RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVA1A (Homo sapiens)

Ensembl gene IDs: ENSG00000115363

Ensembl transcript IDs: ENST00000233712.5, ENST00000393913.8, ENST00000410010.1, ENST00000410071.5, ENST00000410113.5, ENST00000432649.5, ENST00000452003.1, ENST00000485891.1, ENST00000486489.1, ENST00000486696.1, ENST00000490746.5

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTaGAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGT +
Preference number: 1 (lower is better)
Translates to: TILAELGSVPCAHCP*RRSPFQAASSGFRG
Trigger: ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
3UTR CCA 90 bp CAAGAGAAACCACAGTCGCGTTTCTCCGATCTCCATCCACAGTGTTaGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGAT +
Preference number: 1 (lower is better)
Translates to: QEKPQSRFSDLHPQC*RGFFSTIPRPGKGD
Trigger: ATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACGCGACTGTGGTTTCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR GCA 90 bp ATTGCATTTATTGGGTTAAGTTCACCCTGCTATTCCCAGCCCTCATaGTATAATGATCTTTCCTTTTGCAAAGGAATAACACAGAGCAAG +
Preference number: 1 (lower is better)
Translates to: IAFIGLSSPCYSQPS*YNDLSFCKGITQSK
Trigger: CTTGCTCTGTGTTATTCCTTTGCAAAAGGAAAGATCATTATAGCATGAGGGCTGGGAATAGCAGGGTGAACTTAACCCAATAAATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR CCA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAACCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SPSTVLERIFQHHSETWKPGGLQ*FPGSCC
Trigger: GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGG...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR GCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 2 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR GCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAATGTGCCCACTGTCCCTaGAGACGCTCTCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: FLLLHTFGQKGAILLARKCAHCP*RRSPFQ
Trigger: CTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCACA...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR TCA 90 bp ATCCCTGAGGTGCCAGTTAAAATGGACGAGGTTGCCCTTGCAACACAAGATTTTGGTGATGAACTGCTTTaGTTTTTCTACTTCTCCATA +
Preference number: 2 (lower is better)
Translates to: IPEVPVKMDEVALATQDFGDELL*FFYFSI
Trigger: TATGGAGAAGTAGAAAAATCAAAGCAGTTCATCACC...AAAATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCTCAGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR CAA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGGCTGGGTTCAGTTCCTaGTGCCCACTGTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPAGFSS*CPLSLQ
Trigger: CTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGC...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR CCA 72 bp CCACAGTCGCGTTTCTCCGATCTCCATCCACAGTGTTaGAGAGGATTTTTCAGCACCATTCCGAGACCTGGA +
Preference number: 3 (lower is better)
Translates to: PQSRFSDLHPQC*RGFFSTIPRPG
Trigger: TCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACGCGACTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR GCA 72 bp TCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTaGTTTGATTTTTCTACTTCTCCATACATTTGGCCA +
Preference number: 3 (lower is better)
Translates to: SAPFRDLERVMN*FDFSTSPYIWP
Trigger: TGGCCAAATGTATGGAGAAGTAGAAAAATCAAAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
3UTR-3UTR CAA 90 bp ATCCCTGAGGTGCCAGTTAAAATGGACGAGGTTGCCCTTGCAACACAAGATTTTCATGGATCATGCTATTaGAATCAGAATCACCTCCAT +
Preference number: 3 (lower is better)
Translates to: IPEVPVKMDEVALATQDFHGSCY*NQNHLH
Trigger: ATGGAGGTGATTCTGATTCAAATAGCATGATCCATG...AAAATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCTCAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCGCTGGCCTGGGGATGTaGGGTCCCGGCCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCAGLGM*GPGLGA
Trigger: AGCACCCAGGCCGGGACCCCACATCCCCAGGCCAGC...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCGCTGGCCTGGGGATGTaGGGTCCCGGCCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLAGLGM*GPGLGA
Trigger: AGCACCCAGGCCGGGACCCCACATCCCCAGGCCAGC...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTGGGTCAGGGCTGGCCTaGGGATGTGGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: CRRSPFQAASSGFRGPAAGSGLA*GCGVPA
Trigger: GGCCGGGACCCCACATCCCCAGGCCAGCCCTGACCC...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGCGCTGCCCGGGTCTTaGGCCGGCACCAGTACCTCG +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGALPGS*AGTSTS
Trigger: CGAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGC...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGCTCTGGGCTGTGGCTaGGGGGCAGCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRALGCG*GAASWD
Trigger: GTCCCATGAGGCTGCCCCTCAGCCACAGCCCAGAGC...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGCTCTGGGCTGTGGCTaGGGGGCAGCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGALGCG*GAASWD
Trigger: GTCCCATGAGGCTGCCCCTCAGCCACAGCCCAGAGC...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGAGGGGGACCCGGAGCTaGTCACTGAGGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGRGTRS*SLRGGH
Trigger: GTGTCCGCCCCTCAGTGATCAGCTCCGGGTCCCCCT...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSPGGLQ*FPGSCC
Trigger: GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGG...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGCTCTGGGCTGTGGCTaGGGGGCAGCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGALGCG*GAASWD
Trigger: GTCCCATGAGGCTGCCCCTCAGCCACAGCCCAGAGC...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCGACACGACAAAGCGCTaGCCGGGTCTTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCDTTKR*PGLGPA
Trigger: TGCCGGCCCAAGACCCGGGCAGCGCTTTGTCGTGTC...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRRSPFQAASSGFRGPAAPGGLQ*FPGSCC
Trigger: GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGG...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCCTACCTGCACTTTGCTaGGGCCCCGGCGCGCACTTC +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCLPALC*GPGAHF
Trigger: GAAGTGCGCGCCGGGGCCCCAGCAAAGTGCAGGTAG...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS-3UTR TCA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCCCGGAGCTGATCACTaGGGGGCGGACACGACAAAG +
Preference number: 4 (lower is better)
