RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000187609

Ensembl transcript IDs: ENST00000340951.9, ENST00000460390.6, ENST00000465160.2, ENST00000472958.5, ENST00000475006.1, ENST00000478344.6, ENST00000478350.1, ENST00000479452.5, ENST00000484392.5, ENST00000487745.5, ENST00000490886.5, ENST00000491734.6

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTaGAGCCGGGTGCCGTCGGCCAGCATGTCCGGTGTCTCCGCCCGC +
Preference number: 1 (lower is better)
Translates to: RSPGVLSTPTGTPAS*SRVPSASMSGVSAR
Trigger: GCGGGCGGAGACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp GTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAGCCGGGTaGCGTCGGCCAGCATGTCCGGTGTCTCCGCCCGCAGGTCAGCCA +
Preference number: 1 (lower is better)
Translates to: VSSAHPPGPLPAAAG*RRPACPVSPPAGQP
Trigger: TGGCTGACCTGCGGGCGGAGACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp GAAGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTaGCAGCTGCAGCCGGGTGCCGTCGGCCAGCATGTCCGGTGTCTC +
Preference number: 1 (lower is better)
Translates to: EAPQPRCPQHTHRDP*QLQPGAVGQHVRCL
Trigger: GAGACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp TGGCTGTCGGGGGCAGGGTCCCAGGGGCCACAGACGCGGATGTCCTaGTCAGTGACCAGGGTGGCACGGACAGGTGTCCAGGCAGCGAGG +
Preference number: 1 (lower is better)
Translates to: WLSGAGSQGPQTRMS*SVTRVARTGVQAAR
Trigger: CCTCGCTGCCTGGACACCTGTCCGTGCCACCCTGGTCACTGAGCAGGACATCCGCGTCTGTGGCCCCTGGGACCCTGCCCCCGACAGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR GCA 90 bp GGCTCCCAGCCAGGTCCTCCGACAGGTGGAAGCGGGCGGGCTCTCTaGACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCAG +
Preference number: 1 (lower is better)
Translates to: GSQPGPPTGGSGRAL*TGLGAPPAGSRRRQ
Trigger: CTGCCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAGGACCTGGCTGGGAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 90 bp CCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGCAGGAGTGACGGCCGAGGCCGGCCC +
Preference number: 1 (lower is better)
Translates to: PVGGCESARTSRRNT*PSTATCRSDGRGRP
Trigger: GGGCCGGCCTCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR TCA 90 bp CGACCTGGGCCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATaGTCCTCCCCTCCTGCCTGGCAACCTCGGCCGCCCTGCGGTGGT +
Preference number: 1 (lower is better)
Translates to: RPGPGACGMAAPTSE*SSPPAWQPRPPCGG
Trigger: ACCACCGCAGGGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp ACAGCCACAGGGACCTGCCTGGGTGCGGCCGGTGCTGACGCTTTCTaGAGGCCGGGTGGCTTCCGTGCCCCTGGTCTCTCTCTGTGCCTG +
Preference number: 1 (lower is better)
Translates to: TATGTCLGAAGADAF*RPGGFRAPGLSLCL
Trigger: CAGGCACAGAGAGAGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCCAGGCAGGTCCCTGTGGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp GACCTCGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTaGATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: DLGRPAVVFTIAQHA*IHTETAEAPCQPLQ
Trigger: CTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp GCACGCTCGCCACCCGCATCTGTCTGTGCACCAGCAGCAGGTCCATaGCGCCCAGAATCTGCTTCTCCACATGGGCCAGGGCGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ARSPPASVCAPAAGP*RPESASPHGPGRGR
Trigger: CCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGGGTGGCGAGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp AACCTCGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTaGATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCCT +
Preference number: 1 (lower is better)
Translates to: NLGRPAVVFTIAQHA*IHTETAEAPCQPLP
Trigger: AGGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp TGGCAACCTCGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATaGGTGCATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: WQPRPPCGGLHHCPA*VHPHRDSGGSVPAP
Trigger: AGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp CCTCCTGCCTGGCAACCTCGGCCGCCCTGCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGTG +
Preference number: 1 (lower is better)
Translates to: PPAWQPRPPCGGLHH*PACVHPHRDSGGSV
Trigger: CACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCAGGCAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 90 bp ATAGAGGGGTCCGAGAGGAGCTGGGCCACCAGCCGGGAAAAGGCCTaGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCC +
Preference number: 1 (lower is better)
Translates to: IEGSERSWATSREKA*APCPVGGCESARTS
Trigger: GGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCCCTCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp TCCGAGAGGAGCTGGGCCACCAGCCGGGAAAAGGCCTGGGCTCCCTaGCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAAC +
Preference number: 1 (lower is better)
Translates to: SERSWATSREKAWAP*PVGGCESARTSRRN
Trigger: GTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp AGAAGACCTCGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATaGGTGCATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: RRPRPPCGGLHHCPA*VHPHRDSGGSVPAP
Trigger: AGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp TCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTaGTGGCCGGGCTGGGGGCTGGGCTCGGCTCGCAGGGGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: SGTFHVYCLAVLRRD*WPGWGLGSARRGWG
Trigger: CCCCCAGCCCCTGCGAGCCGAGCCCAGCCCCCAGCCCGGCCAGCAGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 90 bp CCCAGCGTGGCTGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTaGACGTGTGCCAGCAGGCAGCTCCTGTCTGCATCCTGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: PSVAASLNLPSWWRR*TCASRQLLSASCSW
Trigger: CCAGCTGCAGGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGCCACGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp AACGTCGCGCCCAGCGTGGCTGCTTCTCTGAACCTGCCCTCGTGGTaGAGGCGGTGGACGTGTGCCAGCAGGCAGCTCCTGTCTGCATCC +
Preference number: 1 (lower is better)
Translates to: NVAPSVAASLNLPSW*RRWTCASRQLLSAS
Trigger: GGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGCCACGCTGGGCGCGACGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp GCTCGCAGGGGCTGGGGGCGCTCTCCAGCATGTCTCGGAAGTGGGTaGCAACACGACCCAGGTGGGAGCCGTCCCAGAAGACCTTTCCAC +
Preference number: 1 (lower is better)
Translates to: ARRGWGRSPACLGSG*QHDPGGSRPRRPFH
Trigger: GTGGAAAGGTCTTCTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGAGAGCGCCCCCAGCCCCTGCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 90 bp CTCGGCTCGCAGGGGCTGGGGGCGCTCTCCAGCATGTCTCGGAAGTaGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAGAAGACCTTT +
Preference number: 1 (lower is better)
Translates to: LGSQGLGALSSMSRK*VATRPRWEPSQKTF
Trigger: AAAGGTCTTCTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGAGAGCGCCCCCAGCCCCTGCGAGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR TCA 90 bp GGAGGGAGAGAGGAACAGGAGCTCAGCCCCCTTCTCCTGTCCCGATaGTGCCTCCTGACCCAGCGCGGGAGGGCCTCTCTAGAACACGCC +
Preference number: 1 (lower is better)
Translates to: GGREEQELSPLLLSR*CLLTQRGRASLEHA
Trigger: GGCGTGTTCTAGAGAGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAGGGGGCTGAGCTCCTGTTCCTCTCTCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR TCA 90 bp GCCCGGGACGGCCTGACGTCCAAGTCCAAGCCTGTGACTCTCCAGTaGGACAACCCTGGGGCTGTGTGGGGAATGGAGGCCGGGATCTGC +
Preference number: 1 (lower is better)
Translates to: ARDGLTSKSKPVTLQ*DNPGAVWGMEAGIC
Trigger: GCAGATCCCGGCCTCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGGAGAGTCACAGGCTTGGACTTGGACGTCAGGCCGTCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 90 bp GCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTaGCTGGGTCACTGTGGGAGACCAGCAGCTGAGACAGCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: AAPRAARVPWHTGRP*LGHCGRPAAETAAP
Trigger: AGGAGCAGCTGTCTCAGCTGCTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp CGCTGTCCAGGAGGGTGCCATGCCCAAAGGCGCGGGAGGCAAGGCTaGAAAGTCCAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTGGC +
Preference number: 1 (lower is better)
Translates to: RCPGGCHAQRRGRQG*KVQTLQRMPLGESG
Trigger: GCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 90 bp CTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGCTCCTGTCTaGATCCTGCAGCTGGAAGATGCTGGCCAGTGGTGCCGCAAGGCT +
Preference number: 1 (lower is better)
Translates to: LVVEAVDVCQQAAPV*ILQLEDAGQWCRKA
Trigger: AGCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp TGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCCACATaGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCCC +
Preference number: 1 (lower is better)
Translates to: CTSSRSMPPRICFST*ARAGQDVPSFCRSP
Trigger: GGGGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 90 bp GTGACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTGCTaGGCCTTCAGGGAGCAGTCGACCGAGAGGCAGCGCCCAGCCCCG +
Preference number: 1 (lower is better)
Translates to: VTRTLKCLSTALACC*AFREQSTERQRPAP
Trigger: CGGGGCTGGGCGCTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR TCA 90 bp TGCAGCATGTTGTCACACACCACACGGAAGGCCCTGGCCGGAATCTaGGGGGCAGCGCCCTCAGACACAGCCACAGCCACAGGGACCTGC +
Preference number: 1 (lower is better)
Translates to: CSMLSHTTRKALAGI*GAAPSDTATATGTC
Trigger: GCAGGTCCCTGTGGCTGTGGCTGTGTCTGAGGGCGCTGCCCCTCAGATTCCGGCCAGGGCCTTCCGTGTGGTGTGTGACAACATGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp CCCGGAGATGAGTGTGTGAGGAGACCTCAGCGCTGTCCAGGAGGGTaGCATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACC +
Preference number: 1 (lower is better)
Translates to: PGDECVRRPQRCPGG*HAQRRGRQGCKVQT
Trigger: GGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCGCTGAGGTCTCCTCACACACTCATCTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 90 bp GGCTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCAAGGAG +
Preference number: 1 (lower is better)
Translates to: GSSGATPYRSCRRKT*LLSAFGLSFSRLKE
Trigger: CTCCTTGAGCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp ATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTaGAGCATGTTGTCACACACCACACGGAAGGCCCTGGCCGGAATC +
Preference number: 1 (lower is better)
Translates to: MRASTPRQRRLRASP*SMLSHTTRKALAGI
Trigger: GATTCCGGCCAGGGCCTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp GCTTGGAACAGAAGACCTCGGCCGCCCTGCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGTG +
Preference number: 1 (lower is better)
Translates to: AWNRRPRPPCGGLHH*PACVHPHRDSGGSV
Trigger: CACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCTGTTCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp TGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTaGTGGGCCTTCAGGGAGCAGTCGACCGAGAGGCAGCGCCCAGCC +
Preference number: 1 (lower is better)
Translates to: WVTRTLKCLSTALAC*WAFREQSTERQRPA
Trigger: GGCTGGGCGCTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp GCGTGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTaGTGCTGGGCCTTCAGGGAGCAGTCGACCGAGAGGCAGCGCCCA +
Preference number: 1 (lower is better)
Translates to: AWVTRTLKCLSTALA*CWAFREQSTERQRP
Trigger: TGGGCGCTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp CACGACCCAGGTGGGAGCCGTCCCAGAAGACCTTTCCACAGCCCGTaGAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGCACACCCA +
Preference number: 1 (lower is better)
Translates to: HDPGGSRPRRPFHSP*SSRSTAAQVSSAHP
Trigger: TGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTCTTCTGGGACGGCTCCCACCTGGGTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 90 bp GGCTGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTCTGCATCCTGCAGCTGGAAGATGCT +
Preference number: 1 (lower is better)
Translates to: GCFSEPALVVEAVDV*QQAAPVCILQLEDA
Trigger: AGCATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 90 bp GAGACAACCCTGGGGCTGTGTGGGGAATGGAGGCCGGGATCTGCCTaGCAGTGGATGGGCCCTGGAGCCTTCACAGACCTTTCAGCTTGC +
Preference number: 1 (lower is better)
Translates to: ETTLGLCGEWRPGSA*QWMGPGAFTDLSAC
Trigger: GCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCCCAGGGTTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp CTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCAAGGAGGTCA +
Preference number: 1 (lower is better)
Translates to: LLGLRRTAPADARPA*SAPSDSASPGSRRS
Trigger: TGACCTCCTTGAGCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp CGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTT +
Preference number: 1 (lower is better)
Translates to: RICLCTSSRSMPPRI*FSTWARAGQDVPSF
Trigger: AAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp ATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGTaGCAGCCCCTGCAGCATGTTGTCACACACCACACGGAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: IAQHACIHTETAEAP*QPLQHVVTHHTEGP
Trigger: AGGGCCTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 90 bp CCTCCTGACCCAGCGCGGGAGGGCCTCTCTAGAACACGCCAGAGGTaGCCATGTGGACTCTCCTCCAATGACCTGGACCAGGCACTCTAC +
Preference number: 1 (lower is better)
Translates to: PPDPAREGLSRTRQR*PCGLSSNDLDQALY
Trigger: GTAGAGTGCCTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTCCCGCGCTGGGTCAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CCA 90 bp GTGTGGGGAATGGAGGCCGGGATCTGCCTGCCAGTGGATGGGCCCTaGAGCCTTCACAGACCTTTCAGCTTGCTTCACTCTCGGGGCACC +
Preference number: 1 (lower is better)
Translates to: VWGMEAGICLPVDGP*SLHRPFSLLHSRGT
Trigger: GGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 90 bp CTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTaGGTCACTGTGGGAGACCAGCAGCTGAGACAGCTGCTCCTGAAG +
Preference number: 1 (lower is better)
Translates to: LLGQQEFHGTLGGRD*VTVGDQQLRQLLLK
Trigger: CTTCAGGAGCAGCTGTCTCAGCTGCTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp CGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCATTCTCCTaGCTCAGCCTCCCCAGTAGCTGGGAATACAGGCGCCCGCCACCA +
Preference number: 1 (lower is better)
Translates to: RLQGSSSSTASKPFS*LSLPSSWEYRRPPP
Trigger: TGGTGGCGGGCGCCTGTATTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CCA 90 bp ACCCTGGGGCTGTGTGGGGAATGGAGGCCGGGATCTGCCTGCCAGTaGATGGGCCCTGGAGCCTTCACAGACCTTTCAGCTTGCTTCACT +
Preference number: 1 (lower is better)
Translates to: TLGLCGEWRPGSACQ*MGPGAFTDLSACFT
Trigger: AGTGAAGCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 90 bp CCTGACGTCCAAGTCCAAGCCTGTGACTCTCCAGTGAGACAACCCTaGGGCTGTGTGGGGAATGGAGGCCGGGATCTGCCTGCCAGTGGA +
Preference number: 1 (lower is better)
Translates to: PDVQVQACDSPVRQP*GCVGNGGRDLPASG
Trigger: TCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGGAGAGTCACAGGCTTGGACTTGGACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp AAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATaGCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGGCAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: KGAGGKAAKSRPSKG*PSGKVARQGERQLL
Trigger: GAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp GCAGTCACATGGCAGCTGGCAACGTCCTTGATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGGACCAGCAGCCTCCTCTGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: AVTWQLATSLMSKPG*HQESMRTSSLLWRS
Trigger: GGACCTCCAGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGCTGCCATGTGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp TCAGGTCTTCCCACGAGGCCAGGAGGTGGACGTTCTCCCTGGGGATaGGCAGCTGGTAGTAACGGTCCTTCATGTCCTTCACCTCCAGCC +
Preference number: 1 (lower is better)
Translates to: SGLPTRPGGGRSPWG*AAGSNGPSCPSPPA
Trigger: GGCTGGAGGTGAAGGACATGAAGGACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTGGGAAGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp GCGTGCAACGTGGTTACAGCCAAACACAGAGAGTCGGTGGGCAAATaGAGGAACAACGCATCAGCCAGGCGCAGTGGCCACGCCCGGAAT +
Preference number: 1 (lower is better)
Translates to: ACNVVTAKHRESVGK*RNNASARRSGHARN
Trigger: ATTCCGGGCGTGGCCACTGCGCCTGGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp AGGCTGCAAAGTCCAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTaGCCAGACAGGGTGAAAGGCAGCTTCTCTGTCCCTCGGGACTCT +
Preference number: 1 (lower is better)
Translates to: RLQSPDPPKDAPRGK*PDRVKGSFSVPRDS
Trigger: AGAGTCCCGAGGGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp GTCTGGTCAGGTCTTCCCACGAGGCCAGGAGGTGGACGTTCTCCCTaGGGATGGGCAGCTGGTAGTAACGGTCCTTCATGTCCTTCACCT +
Preference number: 1 (lower is better)
Translates to: VWSGLPTRPGGGRSP*GWAAGSNGPSCPSP
Trigger: AGGTGAAGGACATGAAGGACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTGGGAAGACCTGACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 90 bp CAAGGAGGTCACCTCAGGGTACCGTCTGTGCCTGGCCTGACGCTGTaGGGCTGCTGCCTGCTCCCTCTGATGAAAAGTCTTAGCAAGCTT +
Preference number: 1 (lower is better)
Translates to: QGGHLRVPSVPGLTL*GCCLLPLMKSLSKL
Trigger: AAGCTTGCTAAGACTTTTCATCAGAGGGAGCAGGCAGCAGCCGCACAGCGTCAGGCCAGGCACAGACGGTACCCTGAGGTGACCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 90 bp CTGACTGAGCGTGCAACGTGGTTACAGCCAAACACAGAGAGTCGGTaGGCAAATGCAGGAACAACGCATCAGCCAGGCGCAGTGGCCACG +
Preference number: 1 (lower is better)
Translates to: LTERATWLQPNTESR*ANAGTTHQPGAVAT
Trigger: CGTGGCCACTGCGCCTGGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 90 bp CAAACTCAGAAAGTGGAAGTGACTTGGAGGACAAGTGGAGGAGGATaGGCCCGGGACGGCCTGACGTCCAAGTCCAAGCCTGTGACTCTC +
Preference number: 1 (lower is better)
Translates to: QTQKVEVTWRTSGGG*ARDGLTSKSKPVTL
Trigger: GAGAGTCACAGGCTTGGACTTGGACGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 90 bp ACAGGCGTGAGCCACCATAATCCTGGCCGTGAGCCTGGCCAAGGCTaGAGTTTTAGGAGGAAAGGAATCTGTGAGCGCAGTGGACATTCG +
Preference number: 1 (lower is better)
Translates to: TGVSHHNPGREPGQG*SFRRKGICERSGHS
Trigger: CGAATGTCCACTGCGCTCACAGATTCCTTTCCTCCTAAAACTTCAGCCTTGGCCAGGCTCACGGCCAGGATTATGGTGGCTCACGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CCA 90 bp AATGAGGAAACAAACTCAGAAAGTGGAAGTGACTTGGAGGACAAGTaGAGGAGGATGGGCCCGGGACGGCCTGACGTCCAAGTCCAAGCC +
Preference number: 1 (lower is better)
Translates to: NEETNSESGSDLEDK*RRMGPGRPDVQVQA
Trigger: GGCTTGGACTTGGACGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAGTTTGTTTCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp CCTCCCCTCCCAGATGTCATCCCTCATATCTCACACACACACACATaGACACCTGCAGGCACACACACGTACACACACATGCATGCACAC +
Preference number: 1 (lower is better)
Translates to: PPLPDVIPHISHTHT*TPAGTHTYTHMHAH
Trigger: GTGTGCATGCATGTGTGTGTACGTGTGTGTGCCTGCAGGTGTGCATGTGTGTGTGTGTGAGATATGAGGGATGACATCTGGGAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 90 bp ACTCTGGACTCTGTGAGCAGCAAGCGACTGACTGAGCGTGCAACGTaGTTACAGCCAAACACAGAGAGTCGGTGGGCAAATGCAGGAACA +
Preference number: 1 (lower is better)
Translates to: TLDSVSSKRLTERAT*LQPNTESRWANAGT
Trigger: TGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGTCAGTCGCTTGCTGCTCACAGAGTCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 90 bp CTGCAGGCACACATGCACATGGGCACACACATACATGCACACACATaGACACACATGCACATGGCTTCCCTGAATCCATACAGGCACCAT +
Preference number: 1 (lower is better)
Translates to: LQAHMHMGTHIHAHT*THMHMASLNPYRHH
Trigger: ATGGTGCCTGTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCATGTATGTGTGTGCCCATGTGCATGTGTGCCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 90 bp CCCAGATGTCATCCCTCATATCTCACACACACACACATGCACACCTaGAGGCACACACACGTACACACACATGCATGCACACACAGACCT +
Preference number: 1 (lower is better)
Translates to: PRCHPSYLTHTHMHT*RHTHVHTHACTHRP
Trigger: AGGTCTGTGTGTGCATGCATGTGTGTGTACGTGTGTGTGCCTGCAGGTGTGCATGTGTGTGTGTGTGAGATATGAGGGATGACATCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 90 bp AAAGGAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATaGGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCA +
Preference number: 1 (lower is better)
Translates to: KGMDEQESSTVAMPA*EEPPRRIIFVLLRA
Trigger: TGCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
3UTR GCA 90 bp GAAAGAACAAAGGAATGGATGAACAAGAAAGCAGTACGGTTGCCATaGCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTC +
Preference number: 1 (lower is better)
Translates to: ERTKEWMNKKAVRLP*LHEKSHHGELFSFF
Trigger: GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTCCTTTGTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
3UTR GCA 90 bp ACTGCAGTGCTTGGAAGTAGCAAATACTTGTTATGTCAGAATCTGTaGTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGAAAATG +
Preference number: 1 (lower is better)
Translates to: TAVLGSSKYLLCQNL*FKASLLQKCSLQKM
Trigger: CATTTTCTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAACAAGTATTTGCTACTTCCAAGCACTGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR TCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCCCTCCCCTGGAGCCTaGACCGGCGGAGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRPSPGA*TGGVPQ
Trigger: CTGTGGAACTCCGCCGGTTCAGGCTCCAGGGGAGGG...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR GCA 90 bp CGCAGCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCAGGCCGGGATCTGCCTaGCAGTGGATGGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: RSRQPLLGQQEFHGTLGGRPGSA*QWMGPG
Trigger: TCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCT...GCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp GCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCATGGAGGCCGGGATCTaGCTGCCAGTGGATGGGCCC +
Preference number: 2 (lower is better)
Translates to: AGGLSAQGLVHLQQAVGVMEAGI*LPVDGP
Trigger: GGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCAT...GACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp CTCCAGCATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCACTCCGTGCCAGCCCCTaGCTGGGTGCGGCCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LQHVSEVGGNTTQVGAVPLRASP*LGAAGA
Trigger: AGCACCGGCCGCACCCAGGCAGGGGCTGGCACGGAG...TGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CAA 90 bp CCCTCCTGCCTGGCAACCTCGGCCGCCCTGCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGT +
Preference number: 2 (lower is better)
Translates to: PSCLATSAALRWSSP*PSMRASTPRQRRLR
Trigger: ACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCAGGCAGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR TCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCGGGTGCGGCCGGTGCTaGCGCTTTCTGCAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGGCGRC*RFLQAG
Trigger: CCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCC...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR GCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAACAGCCTTGGCCTGCTaGTGGGCCTTCAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: STAAQVSSAHPPGPLPAATALAC*WAFREQ
Trigger: CTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGT...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp CAGCAGCCTCCTCTGGAGGTCCGGGAAGCCGGCCACATAGCGCTCCACGAGGGCCTGAACCTGCCCTCGTaGTGGAGGCGGTGGACGTGT +
Preference number: 2 (lower is better)
Translates to: QQPPLEVREAGHIALHEGLNLPS*WRRWTC
Trigger: ACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAG...GCCCTCGTGGAGCGCTATGTGGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp CGCAGCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCGACTTGGAGGACAAGTaGAGGAGGATGGGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: RSRQPLLGQQEFHGTLGGDLEDK*RRMGPG
Trigger: TCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTC...GCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 90 bp CAGGTCCTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTaGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCAGCTGCGTAGAT +
Preference number: 2 (lower is better)
Translates to: QVLRQVEAGGLSAQG*VHLQQAVGVGSCVD
Trigger: ATCTACGCAGCTGCCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAGGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR GCA 90 bp TGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCACGCTGTCCAGGAGGGTaGCATGCCCAAAGGCGCGGG +
Preference number: 2 (lower is better)
Translates to: CFSEPALVVEAVDVCQQARCPGG*HAQRRG
Trigger: CCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCG...TGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp CACCAGGAATCCATGAGGACCAGCAGCCTCCTCTGGAGGTCCGGGAAGCCGGCCGCTCGGGCCTGCAGCTaGTTCAGCCTCAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: HQESMRTSSLLWRSGKPAARACS*FSLRLC
