHE
Trigger: CTCATGCTTGTAATCCCGGCACTTTGGGAGTCTGAG...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTGAGGTCTCCCTATATTaGCCACGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLEVSLY*PRWSQT
Trigger: AGTTTGAGACCAGCGTGGGCAATATAGGGAGACCTC...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTTGTGCGCATTTGGTTaGTCATCATACACAGACCGG +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLLCAFG*SSYTDR
Trigger: CCGGTCTGTGTATGATGACCAACCAAATGCGCACAA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp GAATCCTGGCACAGGCTCAGAGCTGGCAAACATTTCAGCTTAAAAGCTTATAAATCATGCATATTCGACTaGGGTTGCAATACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ESWHRLRAGKHFSLKAYKSCIFD*GCNTSL
Trigger: AAGACTGGTATTGCAACCCCAGTCGAATATGCATGA...TTTATAAGCTTTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp CTGTTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAAGCACTGACTGAGACATaGGGAATTTCTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LFHDCLYQLLFVSIILPEALTET*GISLGK
Trigger: CTTTCCCAAAGAAATTCCCCATGTCTCAGTCAGTGC...TTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGATGTTGACAGATGCTaGCAGGCTGACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEDVDRC*QADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp AGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATGCAGATATTTACAAGCTTaGTCCAGGTGTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RPIPNHKQVKELSEVNECRYLQA*SRCVVF
Trigger: AAACACAACACACCTGGAGCAAGCTTGTAAATATCT...GCATTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAAGGATGTTGACAGATaGTGGCAGGCTGACATGCAA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEKDVDR*WQADMQ
Trigger: TTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp CTGTTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAAAGCTACTCAAAGTTCTaGTCAGCAGCAGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFHDCLYQLLFVSIILPESYSKF*SAADLL
Trigger: CAACAAATCTGCTGCTGACCAGAACTTTGAGTAGCT...TTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAACTAGCTCTTCCATCTaGCTCAGACATTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDETSSSI*LRHCPV
Trigger: GACTGGACAATGTCTGAGCCAGATGGAAGAGCTAGT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGCACAGGCTCAGAGCTaGCAAACAATTCACACTGTA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEAQAQS*QTIHTV
Trigger: TACAGTGTGAATTGTTTGCCAGCTCTGAGCCTGTGC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTCTTTTCCAGCATCTTaGAACCTTCGGTTGGTATCA +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLSFPAS*NLRLVS
Trigger: TGATACCAACCGAAGGTTTCAAGATGCTGGAAAAGA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAACTGCTTTTCAAGGTCTaGATCTTGAAAGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SRPIPNHKQVKELSEVNELLFKV*ILKGKF
Trigger: AAATTTCCCTTTCAAGATCCAGACCTTGAAAAGCAG...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATATATTCTTCTTCATTaGCAACAGGGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEYILLH*QQGWGC
Trigger: ACAGCCCCATCCCTGTTGTCAATGAAGAAGAATATA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATCAAGGTCTGGATCTTaGAAGGGAAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDESRSGS*KGNLLM
Trigger: CATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGTAAATATGAGGCACTaGCTGAGACATGGGGAATTT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEVNMRH*LRHGEF
Trigger: AAATTCCCCATGTCTCAGTCAGTGCCTCATATTTAC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATACAGGCCTAAATCCTaGAAAGGCAAAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEYRPKS*KGKGKI
Trigger: AATCTTCCCTTTGCCTTTTCAGGATTTAGGCCTGTA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGCAACATGTAGCACAATaGAGCAGGACATACACACAT +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKQHVAQ*SRTYTH
Trigger: ATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTG...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGGATAAAACTACTGGGTaGAAACCTGTTAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLDKTTG*KPVRKQ
Trigger: CTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATC...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTCTTCTTGTGCGCATTTaGTTGGTCATCATACACAGA +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLLLVRI*LVIIHR
Trigger: TCTGTGTATGATGACCAACCAAATGCGCACAAGAAG...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACTTCTTGTGCGCATTTaGTTGGTCATCATACACAGA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELLVRI*LVIIHR
Trigger: TCTGTGTATGATGACCAACCAAATGCGCACAAGAAG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATCATGCATATTCGACTaGGGTTGCAATACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDESCIFD*GCNTSL