Translates to: PADALLSRRPPVVSGVLLPGADH*GADTTK
Trigger: CTTTGTCGTGTCCGCCCCTCAGTGATCAGCTCCGGG...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLSLQTLSFPGGLQWFPGSRDAA*SLCGKR
Trigger: TCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGA...CCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PADALLSRRPPVVSGVLLSRDAA*SLCGKR
Trigger: TCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGA...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSSRDAA*SLCGKR
Trigger: TCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGA...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRSDSGS*SRAPQA
Trigger: AGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCT...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCSDSGS*SRAPQA
Trigger: AGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCT...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGSRDAA*SLCGKR
Trigger: TCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGA...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSRCCRC*SLCPAG
Trigger: TCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCG...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPARCCRC*SLCPAG
Trigger: TCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCG...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCATCTCCACGTGCTCTaGGCTGTGGCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TVPADALLSRRPPVVSGVHLHVL*AVAEGQ
Trigger: CTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATG...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCCCGGGCACCTCAGGCTaGCCATTCATCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCPGTSG*PFIQIS
Trigger: GGAGATCTGGATGAATGGCCAGCCTGAGGTGCCCGG...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTCCGGGCACCTCAGGCTaGCCATTCATCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAPGTSG*PFIQIS
Trigger: GGAGATCTGGATGAATGGCCAGCCTGAGGTGCCCGG...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGSDSGS*SRAPQA
Trigger: AGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCT...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VPADALLSRRPPVVSGVLLEVLG*INVATL
Trigger: GAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAG...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPALEVLG*INVATL
Trigger: GAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAG...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGG +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAGTSWR*LAESTW
Trigger: CCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCC...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGG +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGGTSWR*LAESTW
Trigger: CCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCC...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CRRSPFQAASSGFRGPAARCCRC*SLCPAG
Trigger: TCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCG...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVPADALLSRRPPVVSGVRCCRC*SLCPAG
Trigger: TCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCG...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCTGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLCRCCR*CSLCPA
Trigger: TGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACA...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLSLQTLSFPGGLQWFPGCRCCR*CSLCPA
Trigger: TGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACA...CCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTGTGCCCACTGTCCCTaGAGACGCTCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCCAHCP*RRSPFQ
Trigger: CTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCACA...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGTGCCCACTGTCCCTaGAGACGCTCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLSLQTLSFPGGLQWFPGCAHCP*RRSPFQ
Trigger: CTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCACA...CCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 4 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 4 (lower is better)
Translates to: VPADALLSRRPPVVSGVLGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGCCAGAGGGGACCTCCTaGAGGTGCTTGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRPEGTS*RCLAES
Trigger: TGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGG...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGCCAGAGGGGACCTCCTaGAGGTGCTTGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGPEGTS*RCLAES
Trigger: TGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGG...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PLSLQTLSFPGGLQWFPGPLGCC*AKPSPR
Trigger: ACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGG...CCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGPLGCC*AKPSPR
Trigger: ACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGG...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSLLSLS*RNFFPG
Trigger: TCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAG...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTTGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGCRCCR*CSLCPA
Trigger: TGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACA...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCG +
Preference number: 4 (lower is better)
Translates to: PADALLSRRPPVVSGVLLWFPGS*CSLIVA
Trigger: CGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCA...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCTCCTTCTTCTCTTCTaGGGAGAGGTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSLLLLF*GEVGCQ
Trigger: CTGACACCCCACCTCTCCCCAGAAGAGAAGAAGGAG...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGCTCCTTCTTCTCTTCTaGGGAGAGGTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGLLLLF*GEVGCQ
Trigger: CTGACACCCCACCTCTCCCCAGAAGAGAAGAAGGAG...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCCTCCTTCTTCTCTTCTaGGGAGAGGTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSLLLLF*GEVGCQ
Trigger: CTGACACCCCACCTCTCCCCAGAAGAGAAGAAGGAG...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGPPGGA*LNQRGH
Trigger: GTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGG...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TVPADALLSRRPPVVSGVPPGGA*LNQRGH