Trigger: GCACAGCCTGAGGCTGAAGCAGCTGCAGGCCCGAGC...GGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp AGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGATGATCCTCCCCTCCTaGCTGGCAACCTCGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SSRSTAAQVSSAHPPGPLMILPS*LATSAA
Trigger: GGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCAT...CAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTTCTACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp GGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCTGCCTGCCAGTGGATaGGCCCTGGAGCCTTCACAG +
Preference number: 2 (lower is better)
Translates to: GSGRALCTGLGAPPAGSRLPASG*ALEPSQ
Trigger: CTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAG...CCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp CCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACAAGTGGAGGAGGATaGGCCCGGGACGGCCTGACG +
Preference number: 2 (lower is better)
Translates to: PGLPALLVAARVPGRPEGTSGGG*ARDGLT
Trigger: CGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGT...TCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCCTTTCCACAGCCCGTaGAGCAGTAGAAGCACCGCA +
Preference number: 2 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRPFHSP*SSRSTA
Trigger: TGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGG...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGTGGGCCCGGAGCTTGTaGAATGGCTGCCCCGACGTC +
Preference number: 2 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARWARSL*NGCPDV
Trigger: GACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCA...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp GCTGCAGCCGGGTGCCGTCGGCCAGCATGTCCGGTGTCTCCGCCCGCAGGTCAGTCACAGTTACAGGCCTaGCAGCGGCTGAAGATGTCT +
Preference number: 2 (lower is better)
Translates to: AAAGCRRPACPVSPPAGQSQLQA*QRLKMS
Trigger: AGACATCTTCAGCCGCTGCCAGGCCTGTAACTGTGA...CTGACCTGCGGGCGGAGACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR TCA 90 bp AGACCTCAGCGCTGTCCAGGAGGGTGCCATGCCCAAAGGCGCGGGAGGCAAGGCAGTGGCCAGACAGGGTaGAAGGCAGCTTCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: RPQRCPGGCHAQRRGRQGSGQTG*KAASLS
Trigger: GGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACT...GCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCGCTGAGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp AACGCCAAGCTCCGACTGCAGCTTCAACGTCGCGCCCAGCGTGGCTGCTTCTCTTCCAGGAGGGTGCCATaGCCAAAGGCGCGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: NAKLRLQLQRRAQRGCFSSRRVP*PKAREA
Trigger: TGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGA...AGAGAAGCAGCCACGCTGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp AACGCCAAGCTCCGACTGCAGCTTCAACGTCGCGCCCAGCGTGGCTGCTTCTCTAGCCAGCACTGCAGCTaGTGGGAGATCCAGGCCGCC +
Preference number: 2 (lower is better)
Translates to: NAKLRLQLQRRAQRGCFSSQHCS*WEIQAA
Trigger: GGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCT...AGAGAAGCAGCCACGCTGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp CTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTCCAGTGGATGGGCCCTaGAGCCTTCACAGACCTTTC +
Preference number: 2 (lower is better)
Translates to: LGLRRTAPADARPACSAPPVDGP*SLHRPF
Trigger: GAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGG...AGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp GGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCCAGTGAGACAACCCTaGGGCTGTGTGGGGAATGGA +
Preference number: 2 (lower is better)
Translates to: GSGRALCTGLGAPPAGSRPVRQP*GCVGNG
Trigger: TCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGG...CCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCTCAGTCGCCCTCCCCTaGAGCCTGAACCGGCGGAGT +
Preference number: 2 (lower is better)
Translates to: LVALQECTLVSGQVFPRGSVALP*SLNRRS
Trigger: ACTCCGCCGGTTCAGGCTCCAGGGGAGGGCGACTGA...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CCA 90 bp TCCAGCATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAGTCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: SSMSRKWVATRPRWEPSQSRRNT*PSTATC
Trigger: GCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGA...CTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CAA 90 bp AGCTTGGAACAGAAGACCTCGGCCGCCCTGCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGT +
Preference number: 2 (lower is better)
Translates to: SLEQKTSAALRWSSP*PSMRASTPRQRRLR
Trigger: ACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCTGTTCCAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp TTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGCTCGCGGGAGGCAAGGCTaGAAAGTCCAGACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: FSEPALVVEAVDVCQQAARGRQG*KVQTLQ
Trigger: TTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCG...AGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCCAACCTCGGCCGCCCTaGGGTGGTCTTCACCATTGC +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGQPRPP*GGLHHC
Trigger: GCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTG...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCGGATCTGCCTGCCAGTaGATGGGCCCTGGAGCCTTC +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGGSACQ*MGPGAF
Trigger: GAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCC...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCATCTGCTTCTCCACATaGGCCAGGGCGGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGICFST*ARAGQD
Trigger: GTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGAT...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR TCA 90 bp TGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGGAATCCCAGCACTTTaGGAAGACGAGGCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: CFSEPALVVEAVDVCQQAGIPAL*EDEAGR
Trigger: TCGGCCTGCCTCGTCTTCTCAAAGTGCTGGGATTCC...TGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCAGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCA +
Preference number: 2 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPDARPA*SAPSDS
Trigger: TGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTC...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp CACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAGCATGTTGTCACACACTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: HTETAEAPCQPLQHVVTHWWLRE*QDVQKE
Trigger: TTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCA...GTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp CACTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTGGGCTGTGTGGGGAATaGAGGCCGGGATCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: HSTSTPTTWWHCRSAPSCGLCGE*RPGSAC
Trigger: GCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCC...ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGACCAGGCCCTGCACATaGTCGGTCCAGTTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARTRPCT*SVQFSC
Trigger: ACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGT...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCAGTTCCATGGCACACTaGGCGGCCGTGACTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGSSMAH*AAVTGS
Trigger: TGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACT...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CCA 90 bp CACTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTGCCTTGGCCTGCTGCTaGGCCTTCAGGGAGCAGTCG +
Preference number: 2 (lower is better)
Translates to: HSTSTPTTWWHCRSAPSCALACC*AFREQS
Trigger: CGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGC...ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CAA 90 bp ATGTCTGCGTGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTaGGCCTGCTGCTGGGCCTTCAGGGAGCAGTCGACCGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: MSAWVTRTLKCLSTA*ACCWAFREQSTERQ
Trigger: CTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCACGCAGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR TCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCAGGTCCAGTTCTCCTGTaGCAGGCTCTTCTGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPGPVLL*QALLGL
Trigger: TAGCCCCAGAAGAGCCTGTCACAGGAGAACTGGACC...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp GCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGGCAGACATACACACCTaGACAAACGAACACAATGCA +
Preference number: 2 (lower is better)
Translates to: AGSRSSGSKSSMAHWAAVADIHT*TNEHNA
Trigger: TGCATTGTGTTCGTTTGTGCAGGTGTGTATGTCTGC...CACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGWWLRE*QDVQKE
Trigger: TTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCA...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR GCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGMPPRI*FSTWAR
Trigger: CCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCAT...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR GCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCACCCGCATCTGTCTGTaGACCAGCAGCAGGTCCATG +
Preference number: 2 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGTRICL*TSSRSM
Trigger: CATGGACCTGCTGCTGGTGCACAGACAGATGCGGGT...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CCA 90 bp GGATGCTCATCTTTTCAACGCCAAGCTCCGACTGCAGCTTCAACGTCGCGCCCAAACCTGCCCTCGTGGTaGAGGCGGTGGACGTGTGCC +
Preference number: 2 (lower is better)
Translates to: GCSSFQRQAPTAASTSRPNLPSW*RRWTCA
Trigger: GGCACACGTCCACCGCCTCCACCACGAGGGCAGGTT...TGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCGTTCTCCCTGGGGATaGGCAGCTGGTAGTAACGGT +
Preference number: 2 (lower is better)
Translates to: LVALQECTLVSGQVFPRGRSPWG*AAGSNG
Trigger: ACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACG...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CCA 90 bp CAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTGCTCCTCCCCTCCTGCCTaGCAACCTCGGCCGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QQSGTFHVYCLAVLRRDCSSPPA*QPRPPC
Trigger: GCAGGGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGA...GCAGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGCCGGAGCTTGTGGAATaGCTGCCCCGACGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQPELVE*LPRRQN
Trigger: ATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGG...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR GCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCCAGACGCGGATGTCCTaGTCAGTGACCAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: RASLEHARGGHVDSPPMTQTRMS*SVTRVA
Trigger: TGCCACCCTGGTCACTGAGCAGGACATCCGCGTCTG...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR GCA 90 bp TCAGCTCCCTGGCCCTGTCCACGGCTGGGGCTGGCACGCTCGCCACCCGCATCTCATGTACACATCATATaGACGCAGACATACACACCT +
Preference number: 2 (lower is better)
Translates to: SAPWPCPRLGLARSPPASHVHII*TQTYTP
Trigger: AGGTGTGTATGTCTGCGTGCATATGATGTGTACATG...AGATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCCAGGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp GGAGGAGCAGTGGGATGCTCATCTTTTCAACGCCAAGCTCCGACTGCAGCTTCAGCAGCTGGAAGATGCTaGCCAGTGGTGCCGCAAGGC +
Preference number: 2 (lower is better)
Translates to: GGAVGCSSFQRQAPTAASAAGRC*PVVPQG
Trigger: GCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGC...TGAAGCTGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp CATAGCGCTCCACGAGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTTCTGCATCCTGCAGCTaGAAGATGCTGGCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: HSAPRGPPCPGGAVGCSSSASCS*KMLASG
Trigger: ACCACTGGCCAGCATCTTCCAGCTGCAGGATGCAGA...AGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGAGCGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CAA 90 bp TGCCTGCCAGTGGATGGGCCCTGGAGCCTTCACAGACCTTTCAGCTaGCTTCACTCTCGGGGCACCTTGACCAGATATAGAGCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: CLPVDGPWSLHRPFS*LHSRGTLTRYRAGS
Trigger: GCTTCCTGCTCTATATCTGGTCAAGGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR TCA 90 bp GATAACTGTAACCTCCGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCAGGATGTCCTGCTCAGTaGCCAGGGTGGCACGGACAG +
Preference number: 2 (lower is better)
Translates to: DNCNLRLQGSSSSTASKPGCPAQ*PGWHGQ
Trigger: CTGTCCGTGCCACCCTGGTCACTGAGCAGGACATCC...TGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR TCA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCACTCTCGGGGCACCTTaGCCAGATATAGAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLTLGAP*PDIEQE
Trigger: TTCCTGCTCTATATCTGGTCAAGGTGCCCCGAGAGT...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 90 bp CCCCATTGTGCGAATGAGGAAACAAACTCAGAAAGTGGAAGTGACTaGGAGGACAAGTGGAGGAGGATGGGCCCGGGACGGCCTGACGTC +
Preference number: 2 (lower is better)
Translates to: PHCANEETNSESGSD*EDKWRRMGPGRPDV
Trigger: GACGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAGTTTGTTTCCTCATTCGCACAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFEAVDV*QQAAPV
Trigger: GACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTC...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp CCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGGCAGCTTACTGAGCGTGCAACGTaGTTACAGCCAAACACAGAG +
Preference number: 2 (lower is better)
Translates to: PSKGCPSGKVARQGERQLTERAT*LQPNTE
Trigger: CTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGT...AAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp CACTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTGAGACCTTTAGGTACTaGTCACAGTTACAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: HSTSTPTTWWHCRSAPSCETFRY*SQLQAW
Trigger: CCAGGCCTGTAACTGTGACCAGTACCTAAAGGTCTC...ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR CCA 90 bp CCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTAGCATGTCTCGGAAGTaGGTGGCAACACGACCCAGG +
Preference number: 2 (lower is better)
Translates to: PSSRALSMFIVWLSSEGTSMSRK*VATRPR
Trigger: CCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCT...AGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR-3UTR TCA 90 bp GATAACTGTAACCTCCGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCATGGACTCTCCTCCAATaGCCTGGACCAGGCACTCTA +
Preference number: 2 (lower is better)
Translates to: DNCNLRLQGSSSSTASKPWTLLQ*PGPGTL
Trigger: TAGAGTGCCTGGTCCAGGTCATTGGAGGAGAGTCCA...TGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR GCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCTTGACCGCTCGGGCCTaGAGCTGCTTCAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: HACMRRATTENYFRSSKSLTARA*SCFSLR
Trigger: CCTGAGGCTGAAGCAGCTGCAGGCCCGAGCGGTCAA...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCCACAAACGAACACAATaGACACACAGATATACATGC +
Preference number: 2 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLHKRTQ*THRYTC
Trigger: GCATGTATATCTGTGTGTGCATTGTGTTCGTTTGTG...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGGGGCGGGGCAGGACGTaGCCAGTTTTTGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQGRGRT*PVFAGP
Trigger: GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCC...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCAACACAGAGAGTCGGTaGGCAAATGCAGGAACAACG +
Preference number: 2 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFNTESR*ANAGTT
Trigger: CGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTT...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp CCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGAGACCCTCCAAAGGATaGCCCTCGGGGAAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PPRRIIFVLLRAVNSFHSRPSKG*PSGKVA
Trigger: GGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCT...CGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR GCA 90 bp CCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGCCTGCAGCTGGAAGATaGTGGCCAGTGGTGCCGCAA +
Preference number: 2 (lower is better)
Translates to: PPRRIIFVLLRAVNSFHSPAAGR*WPVVPQ
Trigger: TTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGG...CGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGTCCCTGCCCTGTTGGTaGCTGCGAGAGTGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQSLPCW*LRECQD
Trigger: GTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGA...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGGTGCACCCTCGTGTCTaGTCAGGTCTTCCCACGAGG +
Preference number: 2 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQVHPRV*SGLPTR
Trigger: CCTCGTGGGAAGACCTGACCAGACACGAGGGTGCAC...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR GCA 90 bp CCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGGAGTCGGTGGGCAAATaGAGGAACAACGCATCAGCC +
Preference number: 2 (lower is better)
Translates to: PPRRIIFVLLRAVNSFHSESVGK*RNNASA
Trigger: GGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTC...CGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CCA 90 bp AGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGGGAGAAGAGCCAGCTGCAGTCACATaGCAGCTGGCAACGTCCTTG +
Preference number: 2 (lower is better)
Translates to: RIIFVLLRAVNSFHSGEEPAAVT*QLATSL
Trigger: CAAGGACGTTGCCAGCTGCCATGTGACTGCAGCTGG...CTCTTCTCCCGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CAA 90 bp ATTATATCCATTAGTTTGACTGCAGTGCTTGGAAGTAGCAAATACTaGTTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: IISISLTAVLGSSKY*LCQNLCFKASLLQK
Trigger: TTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAACAAGTATTTGCTACTTCCAAGCACTGCAGTCAAACTAATGGATATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp GGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTaGAGCCGGGTGCCGTCGGCCAGCATGTCCGGTGTC +
Preference number: 3 (lower is better)
Translates to: GVLSTPTGTPAS*SRVPSASMSGV
Trigger: GACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp GCCCCTCAGCTCCCTGGCCCTGTCCACGGCTGGGGCTaGCACGCTCGCCACCCGCATCTGTCTGTGCACCAG +
Preference number: 3 (lower is better)
Translates to: APQLPGPVHGWG*HARHPHLSVHQ
Trigger: CTGGTGCACAGACAGATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCCAGGGAGCTGAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 72 bp GGGCATGGCTGTGCCTGTAGCCAGCACTGCAGCTGGTaGGAGATCCAGGCCGCCAGGGAGGGGCCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: GHGCACSQHCSW*EIQAAREGPSP
Trigger: GGGAGAGGGCCCCTCCCTGGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCTACAGGCACAGCCATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp CGGGTGGCTTCCGTGCCCCTGGTCTCTCTCTGTGCCTaGGCCTCCGGCTCCCAGCCAGGTCCTCCGACAGGT +
Preference number: 3 (lower is better)
Translates to: RVASVPLVSLCA*ASGSQPGPPTG
Trigger: ACCTGTCGGAGGACCTGGCTGGGAGCCGGAGGCCCAGGCACAGAGAGAGACCAGGGGCACGGAAGCCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 72 bp GGGGCAGGGTCCCAGGGGCCACAGACGCGGATGTCCTaGTCAGTGACCAGGGTGGCACGGACAGGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: GAGSQGPQTRMS*SVTRVARTGVQ
Trigger: CTGGACACCTGTCCGTGCCACCCTGGTCACTGAGCAGGACATCCGCGTCTGTGGCCCCTGGGACCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CCA 72 bp GCGCCCAGCGTGGCTGCTTCTCTGAACCTGCCCTCGTaGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: APSVAASLNLPS*WRRWTCASRQL
Trigger: GAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGCCACGCTGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp TCCGAGAGGAGCTGGGCCACCAGCCGGGAAAAGGCCTaGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCC +
Preference number: 3 (lower is better)
Translates to: SERSWATSREKA*APCPVGGCESA
Trigger: GGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR TCA 72 bp AAGGAACACGTGGCCCTCCACGGCCACCTGCAGGAGTaGCGGCCGAGGCCGGCCCCCAGCAACAAACACAGG +
Preference number: 3 (lower is better)
Translates to: KEHVALHGHLQE*RPRPAPSNKHR
Trigger: CCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGGCCACGTGTTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR TCA 72 bp CCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATaGTCCTCCCCTCCTGCCTGGCAACCTCGGCCGCCC +
Preference number: 3 (lower is better)
Translates to: PGACGMAAPTSE*SSPPAWQPRPP
Trigger: GGGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 72 bp GGCCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAACACGTGGCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: GLGSLPCWWLRE*QDVQKEHVALH
Trigger: GTGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 72 bp CGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATaGGTGCATCCACACCGAGACAGCGGAGGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: RPPCGGLHHCPA*VHPHRDSGGSV
Trigger: CACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 72 bp GGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGCAGGAGTGACGGCCGA +
Preference number: 3 (lower is better)
Translates to: GCESARTSRRNT*PSTATCRSDGR
Trigger: TCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR-3UTR CAA 90 bp GCCTGGCTGTCGGGGGCAGGGTCCCAGGGGCCACAGACGCGGATGTCCTGCTCACTTGTGGAGCTGGCCTaGTTGACAGAGCTGGACACG +
Preference number: 3 (lower is better)
Translates to: AWLSGAGSQGPQTRMSCSLVELA*LTELDT
Trigger: CGTGTCCAGCTCTGTCAACAAGGCCAGCTCCACAAG...TGAGCAGGACATCCGCGTCTGTGGCCCCTGGGACCCTGCCCCCGACAGCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR CAA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGACCTGGGCCCGGAGCTaGTGGAATGGCTGCCCCGAC +
Preference number: 3 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARTWARS*WNGCPD
Trigger: GTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGT...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR GCA 72 bp GGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GATPYRSCRRKT*LLSAFGLSFSR
Trigger: CCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGGGCGGGGCAGGACGTG +
Preference number: 3 (lower is better)
Translates to: LCTSSRSMPPRI*FSTWARAGQDV
Trigger: CACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 72 bp CGCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTaGATCCACACCGAGACAGCGGAGGCTCCGTGCCAG +
Preference number: 3 (lower is better)
Translates to: RPAVVFTIAQHA*IHTETAEAPCQ
Trigger: CTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 72 bp GGCTCAAGGAGGTCACCTCAGGGTACCGTCTGTGCCTaGCCTGACGCTGTGCGGCTGCTGCCTGCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: GSRRSPQGTVCA*PDAVRLLPAPS
Trigger: AGAGGGAGCAGGCAGCAGCCGCACAGCGTCAGGCCAGGCACAGACGGTACCCTGAGGTGACCTCCTTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp AGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTaGGCGGCCGTGACTGGGTCACTGTGGGAGACCAGC +
Preference number: 3 (lower is better)
Translates to: SRSSGSKSSMAH*AAVTGSLWETS
Trigger: GCTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 72 bp CTCCCCTCCTGCCTGGCAACCTCGGCCGCCCTGCGGTaGTCTTCACCATTGCCCAGCATGCGTGCATCCACA +
Preference number: 3 (lower is better)
Translates to: LPSCLATSAALR*SSPLPSMRAST
Trigger: TGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCAGGCAGGAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp GGCTGGGGGCGCTCTCCAGCATGTCTCGGAAGTGGGTaGCAACACGACCCAGGTGGGAGCCGTCCCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GWGRSPACLGSG*QHDPGGSRPRR
Trigger: TCTTCTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGAGAGCGCCCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR TCA 72 bp GAGGAACAGGAGCTCAGCCCCCTTCTCCTGTCCCGATaGTGCCTCCTGACCCAGCGCGGGAGGGCCTCTCTA +
Preference number: 3 (lower is better)
Translates to: EEQELSPLLLSR*CLLTQRGRASL
Trigger: TAGAGAGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAGGGGGCTGAGCTCCTGTTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR GCA 72 bp TCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTCTGCATCCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: SEPALVVEAVDV*QQAAPVCILQL
Trigger: CAGCTGCAGGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp CTGGGGCTGTGTGGGGAATGGAGGCCGGGATCTGCCTaGCAGTGGATGGGCCCTGGAGCCTTCACAGACCTT +
Preference number: 3 (lower is better)
Translates to: LGLCGEWRPGSA*QWMGPGAFTDL
Trigger: AAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp GTGACAGGCTCTTCTGGGGCTACGCCGTACCGCTCCTaGAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGA +
Preference number: 3 (lower is better)
Translates to: VTGSSGATPYRS*RRKTCLLSAFG