Trigger: AAGACTGGTATTGCAACCCCAGTCGAATATGCATGA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR TCA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGACACAGGAATTGGCTTaGGAAGTTTCTCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLTQELA*EVSLVK
Trigger: TTTAACAAGAGAAACTTCTCAAGCCAATTCCTGTGT...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGTCCATAAACTTCTTGTaGGCATTTGGTTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKSINFL*AFGWSS
Trigger: TGATGACCAACCAAATGCGCACAAGAAGTTTATGGA...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATTCTTTGGGAAAGACTaGTTTTCAAGGTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEFFGKD*FSRSGS
Trigger: AGATCCAGACCTTGAAAAGCAGTCTTTCCCAAAGAA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAATATATTTCTCCTTCTaGTGCATGTCGAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEIYFSF*CMSSIL
Trigger: AAGGATGCTCGACATGCAGCAGAAGGAGAAATATAT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAGACTGGATTTATATTaGCATTTGGACCACGGAAAC +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDERLDLY*HLDHGN
Trigger: GTTTCCGTGGTCCAAATGGCAATATAAATCCAGTCT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACAAACAAATCCAGAATaGGGTCACCTACAAGCAATA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEQTNPE*GHLQAI
Trigger: TATTGCTTGTAGGTGACCCCATTCTGGATTTGTTTG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAGAGTTCATTTGGTTTaGCTTGTTTCCACAATGAGG +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDERVHLV*LVSTMR
Trigger: CCTCATTGTGGAAACAAGCCAAACCAAATGAACTCT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTCAAAGACACAGGAATTaGCTTGAGAAGTTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLQRHRN*LEKFLL
Trigger: CAAGAGAAACTTCTCAAGCCAATTCCTGTGTCTTTG...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTGAATTCTACATCGAATaGTATCTTCTGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLEFYIE*YLLCGL
Trigger: TAGTCCACACAGAAGATATCATTCGATGTAGAATTC...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGAATTCTACATCGAATaGTATCTTCTGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEEFYIE*YLLCGL
Trigger: TAGTCCACACAGAAGATATCATTCGATGTAGAATTC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACTCGATCATTCTTCCTaGACTGAGCAAATATATTGT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELDHSS*TEQIYC
Trigger: ACAATATATTTGCTCAGTTCAGGAAGAATGATCGAG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp TGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTATAAGTCGGCTATTTGTACTTaGTCAACATTACCAATCCTT +
Preference number: 4 (lower is better)
Translates to: CSTMKQDIHTSFTIGLYKSAICT*STLPIL
Trigger: AAGGATTGGTAATGTTGATCAAGTACAAATAGCCGA...CTTATACAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR TCA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATAACCTAAGGACAACATaGCTTTATAAGCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KLLGENLLGNRTHILLINNLRTT*LYKPPD
Trigger: ATCAGGAGGCTTATAAAGTCATGTTGTCCTTAGGTT...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp ATGATAAAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTTTGGTATCAGTAACTTaGACCTTCAGTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MIKLLGENLLGNRTHILLLVSVT*TFSFSA
Trigger: TGCAGAAAAACTGAAGGTGCAAGTTACTGATACCAA...AAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTTTATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR GCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAGATATTTACAAGCTTaGTCCAGGTGTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDERYLQA*SRCVVF
Trigger: AAACACAACACACCTGGAGCAAGCTTGTAAATATCT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACAGAATAGTACCTTTTaGCACTCATCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEQNSTF*HSSVLS
Trigger: TGAAAGAACAGATGAGTGCCAAAAGGTACTATTCTG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR TCA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATTCAATTTCCTTGTCATaGTTACGGATACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: KLLGENLLGNRTHILLINSISLS*LRIQAS
Trigger: AGATGCTTGTATCCGTAATCATGACAAGGAAATTGA...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp AAACTACTGGGTGAAAACCTGTTAGGAAACAGGACCCACATATTACTTATTAATAGAAGGAATGGTGAATaGGAAATAGGAAAGGTGATA +
Preference number: 4 (lower is better)
Translates to: KLLGENLLGNRTHILLINRRNGE*EIGKVI
Trigger: TATCACCTTTCCTATTTCCCATTCACCATTCCTTCT...ATTAATAAGTAATATGTGGGTCCTGTTTCCTAACAGGTTTTCACCCAGTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CCA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAAAAAGTCGGTTCACTaGAAAACCATAACCCATATT +
Preference number: 4 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEKKSVH*KTITHI