Trigger: GTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGG...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCCAGAGGGGACCTCCTaGAGGTGCTTGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: TVPADALLSRRPPVVSGVPEGTS*RCLAES
Trigger: TGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGG...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCAGAGGGGACCTCCTaGAGGTGCTTGGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGPEGTS*RCLAES
Trigger: TGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGG...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: VPADALLSRRPPVVSGVLSAPAR*TRQKQS
Trigger: ACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGA...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCSAPAR*TRQKQS
Trigger: ACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGA...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CPCRRSPFQAASSGFRGPLLSLS*RNFFPG
Trigger: TCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAG...AGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCG +
Preference number: 4 (lower is better)
Translates to: TVPADALLSRRPPVVSGVWFPGS*CSLIVA
Trigger: CGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCA...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGGGTTAAGTTCACCCTaGTATTCCCAGCCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGGLSSP*YSQPSC
Trigger: GCATGAGGGCTGGGAATAGCAGGGTGAACTTAACCC...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCGGGTTAAGTTCACCCTaGTATTCCCAGCCCTCATGC +
Preference number: 4 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSGLSSP*YSQPSC
Trigger: GCATGAGGGCTGGGAATAGCAGGGTGAACTTAACCC...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGACTCTCCAAGCCCCTaGCAGCATCCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CPCRRSPFQAASSGFRGPDSPSP*QHPSSH
Trigger: ATGAGAGGATGGATGCTGGCAGGGGCTTGGAGAGTC...AGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410071.5
CDS-3UTR CCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGCGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACC +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGRLQSV*QEILIT
Trigger: GGTGATAAGGATCTCTTGCCACACAGACTGCAGGCG...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGCGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACC +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRRLQSV*QEILIT
Trigger: GGTGATAAGGATCTCTTGCCACACAGACTGCAGGCG...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTCGCTCAGGATTTTCTaGGACAAAGGAATAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSSLRIF*DKGIGR
Trigger: GCGGCCTATTCCTTTGTCTCAGAAAATCCTGAGCGA...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCGCTCCTCCGCAGAGGTaGACACATTCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLAPPQR*THSCSK
Trigger: CTTTGAACAAGAATGTGTTCACCTCTGCGGAGGAGC...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCGCTCCTCCGCAGAGGTaGACACATTCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCAPPQR*THSCSK
Trigger: CTTTGAACAAGAATGTGTTCACCTCTGCGGAGGAGC...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGGCTCCTCCGCAGAGGTaGACACATTCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VPADALLSRRPPVVSGVLAPPQR*THSCSK
Trigger: CTTTGAACAAGAATGTGTTCACCTCTGCGGAGGAGC...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR TCA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGGCTCCTCCGCAGAGGTaGACACATTCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PADALLSRRPPVVSGVLLAPPQR*THSCSK
Trigger: CTTTGAACAAGAATGTGTTCACCTCTGCGGAGGAGC...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATT +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRFPGSC*SLIVAI
Trigger: AATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAA...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATT +
Preference number: 4 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLFPGSC*SLIVAI
Trigger: AATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAA...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR GCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGGGTTAAGTTCACCCTaGTATTCCCAGCCCTCATGC +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGGLSSP*YSQPSC
Trigger: GCATGAGGGCTGGGAATAGCAGGGTGAACTTAACCC...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACC +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGRLQSV*QEILIT
Trigger: GGTGATAAGGATCTCTTGCCACACAGACTGCAGGCG...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp ATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCTCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILAELGSVPCAHCPCRRSPGGLQ*FPGSCC
Trigger: GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGG...AGAGCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCAAGGAGCAATCCTCCTaGCTAGAAAAGGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSKEQSS*LEKGHV
Trigger: GACATGCCCCTTTTCTAGCCAGGAGGATTGCTCCTT...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCAAGGAGCAATCCTCCTaGCTAGAAAAGGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSKEQSS*LEKGHV
Trigger: GACATGCCCCTTTTCTAGCCAGGAGGATTGCTCCTT...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGAAGGAGCAATCCTCCTaGCTAGAAAAGGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PADALLSRRPPVVSGVLLKEQSS*LEKGHV
Trigger: GACATGCCCCTTTTCTAGCCAGGAGGATTGCTCCTT...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTTGTTTGGCCCCAGTTaGCTTCTCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSLFGPS*LLRLSK
Trigger: CTTGGAGAGTCTGAGAAGCCAACTGGGGCCAAACAA...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410071.5
CDS-3UTR GCA 90 bp TGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATT +
Preference number: 4 (lower is better)
Translates to: CPCRRSPFQAASSGFRGPFPGSC*SLIVAI
Trigger: AATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAA...AGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGTTGTTTGGCCCCAGTTaGCTTCTCAGACTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRLFGPS*LLRLFV
Trigger: CACAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAA...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR CCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCTTGGCTGAATCAACGTaGCCACTCTCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSLAEST*PLSFFS