Trigger: TCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAGCCTGTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp TCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTaGAGCATGTTGTCACACACCACACGGAAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: STPRQRRLRASP*SMLSHTTRKAL
Trigger: CAGGGCCTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp TGGCAACCTCGGCCGCCCTGCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCACACCGAGACAGCGGA +
Preference number: 3 (lower is better)
Translates to: WQPRPPCGGLHH*PACVHPHRDSG
Trigger: TCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp GCTGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTaGACGTGTGCCAGCAGGCAGCTCCTGTCTGCATCC +
Preference number: 3 (lower is better)
Translates to: AASLNLPSWWRR*TCASRQLLSAS
Trigger: GGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR TCA 72 bp CACCAGGCCCTGCACATGGTCGGTCCAGTTCTCCTGTaGCAGGCTCTTCTGGGGCTACGCCGTACCGCTCCT +
Preference number: 3 (lower is better)
Translates to: HQALHMVGPVLL*QALLGLRRTAP
Trigger: AGGAGCGGTACGGCGTAGCCCCAGAAGAGCCTGTCACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp CGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTaGCTGGGTCACTGTGGGAGACCAGCAGCTGAGACA +
Preference number: 3 (lower is better)
Translates to: RAARVPWHTGRP*LGHCGRPAAET
Trigger: TGTCTCAGCTGCTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR GCA 72 bp TGTGAGGAGACCTCAGCGCTGTCCAGGAGGGTGCCATaGCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: CEETSALSRRVP*PKAREARLQSP
Trigger: TGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCGCTGAGGTCTCCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp GAGTGTGTGAGGAGACCTCAGCGCTGTCCAGGAGGGTaGCATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAA +
Preference number: 3 (lower is better)
Translates to: ECVRRPQRCPGG*HAQRRGRQGCK
Trigger: TTTGCAGCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCGCTGAGGTCTCCTCACACACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp CTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: LRRTAPADARPA*SAPSDSASPGS
Trigger: TGAGCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CATGCGTGCATCCACACCGAGACAGCGGAGGCTCCGTaGCAGCCCCTGCAGCATGTTGTCACACACCACACG +
Preference number: 3 (lower is better)
Translates to: HACIHTETAEAP*QPLQHVVTHHT
Trigger: CGTGTGGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp AGAAGACCTCGGCCGCCCTGCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCACACCGAGACAGCGGA +
Preference number: 3 (lower is better)
Translates to: RRPRPPCGGLHH*PACVHPHRDSG
Trigger: TCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp GGTGGGAGCCGTCCCAGAAGACCTTTCCACAGCCCGTaGAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: GGSRPRRPFHSP*SSRSTAAQVSS
Trigger: TGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTCTTCTGGGACGGCTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp CCAGCGCGGGAGGGCCTCTCTAGAACACGCCAGAGGTaGCCATGTGGACTCTCCTCCAATGACCTGGACCAG +
Preference number: 3 (lower is better)
Translates to: PAREGLSRTRQR*PCGLSSNDLDQ
Trigger: CTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTCCCGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR CAA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCTGCTTGAGCACAGCCTaGGCCTGCTGCTGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLCLSTA*ACCWAF
Trigger: GAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCA...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR TCA 72 bp GGCCTGACGTCCAAGTCCAAGCCTGTGACTCTCCAGTaGGACAACCCTGGGGCTGTGTGGGGAATGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GLTSKSKPVTLQ*DNPGAVWGMEA
Trigger: GGCCTCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGGAGAGTCACAGGCTTGGACTTGGACGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTaGTGGGCCTTCAGGGAGCAGTCGACCGAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: RTLKCLSTALAC*WAFREQSTERQ
Trigger: CTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp CTGTGTGGGGAATGGAGGCCGGGATCTGCCTGCCAGTaGATGGGCCCTGGAGCCTTCACAGACCTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: LCGEWRPGSACQ*MGPGAFTDLSA
Trigger: AGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp ACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTGCTaGGCCTTCAGGGAGCAGTCGACCGAGAGGCAGCGC +
Preference number: 3 (lower is better)
Translates to: TLKCLSTALACC*AFREQSTERQR
Trigger: GCGCTGCCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR TCA 72 bp CAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTaGAAGGCAGCTTCTCTGTCCCTCGGGACTCTGGAC +
Preference number: 3 (lower is better)
Translates to: QRMPLGESGQTG*KAASLSLGTLD
Trigger: GTCCAGAGTCCCGAGGGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp GGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATaGCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: GGKAAKSRPSKG*PSGKVARQGER
Trigger: CCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp CACCTCAGGGTACCGTCTGTGCCTGGCCTGACGCTGTaGGGCTGCTGCCTGCTCCCTCTGATGAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: HLRVPSVPGLTL*GCCLLPLMKSL
Trigger: AAGACTTTTCATCAGAGGGAGCAGGCAGCAGCCGCACAGCGTCAGGCCAGGCACAGACGGTACCCTGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp ACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTaGTGCTGGGCCTTCAGGGAGCAGTCGACCGAGAGG +
Preference number: 3 (lower is better)
Translates to: TRTLKCLSTALA*CWAFREQSTER
Trigger: CCTCTCGGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CCA 72 bp TGGCAGCTGGCAACGTCCTTGATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGGACCAGCAGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: WQLATSLMSKPG*HQESMRTSSLL
Trigger: GAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp CAAGTCCAAGCCTGTGACTCTCCAGTGAGACAACCCTaGGGCTGTGTGGGGAATGGAGGCCGGGATCTGCCT +
Preference number: 3 (lower is better)
Translates to: QVQACDSPVRQP*GCVGNGGRDLP
Trigger: AGGCAGATCCCGGCCTCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGGAGAGTCACAGGCTTGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp GGTCTTCCCACGAGGCCAGGAGGTGGACGTTCTCCCTaGGGATGGGCAGCTGGTAGTAACGGTCCTTCATGT +
Preference number: 3 (lower is better)
Translates to: GLPTRPGGGRSP*GWAAGSNGPSC
Trigger: ACATGAAGGACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTGGGAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CCA 72 bp AGTCCAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTaGCCAGACAGGGTGAAAGGCAGCTTCTCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: SPDPPKDAPRGK*PDRVKGSFSVP
Trigger: AGGGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp ATGGAGGCCGGGATCTGCCTGCCAGTGGATGGGCCCTaGAGCCTTCACAGACCTTTCAGCTTGCTTCACTCT +
Preference number: 3 (lower is better)
Translates to: MEAGICLPVDGP*SLHRPFSLLHS
Trigger: AGAGTGAAGCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp AAAGTGGAAGTGACTTGGAGGACAAGTGGAGGAGGATaGGCCCGGGACGGCCTGACGTCCAAGTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: KVEVTWRTSGGG*ARDGLTSKSKP
Trigger: AGGCTTGGACTTGGACGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp AAGAGCTTGGAACAGAAGACCTCGGCCGCCCTGCGGTaGTCTTCACCATTGCCCAGCATGCGTGCATCCACA +
Preference number: 3 (lower is better)
Translates to: KSLEQKTSAALR*SSPLPSMRAST
Trigger: TGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCTGTTCCAAGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CAA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCGTGGAGCTGGCCTTGTaGACAGAGCTGGACACGAAC +
Preference number: 3 (lower is better)
Translates to: RASLEHARGGHVDSPPMTVELAL*TELDTN
Trigger: GTTCGTGTCCAGCTCTGTCAACAAGGCCAGCTCCAC...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR-3UTR CAA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCCACTCTCGGGGCACCTaGACCAGATATAGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLHSRGT*TRYRAG
Trigger: TCCTGCTCTATATCTGGTCAAGGTGCCCCGAGAGTG...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CAA 90 bp AGTAACGGTCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCCACAGACCTTTCAGCTaGCTTCACTCTCGGGGCACC +
Preference number: 3 (lower is better)
Translates to: SNGPSCPSPPASSQPQSPHRPFS*LHSRGT
Trigger: GGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGTG...GGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGACCGTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CAA 90 bp AGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTTTTCAACGCCAAGCAGGCAGGCCGATGGCTaGAGCTCAGGAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: RATLSWRSSGMLIFSTPSRQADG*SSGVQD
Trigger: GTCTTGAACTCCTGAGCTCAAGCCATCGGCCTGCCT...GCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp GTGGTTACAGCCAAACACAGAGAGTCGGTGGGCAAATaGAGGAACAACGCATCAGCCAGGCGCAGTGGCCAC +
Preference number: 3 (lower is better)
Translates to: VVTAKHRESVGK*RNNASARRSGH
Trigger: GTGGCCACTGCGCCTGGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp AGTGGGATGCTCATCTTTTCAACGCCAAGCTCCGACTaGAGCTTCAACGTCGCGCCCAGCGTGGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SGMLIFSTPSSD*SFNVAPSVAAS
Trigger: AGAAGCAGCCACGCTGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR GCA 72 bp GTACCGTCTGTGCCTGGCCTGACGCTGTGCGGCTGCTaGCTGCTCCCTCTGATGAAAAGTCTTAGCAAGCTT +
Preference number: 3 (lower is better)
Translates to: VPSVPGLTLCGC*LLPLMKSLSKL
Trigger: AAGCTTGCTAAGACTTTTCATCAGAGGGAGCAGGCAGCAGCCGCACAGCGTCAGGCCAGGCACAGACGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp CGGGACTCTGGACTCTGTGAGCAGCAAGCGACTGACTaGGCGTGCAACGTGGTTACAGCCAAACACAGAGAG +
Preference number: 3 (lower is better)
Translates to: RDSGLCEQQATD*ACNVVTAKHRE
Trigger: CTCTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGTCAGTCGCTTGCTGCTCACAGAGTCCAGAGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp CGTGCAACGTGGTTACAGCCAAACACAGAGAGTCGGTaGGCAAATGCAGGAACAACGCATCAGCCAGGCGCA +
Preference number: 3 (lower is better)
Translates to: RATWLQPNTESR*ANAGTTHQPGA
Trigger: TGCGCCTGGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CCA 72 bp ACAAACTCAGAAAGTGGAAGTGACTTGGAGGACAAGTaGAGGAGGATGGGCCCGGGACGGCCTGACGTCCAA +
Preference number: 3 (lower is better)
Translates to: TNSESGSDLEDK*RRMGPGRPDVQ
Trigger: TTGGACGTCAGGCCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp AACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATaGCCTGGACCAGGCACTCTACCTAAAAGGACAAAC +
Preference number: 3 (lower is better)
Translates to: NTPEVAMWTLLQ*PGPGTLPKRTN
Trigger: GTTTGTCCTTTTAGGTAGAGTGCCTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR TCA 72 bp AGCCACCATAATCCTGGCCGTGAGCCTGGCCAAGGCTaGAGTTTTAGGAGGAAAGGAATCTGTGAGCGCAGT +
Preference number: 3 (lower is better)
Translates to: SHHNPGREPGQG*SFRRKGICERS
Trigger: ACTGCGCTCACAGATTCCTTTCCTCCTAAAACTTCAGCCTTGGCCAGGCTCACGGCCAGGATTATGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CCA 72 bp TCTGTGAGCAGCAAGCGACTGACTGAGCGTGCAACGTaGTTACAGCCAAACACAGAGAGTCGGTGGGCAAAT +
Preference number: 3 (lower is better)
Translates to: SVSSKRLTERAT*LQPNTESRWAN
Trigger: ATTTGCCCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGTCAGTCGCTTGCTGCTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR-3UTR CAA 90 bp ATCACTGCACCTGTGAGTAAGGTGGTCACAAATGTGAACACCTGTCTAGAACATGGACGTGCCCAGTTTTaGCAGGTCCCCCACCATCCC +
Preference number: 3 (lower is better)
Translates to: ITAPVSKVVTNVNTCLEHGRAQF*QVPHHP
Trigger: GGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC...ATGTTCTAGACAGGTGTTCACATTTGTGACCACCTTACTCACAGGTGCAGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp GCCAAGATAGAAGCTTGCAGGTCCTTCGTGTGGAGCTaGGCTCATCTTTTTCTTTCCCACCTTCTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: AKIEACRSFVWS*AHLFLSHLLQH
Trigger: GTGCTGGAGAAGGTGGGAAAGAAAAAGATGAGCTCAGCTCCACACGAAGGACCTGCAAGCTTCTATCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CATCCCTCATATCTCACACACACACACATGCACACCTaGAGGCACACACACGTACACACACATGCATGCACA +
Preference number: 3 (lower is better)
Translates to: HPSYLTHTHMHT*RHTHVHTHACT
Trigger: TGTGCATGCATGTGTGTGTACGTGTGTGTGCCTGCAGGTGTGCATGTGTGTGTGTGTGAGATATGAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CCAGATGTCATCCCTCATATCTCACACACACACACATaGACACCTGCAGGCACACACACGTACACACACATG +
Preference number: 3 (lower is better)
Translates to: PDVIPHISHTHT*TPAGTHTYTHM
Trigger: CATGTGTGTGTACGTGTGTGTGCCTGCAGGTGTGCATGTGTGTGTGTGTGAGATATGAGGGATGACATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR GCA 72 bp CACATGCACATGGGCACACACATACATGCACACACATaGACACACATGCACATGGCTTCCCTGAATCCATAC +
Preference number: 3 (lower is better)
Translates to: HMHMGTHIHAHT*THMHMASLNPY
Trigger: GTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCATGTATGTGTGTGCCCATGTGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CCA 72 bp TTTACTTCTGCAGCTACAGGGAATAAGGGCTTCTTCTaGGCCAAGATAGAAGCTTGCAGGTCCTTCGTGTGG +
Preference number: 3 (lower is better)
Translates to: FTSAATGNKGFF*AKIEACRSFVW
Trigger: CCACACGAAGGACCTGCAAGCTTCTATCTTGGCCCAGAAGAAGCCCTTATTCCCTGTAGCTGCAGAAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR-3UTR CAA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGAGCCCCTGCAGCATGTaGTCACACACCACACGGAAG +
Preference number: 3 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQSPCSM*SHTTRK
Trigger: CTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCT...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp GATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATaGGAAGAGCCACCACGGAGAATTATTTTCGTTCTT +
Preference number: 3 (lower is better)
Translates to: DEQESSTVAMPA*EEPPRRIIFVL
Trigger: AAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
3UTR-3UTR CAA 90 bp TCAGCAATTTTACTTCTGCAGCTACAGGGAATAAGGGCTTCTTCTGGGCCAAGAGGAAGTAGCAAATACTaGTTATGTCAGAATCTGTGC +
Preference number: 3 (lower is better)
Translates to: SAILLLQLQGIRASSGPRGSSKY*LCQNLC
Trigger: GCACAGATTCTGACATAACAAGTATTTGCTACTTCC...TCTTGGCCCAGAAGAAGCCCTTATTCCCTGTAGCTGCAGAAGTAAAATTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR TCA 72 bp AGGAGCAACCAGCCCATCCCATTATATCCATTAGTTTaGCTGCAGTGCTTGGAAGTAGCAAATACTTGTTAT +
Preference number: 3 (lower is better)
Translates to: RSNQPIPLYPLV*LQCLEVANTCY
Trigger: ATAACAAGTATTTGCTACTTCCAAGCACTGCAGTCAAACTAATGGATATAATGGGATGGGCTGGTTGCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp GCTGCAGCCGGGTGCCGTCGGCCAGCATGTCCGGTGTCTCCGCCCGCAGGTCAGCCCTCCACGGCCACCTaGAGGAGTGACGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AAAGCRRPACPVSPPAGQPSTAT*RSDGRG
Trigger: GCCTCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGG...CTGACCTGCGGGCGGAGACACCGGACATGCTGGCCGACGGCACCCGGCTGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GAGGGGTCCGAGAGGAGCTGGGCCACCAGCCGGGAAAAGGCCTGGGCTCCCTGCGTGCCAGCCCCTGCCTaGGTGCGGCCGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: EGSERSWATSREKAWAPCVPAPA*VRPVLT
Trigger: CGTCAGCACCGGCCGCACCCAGGCAGGGGCTGGCAC...GCAGGGAGCCCAGGCCTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCCCTGTCCACGGCTaGGGCTGGCACGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: AGGLSAQGLVHLQQAVGVGPVHG*GWHARH
Trigger: GTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCC...GACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TCAGCTCCCTGGCCCTGTCCACGGCTGGGGCTGGCACGCTCGCCACCCGCATCTTCCTCCCCTCCTGCCTaGCAACCTCGGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SAPWPCPRLGLARSPPASSSPPA*QPRPPC
Trigger: GCAGGGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGA...AGATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCCAGGGAGCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CCCTCTCCCCGCTGGCCCCGGCAGCTCTCCAGCATGTCCAGAAGCCCGGCCAGGGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSPRWPRQLSSMSRSPARVDHRV*RACRSR
Trigger: CCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCAC...CCTGGCCGGGCTTCTGGACATGCTGGAGAGCTGCCGGGGCCAGCGGGGAGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp GCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGCACACTGGGCGGCCGTaGCTGGGTCACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGSRSSGSKSSMAHWAAVHTGRP*LGHCGR
Trigger: TCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTG...CACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGACGCTTGTGGCACAGGTaGCGCAGGGCCGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PGLPALLVAARVPGRPEGRLWHR*RRAARR
Trigger: GCGCCTGGCGGCCCTGCGGCACCTGTGCCACAAGCG...TCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp AGCCCCTGCCTGGGTGCGGCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCGGGCGGGGCAGGACGTaGCCAGTTTTTGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPCLGAAGADAFCRPGGFGRGRT*PVFAGP
Trigger: GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCC...GAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCCAGGCAGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp GTGCCTGTAGCCAGCACTGCAGCTGGTGGGAGATCCAGGCCGCCAGGGAGGGGCCGCTGTCCAGGAGGGTaGCATGCCCAAAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VPVASTAAGGRSRPPGRGRCPGG*HAQRRG
Trigger: CCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCG...GCCCCTCCCTGGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCTACAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAACCAGCAGCCTCCTCTaGAGGTCCGGGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: STAAQVSSAHPPGPLPAATSSLL*RSGKPA
Trigger: GGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGT...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGCGGCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCCCAGGCGCTGCTGAATaGCCGCGTTGGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: SPCLGAAGADAFCRPGGFPGAAE*PRWDTA
Trigger: CGCTGTGTCCCAACGCGGCCATTCAGCAGCGCCTGG...GAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCCAGGCAGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGAGGTCCTCCGACAGGTaGAAGCGGGCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGSRSSGSKSSMAHWAAVRSSDR*KRAGSL
Trigger: CAGAGAGCCCGCCCGCTTCCACCTGTCGGAGGACCT...CACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR TCA 90 bp AAGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCCACACTGGGCGGCCGTaGCTGGGTCACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KHRSPGVLSTPTGTPASCHTGRP*LGHCGR
Trigger: TCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTG...GCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGGGGTGCGGCCGGTGCTaGCGCTTTCTGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGQQEFHGTLGGRDWVTVGCGRC*RFLQAG
Trigger: CCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCC...CACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR TCA 90 bp GGCTGCCCCGACGTCAGAATGATCCTCCCCTCCTGCCTGGCAACCTCGGCCGCCGCCCCGACGTCAGAATaGTCCTCCCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GCPDVRMILPSCLATSAAAPTSE*SSPPAW
Trigger: CCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGC...GGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp AAGGCCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGACGTCTGTGCCTGGCCTaGCGCTGTGCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAWAPCPVGGCESARTSRRLCLA*RCAAAA
Trigger: GGCAGCAGCCGCACAGCGTCAGGCCAGGCACAGACG...TCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CGCAGCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCACGAGGCCAGGAGGTaGACGTTCTCCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RSRQPLLGQQEFHGTLGGHEARR*TFSLGM
Trigger: CATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTG...GCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCGTCCACGGCTGGGGCTaGCACGCTCGCCACCCGCAT +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPVHGWG*HARHPH
Trigger: ATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGAC...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGGCCCTGTCCACGGCTaGGGCTGGCACGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARGPVHG*GWHARH
Trigger: GTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGGTCTCTCTCTGTGCCTaGGCCTCCGGCTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRVSLCA*ASGSQP
Trigger: TGGCTGGGAGCCGGAGGCCCAGGCACAGAGAGAGAC...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCCCCTGCCTGGGTGCGGCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCTGGCTTCCGTGCCCCTaGTCTCTCTCTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPCLGAAGADAFCRPGGFWLPCP*SLSVPG
Trigger: CCCAGGCACAGAGAGAGACCAGGGGCACGGAAGCCA...GAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCCAGGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCATCGGCCGCCCTGCGGTaGTCTTCACCATTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: STAAQVSSAHPPGPLPAASAALR*SSPLPS
Trigger: GCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGA...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAGCCTTGGCCTGCTGCTaGGCCTTCAGGGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: STAAQVSSAHPPGPLPAAALACC*AFREQS
Trigger: CGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGC...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGGGATCTGCCTGCCAGTaGATGGGCCCTGGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AGSRSSGSKSSMAHWAAVGSACQ*MGPGAF
Trigger: GAAGGCTCCAGGGCCCATCCACTGGCAGGCAGATCC...CACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCCAGGCCAAACTCTGTaGCTCAGGCCGCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRPGQTL*LRPRLA
Trigger: AGCCAGCCGCGGCCTGAGCCACAGAGTTTGGCCTGG...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CAA 72 bp CGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTaGGTGCACCTCCAGCAGGCAGTAGGCGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RQVEAGGLSAQG*VHLQQAVGVGS
Trigger: GCTGCCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR TCA 90 bp CTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCGGCAGCTGCGTAGATaGCCTGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LRQVEAGGLSAQGLVHLQRQLRR*PAPRRA
Trigger: CGCTCTGCGAGGAGCAGGTCATCTACGCAGCTGCCG...CTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CCAGAAGCCCGGCCAGGGGGTCGTCCAAGGCAGCAAACCCCCGCCAGGCTTCCTTTCAGCCTCAGGCTGTaGTGGGCCAGGCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PEARPGGRPRQQTPARLPFSLRL*WARLGH
Trigger: ATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCTGAA...AGGAAGCCTGGCGGGGGTTTGCTGCCTTGGACGACCCCCTGGCCGGGCTTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp CGCCACCCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCGCAGGTCAGCCATCTaGAGCCAGCGGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHPHLSVHQQQVHAAQNLRRSAI*SQRQGR
Trigger: CCGCCCCTGCCGCTGGCTGCAGATGGCTGACCTGCG...CAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGGGTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGAGTTCCATGGCACACTaGGCGGCCGTGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGSRSSGSKSSMAHWAAVSSMAH*AAVTGS
Trigger: TGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACT...CACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGTCAGTCGCCCTCCCCTaGAGCCTGAACCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWSVALP*SLNRRS
Trigger: ACTCCGCCGGTTCAGGCTCCAGGGGAGGGCGACTGA...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGCCACAGGGACCTGCCTaGGTGCGGCCGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: LFWGYAVPLLQTQDLPAQPQGPA*VRPVLT
Trigger: CGTCAGCACCGGCCGCACCCAGGCAGGTCCCTGTGG...CTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGCTCAGAAGGGACTGCTaGCCGGGCTGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARLRRDC*PGWGLG
Trigger: GCCCAGCCCCCAGCCCGGCCAGCAGTCCCTTCTGAG...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CCCTCTCCCCGCTGGCCCCGGCAGCTCTCCAGCATGTCCAGAAGCCCGGCCAGGCCAGCTGCAGTCACATaGCAGCTGGCAACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSPRWPRQLSSMSRSPARPAAVT*QLATSL
Trigger: CAAGGACGTTGCCAGCTGCCATGTGACTGCAGCTGG...CCTGGCCGGGCTTCTGGACATGCTGGAGAGCTGCCGGGGCCAGCGGGGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGGCCGCCAGGCGCTGCTaGATGGCCGCGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWAARRC*MAALGH