Trigger: AATATGGGTTATGGTTTTCCAGTGAACCGACTTTTT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS CCA 90 bp CGTGCTCGGGGACGGTGCCCAGACTCTCGCTGTTCTCCGCCATTTTaGCTGGAAGCTGAGGAGCCAGCGAGGCGCGGCGCCGCGGGAACG +
Preference number: 5 (lower is better)
Translates to: RARGRCPDSRCSPPF*LEAEEPARRGAAGT
Trigger: CGTTCCCGCGGCGCCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACAGCGAGAGTCTGGGCACCGTCCCCGAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371543.5
ENST00000443748.6
CDS CCA 90 bp CTCGGGGACGGTGCCCAGACTCTCGCTGTTCTCCGCCATTTTGGCTaGAAGCTGAGGAGCCAGCGAGGCGCGGCGCCGCGGGAACGACGG +
Preference number: 5 (lower is better)
Translates to: LGDGAQTLAVLRHFG*KLRSQRGAAPRERR
Trigger: CCGTCGTTCCCGCGGCGCCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACAGCGAGAGTCTGGGCACCGTCCCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS CCA 90 bp AGGAGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCAGAGCTGGCAAACAATTCACACTGT +
Preference number: 5 (lower is better)
Translates to: RSCLRSMNASCRVSP*NPGTGSELANNSHC
Trigger: ACAGTGTGAATTGTTTGCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
ENST00000672817.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTTGTGCGCATTTGGTaGGTCATCATACACAGACCG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLVRIW*VIIHRP
Trigger: CGGTCTGTGTATGATGACCAACCAAATGCGCACAAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACATATTCGACTGGGGTaGCAATACCAGTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAHIRLG*QYQSCL
Trigger: CAAGCAAGACTGGTATTGCAACCCCAGTCGAATATG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSALRM*TDAGRL
Trigger: CAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTGACAAAACCGGTATaGACTAACCCAGGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALTKPV*TNPGKV
Trigger: TACTTTCCCTGGGTTAGTCAATACCGGTTTTGTCAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESALRM*TDAGRL
Trigger: CAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAAAACAGGTCAAGGAGTaGTCTGAGGTCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAKQVKE*SEVNEC
Trigger: GCATTCATTGACCTCAGACAACTCCTTGACCTGTTT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS TCA 90 bp AGGCCCCTAATTTTCCAGCTGTGTTTCATTCCACTTCAGTTGCACTaGCCTCAGTGTTCCTCACACTTTACCAGGCATGCTCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: RPLIFQLCFIPLQLH*PQCSSHFTRHAPPQ
Trigger: CTGAGGTGGAGCATGCCTGGTAAAGTGTGAGGAACACTGAGGTCAGTGCAACTGAAGTGGAATGAAACACAGCTGGAAAATTAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCTCTTTTCCAGCATCTaGAAACCTTCGGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLFSSI*KPSVGI
Trigger: GATACCAACCGAAGGTTTCAAGATGCTGGAAAAGAG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACATATTCGACTGGGGTaGCAATACCAGTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEHIRLG*QYQSCL
Trigger: CAAGCAAGACTGGTATTGCAACCCCAGTCGAATATG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFGQQLS*RGPCSK
Trigger: TTTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTATATTCTTCTTCATaGACAACAGGGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALYSSS*TTGMGL
Trigger: CAGCCCCATCCCTGTTGTCAATGAAGAAGAATATAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTATCGTCTATTTCTGTaGAGCTCCGGTGTAGTGACT +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFYRLFL*SSGVVT
Trigger: AGTCACTACACCGGAGCTCAACAGAAATAGACGATA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSALRM*TDAGRL
Trigger: CAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp AGGTCAAGGAGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAAACAGGTCAAGGAGTaGTCTGAGGTCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: RSRSCLRSMNASCRVSPWKQVKE*SEVNEC
Trigger: GCATTCATTGACCTCAGACAACTCCTTGACCTGTTT...CCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACTCCTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACAGAGTTCATTTGGTTaGGCTTGTTTCCACAATGAG +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAQSSFG*ACFHNE
Trigger: CTCATTGTGGAAACAAGCCAAACCAAATGAACTCTG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTTGTGCGCATTTGGTaGGTCATCATACACAGACCT +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELVRIW*VIIHRP
Trigger: AGGTCTGTGTATGATGACCAACCAAATGCGCACAAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAFSINF*CAFGWS
Trigger: TGACCAACCAAATGCGCACAAGAAGTTTATGGAAAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTGTTGGTATCAGTAACTaGCACCTTCAGTTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFVGISN*HLQFFC
Trigger: GCAGAAAAACTGAAGGTGCAAGTTACTGATACCAAC...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTCTTTTCCAGCATCTaGAAACCTTCGGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELFSSI*KPSVGI