Trigger: AGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAA...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTTGGCTGAATCAACGTaGCCACTCTCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCLAEST*PLSFFS
Trigger: AGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAA...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGAGGTGCCAGTTAAAATaGACGAGGTTGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: VPADALLSRRPPVVSGVLRCQLK*TRLPLQ
Trigger: TTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCT...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTTGTTTGGCCCCAGTTaGCTTCTCAGACTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSLFGPS*LLRLFA
Trigger: AGCAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAA...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393913.8
CDS-3UTR TCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCAGGGGGACCCGGAGCTaGTCACTGAGGGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCRGTRS*SLRGGH
Trigger: GTGTCCGCCCCTCAGTGATCAGCTCCGGGTCCCCCT...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCVLKLV*PQLASQ
Trigger: CTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAAC...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCVLKLV*PQLASQ
Trigger: CTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAAC...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCPGGLQ*FPGSCC
Trigger: GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGG...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGGCGCTGCCCGGGTCTTaGGCCGGCACCAGTACCTCG +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSEALPGS*AGTSTS
Trigger: CGAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGC...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCTCAGACTCTTTGCTaGGGCCCCGGCGCGCACTTC +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRSQTLC*GPGAHF
Trigger: GAAGTGCGCGCCGGGGCCCCAGCAAAGAGTCTGAGA...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393913.8
CDS-3UTR TCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTATCATTCCTCCTCTGTaGCCTTCTTTAACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAIIPPL*PSLTGF
Trigger: AAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGAT...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR TCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTGCTCTGGGCTGTGGCTaGGGGGCAGCCTCATGGGAC +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLALGCG*GAASWD
Trigger: GTCCCATGAGGCTGCCCCTCAGCCACAGCCCAGAGC...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCGACACGACAAAGCGCTaGCCGGGTCTTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCDTTKR*PGLGPA
Trigger: TGCCGGCCCAAGACCCGGGCAGCGCTTTGTCGTGTC...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCGCTTCTCAGACTCTTTaGTGGGGCCCCGGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCASQTL*WGPGAH
Trigger: GTGCGCGCCGGGGCCCCAGCAAAGAGTCTGAGAAGC...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393913.8
CDS-3UTR GCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGTACCTACCTGCACTTTaGTGGGGCCCCGGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPYLPAL*WGPGAH
Trigger: GTGCGCGCCGGGGCCCCAGCAAAGTGCAGGTAGGTA...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS-3UTR CCA 90 bp TTCTCTGAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTTGTGGGGTCCCGGCCTaGGTGCTCACGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: FSEITILAELGSVPCAHCCGVPA*VLTDGG
Trigger: GCCGCCGTCCGTGAGCACCCAGGCCGGGACCCCACA...ACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCATCACCTCCATAGCATaGAGTCATTTAGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLITSIA*SHLGNC
Trigger: GCAATTTCCTAAATGACTTCATGCTATGGAGGTGAT...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCATCACCTCCATAGCATaGAGTCATTTAGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSITSIA*SHLGNC
Trigger: GCAATTTCCTAAATGACTTCATGCTATGGAGGTGAT...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCCCCGGAGCTGATCACTaGGGGGCGGACACGACAAAG +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCPGADH*GADTTK
Trigger: CTTTGTCGTGTCCGCCCCTCAGTGATCAGCTCCGGG...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGTGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTCRCCR*CSLCPA
Trigger: TGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACA...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCCATCTCCACGTGCTCTaGGCTGTGGCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCHLHVL*AVAEGQ
Trigger: CTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATG...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCCATCTCCACGTGCTCTaGGCTGTGGCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCHLHVL*AVAEGQ
Trigger: CTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATG...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HPQCWRGFFSTIPRPGKGSDSGS*SRAPQA
Trigger: AGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCT...ACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCSDSGS*SRAPQA
Trigger: AGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCT...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCACTTCTCCATACATTTaGCCAAAAAGGAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCTSPYI*PKRSNP
Trigger: AGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGT...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGATGAACTGCTTTaGTTTTTCTACTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRGDELL*FFYFSI
Trigger: TATGGAGAAGTAGAAAAATCAAAGCAGTTCATCACC...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTATCACCTCCATAGCATaGAGTCATTTAGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: CPCRRSPFQAASSGFRGPITSIA*SHLGNC
Trigger: GCAATTTCCTAAATGACTTCATGCTATGGAGGTGAT...AGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCATGGATCATGCTATTTaGATCAGAATCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCMDHAI*IRITSI
Trigger: TATGGAGGTGATTCTGATTCAAATAGCATGATCCAT...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTTTCTATTCATTTTCATaGATGAGGTGGGAACTACAC +
Preference number: 4 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAFYSFS*MRWELH