Trigger: GTGTCCCAACGCGGCCATTCAGCAGCGCCTGGCGGC...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGGCCCTGGCCGGAATCTaGGGGGCAGCGCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWALAGI*GAAPSD
Trigger: GTCTGAGGGCGCTGCCCCTCAGATTCCGGCCAGGGC...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CCCTCTCCCCGCTGGCCCCGGCAGCTCTCCAGCATGTCCAGAAGCCCGGCCAGGCAGGCAGCTCCTGTCTaGATCCTGCAGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PSPRWPRQLSSMSRSPARQAAPV*ILQLED
Trigger: ATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTG...CCTGGCCGGGCTTCTGGACATGCTGGAGAGCTGCCGGGGCCAGCGGGGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGGTGGCACTGCAGGAGTaGACCCTCGTGTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRVALQE*TLVSGQ
Trigger: CTGACCAGACACGAGGGTGCACTCCTGCAGTGCCAC...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp AGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGTCCACTCCACGTCTACAGCCACAGGGACCTaGCTGGGTGCGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SDGRGRPPATNTGVHSTSTATGT*LGAAGA
Trigger: AGCACCGGCCGCACCCAGGCAGGTCCCTGTGGCTGT...AGACGTGGAGTGGACACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGAGCACAGCCTTGGCCTaGTGCTGGGCCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWSTALA*CWAFRE
Trigger: CTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCT...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGCCAGCTGCAGCCGGGTaGCGTCGGCCAGCATGTCCG +
Preference number: 4 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQPAAAG*RRPACP
Trigger: CGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGG...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp GCGTGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTGCTGGCTCCGTGCCAGCCCCTaGCTGGGTGCGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: AWVTRTLKCLSTALACCWLRASP*LGAAGA
Trigger: AGCACCGGCCGCACCCAGGCAGGGGCTGGCACGGAG...CCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAGTGCACCCTCGTGTCTaGTCAGGTCTTCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: STAAQVSSAHPPGPLPAAVHPRV*SGLPTR
Trigger: CCTCGTGGGAAGACCTGACCAGACACGAGGGTGCAC...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GAGGGGTCCGAGAGGAGCTGGGCCACCAGCCGGGAAAAGGCCTGGGCTCCCTGCACACCAACCACTTGGTaGCACTGCAGGAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: EGSERSWATSREKAWAPCTPTTW*HCRSAP
Trigger: GGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGT...GCAGGGAGCCCAGGCCTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp AAGGCCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAGGGTCCGAGAGGAGCTaGGCCACCAGCCGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KAWAPCPVGGCESARTSRGSERS*ATSREK
Trigger: CTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCC...TCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GCTGTGTGGGGAATGGAGGCCGGGATCTGCCTGCCAGTGGATGGGCCCTGGAGCATCTGCTTCTCCACATaGGCCAGGGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: AVWGMEAGICLPVDGPWSICFST*ARAGQD
Trigger: GTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGAT...GCTCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCATTCCCCACACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCAGTCCACGGCTGGGGCTaGCACGCTCGCCACCCGCAT +
Preference number: 4 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPVHGWG*HARHPH
Trigger: ATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGAC...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTGGCTTCCGTGCCCCTaGTCTCTCTCTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGLRRTAPADARPACSAPWLPCP*SLSVPG
Trigger: CCCAGGCACAGAGAGAGACCAGGGGCACGGAAGCCA...AGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CGCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTTTCTGCAGGCCGGGTaGCTTCCGTGCCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRAASGPSWTAAASCPGLFLQAG*LPCPWS
Trigger: AGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAA...CAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
3UTR CAA 72 bp CTGGCAACCTCGGCCGCCCTGCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCCACACCGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LATSAALRWSSP*PSMRASTPRQR
Trigger: CCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CCACCAGGCCCTGCACATGGTCGGTCCAGTTCTCCTGTGACAGGCTCTTCCAGCCCCTCCCCTGGAGCCTaGACCGGCGGAGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PPGPAHGRSSSPVTGSSSPSPGA*TGGVPQ
Trigger: CTGTGGAACTCCGCCGGTTCAGGCTCCAGGGGAGGG...GCTGGAAGAGCCTGTCACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGGTGCGGCCGGTGCTaGCGCTTTCTGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGCGRC*RFLQAG
Trigger: CCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCA +
Preference number: 4 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWDARPA*SAPSDS
Trigger: TGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTC...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CGCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: RRAASGPSWTAAASCPGLCRRKT*LLSAFG
Trigger: TCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCA...CAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGCTTGTGGCACAGGTaGCGCAGGGCCGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRLWHR*RRAARR
Trigger: GCGCCTGGCGGCCCTGCGGCACCTGTGCCACAAGCG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CGCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGGACGTGCCCAGTTTTTaGAGGTCCCCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: RRAASGPSWTAAASCPGLDVPSF*RSPTIP
Trigger: CGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTC...CAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGGGCGGGGCAGGACGTaGCCAGTTTTTGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARGRGRT*PVFAGP
Trigger: GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGGLSAQGLVHLQQAVGVMPPRI*FSTWAR
Trigger: CCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCAT...GACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CGGCCACCTGCAGGAGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGCCAGCAGCAGGTCCATaGCGCCCAGAATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RPPAGVTAEAGPQQQTQVPAAGP*RPESAS
Trigger: AGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGG...CACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACTCCTGCAGGTGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CCCGACCTGGGCCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATGATCCTGCCGGGTGGCTTCCGTaGCCCTGGTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PDLGPELVEWLPRRQNDPAGWLP*PWSLSV
Trigger: CACAGAGAGAGACCAGGGGCACGGAAGCCACCCGGC...AGGATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCGGTGCTGACGCTTTCTaGAGGCCGGGTGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPGADAF*RPGGFR
Trigger: ACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACC...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp AGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCAATTGCCCAGCATGCGTaGATCCACACCGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: STAAQVSSAHPPGPLPAAIAQHA*IHTETA
Trigger: CGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAAT...TGCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp TCAGCTCCCTGGCCCTGTCCACGGCTGGGGCTGGCACGCTCGCCACCCGCATCTGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SAPWPCPRLGLARSPPASGGLHH*PACVHP
Trigger: TGGATGCACGCATGCTGGGCAATGGTGAAGACCACC...AGATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCCAGGGAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACATGATCCTCCCCTCCTaGCTGGCAACCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSLPCWWLRECQDVQKEHMILPS*LATSAA
Trigger: GGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCAT...GTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGCTCCTGTCTGCATCCCGCGGGAGGCAAGGCTaGAAAGTCCAGACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSWWRRWTCASRQLLSASRGRQG*KVQTLQ
Trigger: TTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCG...GGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCGCCTGTGGGTGCCCATaGGGTGGCGCTCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RASLEHARGGHVDSPPMTACGCP*GGARQR
Trigger: CCGCTGGCGAGCGCCACCGCATGGGCACCCACAGGC...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCATGGAGGCCGGGATCTaGCTGCCAGTGGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: PADARPACSAPSDSASPGMEAGI*LPVDGP
Trigger: GGGCCCATCCACTGGCAGGCAGATCCCGGCCTCCAT...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGAGGGCCACCTTGTCCTaGAGGAGCAGTGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LRQVEAGGLSAQGLVHLQRATLS*RSSGML
Trigger: GAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT...CTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CCCGACCTGGGCCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATGATCCTGTTGGGACACAGCGCTaGGGCTACGCCGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: PDLGPELVEWLPRRQNDPVGTQR*GYAVPL
Trigger: GAGCGGTACGGCGTAGCCCCAGCGCTGTGTCCCAAC...AGGATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGCTGGGCGGCCGTGACTaGGTCACTGTGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LGQQEFHGTLGGRDWVTVLGGRD*VTVGDQ
Trigger: CTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAG...CACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGTCAGTCGCCCTCCCCTaGAGCCTGAACCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARSVALP*SLNRRS
Trigger: ACTCCGCCGGTTCAGGCTCCAGGGGAGGGCGACTGA...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGGGTGGACGTTCTCCCTaGGGATGGGCAGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GSGRALCTGLGAPPAGSRGGRSP*GWAAGS
Trigger: ACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACC...CCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGGTGGACGTTCTCCCTaGGGATGGGCAGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWGGRSP*GWAAGS
Trigger: ACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACC...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGGGTCCGAGAGGAGCTaGGCCACCAGCCGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARGSERS*ATSREK
Trigger: CTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCCCTGTCCACGGCTaGGGCTGGCACGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGPVHG*GWHARH
Trigger: GTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCAGGTCCTCCGACAGGTaGAAGCGGGCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PADARPACSAPSDSASPGRSSDR*KRAGSL
Trigger: CAGAGAGCCCGCCCGCTTCCACCTGTCGGAGGACCT...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGTCTCTCTCTGTGCCTaGGCCTCCGGCTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARVSLCA*ASGSQP
Trigger: TGGCTGGGAGCCGGAGGCCCAGGCACAGAGAGAGAC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGTCGGCCGCCCTGCGGTaGTCTTCACCATTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LFWGYAVPLLQTQDLPAQSAALR*SSPLPS
Trigger: GCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGA...CTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp AAGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCAGCTGCCCGGAGCTTGTGGAATaGCTGCCCCGACGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KHRSPGVLSTPTGTPASCPELVE*LPRRQN
Trigger: ATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGG...GCAGCTGGCAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp AGCCCCGACCTGGGCCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATGATTGGGCCCGGAGCTTGTaGAATGGCTGCCCCGACGTC +
Preference number: 4 (lower is better)
Translates to: SPDLGPELVEWLPRRQNDWARSL*NGCPDV
Trigger: GACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCA...ATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCTGCGTCTGGGGCTaGGCCTGGCTCCTGCACCGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGCVWG*AWLLHR
Trigger: GCGGTGCAGGAGCCAGGCCCAGCCCCAGACGCAGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp ATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATGCCCCGACCGCAGCCGCTaGCCCGGAGGGCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: MPKGAGGKAAKSRPSKGCPDRSR*PGGLYP
Trigger: CGGATAAAGCCCTCCGGGCCAGCGGCTGCGGTCGGG...GCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGGTGCCCATGCGGTaGCGCTCGCCAGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RASLEHARGGHVDSPPMTWVPMR*RSPAAG
Trigger: CCCTGCCGCTGGCGAGCGCCACCGCATGGGCACCCA...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
3UTR CAA 72 bp AGACAGCGGAGGCTCCGTGCCAGCCCCTGCAGCATGTaGTCACACACCACACGGAAGGCCCTGGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: RQRRLRASPCSM*SHTTRKALAGI
Trigger: GATTCCGGCCAGGGCCTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 72 bp CAGAAGACCTCGGCCGCCCTGCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCCACACCGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: QKTSAALRWSSP*PSMRASTPRQR
Trigger: CCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCGCCAGGCGCTGCTaGATGGCCGCGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAARRC*MAALGH
Trigger: GTGTCCCAACGCGGCCATTCAGCAGCGCCTGGCGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCCTGGCCGGAATCTaGGGGGCAGCGCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSALAGI*GAAPSD
Trigger: GTCTGAGGGCGCTGCCCCTCAGATTCCGGCCAGGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR TCA 90 bp GAGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCCCGATGATGCCTCCTaGCCCAGCGCGGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EGLSRTRQRWPCGLSSNDPDDAS*PSAGGP
Trigger: AGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGG...GTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp GCCTGGCTGTCGGGGGCAGGGTCCCAGGGGCCACAGACGCGGATGTCCTGCTCAGAGCCTGGCCAAGGCTaGAGTTTTAGGAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AWLSGAGSQGPQTRMSCSEPGQG*SFRRKG
Trigger: TCCTTTCCTCCTAAAACTTCAGCCTTGGCCAGGCTC...TGAGCAGGACATCCGCGTCTGTGGCCCCTGGGACCCTGCCCCCGACAGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp AGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGCACACCCACCGGGACCCCTGCCCTGCAGTGCGCAGTaGGTATCCCAGGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: SSRSTAAQVSSAHPPGPLPCSAQ*VSQAKL
Trigger: GAGTTTGGCCTGGGATACTCACTGCGCACTGCAGGG...CAGGGGTCCCGGTGGGTGTGCTGAGGACACCTGGGCTGCGGTGCTTCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp TGCTTCTCTGAACCTGCCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAACGCCAAGCTCCGACTaGAGCTTCAACGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: CFSEPALVVEAVDVCQQATPSSD*SFNVAP
Trigger: GGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGT...TGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAGAGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCGTGGCACTGCAGGAGTaGACCCTCGTGTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPVALQE*TLVSGQ
Trigger: CTGACCAGACACGAGGGTGCACTCCTGCAGTGCCAC...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCCTCCACGGCCACCTaGAGGAGTGACGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPSTAT*RSDGRG
Trigger: GCCTCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LRQVEAGGLSAQGLVHLQWWLRE*QDVQKE
Trigger: TTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCA...CTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGTGCCCTGTTGGTGGCTaGGAGAGTGCCAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARCPVGG*ESARTS
Trigger: GGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCGACGTGCCCAGTTTTTaGAGGTCCCCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPDVPSF*RSPTIP
Trigger: CGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTC...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGRALCTGLGAPPAGSRMPPRI*FSTWAR
Trigger: CCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCAT...CCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGTCCCAGTTGGACAGCTaGTGCGTCTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWSQLDS*CVLSRA
Trigger: AGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGA...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGAGCGGGCGGGCTCTCTaGACAGGGCTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWSGRAL*TGLGAP
Trigger: AGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCT...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGGCCGGGTGGCTTCCGTaGCCCTGGTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWAGWLP*PWSLSV
Trigger: CACAGAGAGAGACCAGGGGCACGGAAGCCACCCGGC...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGGGTGCTGACGCTTTCTaGAGGCCGGGTGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LFWGYAVPLLQTQDLPAQGADAF*RPGGFR
Trigger: ACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACC...CTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp GTCGGCAGCTGCGTAGATGACCTGCTCCTCGCAGAGCGGCCTCCGGTCCCAGTTCTCCGTGCCAGCCCCTaGAGCATGTTGTCACACACC +
Preference number: 4 (lower is better)
Translates to: VGSCVDDLLLAERPPVPVLRASP*SMLSHT
Trigger: GGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAG...AACTGGGACCGGAGGCCGCTCTGCGAGGAGCAGGTCATCTACGCAGCTGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGACAGCGGAGGCTCCGTaGCAGCCCCTGCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: LGQQEFHGTLGGRDWVTVTAEAP*QPLQHV
Trigger: AACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGT...CACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGCAGGTCAGCCATCTaGAGCCAGCGGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRRSAI*SQRQGR
Trigger: CCGCCCCTGCCGCTGGCTGCAGATGGCTGACCTGCG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCAGCTGCAGCCGGGTaGCGTCGGCCAGCATGTCCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPAAAG*RRPACP
Trigger: CGGACATGCTGGCCGACGGCACCCGGCTGCAGCTGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CCAGAAGCCCGGCCAGGGGGTCGTCCAAGGCAGCAAACCCCCGCCAGGCTTCCTGAGTCGGTGGGCAAATaGAGGAACAACGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: PEARPGGRPRQQTPARLPESVGK*RNNASA
Trigger: GGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTC...AGGAAGCCTGGCGGGGGTTTGCTGCCTTGGACGACCCCCTGGCCGGGCTTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp GAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGACCAGGCACCCGGGCCGAGGACGCTaGCAGGCAGCTAGGAACGAG +
Preference number: 4 (lower is better)
Translates to: EHARGGHVDSPPMTWTRHPGRGR*QAARNE
Trigger: CTCGTTCCTAGCTGCCTGCCAGCGTCCTCGGCCCGG...GTGCCTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCAGTTCCATGGCACACTaGGCGGCCGTGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPSSMAH*AAVTGS
Trigger: TGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACT...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGAGGCACGAGGCCAGGAGGTaGACGTTCTCCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HCRSAPSCLVRSSHEARRHEARR*TFSLGM
Trigger: CATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTG...CCTCCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACTCCCTGCCCTGTTGGTaGCTGCGAGAGTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSLPCWWLRECQDVQKEHSLPCW*LRECQD
Trigger: GTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGA...GTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TCCAGCATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAGATCTGCTTCTCCACATaGGCCAGGGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SSMSRKWVATRPRWEPSQICFST*ARAGQD
Trigger: GTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGAT...CTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTCCACGGCTGGGGCTaGCACGCTCGCCACCCGCAT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVHGWG*HARHPH
Trigger: ATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCACAGGGACCTGCCTaGGTGCGGCCGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPQGPA*VRPVLT
Trigger: CGTCAGCACCGGCCGCACCCAGGCAGGTCCCTGTGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCTCCCCTCCTGCCTaGCAACCTCGGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSSPPA*QPRPPC
Trigger: GCAGGGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTCTGGGGCTGGGCCTaGCTCCTGCACCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVWGWA*LLHRLA
Trigger: AGCCAGGCGGTGCAGGAGCCAGGCCCAGCCCCAGAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp GCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTTGTCTCGGAAGTGGGTaGCAACACGACCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AERPPVPVGQLLRLVQGCCLGSG*QHDPGG
Trigger: CCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACA...ACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCCGTGCCCCTGGTCTCTCTAGCATGTCTCGGAAGTaGGTGGCAACACGACCCAGG +
Preference number: 4 (lower is better)
Translates to: AGADAFCRPGGFRAPGLSSMSRK*VATRPR
Trigger: CCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCT...AGAGAGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTCAGAAGGGACTGCTaGCCGGGCTGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLRRDC*PGWGLG
Trigger: GCCCAGCCCCCAGCCCGGCCAGCAGTCCCTTCTGAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp TGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCCTGCCTGCCAGTGGATaGGCCCTGGAGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: CPVGGCESARTSRRNTWPLPASG*ALEPSQ
Trigger: CTGTGAAGGCTCCAGGGCCCATCCACTGGCAGGCAG...GGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp GTCGGCAGCTGCGTAGATGACCTGCTCCTCGCAGAGCGGCCTCCGGTCCCAGTTGACTTGGAGGACAAGTaGAGGAGGATGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: VGSCVDDLLLAERPPVPVDLEDK*RRMGPG
Trigger: TCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTC...AACTGGGACCGGAGGCCGCTCTGCGAGGAGCAGGTCATCTACGCAGCTGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp GCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCAGGCTCTTCCAGCTCTaGGGCAAGAAGCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: AGGLSAQGLVHLQQAVGVRLFQL*GKKQLL
Trigger: TAGGAGCTGCTTCTTGCCCCAGAGCTGGAAGAGCCT...GACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCCTCCCCTGGAGCCTaGACCGGCGGAGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPSPGA*TGGVPQ
Trigger: CTGTGGAACTCCGCCGGTTCAGGCTCCAGGGGAGGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTCCCTCCCCTGGAGCCTaGACCGGCGGAGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSPSPGA*TGGVPQ
Trigger: CTGTGGAACTCCGCCGGTTCAGGCTCCAGGGGAGGG...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR TCA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCCTGGGCCCCTCCTGGTaGCTGCTGAGCCACATGAGC +
Preference number: 4 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLLGPSW*LLSHMS
Trigger: GCTCATGTGGCTCAGCAGTCACCAGGAGGGGCCCAG...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp GTCCAGGAGGGTGCCATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCTGCAGCTGGAAGATaGTGGCCAGTGGTGCCGCAA +
Preference number: 4 (lower is better)
Translates to: VQEGAMPKGAGGKAAKSRPAAGR*WPVVPQ
Trigger: TTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGG...TCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp CCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGGCAGCTTGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSKGCPSGKVARQGERQLEAVDV*QQAAPV
Trigger: GACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTC...AAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCACGCCGTACCGCTCCTaGAGACGCAAGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LVALQECTLVSGQVFPRGTPYRS*RRKTCL
Trigger: CAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGT...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACAGCCACAGGGACCTaGCTGGGTGCGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTATGT*LGAAGA
Trigger: AGCACCGGCCGCACCCAGGCAGGTCCCTGTGGCTGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp AAGGCCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGACACCATTGCCCAGCATaGGTGCATCCACACCGAGAC +
Preference number: 4 (lower is better)
Translates to: KAWAPCPVGGCESARTSRHHCPA*VHPHRD