Trigger: GATACCAACCGAAGGTTTCAAGATGCTGGAAAAGAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTGACAAAACCGGTATaGACTAACCCAGGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELTKPV*TNPGKV
Trigger: TACTTTCCCTGGGTTAGTCAATACCGGTTTTGTCAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACATATTCGACTGGGGTaGCAATACCAGTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSHIRLG*QYQSCL
Trigger: CAAGCAAGACTGGTATTGCAACCCCAGTCGAATATG...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTTATATTCTTCTTCATaGACAACAGGGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFLYSSS*TTGMGL
Trigger: CAGCCCCATCCCTGTTGTCAATGAAGAAGAATATAA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATTCAAGGTCTGGATCTaGAAAGGGAAATTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAFKVWI*KGKFAD
Trigger: ATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGAA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAATWGIS*GKTAFQ
Trigger: TTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATATCGTCTATTTCTGTaGAGCTCCGGTGTAGTGACT +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEYRLFL*SSGVVT
Trigger: AGTCACTACACCGGAGCTCAACAGAAATAGACGATA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATGTGTTTATGATGATTaGTACCAGCTCTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAACVYDD*YQLCQT
Trigger: GGTTTGACAGAGCTGGTACAAATCATCATAAACACA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp AGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGAATCCTGGCACAGGCTCATGTGTTTATGATGATTaGTACCAGCTCTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: RSMNASCRVSPWNPGTGSCVYDD*YQLCQT
Trigger: GGTTTGACAGAGCTGGTACAAATCATCATAAACACA...TGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACATCTGGCTCAGACATaGTCCAGTCATAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEHLAQT*SSHNQQ
Trigger: TTGCTGATTATGACTGGACAATGTCTGAGCCAGATG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAAAACAGGTCAAGGAGTaGTCTGAGGTCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEKQVKE*SEVNEC
Trigger: GCATTCATTGACCTCAGACAACTCCTTGACCTGTTT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCATGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAACSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTCAGAGTTCATTTGGTTaGGCTTGTTTCCACAATGAG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFQSSFG*ACFHNE
Trigger: CTCATTGTGGAAACAAGCCAAACCAAATGAACTCTG...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAGATTTATATTGCCATTaGGACCACGGAAACATACAC +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAADLYCH*DHGNIH
Trigger: GTGTATGTTTCCGTGGTCCAAATGGCAATATAAATC...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCAAAGACTGGATTTATATaGCCATTTGGACCACGGAAA +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAAKTGFI*PFGPRK
Trigger: TTTCCGTGGTCCAAATGGCAATATAAATCCAGTCTT...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTTGTGCGCATTTGGTaGGTCATCATACACAGACCT +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLVRIW*VIIHRP
Trigger: AGGTCTGTGTATGATGACCAACCAAATGCGCACAAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTACTTCTTGTGCGCATTaGGTTGGTCATCATACACAG +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFTSCAH*VGHHTQ
Trigger: CTGTGTATGATGACCAACCAAATGCGCACAAGAAGT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFFSINF*CAFGWS
Trigger: TGACCAACCAAATGCGCACAAGAAGTTTATGGAAAA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTCTTTTCCAGCATCTaGAAACCTTCGGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLFSSI*KPSVGI
Trigger: GATACCAACCGAAGGTTTCAAGATGCTGGAAAAGAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCTGACAAAACCGGTATaGACTAACCCAGGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLTKPV*TNPGKV
Trigger: TACTTTCCCTGGGTTAGTCAATACCGGTTTTGTCAG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTATATCCTCACGGAGTTaGGGAAGATTTTCTATCATG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFISSRS*GRFSIM
Trigger: CATGATAGAAAATCTTCCCAAACTCCGTGAGGATAT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GACCCCTGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACTTTCCAAAAAGTCTTaGAGATCAGACATGGAGATT +
Preference number: 5 (lower is better)
Translates to: DPCGNFCVQEPSTLAQAALSKKS*RSDMEI
Trigger: AATCTCCATGTCTGATCTCAAAGACTTTTTGGAAAG...TGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp CTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCACCAAACGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSASHVRSTCAGTYHSPNGQQLS*RGPCSK