Trigger: GTGTAGTTCCCACCTCATTCATGAAAATGAATAGAA...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTTCTATTCATTTTCATaGATGAGGTGGGAACTACAC +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCFYSFS*MRWELH
Trigger: GTGTAGTTCCCACCTCATTCATGAAAATGAATAGAA...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGTTCTTTAACTGGCTTTaGTTGGTAACAGACACATCT +
Preference number: 4 (lower is better)
Translates to: PTVPADALLSRRPPVVSGFFNWL*LVTDTS
Trigger: AGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAA...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR GCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCG +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRWFPGS*CSLIVA
Trigger: CGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCA...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGTATTCCCAGCCCTCATaGTATAATGATCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRYSQPS*YNDLSF
Trigger: AAAGGAAAGATCATTATAGCATGAGGGCTGGGAATA...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTCATCTCCACGTGCTCTaGGCTGTGGCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLHLHVL*AVAEGQ
Trigger: CTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATG...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp ATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACCGGGCACCTCAGGCTaGCCATTCATCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: ITILAELGSVPCAHCPCRPGTSG*PFIQIS
Trigger: GGAGATCTGGATGAATGGCCAGCCTGAGGTGCCCGG...TCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CCA 90 bp TGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTACTTCTCCATACATTTaGCCAAAAAGGAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: CPCRRSPFQAASSGFRGPTSPYI*PKRSNP
Trigger: AGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGT...AGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTACTTCTCCATACATTTaGCCAAAAAGGAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGTSPYI*PKRSNP
Trigger: AGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGT...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCGGAAATTGCATTTATTaGGTTAAGTTCACCCTGCTA +
Preference number: 4 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCGNCIY*VKFTLL
Trigger: TAGCAGGGTGAACTTAACCCAATAAATGCAATTTCC...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAATGTGGGGTCCCGGCCTaGGTGCTCACGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: FLLLHTFGQKGAILLARKCGVPA*VLTDGG
Trigger: GCCGCCGTCCGTGAGCACCCAGGCCGGGACCCCACA...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAAGGGTCAGGGCTGGCCTaGGGATGTGGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FLLLHTFGQKGAILLARKGSGLA*GCGVPA
Trigger: GGCCGGGACCCCACATCCCCAGGCCAGCCCTGACCC...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTGGTGATGAACTGCTTTaGTTTTTCTACTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: CRRSPFQAASSGFRGPAAGDELL*FFYFSI
Trigger: TATGGAGAAGTAGAAAAATCAAAGCAGTTCATCACC...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGG +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPGTSWR*LAESTW
Trigger: CCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCC...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp ATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCTTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: ILAELGSVPCAHCPCRRSSAPAR*TRQKQS
Trigger: ACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGA...AGAGCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRSAPAR*TRQKQS
Trigger: ACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGA...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSERCCRC*SLCPAG
Trigger: TCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCG...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp ATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGATGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ITILAELGSVPCAHCPCRCRCCR*CSLCPA
Trigger: TGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACA...TCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTGTGCCCACTGTCCCTaGAGACGCTCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCCAHCP*RRSPFQ
Trigger: CTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCACA...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGGAAAGGGTGATGAACTaGTTTGATTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PLSLQTLSFPGGLQWFPGERVMN*FDFSTS
Trigger: AGAAGTAGAAAAATCAAAGCAGTTCATCACCCTTTC...CCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGCCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPPPGGA*LNQRGH
Trigger: GTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGG...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACC +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTRLQSV*QEILIT
Trigger: GGTGATAAGGATCTCTTGCCACACAGACTGCAGGCG...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
3UTR CAA 72 bp ACCACAGTCGCGTTTCTCCGATCTCCATCCACAGTGTaGGAGAGGATTTTTCAGCACCATTCCGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: TTVAFLRSPSTV*ERIFQHHSETW
Trigger: CCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACGCGACTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSELEVLG*INVATL
Trigger: GAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAG...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGTCGCTCAGGATTTTCTaGGACAAAGGAATAGGCCGC +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTSLRIF*DKGIGR
Trigger: GCGGCCTATTCCTTTGTCTCAGAAAATCCTGAGCGA...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCGCTCCTCCGCAGAGGTaGACACATTCTTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRAPPQR*THSCSK
Trigger: CTTTGAACAAGAATGTGTTCACCTCTGCGGAGGAGC...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCLLSLS*RNFFPG
Trigger: TCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAG...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPLLSLS*RNFFPG
Trigger: TCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAG...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp ACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATT +
Preference number: 4 (lower is better)
Translates to: TILAELGSVPCAHCPCRRFPGSC*SLIVAI