Trigger: GTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTG...TCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCGGGCCGAGGACGCTaGCAGGCAGCTAGGAACGAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPGRGR*QAARNE
Trigger: CTCGTTCCTAGCTGCCTGCCAGCGTCCTCGGCCCGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCTTCCGCTCCCGCGTaGACCACAGGGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSASAPA*TTGSAG
Trigger: CCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp GCAAAGTCCAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTAGCCAGCACTGCAGCTaGTGGGAGATCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AKSRPSKGCPSGKVARQGSQHCS*WEIQAA
Trigger: GGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCT...ACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCCTCAGGCTGTGCTaGGCCAGGCTCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSLRLC*ARLGHG
Trigger: GCCATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp ATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATGCAACCTGCCCTCGTGGTaGAGGCGGTGGACGTGTGCC +
Preference number: 4 (lower is better)
Translates to: MPKGAGGKAAKSRPSKGCNLPSW*RRWTCA
Trigger: GGCACACGTCCACCGCCTCCACCACGAGGGCAGGTT...GCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCAGCAGCCTCCTCTaGAGGTCCGGGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTSSLL*RSGKPA
Trigger: GGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGTCCACAAACCGCTTGTaGCACAGGTGCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQSTNRL*HRCRRA
Trigger: GGCCCTGCGGCACCTGTGCCACAAGCGGTTTGTGGA...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCATCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPSRRNT*PSTATC
Trigger: GCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGA...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GGACGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATGGCTCCCTGCCCTGTTaGTGGCTGCGAGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRAQFLQVPHHPVAQLGDGSLPC*WLRECQ
Trigger: CTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC...ATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TTGTGGAATGGCTGCCCCGACGTCAGAATGATCCTCCCCTCCTGCCTGGCAACCGGCTCCCTGCCCTGTTaGTGGCTGCGAGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LWNGCPDVRMILPSCLATGSLPC*WLRECQ
Trigger: CTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC...GGTTGCCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGCAGCCATTCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGCGGAGGCAGCCGGGAAAAGGCCTaGGCTCCCTGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGLHHCPACVHPHRDSGGSREKA*APCPVG
Trigger: ACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCT...GCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCAGCCGGGAAAAGGCCTaGGCTCCCTGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LVALQECTLVSGQVFPRGSREKA*APCPVG
Trigger: ACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCT...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGCCTCCGGTCCCAGTTaGACAGCTGCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARASGPS*TAAASC
Trigger: ACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGTCTCTGCACAGGGCTTaGTGCACCTCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQQEFHGTLGGRDWVTVSLHRA*CTSSRQ
Trigger: CTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGA...CACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCGCCTGGCTCTGGGTaGCCTCGTCACCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPPGSG*PRHLSS
Trigger: GGAGCTCAGGTGACGAGGCCACCCAGAGCCAGGCGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCTCCTGCACCGCCTaGCTCTGGGTGGCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGSCTA*LWVASS
Trigger: TGACGAGGCCACCCAGAGCCAGGCGGTGCAGGAGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CCTTCTCCTGTCCCGATGATGCCTCCTGACCCAGCGCGGGAGGGCCTCTCTAGAGGCCAGGACACCTCCTaGGAAGAAGCTGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSPVPMMPPDPAREGLSRGQDTS*EEADPE
Trigger: CTCTGGGTCAGCTTCTTCCCAGGAGGTGTCCTGGCC...TCTAGAGAGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp GCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTCCAGTGAGACAACCCTaGGGCTGTGTGGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: AERPPVPVGQLLRLVQGCPVRQP*GCVGNG
Trigger: TCCATTCCCCACACAGCCCCAGGGTTGTCTCACTGG...ACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAGCATGTTGTCACTGTGACAGGCTCTTCTaGGGCTACGCCGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: HPHRDSGGSVPAPAACCHCDRLF*GYAVPL
Trigger: GAGCGGTACGGCGTAGCCCCAGAAGAGCCTGTCACA...GTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAGAAGACGGCACCAGGAATCCATaGGGACCAGCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HVSEVGGNTTQVGAVPEDGTRNP*GPAASS
Trigger: AGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCC...GTCTTCTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCACACTGGGCGGCCGTaGCTGGGTCACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSHTGRP*LGHCGR
Trigger: TCTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGGCAGCTGCGTAGATaGCCTGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRQLRR*PAPRRA
Trigger: CGCTCTGCGAGGAGCAGGTCATCTACGCAGCTGCCG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp AGTAACGGTCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCCGGCAGCTGCGTAGATaGCCTGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SNGPSCPSPPASSQPQSPRQLRR*PAPRRA
Trigger: CGCTCTGCGAGGAGCAGGTCATCTACGCAGCTGCCG...GGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGACCGTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR TCA 90 bp CCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTGGGTGCGGCCGGTGCTaGCGCTTTCTGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PSSRALSMFIVWLSSEGTGCGRC*RFLQAG
Trigger: CCCGGCCTGCAGAAAGCGTCAGCACCGGCCGCACCC...AGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCCCGACGTCAGAATaGTCCTCCCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAPTSE*SSPPAW
Trigger: CCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTGGGCCCCTCCTGGTaGCTGCTGAGCCACATGAGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLGPSW*LLSHMS
Trigger: GCTCATGTGGCTCAGCAGTCACCAGGAGGGGCCCAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp GAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGACCAGGCACCTTCTCCTGTCCCGATaGTGCCTCCTGACCCAGCGC +
Preference number: 4 (lower is better)
Translates to: EHARGGHVDSPPMTWTRHLLLSR*CLLTQR
Trigger: GCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAG...GTGCCTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCGGTCCAGTTCTCCTGTaGCAGGCTCTTCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PADARPACSAPSDSASPGGPVLL*QALLGL
Trigger: TAGCCCCAGAAGAGCCTGTCACAGGAGAACTGGACC...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVDHRV*RACRSR
Trigger: CCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCTCGGGCCTGCAGCTaGTTCAGCCTCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSARACS*FSLRLC
Trigger: GCACAGCCTGAGGCTGAAGCAGCTGCAGGCCCGAGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSEAVDV*QQAAPV
Trigger: GACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp GCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCA +
Preference number: 4 (lower is better)
Translates to: ALRWSSPLPSMRASTPRQDARPA*SAPSDS
Trigger: TGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTC...CTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GGACGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATACGCCGTACCGCTCCTaGAGACGCAAGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRAQFLQVPHHPVAQLGDTPYRS*RRKTCL
Trigger: CAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGT...ATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGACCACTTGGTGGCACTaGAGGAGTGCACCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: LFWGYAVPLLQTQDLPAQTTWWH*RSAPSC
Trigger: ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGT...CTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGCTTCTCTGCCCTGTTGGTGGCTaGGAGAGTGCCAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: PHLSVHQQQVHAAQNLLLCPVGG*ESARTS
Trigger: GGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA...GAGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGGCGGGGCAGGACGTaGCCAGTTTTTGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGRGRT*PVFAGP
Trigger: GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGACCCGCATCTGTCTGTaGACCAGCAGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARTRICL*TSSRSM
Trigger: CATGGACCTGCTGCTGGTGCACAGACAGATGCGGGT...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CGCCACCCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGACCCGCATCTGTCTGTaGACCAGCAGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RHPHLSVHQQQVHAAQNLTRICL*TSSRSM
Trigger: CATGGACCTGCTGCTGGTGCACAGACAGATGCGGGT...CAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGGGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGCAGTTGGACAGCTGCTaGGTCTTGTCCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARQLDSC*VLSRAV
Trigger: CACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTG...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp TGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCCAGTTGGACAGCTGCTaGGTCTTGTCCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CPVGGCESARTSRRNTWPQLDSC*VLSRAV
Trigger: CACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTG...GGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCGGGCGGGCTCTCTaGACAGGGCTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSGRAL*TGLGAP
Trigger: AGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTAGCGGGCGGGCTCTCTaGACAGGGCTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSSGRAL*TGLGAP
Trigger: AGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCT...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCGGGTGGCTTCCGTaGCCCTGGTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAGWLP*PWSLSV
Trigger: CACAGAGAGAGACCAGGGGCACGGAAGCCACCCGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp GGACGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATCAACCTCGGCCGCCCTaGGGTGGTCTTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: GRAQFLQVPHHPVAQLGDQPRPP*GGLHHC
Trigger: GCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTG...ATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCATGATCCTCCCCTCCTaGCTGGCAACCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSMILPS*LATSAA
Trigger: GGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCAT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp AGCCCCGACCTGGGCCCGGAGCTTGTGGAATGGCTGCCCCGACGTCAGAATGATGCGGCTGAAGATGTCTaGGTGGGTGACACGCACGTT +
Preference number: 4 (lower is better)
Translates to: SPDLGPELVEWLPRRQNDAAEDV*VGDTHV
Trigger: AACGTGCGTGTCACCCACGCAGACATCTTCAGCCGC...ATCATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGTCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CATAGCGCTCCACGAGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTGGCAGCTGCTCCAGCTaGAGTCACATGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSAPRGPPCPGGAVGCSSGSCSS*SHMAAG
Trigger: GCCAGCTGCCATGTGACTGCAGCTGGAGCAGCTGCC...AGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGAGCGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp AGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTTTTCAACGCCAAGCAGAGGGCTGTGCTCCTaGCAGCCCCAGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RATLSWRSSGMLIFSTPSRGLCS*QPQPLL
Trigger: GAGGAGCGGCTGGGGCTGGCAGGAGCACAGCCCTCT...GCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCGTAGAAGCCTGTGGGTaGCCATGCGGTGGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RASLEHARGGHVDSPPMTVEACG*PCGGAR
Trigger: GCGAGCGCCACCGCATGGGCACCCACAGGCTTCTAC...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp CATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAGAAGACCCCAGGACCCCCTCCTaGTCACGAACCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: HVSEVGGNTTQVGAVPEDPRTPS*SRTSTN
Trigger: GTTTGTGGAGGTTCGTGAGCAGGAGGGGGTCCTGGG...GTCTTCTGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCAGCGGGATCTCCTaGGTCCATCCTCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTSGIS*VHPQGR
Trigger: CCGGCCCTGAGGATGGACCCAGGAGATCCCGCTGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCCAGCACTGCAGCTaGTGGGAGATCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSQHCS*WEIQAA
Trigger: GGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp ATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATGCGCAGCTGGAAGATGCTaGCCAGTGGTGCCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MPKGAGGKAAKSRPSKGCAAGRC*PVVPQG
Trigger: GCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGC...GCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCGTGGTGGAGGCGGTaGACGTGTGCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSWWRR*TCASRQ
Trigger: CTGCCTGCTGGCACACGTCCACCGCCTCCACCACGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAACCTGCCCTCGTGGTaGAGGCGGTGGACGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSNLPSW*RRWTCA
Trigger: GGCACACGTCCACCGCCTCCACCACGAGGGCAGGTT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp ATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATGCCTGAACCTGCCCTCGTaGTGGAGGCGGTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: MPKGAGGKAAKSRPSKGCLNLPS*WRRWTC
Trigger: ACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAG...GCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTTGGGACACAGCGCTaGGGCTACGCCGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVGTQR*GYAVPL
Trigger: GAGCGGTACGGCGTAGCCCCAGCGCTGTGTCCCAAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCGCTGAATGGCCGCGTTaGGACACAGCGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PTTWWHCRSAPSCLVRSSAEWPR*DTALGL
Trigger: TAGCCCCAGCGCTGTGTCCCAACGCGGCCATTCAGC...GGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCAGGCGCTGCTGAATaGCCGCGTTGGGACACAGCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPGAAE*PRWDTA
Trigger: CGCTGTGTCCCAACGCGGCCATTCAGCAGCGCCTGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTGGGCGGCCGTGACTaGGTCACTGTGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLGGRD*VTVGDQ
Trigger: CTGGTCTCCCACAGTGACCCAGTCACGGCCGCCCAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGTCGCCCTCCCCTaGAGCCTGAACCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSVALP*SLNRRS
Trigger: ACTCCGCCGGTTCAGGCTCCAGGGGAGGGCGACTGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCGTGCACCCTCGTGTCTaGTCAGGTCTTCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LVALQECTLVSGQVFPRGVHPRV*SGLPTR
Trigger: CCTCGTGGGAAGACCTGACCAGACACGAGGGTGCAC...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGACACCAACCACTTGGTaGCACTGCAGGAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARTPTTW*HCRSAP
Trigger: GGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGT...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCTCCCTGCCCTGTTaGTGGCTGCGAGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGSLPC*WLRECQ
Trigger: CTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGGTCCGAGAGGAGCTaGGCCACCAGCCGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGSERS*ATSREK
Trigger: CTTTTCCCGGCTGGTGGCCCAGCTCCTCTCGGACCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGGCCTCCGGTCCCAGTTaGACAGCTGCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ALRWSSPLPSMRASTPRQASGPS*TAAASC
Trigger: ACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGC...CTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGGTCCTCCGACAGGTaGAAGCGGGCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRSSDR*KRAGSL
Trigger: CAGAGAGCCCGCCCGCTTCCACCTGTCGGAGGACCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTCTCTCTCTGTGCCTaGGCCTCCGGCTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVSLCA*ASGSQP
Trigger: TGGCTGGGAGCCGGAGGCCCAGGCACAGAGAGAGAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCTTTCTGCAGGCCGGGTaGCTTCCGTGCCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTTWWHCRSAPSCLVRSSFLQAG*LPCPWS
Trigger: AGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAA...GGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCGGCCGCCCTGCGGTaGTCTTCACCATTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSAALR*SSPLPS
Trigger: GCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGGGCCCGGAGCTTGTaGAATGGCTGCCCCGACGTC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSWARSL*NGCPDV
Trigger: GACGTCGGGGCAGCCATTCCACAAGCTCCGGGCCCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCTTGGCCTGCTGCTaGGCCTTCAGGGAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSALACC*AFREQS
Trigger: CGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGTCACCTGAGCTCCTaGGCCCCTCCTGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRHLSS*APPGDC
Trigger: GCAGTCACCAGGAGGGGCCCAGGAGCTCAGGTGACG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGCACCGCCTGGCTCTaGGTGGCCTCGTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSCTAWL*VASSPE
Trigger: CTCAGGTGACGAGGCCACCCAGAGCCAGGCGGTGCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp GGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACCCAGTGGATGGGCCCTaGAGCCTTCACAGACCTTTC +
Preference number: 4 (lower is better)
Translates to: GSLPCWWLRECQDVQKEHPVDGP*SLHRPF
Trigger: GAAAGGTCTGTGAAGGCTCCAGGGCCCATCCACTGG...GTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp GCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCCGTGCCCCTGGTCTCTCTCTCAGAAAGTGGAAGTaGCTTGGAGGACAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGADAFCRPGGFRAPGLSLRKWK*LGGQVE
Trigger: CTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAG...AGAGAGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTTCAGCCTCAGGCTGTaGTGGGCCAGGCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSFSLRL*WARLGH
Trigger: ATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCTGAA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp AGAGCAGTTAACTCTTTTCACTCGGGAGAAGAGGGCTGTGCTCCTGCCAGCCCCGCTCGGGCCTGCAGCTaGTTCAGCCTCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAVNSFHSGEEGCAPASPARACS*FSLRLC
Trigger: GCACAGCCTGAGGCTGAAGCAGCTGCAGGCCCGAGC...GGGGCTGGCAGGAGCACAGCCCTCTTCTCCCGAGTGAAAAGAGTTAACTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTTGACCGCTCGGGCCTaGAGCTGCTTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLTARA*SCFSLR
Trigger: CCTGAGGCTGAAGCAGCTGCAGGCCCGAGCGGTCAA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACGCCAAGCTCCGACTaGAGCTTCAACGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTPSSD*SFNVAP
Trigger: GGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACGCCGTACCGCTCCTaGAGACGCAAGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTPYRS*RRKTCL
Trigger: CAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCACCACTTGGTGGCACTaGAGGAGTGCACCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: LVALQECTLVSGQVFPRGTTWWH*RSAPSC
Trigger: ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGT...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGCCCTGTTGGTGGCTaGGAGAGTGCCAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSCPVGG*ESARTS
Trigger: GGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGTGCTGACGCTTTCTaGAGGCCGGGTGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGADAF*RPGGFR
Trigger: ACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACAGCGGAGGCTCCGTaGCAGCCCCTGCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTAEAP*QPLQHV
Trigger: AACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCAACCTCGGCCGCCCTaGGGTGGTCTTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSQPRPP*GGLHHC
Trigger: GCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACAGCCTTGGCCTGCTaGTGGGCCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTALAC*WAFREQ
Trigger: CTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATAGAACAGCCTTGGCCTGCTaGTGGGCCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RAQFLQVPHHPVAQLGDRTALAC*WAFREQ
Trigger: CTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGT...TCTATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCACAGCCTTGGCCTaGTGCTGGGCCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSTALA*CWAFRE
Trigger: CTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp GCAAAGTCCAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTAGACCCTCCAAAGGATaGCCCTCGGGGAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AKSRPSKGCPSGKVARQGRPSKG*PSGKVA
Trigger: GGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCT...ACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTGGACTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp TCAGCTCCCTGGCCCTGTCCACGGCTGGGGCTGGCACGCTCGCCACCCGCATCTCTCCTTGTCAGGTGCTaGCTTTTCTCTGTAATTGCT +
Preference number: 4 (lower is better)
Translates to: SAPWPCPRLGLARSPPASLLVRC*LFSVIA
Trigger: AGCAATTACAGAGAAAAGGCAGCACCTGACAAGGAG...AGATGCGGGTGGCGAGCGTGCCAGCCCCAGCCGTGGACAGGGCCAGGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp GCTTCTCCACATGGGCCAGGGCGGGGCAGGACGTGCCCAGTTTTTGCAGGTCCCACAGACCTTTCAGCTTaGTTCACTCTCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ASPHGPGRGRTCPVFAGPTDLSA*FTLGAP
Trigger: AGGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGT...GGGACCTGCAAAAACTGGGCACGTCCTGCCCCGCCCTGGCCCATGTGGAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTAGACCTCGGCCGCCCTaGGGTGGTCTTCACCATTGC +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSRPRPP*GGLHHC
Trigger: GCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTCT...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp GGAGGAGCAGTGGGATGCTCATCTTTTCAACGCCAAGCTCCGACTGCAGCTTCAAGCCTCAGGCTGTGCTaGGCCAGGCTCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GGAVGCSSFQRQAPTAASSLRLC*ARLGHG
Trigger: GCCATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCT...TGAAGCTGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCAGCTGGAAGATGCTaGCCAGTGGTGCCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAAGRC*PVVPQG
Trigger: GCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CTGGACTCTGTGAGCAGCAAGCGACTGACTGAGCGTGCAACGTGGTTACAGCCATCGTGGTGGAGGCGGTaGACGTGTGCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LDSVSSKRLTERATWLQPSWWRR*TCASRQ
Trigger: CTGCCTGCTGGCACACGTCCACCGCCTCCACCACGA...TGGCTGTAACCACGTTGCACGCTCAGTCAGTCGCTTGCTGCTCACAGAGTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTGAACCTGCCCTCGTaGTGGAGGCGGTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLNLPS*WRRWTC
Trigger: ACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCTGAATGGCCGCGTTaGGACACAGCGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAEWPR*DTALGL
Trigger: TAGCCCCAGCGCTGTGTCCCAACGCGGCCATTCAGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCACAAACCGCTTGTaGCACAGGTGCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSTNRL*HRCRRA
Trigger: GGCCCTGCGGCACCTGTGCCACAAGCGGTTTGTGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGACCAGGCCCTGCACATaGTCGGTCCAGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWTRPCT*SVQFSC
Trigger: ACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGT...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGACCAGGCCCTGCACATaGTCGGTCCAGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQTRPCT*SVQFSC
Trigger: ACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGT...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCACGTTCTCCCTGGGGATaGGCAGCTGGTAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPRSPWG*AAGSNG
Trigger: ACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACG...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp TCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTCCCCTGGCGTTCTCCCTGGGGATaGGCAGCTGGTAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: SFMSFTSSLESASVALPWRSPWG*AAGSNG