Trigger: TTTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...GTTTGGTGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFGQQLS*RGPCSK
Trigger: TTTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CAA 90 bp AGGTCAAGGAGTTGTCTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTGGTTCAAGGTCTGGATCTaGAAAGGGAAATTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: RSRSCLRSMNASCRVSPWFKVWI*KGKFAD
Trigger: ATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGAA...CCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAGACAACTCCTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFTWGIS*GKTAFQ
Trigger: TTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTGTGTTTATGATGATTaGTACCAGCTCTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFCVYDD*YQLCQT
Trigger: GGTTTGACAGAGCTGGTACAAATCATCATAAACACA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCATCTGGCTCAGACATaGTCCAGTCATAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFHLAQT*SSHNQQ
Trigger: TTGCTGATTATGACTGGACAATGTCTGAGCCAGATG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTAAACAGGTCAAGGAGTaGTCTGAGGTCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFKQVKE*SEVNEC
Trigger: GCATTCATTGACCTCAGACAACTCCTTGACCTGTTT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTCTATCAACTTCTGTTaGTCTCGATCATTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFSINFC*SRSFFL
Trigger: CAGGAAGAATGATCGAGACAAACAGAAGTTGATAGA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTTGCTCAAGATCAACATaGAATCATGGATTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFCSRST*NHGFGV
Trigger: GACACCAAATCCATGATTCAATGTTGATCTTGAGCA...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAAGACTGGATTTATATaGCCATTTGGACCACGGAAA +
Preference number: 5 (lower is better)
Translates to: CRNHLPSHKLHLKWLAPFKTGFI*PFGPRK
Trigger: TTTCCGTGGTCCAAATGGCAATATAAATCCAGTCTT...AAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEFSINF*CAFGWS
Trigger: TGACCAACCAAATGCGCACAAGAAGTTTATGGAAAA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGTTGGTATCAGTAACTaGCACCTTCAGTTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFVGISN*HLQFFC
Trigger: GCAGAAAAACTGAAGGTGCAAGTTACTGATACCAAC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAATATCCTCACGGAGTTaGGGAAGATTTTCTATCATG +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEISSRS*GRFSIM
Trigger: CATGATAGAAAATCTTCCCAAACTCCGTGAGGATAT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTTATATTCTTCTTCATaGACAACAGGGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFLYSSS*TTGMGL
Trigger: CAGCCCCATCCCTGTTGTCAATGAAGAAGAATATAA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPETWGIS*GKTAFQ
Trigger: TTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATGTGTTTATGATGATTaGTACCAGCTCTGTCAAACC +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPECVYDD*YQLCQT
Trigger: GGTTTGACAGAGCTGGTACAAATCATCATAAACACA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAATCTATCAACTTCTGTTaGTCTCGATCATTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPESINFC*SRSFFL
Trigger: CAGGAAGAATGATCGAGACAAACAGAAGTTGATAGA...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTCAGAGTTCATTTGGTTaGGCTTGTTTCCACAATGAG +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFQSSFG*ACFHNE
Trigger: CTCATTGTGGAAACAAGCCAAACCAAATGAACTCTG...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGATTTATATTGCCATTaGGACCACGGAAACATACAC +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEDLYCH*DHGNIH
Trigger: GTGTATGTTTCCGTGGTCCAAATGGCAATATAAATC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAAAGACTGGATTTATATaGCCATTTGGACCACGGAAA +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEKTGFI*PFGPRK
Trigger: TTTCCGTGGTCCAAATGGCAATATAAATCCAGTCTT...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS GCA 90 bp ACAGCTCCCATGCTTATTTGTTTTAACTCACTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGATGCTGGCAGGCTGACATGCAAGCT +
Preference number: 5 (lower is better)
Translates to: TAPMLICFNSLSSSI*IKDVDRCWQADMQA
Trigger: AGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAAAACAAATAAGCATGGGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAACTTTCCAAAAAGTCTTaGAGATCAGACATGGAGATT +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPELSKKS*RSDMEI
Trigger: AATCTCCATGTCTGATCTCAAAGACTTTTTGGAAAG...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TGTGGTAACTTCTGTGTGCAGGAACCATCTACCCTCGCACAAGCTGCACCTGAAGTTGCAATACCAGTCTaGCTTGTTTCTTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: CGNFCVQEPSTLAQAAPEVAIPV*LVSFFV