Trigger: AATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAA...GCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR GCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCG +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCWFPGS*CSLIVA
Trigger: CGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCA...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTTCAGTTCCTTGTaGCCACTGTCCCTGCAGACG +
Preference number: 4 (lower is better)
Translates to: SPSTVLERIFQHHSETWKGFSSL*PLSLQT
Trigger: CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCC...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTCTCCTTCTTCTCTTCTaGGGAGAGGTGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: HPQCWRGFFSTIPRPGKGLLLLF*GEVGCQ
Trigger: CTGACACCCCACCTCTCCCCAGAAGAGAAGAAGGAG...ACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLPLGCC*AKPSPR
Trigger: ACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGG...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGAGGTGCCAGTTAAAATaGACGAGGTTGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTRCQLK*TRLPLQ
Trigger: TTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCT...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGTCGCTCAGGATTTTCTaGGACAAAGGAATAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPSLRIF*DKGIGR
Trigger: GCGGCCTATTCCTTTGTCTCAGAAAATCCTGAGCGA...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLSAPAR*TRQKQS
Trigger: ACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGA...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp ATCCCTGAGGTGCCAGTTAAAATGGACGAGGTTGCCCTTGCAACACAAGATTTTCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: IPEVPVKMDEVALATQDFLLSLS*RNFFPG
Trigger: TCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAG...AAAATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCTCAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CGTTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATT +
Preference number: 4 (lower is better)
Translates to: RFSDLHPQCWRGFFSTIPFPGSC*SLIVAI
Trigger: AATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAA...CGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTVLKLV*PQLASQ
Trigger: CTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAAC...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAACGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACC +
Preference number: 4 (lower is better)
Translates to: SPSTVLERIFQHHSETWKRLQSV*QEILIT
Trigger: GGTGATAAGGATCTCTTGCCACACAGACTGCAGGCG...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TTCTCTGAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: FSEITILAELGSVPCAHCPLGCC*AKPSPR
Trigger: ACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGG...ACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAACCGGGCACCTCAGGCTaGCCATTCATCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FLLLHTFGQKGAILLARKPGTSG*PFIQIS
Trigger: GGAGATCTGGATGAATGGCCAGCCTGAGGTGCCCGG...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAAAGGAGCAATCCTCCTaGCTAGAAAAGGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: SPSTVLERIFQHHSETWKKEQSS*LEKGHV
Trigger: GACATGCCCCTTTTCTAGCCAGGAGGATTGCTCCTT...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTTTGTTTGGCCCCAGTTaGCTTCTCAGACTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLLFGPS*LLRLSV
Trigger: CACAGAGAGTCTGAGAAGCCAACTGGGGCCAAACAA...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS-3UTR TCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTACTCTCTGTGCCCAATaGTTGACTCATAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLTLCAQ*LTHSAS
Trigger: GGAAGCACTATGAGTCAATCATTGGGCACAGAGAGT...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS-3UTR CCA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTTTGGCTGAATCAACGTaGCCACTCTCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLLAEST*PLSFFS
Trigger: AGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAA...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGTTCTCAGACTCTTTGTaGTCATTCCTCCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSEFSDSL*SFLLCD
Trigger: GTCACAGAGGAGGAATGATCACAAAGAGTCTGAGAA...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR TCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGATGGATCATGCTATTTaGATCAGAATCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTMDHAI*IRITSI
Trigger: TATGGAGGTGATTCTGATTCAAATAGCATGATCCAT...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGTATTCCCAGCCCTCATaGTATAATGATCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTYSQPS*YNDLSF
Trigger: AAAGGAAAGATCATTATAGCATGAGGGCTGGGAATA...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp ATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCTGGAAATTGCATTTATTaGGTTAAGTTCACCCTGCTA +
Preference number: 4 (lower is better)
Translates to: ILAELGSVPCAHCPCRRSGNCIY*VKFTLL
Trigger: TAGCAGGGTGAACTTAACCCAATAAATGCAATTTCC...AGAGCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGAGAAATGAGCAAATGTaGTCAGCGATCTACCTACCT +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSERNEQM*SAIYLP
Trigger: AGGTAGGTAGATCGCTGACCACATTTGCTCATTTCT...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS-3UTR TCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAATCGCTCAGGATTTTCTaGGACAAAGGAATAGGCCGC +
Preference number: 4 (lower is better)
Translates to: FLLLHTFGQKGAILLARKSLRIF*DKGIGR
Trigger: GCGGCCTATTCCTTTGTCTCAGAAAATCCTGAGCGA...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCATGGATCATGCTATTTaGATCAGAATCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCMDHAI*IRITSI
Trigger: TATGGAGGTGATTCTGATTCAAATAGCATGATCCAT...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR TCA 90 bp CATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTTTCTATTCATTTTCATaGATGAGGTGGGAACTACAC +
Preference number: 4 (lower is better)
Translates to: HPQCWRGFFSTIPRPGKGFYSFS*MRWELH
Trigger: GTGTAGTTCCCACCTCATTCATGAAAATGAATAGAA...ACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp TTCTCTGAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSEITILAELGSVPCAHCVLKLV*PQLASQ