Trigger: ACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACG...CCAGGGGAGGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCACGAGGCCAGGAGGTaGACGTTCTCCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSHEARR*TFSLGM
Trigger: CATCCCCAGGGAGAACGTCCACCTCCTGGCCTCGTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSRRNT*PSTATC
Trigger: GCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCCTGCCCTGTTGGTaGCTGCGAGAGTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSLPCW*LRECQD
Trigger: GTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATAGATCCCTGCCCTGTTGGTaGCTGCGAGAGTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAQFLQVPHHPVAQLGDRSLPCW*LRECQD
Trigger: GTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGA...TCTATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCCGGGAAAAGGCCTaGGCTCCCTGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSREKA*APCPVG
Trigger: ACCAACAGGGCAGGGAGCCCAGGCCTTTTCCCGGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCATCTGCTTCTCCACATaGGCCAGGGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSICFST*ARAGQD
Trigger: GTCCTGCCCCGCCCTGGCCCATGTGGAGAAGCAGAT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGGCTTCCGTGCCCCTaGTCTCTCTCTGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSWLPCP*SLSVPG
Trigger: CCCAGGCACAGAGAGAGACCAGGGGCACGGAAGCCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTTTCTGCAGGCCGGGTaGCTTCCGTGCCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSFLQAG*LPCPWS
Trigger: AGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp AAGGCCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGATCACAGTTACAGGCCTaGCAGCGGCTGAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: KAWAPCPVGGCESARTSRSQLQA*QRLKMS
Trigger: AGACATCTTCAGCCGCTGCCAGGCCTGTAACTGTGA...TCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
3UTR CAA 72 bp TGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTaGGCCTGCTGCTGGGCCTTCAGGGAGCAGTCGACC +
Preference number: 4 (lower is better)
Translates to: WVTRTLKCLSTA*ACCWAFREQST
Trigger: GGTCGACTGCTCCCTGAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCACCAGGAATCCATaGGGACCAGCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGTRNP*GPAASS
Trigger: AGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTCTGGCAACGTCCTTaGTGTCAAAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVWQRP*CQSRAG
Trigger: GCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR TCA 90 bp ATGCCCAAAGGCGCGGGAGGCAAGGCTGCAAAGTCCAGACCCTCCAAAGGATGCGGAATCCCAGCACTTTaGGAAGACGAGGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: MPKGAGGKAAKSRPSKGCGIPAL*EDEAGR
Trigger: TCGGCCTGCCTCGTCTTCTCAAAGTGCTGGGATTCC...GCATCCTTTGGAGGGTCTGGACTTTGCAGCCTTGCCTCCCGCGCCTTTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp CCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGGCAGCTTAGTGGCCAGACAGGGTaGAAGGCAGCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSKGCPSGKVARQGERQLSGQTG*KAASLS
Trigger: GGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACT...AAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp CCTTCTCCTGTCCCGATGATGCCTCCTGACCCAGCGCGGGAGGGCCTCTCTAGAGAGGAAAGGAATCTGTaGGCGCAGTGGACATTCGGA +
Preference number: 4 (lower is better)
Translates to: PSPVPMMPPDPAREGLSREERNL*AQWTFG
Trigger: TCCGAATGTCCACTGCGCTCACAGATTCCTTTCCTC...TCTAGAGAGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp CGCCACCCGCATCTGTCTGTGCACCAGCAGCAGGTCCATGCCGCCCAGAATCTGACTCTCGGGGCACCTTaGCCAGATATAGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RHPHLSVHQQQVHAAQNLTLGAP*PDIEQE
Trigger: TTCCTGCTCTATATCTGGTCAAGGTGCCCCGAGAGT...CAGATTCTGGGCGGCATGGACCTGCTGCTGGTGCACAGACAGATGCGGGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp TGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCAGTCTTAGCAAGCTTTaGGTCAGGTGGACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: CPVGGCESARTSRRNTWPSLSKL*VRWTQP
Trigger: GGGCTGAGTCCACCTGACTCAAAGCTTGCTAAGACT...GGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp AGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGTCCACTCCACGTCTCTATGTCTGCCTCTGTaGGATCACTGCACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SDGRGRPPATNTGVHSTSLCLPL*DHCTCE
Trigger: CTCACAGGTGCAGTGATCTCACAGAGGCAGACATAG...AGACGTGGAGTGGACACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCTGTAGCCAGCACTaGAGCTGGTGGGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSACSQH*SWWEIQ
Trigger: CTGGATCTCCCACCAGCTGCAGTGCTGGCTACAGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp AAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTGAAAGGCAGCTTCTCTGTCGCCTGTAGCCAGCACTaGAGCTGGTGGGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: KDAPRGKWPDRVKGSFSVACSQH*SWWEIQ
Trigger: CTGGATCTCCCACCAGCTGCAGTGCTGGCTACAGGC...GACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp AGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTTTTCAACGCCAAGCTTGACCGCTCGGGCCTaGAGCTGCTTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RATLSWRSSGMLIFSTPSLTARA*SCFSLR
Trigger: CCTGAGGCTGAAGCAGCTGCAGGCCCGAGCGGTCAA...GCTTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCTGCAGCTGGAAGATaGTGGCCAGTGGTGCCGCAA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPAAGR*WPVVPQ
Trigger: TTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSDARPA*SAPSDS
Trigger: TGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSCRRKT*LLSAFG
Trigger: TCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp AGTAACGGTCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SNGPSCPSPPASSQPQSPCRRKT*LLSAFG
Trigger: TCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCA...GGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGACCGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTGGCACTGCAGGAGTaGACCCTCGTGTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVALQE*TLVSGQ
Trigger: CTGACCAGACACGAGGGTGCACTCCTGCAGTGCCAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PTTWWHCRSAPSCLVRSSWWLRE*QDVQKE
Trigger: TTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCA...GGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGACGTGCCCAGTTTTTaGAGGTCCCCCACCATCCCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSDVPSF*RSPTIP
Trigger: CGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp GGACGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATCCAGCAGCAGGTCCATaGCGCCCAGAATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRAQFLQVPHHPVAQLGDPAAGP*RPESAS
Trigger: AGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGG...ATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTCCGTGCCAGCCCCTaGAGCATGTTGTCACACACC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLRASP*SMLSHT
Trigger: GGTGTGTGACAACATGCTGCAGGGGCTGGCACGGAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp AACGCCAAGCTCCGACTGCAGCTTCAACGTCGCGCCCAGCGTGGCTGCTTCTCTGCAGTACGGTTGCCATaGCTGCATGAGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NAKLRLQLQRRAQRGCFSAVRLP*LHEKSH
Trigger: GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGC...AGAGAAGCAGCCACGCTGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp AGACCTCAGCGCTGTCCAGGAGGGTGCCATGCCCAAAGGCGCGGGAGGCAAGGCAGAAAGCAGTACGGTTaGCATGCCTGCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RPQRCPGGCHAQRRGRQGRKQYG*HACMRR
Trigger: TCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCT...GCCTTGCCTCCCGCGCCTTTGGGCATGGCACCCTCCTGGACAGCGCTGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTCTGTGCACCCTGCAGTaGGCAGTGAGTATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSLCTLQ*AVSIPG
Trigger: GCCTGGGATACTCACTGCGCACTGCAGGGTGCACAG...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGGGCCACCTTGTCCTaGAGGAGCAGTGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRATLS*RSSGML
Trigger: GAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGTTCCATGGCACACTaGGCGGCCGTGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSSMAH*AAVTGS
Trigger: TGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGTGGACGTTCTCCCTaGGGATGGGCAGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGGRSP*GWAAGS
Trigger: ACTACCAGCTGCCCATCCCCAGGGAGAACGTCCACC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTGCACCCTCGTGTCTaGTCAGGTCTTCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVHPRV*SGLPTR
Trigger: CCTCGTGGGAAGACCTGACCAGACACGAGGGTGCAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCCTCCGGTCCCAGTTaGACAGCTGCTGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSASGPS*TAAASC
Trigger: ACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCTCTGCACAGGGCTTaGTGCACCTCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSLHRA*CTSSRQ
Trigger: CTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTTCTCTGCACAGGGCTTaGTGCACCTCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSSLHRA*CTSSRQ
Trigger: CTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGA...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGTCTCGGAAGTGGGTaGCAACACGACCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSCLGSG*QHDPGG
Trigger: CCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGAGGCATACAGGCACCATATaGGCTCCTTGTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCRSAPSCLVRSSHEARRHTGTI*APCQVL
Trigger: CAGCACCTGACAAGGAGCCCATATGGTGCCTGTATG...CCTCCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 72 bp CAGCGGCTGAAGATGTCTGCGTGGGTGACACGCACGTaGAAATGCTTGAGCACAGCCTTGGCCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLKMSAWVTRT*KCLSTALACCW
Trigger: CCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCACGCAGACATCTTCAGCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCACTTGGTGGCACTaGAGGAGTGCACCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTTWWH*RSAPSC
Trigger: ACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGGTGGCTGCGAGAGTaGCAGGACGTCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSWWLRE*QDVQKE
Trigger: TTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCATGCCGCCCAGAATCTaGTTCTCCACATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSMPPRI*FSTWAR
Trigger: CCTGGCCCATGTGGAGAAGCAGATTCTGGGCGGCAT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCAGCAGCAGGTCCATaGCGCCCAGAATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPAAGP*RPESAS
Trigger: AGAAGCAGATTCTGGGCGGCATGGACCTGCTGCTGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCCGCATCTGTCTGTaGACCAGCAGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTRICL*TSSRSM
Trigger: CATGGACCTGCTGCTGGTGCACAGACAGATGCGGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCAGTTGGACAGCTGCTaGGTCTTGTCCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSQLDSC*VLSRAV
Trigger: CACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCCAGTTGGACAGCTaGTGCGTCTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSQLDS*CVLSRA
Trigger: AGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCATTGCCCAGCATGCGTaGATCCACACCGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSIAQHA*IHTETA
Trigger: CGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAAT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTATTGCCCAGCATGCGTaGATCCACACCGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSIAQHA*IHTETA
Trigger: CGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAAT...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCACCATTGCCCAGCATaGGTGCATCCACACCGAGAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSHHCPA*VHPHRD
Trigger: GTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATAGACACCATTGCCCAGCATaGGTGCATCCACACCGAGAC +
Preference number: 4 (lower is better)
Translates to: RAQFLQVPHHPVAQLGDRHHCPA*VHPHRD
Trigger: GTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTG...TCTATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGAGCTTGTGGAATGGCTaGCCCGACGTCAGAATGATC +
Preference number: 4 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQSLWNG*PDVRMI
Trigger: GATCATTCTGACGTCGGGGCAGCCATTCCACAAGCT...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCGGCTGAAGATGTCTaGGTGGGTGACACGCACGTT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSAAEDV*VGDTHV
Trigger: AACGTGCGTGTCACCCACGCAGACATCTTCAGCCGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCTTTCCACAGCCCGTaGAGCAGTAGAAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPFHSP*SSRSTA
Trigger: TGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CCTGACCCAGCGCGGGAGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGAGAAAACATCCCACTCTaGTTAGGTGGAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PDPAREGLSRTRQRWPCGENIPL*LGGEEA
Trigger: AGCCTCTTCTCCACCTAAGCAGAGTGGGATGTTTTC...TCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTCCCGCGCTGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp GCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCCGTGCCCCTGGTCTCTCTGCAGACATACACACCTaGACAAACGAACACAATGCA +
Preference number: 4 (lower is better)
Translates to: AGADAFCRPGGFRAPGLSADIHT*TNEHNA
Trigger: TGCATTGTGTTCGTTTGTGCAGGTGTGTATGTCTGC...AGAGAGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp AGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGTCCACTCCACGTCTTACTTGATATGTCTGTaGACCCTGCAGTGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SDGRGRPPATNTGVHSTSYLICL*TLQCAV
Trigger: CACTGCGCACTGCAGGGTGCACAGACATATCAAGTA...AGACGTGGAGTGGACACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACCCGGGCCGAGGACGCTaGCAGGCAGCTAGGAACGAG +
Preference number: 4 (lower is better)
Translates to: WMNKKAVRLPCLHEKSHHPGRGR*QAARNE
Trigger: CTCGTTCCTAGCTGCCTGCCAGCGTCCTCGGCCCGG...GTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp AACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAAGCTTCCGCTCCCGCGTaGACCACAGGGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NKKAVRLPCLHEKSHHGEASAPA*TTGSAG
Trigger: CCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGC...TTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp TGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACACCAGCAGCCTCCTCTaGAGGTCCGGGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: WMNKKAVRLPCLHEKSHHTSSLL*RSGKPA
Trigger: GGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGT...GTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GGACGTGCCCAGTTTTTGCAGGTCCCCCACCATCCCGTAGCCCAGCTTGGTGATATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GRAQFLQVPHHPVAQLGDMSKPG*HQESMR
Trigger: CCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACAT...ATCACCAAGCTGGGCTACGGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCAGGCCCTGCACATaGTCGGTCCAGTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTRPCT*SVQFSC
Trigger: ACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGTTCTCCCTGGGGATaGGCAGCTGGTAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRSPWG*AAGSNG
Trigger: ACCGTTACTACCAGCTGCCCATCCCCAGGGAGAACG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACACCAACCACTTGGTaGCACTGCAGGAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTPTTW*HCRSAP
Trigger: GGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCATCTACACCAACCACTTaGTGGCACTGCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPSTPTT*WHCRSA
Trigger: TGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGA...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCCGGAGCTTGTGGAATaGCTGCCCCGACGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSPELVE*LPRRQN
Trigger: ATTCTGACGTCGGGGCAGCCATTCCACAAGCTCCGG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACCTGAAGATGTCTGCGTaGGTGACACGCACGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GSLPCWWLRECQDVQKEHLKMSA*VTRTLK
Trigger: TTTCAACGTGCGTGTCACCCACGCAGACATCTTCAG...GTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGGAGACCTTTAGGTACTaGTCACAGTTACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARETFRY*SQLQAW
Trigger: CCAGGCCTGTAACTGTGACCAGTACCTAAAGGTCTC...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp GCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTGCTTCATCATGTCCCTaGAGACCTTTAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: AERPPVPVGQLLRLVQGCASSCP*RPLGTG
Trigger: ACCAGTACCTAAAGGTCTCCAGGGACATGATGAAGC...ACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCATGTCTCGGAAGTaGGTGGCAACACGACCCAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSMSRK*VATRPR
Trigger: CCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GATAACTGTAACCTCCGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCAGGCTGTAGAAGCCTGTaGGTGCCCATGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: DNCNLRLQGSSSSTASKPGCRSL*VPMRWR
Trigger: GCGCCACCGCATGGGCACCCACAGGCTTCTACAGCC...TGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCAGAACACGCCAGAGGTaGCCATGTGGACTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RASLEHARGGHVDSPPMTRTRQR*PCGLSS
Trigger: GGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCT...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp AAGCGACTGACTGAGCGTGCAACGTGGTTACAGCCAAACACAGAGAGTCGGTGGCCGGAGATGAGTGTGTaGGGAGACCTCAGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: KRLTERATWLQPNTESRWPEMSV*GDLSAV
Trigger: GACAGCGCTGAGGTCTCCTCACACACTCATCTCCGG...CCACCGACTCTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGTCAGTCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp GCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGCAGCACAGAAAGGATGGGGGATGTCCTGCTCAGTaGCCAGGGTGGCACGGACAG +
Preference number: 4 (lower is better)
Translates to: AGHEPCKGRCLKQHRKDGGCPAQ*PGWHGQ
Trigger: CTGTCCGTGCCACCCTGGTCACTGAGCAGGACATCC...CCCATCCTTTCTGTGCTGCTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp TGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCAGATCACTGCACCTGTaGGTAAGGTGGTCACAAATG +
Preference number: 4 (lower is better)
Translates to: CPVGGCESARTSRRNTWPRSLHL*VRWSQM
Trigger: CATTTGTGACCACCTTACTCACAGGTGCAGTGATCT...GGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCCTTCGTGTGGAGCTaGGCTCATCTTTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PADARPACSAPSDSASPGSFVWS*AHLFLS
Trigger: GGAAAGAAAAAGATGAGCTCAGCTCCACACGAAGGA...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGCTCGGGCCTGCAGCTaGTTCAGCCTCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGARACS*FSLRLC
Trigger: GCACAGCCTGAGGCTGAAGCAGCTGCAGGCCCGAGC...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCAGGCAGCTCCTGTCTaGATCCTGCAGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSQAAPV*ILQLED
Trigger: ATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGGLHH*PACVHP
Trigger: TGGATGCACGCATGCTGGGCAATGGTGAAGACCACC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp AGTAACGGTCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCCTCAGTCGCCCGGTGGTCTTCACCATTaGCCAGCATGCGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SNGPSCPSPPASSQPQSPGGLHH*PACVHP
Trigger: TGGATGCACGCATGCTGGGCAATGGTGAAGACCACC...GGGCGACTGAGGCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGACCGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR GCA 90 bp GCGTGGGTGACACGCACGTTGAAATGCTTGAGCACAGCCTTGGCCTGCTGCTGGCTGAGCCACATGAGCTaGTTCATCATGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AWVTRTLKCLSTALACCWLSHMS*FIMSLE
Trigger: CTCCAGGGACATGATGAAGCAGCTCATGTGGCTCAG...CCAGCAGCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCATGTACACATCATATaGACGCAGACATACACACCT +
Preference number: 4 (lower is better)
Translates to: LRQVEAGGLSAQGLVHLQHVHII*TQTYTP
Trigger: AGGTGTGTATGTCTGCGTGCATATGATGTGTACATG...CTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACGCTTCCGCTCCCGCGTaGACCACAGGGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHASAPA*TTGSAG
Trigger: CCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGC...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCTGCATCCTGCAGCTaGAAGATGCTGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSASCS*KMLASG
Trigger: ACCACTGGCCAGCATCTTCCAGCTGCAGGATGCAGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp AACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATCGTGGTGGAGGCGGTaGACGTGTGCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NKKAVRLPCLHEKSHHGESWWRR*TCASRQ
Trigger: CTGCCTGCTGGCACACGTCCACCGCCTCCACCACGA...TTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCACCAGCAGCCTCCTCTaGAGGTCCGGGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFTSSLL*RSGKPA
Trigger: GGCCGGCTTCCCGGACCTCCAGAGGAGGCTGCTGGT...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSMSKPG*HQESMR
Trigger: CCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACAT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGAAAGTGGAAGTGACTTaGAGGACAAGTGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGQQEFHGTLGGRDWVTVKVEVT*RTSGGG
Trigger: TCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTT...CACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGTCCAGTTCTCCTGTaGCAGGCTCTTCTCCACAAA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGPVLL*QALLHK
Trigger: TTTGTGGAGAAGAGCCTGTCACAGGAGAACTGGACC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR TCA 90 bp TCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGACCTGGACTCTCCTCCAATaGCCTGGACCAGGCACTCTA +
Preference number: 4 (lower is better)
Translates to: SLEHARGGHVDSPPMTWTWTLLQ*PGPGTL
Trigger: TAGAGTGCCTGGTCCAGGTCATTGGAGGAGAGTCCA...GGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp AACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTGACCGCTCGGGCCTaGAGCTGCTTCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NKKAVRLPCLHEKSHHGELTARA*SCFSLR
Trigger: CCTGAGGCTGAAGCAGCTGCAGGCCCGAGCGGTCAA...TTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp AACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAAACGCCAAGCTCCGACTaGAGCTTCAACGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: NKKAVRLPCLHEKSHHGETPSSD*SFNVAP
Trigger: GGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGT...TTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCTTGTGGAATGGCTaGCCCGACGTCAGAATGATC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSLWNG*PDVRMI
Trigger: GATCATTCTGACGTCGGGGCAGCCATTCCACAAGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACACGCACGTTGAAATaGTTGAGCACAGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTRTLK*LSTALA
Trigger: GGCCAAGGCTGTGCTCAAGCATTTCAACGTGCGTGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTGAGCCACATGAGCTaGTTCATCATGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLSHMS*FIMSLE
Trigger: CTCCAGGGACATGATGAAGCAGCTCATGTGGCTCAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR GCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGGCAGCTGCTCCAGCTaGAGTCACATGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGGSCSS*SHMAAG
Trigger: GCCAGCTGCCATGTGACTGCAGCTGGAGCAGCTGCC...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp AAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCCGGGCCGAGGACGCTaGCAGGCAGCTAGGAACGAG +
Preference number: 4 (lower is better)
Translates to: KQYGCHACMRRATTENYFPGRGR*QAARNE
Trigger: CTCGTTCCTAGCTGCCTGCCAGCGTCCTCGGCCCGG...AAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp TGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGCAGCTGGAAGATGCTaGCCAGTGGTGCCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: WMNKKAVRLPCLHEKSHHAAGRC*PVVPQG
Trigger: GCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGC...GTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGACTGAACCTGCCCTCGTaGTGGAGGCGGTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGLNLPS*WRRWTC
Trigger: ACACGTCCACCGCCTCCACCACGAGGGCAGGTTCAG...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GGATGCTCATCTTTTCAACGCCAAGCTCCGACTGCAGCTTCAACGTCGCGCCCAATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GCSSFQRQAPTAASTSRPMSKPG*HQESMR