Trigger: AACAAAGAAAGAAACAAGCAAGACTGGTATTGCAAC...TTCAGGTGCAGCTTGTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTTCAAGGTCTGGATCTaGAAAGGGAAATTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFFKVWI*KGKFAD
Trigger: ATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGAA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFTWGIS*GKTAFQ
Trigger: TTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGT...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp GAATCCTGGCACAGGCTCAGAGCTGGCAAACATTTCAGCTTAAAAGCTTATAAATCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ESWHRLRAGKHFSLKAYKSALRM*TDAGRL
Trigger: CAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGA...TTTATAAGCTTTTAAGCTGAAATGTTTGCCAGCTCTGAGCCTGTGCCAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp GTGTCACTGAGTGCAAGCCATGTGAGGTCTACATGTGCTGGGACATACCATTCATCTATCAACTTCTGTTaGTCTCGATCATTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VSLSASHVRSTCAGTYHSSINFC*SRSFFL
Trigger: CAGGAAGAATGATCGAGACAAACAGAAGTTGATAGA...TGAATGGTATGTCCCAGCACATGTAGACCTCACATGGCTTGCACTCAGTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTTCTATCAACTTCTGTTaGTCTCGATCATTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFSINFC*SRSFFL
Trigger: CAGGAAGAATGATCGAGACAAACAGAAGTTGATAGA...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCGCACAAGCTGCACCTGAAGTGGTTAGCCCCATTTAGTTCCTGTCCTCTCTTTGTTGCAATACCAGTCTaGCTTGTTTCTTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SHKLHLKWLAPFSSCPLFVAIPV*LVSFFV
Trigger: AACAAAGAAAGAAACAAGCAAGACTGGTATTGCAAC...AAAGAGAGGACAGGAACTAAATGGGGCTAACCACTTCAGGTGCAGCTTGTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGCTTGTGCGCATTTGGTaGGTCATCATACACAGACCG +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLLVRIW*VIIHRP
Trigger: CGGTCTGTGTATGATGACCAACCAAATGCGCACAAG...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAATATCGTCTATTTCTGTaGAGCTCCGGTGTAGTGACT +
Preference number: 5 (lower is better)
Translates to: SRPIPNHKQVKELSEVNEYRLFL*SSGVVT
Trigger: AGTCACTACACCGGAGCTCAACAGAAATAGACGATA...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACTTGTGCGCATTTGGTaGGTCATCATACACAGACCG +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELVRIW*VIIHRP
Trigger: CGGTCTGTGTATGATGACCAACCAAATGCGCACAAG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260762.10
ENST00000443748.6
CDS-3UTR CAA 90 bp TTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGCATCTGGCTCAGACATaGTCCAGTCATAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: FHDCLYQLLFVSIILPELHLAQT*SSHNQQ
Trigger: TTGCTGATTATGACTGGACAATGTCTGAGCCAGATG...CAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS TCA 90 bp GAGCTGGCAAACAATTCACACTGTATGACATCTAAGTTAAACTGCTaGACAGCTCCCATGCTTATTTGTTTTAACTCACTGTCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: ELANNSHCMTSKLNC*TAPMLICFNSLSSS
Trigger: GCTACTGGACAGTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGCAGTTTAACTTAGATGTCATACAGTGTGAATTGTTTGCCAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000671701.1
ENST00000672817.1
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGACTTCTTGTGCGCATTaGGTTGGTCATCATACACAG +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLTSCAH*VGHHTQ
Trigger: CTGTGTATGATGACCAACCAAATGCGCACAAGAAGT...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGCTCTTTTCCAGCATCTaGAAACCTTCGGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLLFSSI*KPSVGI
Trigger: GATACCAACCGAAGGTTTCAAGATGCTGGAAAAGAG...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TTTCACGACTGTCTCTATCAACTTCTGTTTGTCTCGATCATTCTTCCTGAACTGTTATATTCTTCTTCATaGACAACAGGGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FHDCLYQLLFVSIILPELLYSSS*TTGMGL
Trigger: CAGCCCCATCCCTGTTGTCAATGAAGAAGAATATAA...CAGTTCAGGAAGAATGATCGAGACAAACAGAAGTTGATAGAGACAGTCGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp AGTAGACCAATCCCAAACCATAAACAGGTCAAGGAGTTGTCTGAGGTCAATGAAACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: SRPIPNHKQVKELSEVNETWGIS*GKTAFQ
Trigger: TTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGT...TTCATTGACCTCAGACAACTCCTTGACCTGTTTATGGTTTGGGATTGGTCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS TCA 90 bp AGCAACACCTCATATTCACACTGTATGACATCTAAGTTAAACTGCTaGACAGCTCCCATGCTTATTTGTTTTAACTCACTGTCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: SNTSYSHCMTSKLNC*TAPMLICFNSLSSS
Trigger: GCTACTGGACAGTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGCAGTTTAACTTAGATGTCATACAGTGTGAATATGAGGTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGGTTGGTATCAGTAACTaGCACCTTCAGTTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLVGISN*HLQFFC