Trigger: CTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAAC...ACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CCA 90 bp GTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCGGAAATTGCATTTATTaGGTTAAGTTCACCCTGCTA +
Preference number: 4 (lower is better)
Translates to: VGEDFSAPFRDLERVMNCGNCIY*VKFTLL
Trigger: TAGCAGGGTGAACTTAACCCAATAAATGCAATTTCC...GCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCGAAAGGGTGATGAACTaGTTTGATTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: EITILAELGSVPCAHCPCERVMN*FDFSTS
Trigger: AGAAGTAGAAAAATCAAAGCAGTTCATCACCCTTTC...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TTTCTCCGATCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGTATTCCCAGCCCTCATaGTATAATGATCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLRSPSTVLERIFQHHSEYSQPS*YNDLSF
Trigger: AAAGGAAAGATCATTATAGCATGAGGGCTGGGAATA...CTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGATCGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGAAAGGGTGATGAACTaGTTTGATTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: SPSTVLERIFQHHSETWKERVMN*FDFSTS
Trigger: AGAAGTAGAAAAATCAAAGCAGTTCATCACCCTTTC...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR GCA 90 bp TTCTCTGAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCATGTCAACCTTTTTaGAGTTTCACAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: FSEITILAELGSVPCAHCPCQPF*SFTNRL
Trigger: TAACCTGTTTGTGAAACTGCAAAAAGGTTGACATGG...ACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTCAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR TCA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAAGGTGATGAACTGCTTTaGTTTTTCTACTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: FLLLHTFGQKGAILLARKGDELL*FFYFSI
Trigger: TATGGAGAAGTAGAAAAATCAAAGCAGTTCATCACC...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGAGCGCTGCCCGGGTCTaGGGCCGGCACCAGTACCTC +
Preference number: 5 (lower is better)
Translates to: PTVPADALLSRRPPVVSGSAARV*GRHQYL
Trigger: GAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGCT...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTAGCGCTGCCCGGGTCTaGGGCCGGCACCAGTACCTC +
Preference number: 5 (lower is better)
Translates to: CRRSPFQAASSGFRGPAASAARV*GRHQYL
Trigger: GAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGCT...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGGCTTCTCAGACTCTTaGCTGGGGCCCCGGCGCGCA +
Preference number: 5 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAGFSDS*LGPRRA
Trigger: TGCGCGCCGGGGCCCCAGCAAAGAGTCTGAGAAGCC...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393913.8
CDS-3UTR CAA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCTACCTACCTGCACTTaGCTGGGGCCCCGGCGCGCA +
Preference number: 5 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGLPTCT*LGPRRA
Trigger: TGCGCGCCGGGGCCCCAGCAAAGTGCAGGTAGGTAG...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS GCA 90 bp ACACGGTGTCCTCACTGCCATCCTCGCTGTCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGAACTTCTTCCCGGGACGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: TRCPHCHPRCRCCRC*SLCPAGTSSRDAAC
Trigger: GCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 90 bp AGCGGCGGTGTCTCCGCACGGAGAGATCGGACACGGTGTCCTCACTaGCATCCTCGCTGTCGCTGCTGTCGCTGCTGCTCTCTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SGGVSARRDRTRCPH*HPRCRCCRCCSLCP
Trigger: AGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGTCCGATCTCTCCGTGCGGAGACACCGCCGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
CDS-3UTR CAA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGGCTGGGTTCAGTTCCTaGTGCCCACTGTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VPADALLSRRPPVVSGVLAGFSS*CPLSLQ
Trigger: CTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGC...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CAA 90 bp CCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTGGGTTCAGTTCCTaGTGCCCACTGTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PCRRSPFQAASSGFRGPAAGFSS*CPLSLQ
Trigger: CTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGC...AGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS-3UTR CAA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCGCTGGGTTCAGTTCCTaGTGCCCACTGTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSAGFSS*CPLSLQ
Trigger: CTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGC...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410113.5
CDS GCA 90 bp CTGCCATCCTCGCTGTCGCTGCTGTCGCTGCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGACGCCGCCTGCAGTCTGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LPSSLSLLSLLLSLS*RNFFPGRRLQSVWQ
Trigger: TTGCCACACAGACTGCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 90 bp ACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATTCAGGCTCCTGGTCCCGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: TLSFPGGLQWFPGSC*SLIVAIQAPGPGHL
Trigger: GAGGTGCCCGGGACCAGGAGCCTGAATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS GCA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCGATTCAGGCTCCTGGTCCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: QTLSFPGGLQWFPGS*CSLIVAIQAPGPGH
Trigger: GTGCCCGGGACCAGGAGCCTGAATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLTSWRC*AESTWP
Trigger: TGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGT...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCTSWRC*AESTWP
Trigger: TGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGT...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp GCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: AHCPCRRSPFQAASSGFRTSWRC*AESTWP
Trigger: TGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGT...CCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp CTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCA +
Preference number: 5 (lower is better)
Translates to: LSLQTLSFPGGLQWFPGSTSWRC*AESTWP
Trigger: TGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGT...GGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS GCA 90 bp CGGAGAGATCGGACACGGTGTCCTCACTGCCATCCTCGCTGTCGCTaGTGTCGCTGCTGCTCTCTCTGTCCTGCAGGAACTTCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: RRDRTRCPHCHPRCR*CRCCSLCPAGTSSR