Trigger: CCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACAT...TGGGCGCGACGTTGAAGCTGCAGTCGGAGCTTGGCGTTGAAAAGATGAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCTACACCAACCACTTaGTGGCACTGCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSTPTT*WHCRSA
Trigger: TGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GGGCAGCTGGTAGTAACGGTCCTTCATGTCCTTCACCTCCAGCCTCGAGTCAGCTCTACACCAACCACTTaGTGGCACTGCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQLVVTVLHVLHLQPRVSSTPTT*WHCRSA
Trigger: TGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGA...GCTGACTCGAGGCTGGAGGTGAAGGACATGAAGGACCGTTACTACCAGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCACAGTTACAGGCCTaGCAGCGGCTGAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSQLQA*QRLKMS
Trigger: AGACATCTTCAGCCGCTGCCAGGCCTGTAACTGTGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GAGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCCCACTCTGCTTAGGTaGAGAAGAGGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGLSRTRQRWPCGLSSNDPTLLR*RRGCRS
Trigger: GCTTCTACAGCCTCTTCTCCACCTAAGCAGAGTGGG...GTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp TCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGACCGCAGCACAGAAAGGATaGGGGGATGTGGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SLEHARGGHVDSPPMTWTAAQKG*GDVAIP
Trigger: TGGAATGGCCACATCCCCCCATCCTTTCTGTGCTGC...GGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp GAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCTGGACCAGGCACCAGTGGACATTCGGATaGGAATGTTTCTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EHARGGHVDSPPMTWTRHQWTFG*ECFLAS
Trigger: CGAGGCCAAGAAACATTCCCATCCGAATGTCCACTG...GTGCCTGGTCCAGGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp AGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTCTCCTCCAATGACCCCATGTTGGCCAGGATaGTCTCGATCTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RASLEHARGGHVDSPPMTPCWPG*SRSSDL
Trigger: GAGGTCAGAAGATCGAGACCATCCTGGCCAACATGG...GGTCATTGGAGGAGAGTCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CCA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGAAATGTAATTTTACATaGATAGGACTGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRKCNFT*IGLAKW
Trigger: CCACTTGGCCAGTCCTATCCATGTAAAATTACATTT...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCATTTCTCTGTAATTGCTaGCAGACGTCACACACCAAG +
Preference number: 4 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPFLCNC*QTSHTK
Trigger: CTTGGTGTGTGACGTCTGTCAGCAATTACAGAGAAA...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCTCCAGAAAATGCATaGATCTATGTCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PADARPACSAPSDSASPGSPENA*IYVCLC
Trigger: ACAGAGGCAGACATAGATTCATGCATTTTCTGGAGA...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTGAGGCGGTGGACGTGTaGCAGCAGGCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: YGCHACMRRATTENYFRSEAVDV*QQAAPV
Trigger: GACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTC...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGAGGAGCAGTGGGATaGTCATCTTTTCAACGCCAA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGGAVG*SSFQRQ
Trigger: TTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR GCA 90 bp CAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTGCTCCCAGTTGGACAGCTaGTGCGTCTTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QQSGTFHVYCLAVLRRDCSQLDS*CVLSRA
Trigger: AGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGA...GCAGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTCCTTTCCACAGCCCGTaGAGCAGTAGAAGCACCGCA +
Preference number: 4 (lower is better)
Translates to: PSSRALSMFIVWLSSEGTPFHSP*SSRSTA
Trigger: TGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGG...AGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCAGAGGGCTGTGCTCCTaGCAGCCCCAGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HACMRRATTENYFRSSKSRGLCS*QPQPLL
Trigger: GAGGAGCGGCTGGGGCTGGCAGGAGCACAGCCCTCT...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GCAGAGCGGCCTCCGGTCCCAGTTGGACAGCTGCTGCGTCTTGTCCAGGGCTGTGTTCTCTCCAGAAAATaGATGAATCTATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AERPPVPVGQLLRLVQGCVLSRK*MNLCLP
Trigger: AGGCAGACATAGATTCATGCATTTTCTGGAGAGAAC...ACAGCCCTGGACAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCCGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTAGCCAGCACTGCAGCTaGTGGGAGATCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YGCHACMRRATTENYFRSSQHCS*WEIQAA
Trigger: GGCGGCCTGGATCTCCCACCAGCTGCAGTGCTGGCT...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCAGCCTCAGGCTGTGCTaGGCCAGGCTCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: HACMRRATTENYFRSSKSSLRLC*ARLGHG
Trigger: GCCATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCT...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp AAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTAACCTGCCCTCGTGGTaGAGGCGGTGGACGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KQYGCHACMRRATTENYFNLPSW*RRWTCA
Trigger: GGCACACGTCCACCGCCTCCACCACGAGGGCAGGTT...AAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGTCCTGGAGGAGCAGTaGGATGCTCATCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSVLEEQ*DAHLFN
Trigger: GTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGAC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTGAAGATGTCTGCGTaGGTGACACGCACGTTGAAA +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLKMSA*VTRTLK
Trigger: TTTCAACGTGCGTGTCACCCACGCAGACATCTTCAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGAGACCTTTAGGTACTaGTCACAGTTACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSETFRY*SQLQAW
Trigger: CCAGGCCTGTAACTGTGACCAGTACCTAAAGGTCTC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp CACATACATGCACACACATGCACACACATGCACATGGCTTCCCTGAATCCATACGGGCTGTGTGGGGAATaGAGGCCGGGATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HIHAHTCTHMHMASLNPYGLCGE*RPGSAC
Trigger: GCAGGCAGATCCCGGCCTCCATTCCCCACACAGCCC...GTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCATGTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 72 bp GTGGATGGGCCCTGGAGCCTTCACAGACCTTTCAGCTaGCTTCACTCTCGGGGCACCTTGACCAGATATAGA +
Preference number: 4 (lower is better)
Translates to: VDGPWSLHRPFS*LHSRGTLTRYR
Trigger: TCTATATCTGGTCAAGGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGTGAAGGCTCCAGGGCCCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
3UTR CAA 72 bp GCGAATGAGGAAACAAACTCAGAAAGTGGAAGTGACTaGGAGGACAAGTGGAGGAGGATGGGCCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: ANEETNSESGSD*EDKWRRMGPGR
Trigger: CCGTCCCGGGCCCATCCTCCTCCACTTGTCCTCCAAGTCACTTCCACTTTCTGAGTTTGTTTCCTCATTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCAGCTGGCAACGTCCTTaGTGTCAAAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFSWQRP*CQSRAG
Trigger: GCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGCT...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR TCA 90 bp AACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAAGTTGCCATGCCTGCATaGGAAGAGCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: NKKAVRLPCLHEKSHHGEVAMPA*EEPPRR
Trigger: TCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAAC...TTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR TCA 90 bp GCTGGCCTTGTTGACAGAGCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGATGGTCTCGATCTTCTaGCCTCGTGATCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGLVDRAGHEPCKGRCLKMVSIF*PRDPPA
Trigger: GGCAGGAGGATCACGAGGTCAGAAGATCGAGACCAT...CTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGCTCTGTCAACAAGGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HACMRRATTENYFRSSKSVDHRV*RACRSR
Trigger: CCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCAC...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp AAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTTTCAGCCTCAGGCTGTaGTGGGCCAGGCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KQYGCHACMRRATTENYFFSLRL*WARLGH
Trigger: ATGCCCGAGCCTGGCCCAGCACAGCCTGAGGCTGAA...AAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCCTGCAGCTGGAAGATaGTGGCCAGTGGTGCCGCAA +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHPAAGR*WPVVPQ
Trigger: TTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGG...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACAGGGCCACCTTGTCCTaGAGGAGCAGTGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHRATLS*RSSGML
Trigger: GAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCAGGGCCACCTTGTCCTaGAGGAGCAGTGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFRATLS*RSSGML
Trigger: GAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCT...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGCTTCATCATGTCCCTaGAGACCTTTAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSASSCP*RPLGTG
Trigger: ACCAGTACCTAAAGGTCTCCAGGGACATGATGAAGC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CCA 90 bp GCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGCAGCACAGAAAGGATGGGGATGGGAATGTTTCTTaGCCTCGGGGGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGHEPCKGRCLKQHRKDGDGNVS*PRGRER
Trigger: TCTCTCCCTCCCCCGAGGCCAAGAAACATTCCCATC...CCCATCCTTTCTGTGCTGCTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp CCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCAGAAGGGACTGAAGCAGCTCCTACTTaGTATGTCTGTGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PSSRALSMFIVWLSSEGTEAAPT*YVCAPC
Trigger: GCAGGGTGCACAGACATATCAAGTAGGAGCTGCTTC...AGTCCCTTCTGAGGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR GCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGACAGGCAGCTCCTGTCTaGATCCTGCAGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGQAAPV*ILQLED
Trigger: ATCTTCCAGCTGCAGGATGCAGACAGGAGCTGCCTG...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCTCTCCAGAGGCAGCTaGTCCAGCTGCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHLSRGS*SSCSHM
Trigger: CATGTGACTGCAGCTGGAGCAGCTGCCTCTGGAGAG...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGATACGGTTGCCATGCCTaGATGAGAAGAGCCACCACG +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGYGCHA*MRRATT
Trigger: CGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp TGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACTACGGTTGCCATGCCTaGATGAGAAGAGCCACCACG +
Preference number: 4 (lower is better)
Translates to: WMNKKAVRLPCLHEKSHHYGCHA*MRRATT
Trigger: CGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA...GTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGCAGCACAGAAAGGATGGGTTCCCCAGGCTGGAGTaGAATGACACAACCTCGGAT +
Preference number: 4 (lower is better)
Translates to: AGHEPCKGRCLKQHRKDGFPRLE*NDTTSD
Trigger: ATCCGAGGTTGTGTCATTGCACTCCAGCCTGGGGAA...CCCATCCTTTCTGTGCTGCTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp ATCACTGCACCTGTGAGTAAGGTGGTCACAAATGTGAACACCTGTCTAGAACATAGGCCGGGATCTGCCTaGCAGTGGATGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ITAPVSKVVTNVNTCLEHRPGSA*QWMGPG
Trigger: TCCAGGGCCCATCCACTGGCAGGCAGATCCCGGCCT...ATGTTCTAGACAGGTGTTCACATTTGTGACCACCTTACTCACAGGTGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp TGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTTATGTCAGAATCTGTaGTTCAAAGCTTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: CPVGGCESARTSRRNTWPLCQNL*FKASLL
Trigger: AAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA...GGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCCCAGCTGCAGTCACATaGCAGCTGGCAACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFPAAVT*QLATSL
Trigger: CAAGGACGTTGCCAGCTGCCATGTGACTGCAGCTGG...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GATAACTGTAACCTCCGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCACTCTGTTCCCCAGGCTaGAGTGCAATGACACAACCT +
Preference number: 4 (lower is better)
Translates to: DNCNLRLQGSSSSTASKPLCSPG*SAMTQP
Trigger: AGGTTGTGTCATTGCACTCCAGCCTGGGGAACAGAG...TGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR TCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCGGCACCAGGAATCCATaGGGACCAGCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HACMRRATTENYFRSSKSGTRNP*GPAASS
Trigger: AGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCC...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR TCA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTGTTGCCATGCCTGCATaGGAAGAGCCACCACGGAGA +
Preference number: 4 (lower is better)
Translates to: YGCHACMRRATTENYFRSVAMPA*EEPPRR
Trigger: TCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAAC...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR TCA 90 bp CACATACATGCACACACATGCACACACATGCACATGGCTTCCCTGAATCCATACAACTGGCAACGTCCTTaGTGTCAAAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HIHAHTCTHMHMASLNPYNWQRP*CQSRAG
Trigger: GCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGTT...GTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCATGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGCCCTCCACGGCCACCTaGAGGAGTGACGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQPSTAT*RSDGRG
Trigger: GCCTCGGCCGTCACTCCTGCAGGTGGCCGTGGAGGG...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp AAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCTCTCCAGAGGCAGCTaGTCCAGCTGCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: KQYGCHACMRRATTENYFLSRGS*SSCSHM
Trigger: CATGTGACTGCAGCTGGAGCAGCTGCCTCTGGAGAG...AAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GTTACAGCCAAACACAGAGAGTCGGTGGGCAAATGCAGGAACAACGCATCAGCCAACACAGAGAGTCGGTaGGCAAATGCAGGAACAACG +
Preference number: 4 (lower is better)
Translates to: VTAKHRESVGKCRNNASANTESR*ANAGTT
Trigger: CGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTT...GGCTGATGCGTTGTTCCTGCATTTGCCCACCGACTCTCTGTGTTTGGCTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR GCA 90 bp ATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGGAGGAGCAGTGGGATaGTCATCTTTTCAACGCCAA +
Preference number: 4 (lower is better)
Translates to: MNKKAVRLPCLHEKSHHGGGAVG*SSFQRQ
Trigger: TTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCC...TCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GATAACTGTAACCTCCGCCTCCAGGGTTCAAGCAGTTCTACTGCCTCCAAGCCACCATGTAAGGGCAGATaGCTAAAGCAGCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: DNCNLRLQGSSSSTASKPPCKGR*LKQHRK
Trigger: CTTTCTGTGCTGCTTTAGGCATCTGCCCTTACATGG...TGGCTTGGAGGCAGTAGAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp GCTGGCCTTGTTGACAGAGCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGTTCAAGCAGTTCTACTaGCTCCAAGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGLVDRAGHEPCKGRCLKFKQFY*LQAILL
Trigger: CAGGAGAATGGCTTGGAGGCAGTAGAACTGCTTGAA...CTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGCTCTGTCAACAAGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR GCA 90 bp CTCCACGTCTACACCAACCACTTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTCACAAACGAACACAATaGACACACAGATATACATGC +
Preference number: 4 (lower is better)
Translates to: LHVYTNHLVALQECTLVSHKRTQ*THRYTC
Trigger: GCATGTATATCTGTGTGTGCATTGTGTTCGTTTGTG...AGACACGAGGGTGCACTCCTGCAGTGCCACCAAGTGGTTGGTGTAGACGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTGCATCCTGCAGCTaGAAGATGCTGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: YGCHACMRRATTENYFRSSASCS*KMLASG
Trigger: ACCACTGGCCAGCATCTTCCAGCTGCAGGATGCAGA...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp AAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGG +
Preference number: 4 (lower is better)
Translates to: KQYGCHACMRRATTENYFMSKPG*HQESMR
Trigger: CCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACAT...AAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACGGAGGAGCAGTGGGATaGTCATCTTTTCAACGCCAA +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHGGAVG*SSFQRQ
Trigger: TTGGCGTTGAAAAGATGAGCATCCCACTGCTCCTCC...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR GCA 90 bp CATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTAAGAGCGCAGTACGGTTGCCATaGCTGCATGAGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HACMRRATTENYFRSSKSAVRLP*LHEKSH
Trigger: GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGC...GCTCTTAGAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp GAATGGATGAACAAGAAAGCAGTACGGTTGCCATGCCTGCATGAGAAGAGCCACGTCCTGGAGGAGCAGTaGGATGCTCATCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: EWMNKKAVRLPCLHEKSHVLEEQ*DAHLFN
Trigger: GTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGAC...GTGGCTCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTTGTTCATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCGTCCTGGAGGAGCAGTaGGATGCTCATCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFVLEEQ*DAHLFN
Trigger: GTTGAAAAGATGAGCATCCCACTGCTCCTCCAGGAC...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
3UTR CAA 72 bp AGAGCAAGTCCTAAAAATACAGAATTCACTAAGAGCTaGGAACAGAAGACCTCGGCCGCCCTGCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RASPKNTEFTKS*EQKTSAALRWS
Trigger: AGACCACCGCAGGGCGGCCGAGGTCTTCTGTTCCAAGCTCTTAGTGAATTCTGTATTTTTAGGACTTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCAGAAAGCAGTACGGTTaGCATGCCTGCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFRKQYG*HACMRR
Trigger: TCTTCTCATGCAGGCATGGCAACCGTACTGCTTTCT...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGTCCAGAAGGAACACGTaGCCCTCCACGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQSRRNT*PSTATC
Trigger: GCAGGTGGCCGTGGAGGGCCACGTGTTCCTTCTGGA...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR TCA 90 bp AGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGGGAGAAGAGGGCACCAGGAATCCATaGGGACCAGCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RIIFVLLRAVNSFHSGEEGTRNP*GPAASS
Trigger: AGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCC...CTCTTCTCCCGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR TCA 90 bp AGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGGGAGAAGAGAGCTGGCAACGTCCTTaGTGTCAAAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RIIFVLLRAVNSFHSGEESWQRP*CQSRAG
Trigger: GCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGCT...CTCTTCTCCCGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CCA 90 bp ATCACTGCACCTGTGAGTAAGGTGGTCACAAATGTGAACACCTGTCTAGAACATAATTCACTAAGAGCTTaGAACAGAAGACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ITAPVSKVVTNVNTCLEHNSLRA*NRRPRP
Trigger: CGGCCGAGGTCTTCTGTTCCAAGCTCTTAGTGAATT...ATGTTCTAGACAGGTGTTCACATTTGTGACCACCTTACTCACAGGTGCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR GCA 90 bp TTATGTCAGAATCTGTGCTTCAAAGCTTCCCTTCTTCAAAAATGTTCTCTCCAGACGTCACACACCAAGTaGTTCCAAAAACTGGCAACG +
Preference number: 4 (lower is better)
Translates to: LCQNLCFKASLLQKCSLQTSHTK*FQKLAT
Trigger: CGTTGCCAGTTTTTGGAAGCACTTGGTGTGTGACGT...CTGGAGAGAACATTTTTGAAGAAGGGAAGCTTTGAAGCACAGATTCTGACATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CCA 90 bp AGAATTATTTTCGTTCTTCTAAGAGCAGTTAACTCTTTTCACTCGGGAGAAGAGACTGAGCGTGCAACGTaGTTACAGCCAAACACAGAG +
Preference number: 4 (lower is better)
Translates to: RIIFVLLRAVNSFHSGEETERAT*LQPNTE
Trigger: CTCTGTGTTTGGCTGTAACCACGTTGCACGCTCAGT...CTCTTCTCCCGAGTGAAAAGAGTTAACTGCTCTTAGAAGAACGAAAATAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460390.6
3UTR CAA 72 bp ATTAGTTTGACTGCAGTGCTTGGAAGTAGCAAATACTaGTTATGTCAGAATCTGTGCTTCAAAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ISLTAVLGSSKY*LCQNLCFKASL
Trigger: AAGGGAAGCTTTGAAGCACAGATTCTGACATAACAAGTATTTGCTACTTCCAAGCACTGCAGTCAAACTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS GCA 90 bp GCTTCCTCCCGGAGCTGCTTCCGCTCCCGCGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGGAGGGGGTCCCGGCCCATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ASSRSCFRSRVDHRV*RACRSRRGSRPMRW
Trigger: CCACCGCATGGGCCGGGACCCCCTCCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGCAGCTCCGGGAGGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340951.9
ENST00000479452.5
ENST00000490886.5
CDS GCA 90 bp TGTCCCTCGGGACTCTGCTTCCGCTCCCGCGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGGAGGGGGTCCCGGCCCATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: CPSGLCFRSRVDHRV*RACRSRRGSRPMRW
Trigger: CCACCGCATGGGCCGGGACCCCCTCCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGCAGAGTCCCGAGGGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS CCA 90 bp CATGCGGTGGCGCTCGCCAGCGGCAGGGTCACCAGCGGGATCTCCTaGGTCCATCCTCAGGGCCGGGCCGAGGACGCTGGCAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: HAVALASGRVTSGIS*VHPQGRAEDAGRQL
Trigger: TAGCTGCCTGCCAGCGTCCTCGGCCCGGCCCTGAGGATGGACCCAGGAGATCCCGCTGGTGACCCTGCCGCTGGCGAGCGCCACCGCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340951.9
ENST00000460390.6
ENST00000465160.2
ENST00000475006.1
ENST00000479452.5
ENST00000490886.5
CDS GCA 90 bp AAACTCCGTCTCTACTGCTTCCGCTCCCGCGTGGACCACAGGGTCTaGAGGGCCTGCAGGAGCAGGAGGGGGTCCCGGCCCATGCGGTGG +
Preference number: 5 (lower is better)
Translates to: KLRLYCFRSRVDHRV*RACRSRRGSRPMRW
Trigger: CCACCGCATGGGCCGGGACCCCCTCCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGCAGTAGAGACGGAGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS GCA 90 bp GAGGGTCCCAGAAGCACATGGGCTGCGTGTCCTCGAGGCAGCTGGTaGCCACTCCAGGGAAGGGGTGGCCCCAGCTGCTGCACGGAGCAC +
Preference number: 5 (lower is better)
Translates to: EGPRSTWAACPRGSW*PLQGRGGPSCCTEH
Trigger: GTGCTCCGTGCAGCAGCTGGGGCCACCCCTTCCCTGGAGTGGGCACCAGCTGCCTCGAGGACACGCAGCCCATGTGCTTCTGGGACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS CCA 90 bp GAGGAGGGTCCCAGAAGCACATGGGCTGCGTGTCCTCGAGGCAGCTaGTGCCCACTCCAGGGAAGGGGTGGCCCCAGCTGCTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: EEGPRSTWAACPRGS*CPLQGRGGPSCCTE
Trigger: CTCCGTGCAGCAGCTGGGGCCACCCCTTCCCTGGAGTGGGCACCAGCTGCCTCGAGGACACGCAGCCCATGTGCTTCTGGGACCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS-3UTR CAA 90 bp GGCTGCCCCGACGTCAGAATGATCCTCCCCTCCTGCCTGGCAACCTCGGCCGCCTCCACGAGGGCCACCTaGTCCTGGAGGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GCPDVRMILPSCLATSAASTRAT*SWRSSG
Trigger: CCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGA...GGCGGCCGAGGTTGCCAGGCAGGAGGGGAGGATCATTCTGACGTCGGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CAA 90 bp GGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCAGGCAGTAGGCGTCGGGGCCTCCGGTCCCAGTaGGACAGCTGCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GRALCTGLGAPPAGSRRRGLRSQ*DSCCVL
Trigger: CAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCC...CCGACGCCTACTGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CAA 90 bp CGCAGCCGGCAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCTGCTTGAGCACAGCCTaGGCCTGCTGCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RSRQPLLGQQEFHGTLGGCLSTA*ACCWAF
Trigger: GAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCA...GCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTGCCGGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS GCA 90 bp AACCTCGGCCGCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTaGATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NLGRPAVVFTIAQHA*IHTETAEAPCQPLQ
Trigger: CTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGCGGCCGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000487745.5
CDS-3UTR CAA 90 bp CCCTCGTGGTGGAGGCGGTGGACGTGTGCCAGCAGGCAGCTCCTGTCTGCATCCTCCACGAGGGCCACCTaGTCCTGGAGGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PSWWRRWTCASRQLLSASSTRAT*SWRSSG
Trigger: CCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGA...GGATGCAGACAGGAGCTGCCTGCTGGCACACGTCCACCGCCTCCACCACGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CAA 90 bp CGGCCACCTGCAGGAGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGGGACGTGCCCAGTTTTaGCAGGTCCCCCACCATCCC +
Preference number: 5 (lower is better)
Translates to: RPPAGVTAEAGPQQQTQVGRAQF*QVPHHP