Trigger: GCAGAAAAACTGAAGGTGCAAGTTACTGATACCAAC...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGGACAGCAATTATCTTaGAGAGGGCCATGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEGQQLS*RGPCSK
Trigger: TTTGGAACATGGCCCTCTCAAAGATAATTGCTGTCC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGAAACCAACTCACCTTTaGGCACTCATCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLKPTHL*ALICSF
Trigger: GAAAGAACAGATGAGTGCCAAAAGGTGAGTTGGTTT...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLFSINF*CAFGWS
Trigger: TGACCAACCAAATGCGCACAAGAAGTTTATGGAAAA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATTATATTCTTCTTCATaGACAACAGGGATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELYSSS*TTGMGL
Trigger: CAGCCCCATCCCTGTTGTCAATGAAGAAGAATATAA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAATATCCTCACGGAGTTaGGGAAGATTTTCTATCATG +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEISSRS*GRFSIM
Trigger: CATGATAGAAAATCTTCCCAAACTCCGTGAGGATAT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAATTCAAGGTCTGGATCTaGAAAGGGAAATTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEFKVWI*KGKFAD
Trigger: ATCAGCAAATTTCCCTTTCAAGATCCAGACCTTGAA...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAGATTTATATTGCCATTaGGACCACGGAAACATACAC +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEDLYCH*DHGNIH
Trigger: GTGTATGTTTCCGTGGTCCAAATGGCAATATAAATC...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAAAAGACTGGATTTATATaGCCATTTGGACCACGGAAA +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDEKTGFI*PFGPRK
Trigger: TTTCCGTGGTCCAAATGGCAATATAAATCCAGTCTT...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS-3UTR CAA 90 bp TCAACATGTAGCACAATGAAGCAGGACATACACACATCTTTTACTATAGGTCTGTTCGGCTATTTGTACTaGATCAACATTACCAATCCT +
Preference number: 5 (lower is better)
Translates to: STCSTMKQDIHTSFTIGLFGYLY*INITNP
Trigger: AGGATTGGTAATGTTGATCAAGTACAAATAGCCGAA...CAGACCTATAGTAAAAGATGTGTGTATGTCCTGCTTCATTGTGCTACATGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371543.5
CDS-3UTR CAA 90 bp TCCAGAATGGGGTCACCTACAAGCAATATAGTTAGAAATATTAACCCTGATGAACTTTCCAAAAAGTCTTaGAGATCAGACATGGAGATT +
Preference number: 5 (lower is better)
Translates to: SRMGSPTSNIVRNINPDELSKKS*RSDMEI
Trigger: AATCTCCATGTCTGATCTCAAAGACTTTTTGGAAAG...TTCATCAGGGTTAATATTTCTAACTATATTGCTTGTAGGTGACCCCATTCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
CDS TCA 90 bp AGGCATAACTGCAATTTTTCTACTACAGTTGTAATATTTCTCTGCTaGATTCTACATCGAATGATATCTTCTGTGTGGACTATCACCTCT +
Preference number: 5 (lower is better)
Translates to: RHNCNFSTTVVIFLC*ILHRMISSVWTITS
Trigger: AGAGGTGATAGTCCACACAGAAGATATCATTCGATGTAGAATTCAGCAGAGAAATATTACAACTGTAGTAGAAAAATTGCAGTTATGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371543.5
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
ENST00000672817.1
CDS CCA 72 bp GGTGCCCAGACTCTCGCTGTTCTCCGCCATTTTGGCTaGAAGCTGAGGAGCCAGCGAGGCGCGGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: GAQTLAVLRHFG*KLRSQRGAAPR
Trigger: CCGCGGCGCCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACAGCGAGAGTCTGGGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371543.5
ENST00000443748.6
CDS CCA 72 bp GGACGGTGCCCAGACTCTCGCTGTTCTCCGCCATTTTaGCTGGAAGCTGAGGAGCCAGCGAGGCGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: GRCPDSRCSPPF*LEAEEPARRGA
Trigger: GGCGCCGCGCCTCGCTGGCTCCTCAGCTTCCAGCCAAAATGGCGGAGAACAGCGAGAGTCTGGGCACCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371543.5
ENST00000443748.6
CDS GCA 72 bp GCACTGACCTCAGTGTTCCTCACACTTTACCAGGCATaGTCCACCTCAGGGTTTATGCTCCTGCTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: ALTSVFLTLYQA*STSGFMLLLSP
Trigger: AGGGGAGAGCAGGAGCATAAACCCTGAGGTGGAGCATGCCTGGTAAAGTGTGAGGAACACTGAGGTCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671701.1
CDS CCA 72 bp CTGAGGTCAATGAATGCTAGCTGCAGGGTATCCCCCTaGAATCCTGGCACAGGCTCAGAGCTGGCAAACAAT +
Preference number: 6 (lower is better)
Translates to: LRSMNASCRVSP*NPGTGSELANN
Trigger: ATTGTTTGCCAGCTCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCTAGCATTCATTGACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000671701.1
ENST00000672817.1
CDS CCA 72 bp TCTAACTTTTCCATAAACTTCTTGTGCGCATTTGGTTaGTCATCATACACAGACCGGAGGGTGGGCCCCACA +
Preference number: 6 (lower is better)
Translates to: SNFSINFLCAFG*SSYTDRRVGPT
Trigger: TGTGGGGCCCACCCTCCGGTCTGTGTATGATGACCAACCAAATGCGCACAAGAAGTTTATGGAAAAGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371543.5
ENST00000443748.6
CDS CAA 72 bp TTAACTCACTGTCCAGTAGCATCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTGACATGCAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LTHCPVASALRM*TDAGRLTCKLS
Trigger: AGACAGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1
CDS TCA 72 bp ATTTTCCAGCTGTGTTTCATTCCACTTCAGTTGCACTaGCCTCAGTGTTCCTCACACTTTACCAGGCATGCT +
Preference number: 6 (lower is better)
Translates to: IFQLCFIPLQLH*PQCSSHFTRHA
Trigger: AGCATGCCTGGTAAAGTGTGAGGAACACTGAGGTCAGTGCAACTGAAGTGGAATGAAACACAGCTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671701.1
CDS TCA 72 bp TCTTCTGTGTGGACTATCACCTCTTTTCCAGCATCTTaGAACCTTCGGTTGGTATCAGTAACTTGCACCTTC +
Preference number: 6 (lower is better)
Translates to: SSVWTITSFPAS*NLRLVSVTCTF
Trigger: GAAGGTGCAAGTTACTGATACCAACCGAAGGTTTCAAGATGCTGGAAAAGAGGTGATAGTCCACACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371543.5
ENST00000371552.8
ENST00000443748.6
ENST00000671701.1
ENST00000672817.1
CDS CAA 90 bp TTATTTGTTTTAACTCACTGTCCAGTAGCATCTGCATTAAGGATGTaGACAGATGCTGGCAGGCTGACATGCAAGCTGTCTGAGCAACTT +
Preference number: 6 (lower is better)
Translates to: LFVLTHCPVASALRM*TDAGRLTCKLSEQL
Trigger: AAGTTGCTCAGACAGCTTGCATGTCAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAAAACAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1
CDS GCA 72 bp ATGCTTATTTGTTTTAACTCACTGTCCAGTAGCATCTaGATTAAGGATGTTGACAGATGCTGGCAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: MLICFNSLSSSI*IKDVDRCWQAD
Trigger: GTCAGCCTGCCAGCATCTGTCAACATCCTTAATGCAGATGCTACTGGACAGTGAGTTAAAACAAATAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1
CDS CAA 72 bp TTACGGATACAAGCATCTAACTTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCATCATACACAGACCGG +
Preference number: 6 (lower is better)
Translates to: LRIQASNFSINF*CAFGWSSYTDR
Trigger: CCGGTCTGTGTATGATGACCAACCAAATGCGCACAAGAAGTTTATGGAAAAGTTAGATGCTTGTATCCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260762.10
ENST00000371543.5
ENST00000443748.6
CDS CAA 72 bp AAATATGAGGCACTGACTGAGACATGGGGAATTTCTTaGGGAAAGACTGCTTTTCAAGGTCTGGATCTTGAA +
Preference number: 6 (lower is better)
Translates to: KYEALTETWGIS*GKTAFQGLDLE
Trigger: TTCAAGATCCAGACCTTGAAAAGCAGTCTTTCCCAAAGAAATTCCCCATGTCTCAGTCAGTGCCTCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1
CDS CAA 72 bp GTTCACTGGAAAACCATAACCCATATTCGACTGGGGTaGCAATACCAGTCTTGCTTGTTTCTTTCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: VHWKTITHIRLG*QYQSCLFLSLF
Trigger: AAACAAAGAAAGAAACAAGCAAGACTGGTATTGCAACCCCAGTCGAATATGGGTTATGGTTTTCCAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443748.6
CDS CAA 72 bp ATAGCCATCAACTGTTTCATGCATATTCGACTGGGGTaGCAATACCAGTCTTGCTTGTTTCTTTCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: IAINCFMHIRLG*QYQSCLFLSLF
Trigger: AAACAAAGAAAGAAACAAGCAAGACTGGTATTGCAACCCCAGTCGAATATGCATGAAACAGTTGATGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000671701.1
ENST00000672817.1
CDS CAA 72 bp TTACGGATACAAGCATCTAACTTTTCCATAAACTTCTaGTGCGCATTTGGTTGGTCATCATACACAGACCTT +
Preference number: 6 (lower is better)
Translates to: LRIQASNFSINF*CAFGWSSYTDL
Trigger: AAGGTCTGTGTATGATGACCAACCAAATGCGCACAAGAAGTTTATGGAAAAGTTAGATGCTTGTATCCGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371552.8
ENST00000671701.1
ENST00000672817.1
CDS CCA 72 bp TCTAACTTTTCCATAAACTTCTTGTGCGCATTTGGTTaGTCATCATACACAGACCTTAAAGTAGCTTCAACA +
Preference number: 6 (lower is better)
Translates to: SNFSINFLCAFG*SSYTDLKVAST
Trigger: TGTTGAAGCTACTTTAAGGTCTGTGTATGATGACCAACCAAATGCGCACAAGAAGTTTATGGAAAAGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371552.8
ENST00000671701.1
ENST00000672817.1
CDS TCA 72 bp AACAATTCACACTGTATGACATCTAAGTTAAACTGCTaGACAGCTCCCATGCTTATTTGTTTTAACTCACTG +
Preference number: 6 (lower is better)
Translates to: NNSHCMTSKLNC*TAPMLICFNSL
Trigger: CAGTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGCAGTTTAACTTAGATGTCATACAGTGTGAATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000458552.1
ENST00000671701.1
ENST00000672817.1
CDS TCA 72 bp TCATATTCACACTGTATGACATCTAAGTTAAACTGCTaGACAGCTCCCATGCTTATTTGTTTTAACTCACTG +
Preference number: 6 (lower is better)
Translates to: SYSHCMTSKLNC*TAPMLICFNSL
Trigger: CAGTGAGTTAAAACAAATAAGCATGGGAGCTGTTCAGCAGTTTAACTTAGATGTCATACAGTGTGAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495132.5
CDS TCA 72 bp TTTATGATGATTTGTACCAGCTCTGTCAAACCTATATaGGGTTTTCTAATAAGGTTCAGTAAACAGCTACTC +
Preference number: 6 (lower is better)
Translates to: FMMICTSSVKPI*GFLIRFSKQLL
Trigger: GAGTAGCTGTTTACTGAACCTTATTAGAAAACCTCATATAGGTTTGACAGAGCTGGTACAAATCATCATAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260762.10
ENST00000371552.8
ENST00000443748.6
ENST00000495132.5
ENST00000671701.1
ENST00000672817.1