Trigger: GGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC...CACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACTCCTGCAGGTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CAA 90 bp GCCTGGCTGTCGGGGGCAGGGTCCCAGGGGCCACAGACGCGGATGTCCTGCTCAGGATGGGAATGTTTCTaGGCCTCGGGGGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AWLSGAGSQGPQTRMSCSGWECF*ASGEGE
Trigger: CTCTCCCTCCCCCGAGGCCAAGAAACATTCCCATCC...TGAGCAGGACATCCGCGTCTGTGGCCCCTGGGACCCTGCCCCCGACAGCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CAA 90 bp CTCCGACAGGTGGAAGCGGGCGGGCTCTCTGCACAGGGCTTGGTGCACCTCCAGCTCTCTGCACAGGGCTaGGTGCACCTCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LRQVEAGGLSAQGLVHLQLSAQG*VHLQQA
Trigger: TGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAG...CTGGAGGTGCACCAAGCCCTGTGCAGAGAGCCCGCCCGCTTCCACCTGTCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CAA 90 bp CGGCCACCTGCAGGAGTGACGGCCGAGGCCGGCCCCCAGCAACAAACACAGGTGCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCC +
Preference number: 5 (lower is better)
Translates to: RPPAGVTAEAGPQQQTQVRWSSP*PSMRAS
Trigger: GGATGCACGCATGCTGGGCAATGGTGAAGACCACCG...CACCTGTGTTTGTTGCTGGGGGCCGGCCTCGGCCGTCACTCCTGCAGGTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS GCA 90 bp GCGCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTaGTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ALGLRRTAPADARPA*SAPSDSASPGSRRS
Trigger: TGACCTCCTTGAGCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS GCA 90 bp CACAGCGCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTaGCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: HSAGATPYRSCRRKT*LLSAFGLSFSRLKE
Trigger: CTCCTTGAGCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGCGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS CCA 90 bp ATGCAGGGCCCAGCACAAGCGAGGGTCTCCCTCCCCGCAAGGTCCTaGAGTCCATGGGTCCAGGATGGCCTTGAGTGTCAGGCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: MQGPAQARVSLPARS*SPWVQDGLECQAGR
Trigger: CCTTCCCGCCTGACACTCAAGGCCATCCTGGACCCATGGACTCCAGGACCTTGCGGGGAGGGAGACCCTCGCTTGTGCTGGGCCCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478350.1
CDS-3UTR CAA 90 bp CCTGCAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGACTCAGCTTCTCCAGGCGGCCTCCGGTCCCAGTaGGACAGCTGCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: PADARPACSAPSDSASPGGLRSQ*DSCCVL
Trigger: CAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCC...GCCTGGAGAAGCTGAGTCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp GCCCTGCGGTGGTCTTCACCATTGCCCAGCATGCGTGCATCCACACCGAGACAGACCTGGGCCCGGAGCTaGTGGAATGGCTGCCCCGAC +
Preference number: 5 (lower is better)
Translates to: ALRWSSPLPSMRASTPRQTWARS*WNGCPD
Trigger: GTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGT...CTGTCTCGGTGTGGATGCACGCATGCTGGGCAATGGTGAAGACCACCGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS GCA 90 bp AGTGAGTATCCCAGGCCAAACTCTGTGGCTCAGGCCGCGGCTGGCTaGCCCCAGGACCCCCTCCTGCTCACGAACCTCCACAAACCGCTT +
Preference number: 5 (lower is better)
Translates to: SEYPRPNSVAQAAAG*PQDPLLLTNLHKPL
Trigger: AAGCGGTTTGTGGAGGTTCGTGAGCAGGAGGGGGTCCTGGGGGCAGCCAGCCGCGGCCTGAGCCACAGAGTTTGGCCTGGGATACTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS-3UTR CAA 90 bp GGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGGTCACTGTGGGAGGGACGTGCCCAGTTTTaGCAGGTCCCCCACCATCCC +
Preference number: 5 (lower is better)
Translates to: GSKSSMAHWAAVTGSLWEGRAQF*QVPHHP
Trigger: GGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC...CTCCCACAGTGACCCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CAA 90 bp TGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCAGGCTCTCTGCACAGGGCTaGGTGCACCTCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: WHCRSAPSCLVRSSHEARLSAQG*VHLQQA
Trigger: TGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAG...CCTGGCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478344.6
ENST00000491734.6
CDS-3UTR CAA 90 bp CTCCAGCATGTCTCGGAAGTGGGTGGCAACACGACCCAGGTGGGAGCCGTCCCAACCTCCACAAACCGCTaGTGGCACAGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LQHVSEVGGNTTQVGAVPTSTNR*WHRCRR
Trigger: CCTGCGGCACCTGTGCCACAAGCGGTTTGTGGAGGT...TGGGACGGCTCCCACCTGGGTCGTGTTGCCACCCACTTCCGAGACATGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS TCA 90 bp CAGACCCTCCAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTaGAAGGCAGCTTCTCTGTCCCTCGGGACTCTGCTTCCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: QTLQRMPLGESGQTG*KAASLSLGTLLPLP
Trigger: CGGGAGCGGAAGCAGAGTCCCGAGGGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTGGAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS-3UTR CAA 90 bp CATCCACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAGCATGTTGTCACCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCC +
Preference number: 5 (lower is better)
Translates to: HPHRDSGGSVPAPAACCHRWSSP*PSMRAS
Trigger: GGATGCACGCATGCTGGGCAATGGTGAAGACCACCG...GTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCACCTGGGCCCGGAGCTaGTGGAATGGCTGCCCCGAC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSTWARS*WNGCPD
Trigger: GTCGGGGCAGCCATTCCACAAGCTCCGGGCCCAGGT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CCTGACCCAGCGCGGGAGGGCCTCTCTAGAACACGCCAGAGGTGGCCATGTGGACTTGTGGAGCTGGCCTaGTTGACAGAGCTGGACACG +
Preference number: 5 (lower is better)
Translates to: PDPAREGLSRTRQRWPCGLVELA*LTELDT
Trigger: CGTGTCCAGCTCTGTCAACAAGGCCAGCTCCACAAG...TCCACATGGCCACCTCTGGCGTGTTCTAGAGAGGCCCTCCCGCGCTGGGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CAA 90 bp CAGCCGCTCCTCGGGCAGCAAGAGTTCCATGGCACACTGGGCGGCCGTGACTGGCACTCTCGGGGCACCTaGACCAGATATAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: QPLLGQQEFHGTLGGRDWHSRGT*TRYRAG
Trigger: TCCTGCTCTATATCTGGTCAAGGTGCCCCGAGAGTG...CCAGTCACGGCCGCCCAGTGTGCCATGGAACTCTTGCTGCCCGAGGAGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTCCACGAGGGCCACCTaGTCCTGGAGGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSTRAT*SWRSSG
Trigger: CCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGCCTCCGGTCCCAGTaGGACAGCTGCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGLRSQ*DSCCVL
Trigger: CAAGACGCAGCAGCTGTCCAACTGGGACCGGAGGCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CTCTTCTGGGGCTACGCCGTACCGCTCCTGCAGACGCAAGACCTGCCTGCTCAGAGCCCCTGCAGCATGTaGTCACACACCACACGGAAG +
Preference number: 5 (lower is better)
Translates to: LFWGYAVPLLQTQDLPAQSPCSM*SHTTRK
Trigger: CTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCT...CTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS CCA 90 bp ACCTCAGGGTACCGTCTGGCAACGTCCTTGATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGGACCAGCAGCCTCCTCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TSGYRLATSLMSKPG*HQESMRTSSLLWRS
Trigger: GGACCTCCAGAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGACGGTACCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340951.9
ENST00000490886.5
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCGGACGTGCCCAGTTTTaGCAGGTCCCCCACCATCCC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSGRAQF*QVPHHP
Trigger: GGGATGGTGGGGGACCTGCAAAAACTGGGCACGTCC...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCTCTCTGCACAGGGCTaGGTGCACCTCCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSLSAQG*VHLQQA
Trigger: TGCCTGCTGGAGGTGCACCAAGCCCTGTGCAGAGAG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGCTTGAGCACAGCCTaGGCCTGCTGCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSCLSTA*ACCWAF
Trigger: GAAGGCCCAGCAGCAGGCCAAGGCTGTGCTCAAGCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp TTGGTGGCACTGCAGGAGTGCACCCTCGTGTCTGGTCAGGTCTTCCCACGAGGCCGCACGTTGAAATGCTaGAGCACAGCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LVALQECTLVSGQVFPRGRTLKC*STALAC
Trigger: GCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCG...GCCTCGTGGGAAGACCTGACCAGACACGAGGGTGCACTCCTGCAGTGCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CAA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCACACAGACCTTTCAGCTaGCTTCACTCTCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPHRPFS*LHSRGT
Trigger: GGTGCCCCGAGAGTGAAGCAAGCTGAAAGGTCTGTG...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS GCA 90 bp GGGGCAAGAAGCAGCTCCTACTTGATATGTCTGTGCACCCTGCAGTaGGCAGTGAGTATCCCAGGCCAAACTCTGTGGCTCAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GARSSSYLICLCTLQ*AVSIPGQTLWLRPR
Trigger: CCGCGGCCTGAGCCACAGAGTTTGGCCTGGGATACTCACTGCGCACTGCAGGGTGCACAGACATATCAAGTAGGAGCTGCTTCTTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGTCTGGCAACGTCCTaGATGTCAAAGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRLATS*MSKPGW
Trigger: CCAGCCCGGCTTTGACATCAAGGACGTTGCCAGACG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTTCTCCACAAACCGCTaGTGGCACAGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSFSTNR*WHRCRR
Trigger: CCTGCGGCACCTGTGCCACAAGCGGTTTGTGGAGAA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGGTGGTCTTCACCATaGCCCAGCATGCGTGCATCC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRWSSP*PSMRAS
Trigger: GGATGCACGCATGCTGGGCAATGGTGAAGACCACCG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGTGGGTGACACGCACGTaGAAATGCTTGAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQWVTRT*KCLSTA
Trigger: GGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCA...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CAA 90 bp CTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAACACGTGGCCCTCCAAAACTGGCAACGTCCTaGATGTCAAAGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLVAARVPGRPEGTRGPPKLATS*MSKPGW
Trigger: CCAGCCCGGCTTTGACATCAAGGACGTTGCCAGTTT...TGGAGGGCCACGTGTTCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCAGCCCCTGCAGCATGTaGTCACACACCACACGGAAG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSSPCSM*SHTTRK
Trigger: CTTCCGTGTGGTGTGTGACAACATGCTGCAGGGGCT...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCGCACGTTGAAATGCTaGAGCACAGCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSRTLKC*STALAC
Trigger: GCAGGCCAAGGCTGTGCTCAAGCATTTCAACGTGCG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp GCCGGTGCTGACGCTTTCTGCAGGCCGGGTGGCTTCCGTGCCCCTGGTCTCTCTCACTTTCCATGTTTATaGTCTGGCTGTCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: AGADAFCRPGGFRAPGLSHFPCL*SGCPQK
Trigger: CTTCTGAGGACAGCCAGACAATAAACATGGAAAGTG...AGAGAGACCAGGGGCACGGAAGCCACCCGGCCTGCAGAAAGCGTCAGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CAA 90 bp CCTTCTCCTGTCCCGATGATGCCTCCTGACCCAGCGCGGGAGGGCCTCTCTAGACTGCTAGCTGGGGTGTaGCACTTTGAAAACATCCCA +
Preference number: 5 (lower is better)
Translates to: PSPVPMMPPDPAREGLSRLLAGV*HFENIP
Trigger: TGGGATGTTTTCAAAGTGCAACACCCCAGCTAGCAG...TCTAGAGAGGCCCTCCCGCGCTGGGTCAGGAGGCATCATCGGGACAGGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CAA 90 bp CACACCGAGACAGCGGAGGCTCCGTGCCAGCCCCTGCAGCATGTTGTCACACACGAATTCACTAAGAGCTaGGAACAGAAGACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: HTETAEAPCQPLQHVVTHEFTKS*EQKTSA
Trigger: GGCCGAGGTCTTCTGTTCCAAGCTCTTAGTGAATTC...GTGTGTGACAACATGCTGCAGGGGCTGGCACGGAGCCTCCGCTGTCTCGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCTGGGTGACACGCACGTaGAAATGCTTGAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSWVTRT*KCLSTA
Trigger: GGCTGTGCTCAAGCATTTCAACGTGCGTGTCACCCA...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS-3UTR CAA 90 bp GACCTTTCCACAGCCCGTGCAGCAGTAGAAGCACCGCAGCCCAGGTGTCCTCAGAGAAGCAGCTCCTACTaGATATGTCTGTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: DLSTARAAVEAPQPRCPQRSSSY*ICLCTL
Trigger: CAGGGTGCACAGACATATCAAGTAGGAGCTGCTTCT...CTGAGGACACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491734.6
CDS-3UTR CAA 90 bp CGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTTCTCCACGAGGGCCACCTaGTCCTGGAGGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RLPCLHEKSHHGELFSFFSTRAT*SWRSSG
Trigger: CCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGA...GAAGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS-3UTR CAA 90 bp CATAGCGCTCCACGAGGGCCACCTTGTCCTGGAGGAGCAGTGGGATGCTCATCTAAGAAAGCAGTACGGTaGCCATGCCTGCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: HSAPRGPPCPGGAVGCSSKKAVR*PCLHEK
Trigger: CTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTT...AGATGAGCATCCCACTGCTCCTCCAGGACAAGGTGGCCCTCGTGGAGCGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS GCA 90 bp TCTTCCAGCTCTGGGGCAAGAAGCAGCTCCTACTTGATATGTCTGTaGACCCTGCAGTGCGCAGTGAGTATCCCAGGCCAAACTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSSSGARSSSYLICL*TLQCAVSIPGQTLW
Trigger: CCACAGAGTTTGGCCTGGGATACTCACTGCGCACTGCAGGGTGCACAGACATATCAAGTAGGAGCTGCTTCTTGCCCCAGAGCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS-3UTR CAA 90 bp GCTGGCCTTGTTGACAGAGCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGGTGGAGCTGGCCTTGTaGACAGAGCTGGACACGAAC +
Preference number: 5 (lower is better)
Translates to: AGLVDRAGHEPCKGRCLKVELAL*TELDTN
Trigger: GTTCGTGTCCAGCTCTGTCAACAAGGCCAGCTCCAC...CTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGCTCTGTCAACAAGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS-3UTR CAA 90 bp CCTGGGCTCCCTGCCCTGTTGGTGGCTGCGAGAGTGCCAGGACGTCCAGAAGGAGGAAGTAGCAAATACTaGTTATGTCAGAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: PGLPALLVAARVPGRPEGGSSKY*LCQNLC
Trigger: GCACAGATTCTGACATAACAAGTATTTGCTACTTCC...TCCTTCTGGACGTCCTGGCACTCTCGCAGCCACCAACAGGGCAGGGAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp CACGGCCATGGGCCCAGCAGTCGGGCACTTTCCATGTTTATTGTCTGGCTGTCCCACTTTCCATGTTTATaGTCTGGCTGTCCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: HGHGPSSRALSMFIVWLSHFPCL*SGCPQK
Trigger: CTTCTGAGGACAGCCAGACAATAAACATGGAAAGTG...GGACAGCCAGACAATAAACATGGAAAGTGCCCGACTGCTGGGCCCATGGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340951.9
ENST00000491734.6
CDS TCA 90 bp CACACATACATGCACACACATGCACACACATGCACATGGCTTCCCTaGATCCATACAGGCACCATATGGGCTCCTTGTCAGGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: HTYMHTHAHTCTWLP*IHTGTIWAPCQVLP
Trigger: AGGCAGCACCTGACAAGGAGCCCATATGGTGCCTGTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCATGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTAGGCAGGCCGATGGCTaGAGCTCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: YGCHACMRRATTENYFRSRQADG*SSGVQD
Trigger: GTCTTGAACTCCTGAGCTCAAGCCATCGGCCTGCCT...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS-3UTR CAA 90 bp GCTGGCCTTGTTGACAGAGCTGGACACGAACCATGTAAGGGCAGATGCCTAAAGCTGGGGTGTTGCACTTaGAAAACATCCCACTCTGCT +
Preference number: 5 (lower is better)
Translates to: AGLVDRAGHEPCKGRCLKLGCCT*KTSHSA
Trigger: AGCAGAGTGGGATGTTTTCAAAGTGCAACACCCCAG...CTTTAGGCATCTGCCCTTACATGGTTCGTGTCCAGCTCTGTCAACAAGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465160.2
CDS GCA 90 bp TTCCCTGAATCCATACAGGCACCATATGGGCTCCTTGTCAGGTGCTaGCTTTTCTCTGTAATTGCTGACAGACGTCACACACCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: FPESIQAPYGLLVRC*LFSVIADRRHTPSA
Trigger: AGCACTTGGTGTGTGACGTCTGTCAGCAATTACAGAGAAAAGGCAGCACCTGACAAGGAGCCCATATGGTGCCTGTATGGATTCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS-3UTR CAA 90 bp TACGGTTGCCATGCCTGCATGAGAAGAGCCACCACGGAGAATTATTTTCGTTCTAAGAAAGCAGTACGGTaGCCATGCCTGCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: YGCHACMRRATTENYFRSKKAVR*PCLHEK
Trigger: CTTCTCATGCAGGCATGGCAACCGTACTGCTTTCTT...AGAACGAAAATAATTCTCCGTGGTGGCTCTTCTCATGCAGGCATGGCAACCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460390.6
ENST00000479452.5
CDS CCA 72 bp GCGCTCGCCAGCGGCAGGGTCACCAGCGGGATCTCCTaGGTCCATCCTCAGGGCCGGGCCGAGGACGCTGGC +
Preference number: 6 (lower is better)
Translates to: ALASGRVTSGIS*VHPQGRAEDAG
Trigger: GCCAGCGTCCTCGGCCCGGCCCTGAGGATGGACCCAGGAGATCCCGCTGGTGACCCTGCCGCTGGCGAGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340951.9
ENST00000460390.6
ENST00000465160.2
ENST00000475006.1
ENST00000479452.5
ENST00000490886.5
CDS CCA 72 bp GACCGCCCCACACCGTCCACGCCCGGCGCGGAACCTTaGCCCGACCGCAGCCGCTGGCCCGGAGGGCTTTAT +
Preference number: 6 (lower is better)
Translates to: DRPTPSTPGAEP*PDRSRWPGGLY
Trigger: ATAAAGCCCTCCGGGCCAGCGGCTGCGGTCGGGCCAAGGTTCCGCGCCGGGCGTGGACGGTGTGGGGCGGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460390.6
CDS GCA 72 bp GCCAGGCCTGCGGGACCCTCAGCCCCCGCTGGGAAATaGAGGGCCCAGCACAAGCGAGGGTCTCCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: ARPAGPSAPAGK*RAQHKRGSPSP
Trigger: CGGGGAGGGAGACCCTCGCTTGTGCTGGGCCCTGCATTTCCCAGCGGGGGCTGAGGGTCCCGCAGGCCTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484392.5
CDS CCA 72 bp GCCGCAGGGCCGCCAGGCGCTGCTGAATGGCCGCGTTaGGACACAGCGCTGGGGCTACGCCGTACCGCTCCT +
Preference number: 6 (lower is better)
Translates to: AAGPPGAAEWPR*DTALGLRRTAP
Trigger: AGGAGCGGTACGGCGTAGCCCCAGCGCTGTGTCCCAACGCGGCCATTCAGCAGCGCCTGGCGGCCCTGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS CCA 72 bp GGCACAGGTGCCGCAGGGCCGCCAGGCGCTGCTGAATaGCCGCGTTGGGACACAGCGCTGGGGCTACGCCGT +
Preference number: 6 (lower is better)
Translates to: GTGAAGPPGAAE*PRWDTALGLRR
Trigger: ACGGCGTAGCCCCAGCGCTGTGTCCCAACGCGGCCATTCAGCAGCGCCTGGCGGCCCTGCGGCACCTGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS CCA 72 bp CCACCAGGCCAGGCCTGCGGGACCCTCAGCCCCCGCTaGGAAATGCAGGGCCCAGCACAAGCGAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PPGQACGTLSPR*EMQGPAQARVS
Trigger: GGAGACCCTCGCTTGTGCTGGGCCCTGCATTTCCCAGCGGGGGCTGAGGGTCCCGCAGGCCTGGCCTGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484392.5
CDS CCA 72 bp AGCCCCCACCCGGCCCCACAGGCAGCTCCGCTGGGTTaGTTCGGGTGGCACGGACGCTGCCGTCTGCACATG +
Preference number: 6 (lower is better)
Translates to: SPHPAPQAAPLG*FGWHGRCRLHM
Trigger: CATGTGCAGACGGCAGCGTCCGTGCCACCCGAACCAACCCAGCGGAGCTGCCTGTGGGGCCGGGTGGGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490886.5
CDS TCA 72 bp TTGTGGCACAGGTGCCGCAGGGCCGCCAGGCGCTGCTaGATGGCCGCGTTGGGACACAGCGCTGGGGCTACG +
Preference number: 6 (lower is better)
Translates to: LWHRCRRAARRC*MAALGHSAGAT
Trigger: CGTAGCCCCAGCGCTGTGTCCCAACGCGGCCATTCAGCAGCGCCTGGCGGCCCTGCGGCACCTGTGCCACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS GCA 72 bp TACGTGGAAGCCGCCCGCATTCTTCAGGACGTCCGCTaGCCTTCCGGCCGGCTCTGCGCTGGCACCGGGCTG +
Preference number: 6 (lower is better)
Translates to: YVEAARILQDVR*PSGRLCAGTGL
Trigger: CAGCCCGGTGCCAGCGCAGAGCCGGCCGGAAGGGCAGCGGACGTCCTGAAGAATGCGGGCGGCTTCCACGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490886.5
CDS CCA 72 bp CCGGCCCCACAGGCAGCTCCGCTGGGTTGGTTCGGGTaGCACGGACGCTGCCGTCTGCACATGGTCGGTCCA +
Preference number: 6 (lower is better)
Translates to: PAPQAAPLGWFG*HGRCRLHMVGP
Trigger: TGGACCGACCATGTGCAGACGGCAGCGTCCGTGCCACCCGAACCAACCCAGCGGAGCTGCCTGTGGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490886.5
CDS GCA 72 bp AGAAGCACATGGGCTGCGTGTCCTCGAGGCAGCTGGTaGCCACTCCAGGGAAGGGGTGGCCCCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSTWAACPRGSW*PLQGRGGPSCC
Trigger: GCAGCAGCTGGGGCCACCCCTTCCCTGGAGTGGGCACCAGCTGCCTCGAGGACACGCAGCCCATGTGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS GCA 72 bp TTGGGACACAGCGCTGGGGCTACGCCGTACCGCTCCTaGAGACGCAAGACCTGCCTGCTCAGCGCCTTCGGA +
Preference number: 6 (lower is better)
Translates to: LGHSAGATPYRS*RRKTCLLSAFG
Trigger: TCCGAAGGCGCTGAGCAGGCAGGTCTTGCGTCTGCAGGAGCGGTACGGCGTAGCCCCAGCGCTGTGTCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340951.9
ENST00000472958.5
ENST00000490886.5
ENST00000491734.6
CDS CCA 72 bp TTCTCTGTCCCTCGGGACTCTGCTTCCGCTCCCGCGTaGACCACAGGGTCTGCAGGGCCTGCAGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: FSVPRDSASAPA*TTGSAGPAGAG
Trigger: TCCTGCTCCTGCAGGCCCTGCAGACCCTGTGGTCCACGCGGGAGCGGAAGCAGAGTCCCGAGGGACAGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS CCA 72 bp CCAGCACAAGCGAGGGTCTCCCTCCCCGCAAGGTCCTaGAGTCCATGGGTCCAGGATGGCCTTGAGTGTCAG +
Preference number: 6 (lower is better)
Translates to: PAQARVSLPARS*SPWVQDGLECQ
Trigger: CTGACACTCAAGGCCATCCTGGACCCATGGACTCCAGGACCTTGCGGGGAGGGAGACCCTCGCTTGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478350.1
ENST00000484392.5
CDS TCA 72 bp AGCCGTCCACCTGAGGCCTGCAGCATCTGTCCTGCCTaGGGTCAAGGTTCCACAGGACCAAAGCGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SRPPEACSICPA*GQGSTGPKRLR
Trigger: TCTCAGCCGCTTTGGTCCTGTGGAACCTTGACCTCAGGCAGGACAGATGCTGCAGGCCTCAGGTGGACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487745.5
CDS CAA 72 bp GGACACGGGGTTCGTGTACGTGCGGCTGCGTCTGATTaGGGGTCAGCCCATGAGGAGGATGGTGGTTTAGGG +
Preference number: 6 (lower is better)
Translates to: GHGVRVRAAASD*GSAHEEDGGLG
Trigger: CCCTAAACCACCATCCTCCTCATGGGCTGACCCCAAATCAGACGCAGCCGCACGTACACGAACCCCGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS TCA 72 bp CACCAGGCCCTGCACATGGTCGGTCCAGTTCTCCTGTaGCAGGCTCTTCTCCACAAACCGCTTGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: HQALHMVGPVLL*QALLHKPLVAQ
Trigger: CTGTGCCACAAGCGGTTTGTGGAGAAGAGCCTGTCACAGGAGAACTGGACCGACCATGTGCAGGGCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340951.9
CDS TCA 72 bp CAAAGGATGCCCCTCGGGGAAAGTGGCCAGACAGGGTaGAAGGCAGCTTCTCTGTCCCTCGGGACTCTGCTT +
Preference number: 6 (lower is better)
Translates to: QRMPLGESGQTG*KAASLSLGTLL
Trigger: AAGCAGAGTCCCGAGGGACAGAGAAGCTGCCTTTCACCCTGTCTGGCCACTTTCCCCGAGGGGCATCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475006.1
CDS TCA 72 bp CGCTGCCGTCTGCACATGGTCGGTCCAGTTCTCCTGTaGCAGGCTCTTCTCCACAAACCGCTTGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: RCRLHMVGPVLL*QALLHKPLVAQ
Trigger: CTGTGCCACAAGCGGTTTGTGGAGAAGAGCCTGTCACAGGAGAACTGGACCGACCATGTGCAGACGGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490886.5
CDS CCA 72 bp TACCGTCTGGCAACGTCCTTGATGTCAAAGCCGGGCTaGCACCAGGAATCCATGAGGACCAGCAGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: YRLATSLMSKPG*HQESMRTSSLL
Trigger: GAGGAGGCTGCTGGTCCTCATGGATTCCTGGTGCCAGCCCGGCTTTGACATCAAGGACGTTGCCAGACGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340951.9
ENST00000490886.5
ENST00000491734.6
CDS CAA 90 bp CCTGTGACAGGCTCTTCCAGCTCTGGGGCAAGAAGCAGCTCCTACTaGATATGTCTGTGCACCCTGCAGTGCGCAGTGAGTATCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PVTGSSSSGARSSSY*ICLCTLQCAVSIPG
Trigger: GCCTGGGATACTCACTGCGCACTGCAGGGTGCACAGACATATCAAGTAGGAGCTGCTTCTTGCCCCAGAGCTGGAAGAGCCTGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS CAA 72 bp GGCTCTTCCAGCTCTGGGGCAAGAAGCAGCTCCTACTaGATATGTCTGTGCACCCTGCAGTGCGCAGTGAGT +
Preference number: 6 (lower is better)
Translates to: GSSSSGARSSSY*ICLCTLQCAVS
Trigger: ACTCACTGCGCACTGCAGGGTGCACAGACATATCAAGTAGGAGCTGCTTCTTGCCCCAGAGCTGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS GCA 72 bp AGCAGCTCCTACTTGATATGTCTGTGCACCCTGCAGTaGGCAGTGAGTATCCCAGGCCAAACTCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSSYLICLCTLQ*AVSIPGQTLWL
Trigger: GAGCCACAGAGTTTGGCCTGGGATACTCACTGCGCACTGCAGGGTGCACAGACATATCAAGTAGGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472958.5
ENST00000491734.6
CDS TCA 72 bp ATGCACACACATGCACACACATGCACATGGCTTCCCTaGATCCATACAGGCACCATATGGGCTCCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: MHTHAHTCTWLP*IHTGTIWAPCQ
Trigger: CTGACAAGGAGCCCATATGGTGCCTGTATGGATTCAGGGAAGCCATGTGCATGTGTGTGCATGTGTGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS GCA 72 bp TCCATACAGGCACCATATGGGCTCCTTGTCAGGTGCTaGCTTTTCTCTGTAATTGCTGACAGACGTCACACA +
Preference number: 6 (lower is better)
Translates to: SIQAPYGLLVRC*LFSVIADRRHT
Trigger: TGTGTGACGTCTGTCAGCAATTACAGAGAAAAGGCAGCACCTGACAAGGAGCCCATATGGTGCCTGTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478344.6
CDS CCA 72 bp ACTCCCGACCTCCAACAAACACTGTTTATAGAGACCTaGGCGTTATCCAAGTTTGAACCTAAACAATTTACA +
Preference number: 6 (lower is better)
Translates to: TPDLQQTLFIET*ALSKFEPKQFT
Trigger: TGTAAATTGTTTAGGTTCAAACTTGGATAACGCCCAGGTCTCTATAAACAGTGTTTGTTGGAGGTCGGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475006.1