Trigger: CCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGTCCGATCTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CCA 90 bp CTGTCCTGCAGGAACTTCTTCCCGGGACGCCGCCTGCAGTCTGTGTaGCAAGAGATCCTTATCACCAGAGCAGCCAGGGTCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LSCRNFFPGRRLQSV*QEILITRAARVSTS
Trigger: GCTGGTGCTGACCCTGGCTGCTCTGGTGATAAGGATCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CCA 90 bp TGCCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGCTCCCTAATAGTAGCGATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: CPLSLQTLSFPGGLQ*FPGSCCSLIVAIQA
Trigger: AGCCTGAATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS GCA 90 bp CTGAGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LRGSLMGHPEGTSWR*LAESTWPLSFFSSG
Trigger: CCCAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5
CDS GCA 90 bp TGCTGCTCTCTCTGTCCTGCAGGAACTTCTTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGATCCTTATCACCAGAGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: CCSLCPAGTSSRDAA*SLCGKRSLSPEQPG
Trigger: CCCTGGCTGCTCTGGTGATAAGGATCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CCA 90 bp GGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GAASWDIQRGPPGGA*LNQRGHSPSSLLQA
Trigger: GGCTTGGAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432649.5
CDS-3UTR CAA 90 bp TGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCTTGTTTGGCCCCAGTaGGCTTCTCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: CRRSPFQAASSGFRGPAALVWPQ*ASQTLQ
Trigger: TTGGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAG...AGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410071.5
CDS TCA 90 bp CAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCTGGGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: QPHGTSRGDLLEVLG*INVATLLLLFWGEV
Trigger: CACCTCTCCCCAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5
CDS TCA 90 bp CAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCTTTGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: QPHGTSRGDLLEVLG*INVATLLLLFFAGA
Trigger: GGCCCCAGCAAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS GCA 90 bp CTGAGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LRGSLMGHPEGTSWR*LAESTWPLSFFSSP
Trigger: TGGAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432649.5
CDS CCA 90 bp GGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: GAASWDIQRGPPGGA*LNQRGHSPSSLHFW
Trigger: CCAGAAGTGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452003.1
CDS CCA 90 bp GGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAASWDIQRGPPGGA*LNQRGHSPSSLLCW
Trigger: CCAGCAAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS-3UTR CAA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VPADALLSRRPPVVSGVLGSKTC*APVGFS
Trigger: TGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACC...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCSSLMM*ASASRG
Trigger: ACCTCTACTGGCTGATGCCAACATCATCAGAGATGA...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp GTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGTCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: VPADALLSRRPPVVSGVLSSLMM*ASASRG
Trigger: ACCTCTACTGGCTGATGCCAACATCATCAGAGATGA...CAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp GCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCTCTCCATCCACAGTGTaGGAGAGGATTTTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ADALLSRRPPVVSGVLLLSPSTV*ERIFQH
Trigger: GTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA...GAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTCTCCATCCACAGTGTaGGAGAGGATTTTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SLQTLSFPGGLQWFPGSCSPSTV*ERIFQH
Trigger: GTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA...GCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS GCA 90 bp CTGAGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: LRGSLMGHPEGTSWR*LAESTWPLSFFSSL
Trigger: AAGTGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452003.1
CDS GCA 90 bp CTGAGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LRGSLMGHPEGTSWR*LAESTWPLSFFSSL
Trigger: CAAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS-3UTR CAA 90 bp CACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HCPCRRSPFQAASSGFRGGSKTC*APVGFS
Trigger: TGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACC...ACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
CDS-3UTR CAA 90 bp CTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCGCCATGTCAACCTTTTaGCAGTTTCACAAACAGGTT +
Preference number: 5 (lower is better)
Translates to: LQTLSFPGGLQWFPGSCCAMSTF*QFHKQV
Trigger: AACCTGTTTGTGAAACTGCAAAAAGGTTGACATGGC...GCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR CAA 90 bp CAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGCTCCTGGACGAGGTTGCCCTaGCAACACAAGATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: QTLSFPGGLQWFPGSCCSWTRLP*QHKILK
Trigger: TTTTAAAATCTTGTGTTGCAAGGGCAACCTCGTCCA...GGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CCCACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGTTAAAATGGACGAGGTaGCCCTTGCAACACAAGATT +
Preference number: 5 (lower is better)
Translates to: PTVPADALLSRRPPVVSGLKWTR*PLQHKI
Trigger: AATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAA...CCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS TCA 90 bp CAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCACTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: QPHGTSRGDLLEVLG*INVATLLLLFTSGT
Trigger: AGTTCCAGAAGTGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452003.1
CDS-3UTR CAA 90 bp ACTGTCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCTGGACGAGGTTGCCCTaGCAACACAAGATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: TVPADALLSRRPPVVSGVWTRLP*QHKILK
Trigger: TTTTAAAATCTTGTGTTGCAAGGGCAACCTCGTCCA...GACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTGATTCCCATCCTAACTTaGGCTTTAATCCTTACCTCT +
Preference number: 5 (lower is better)
Translates to: PADALLSRRPPVVSGVLLIPILT*ALILTS
Trigger: AGAGGTAAGGATTAAAGCCAAAGTTAGGATGGGAAT...CAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000393913.8
CDS GCA 90 bp AAGAGATCCTTATCACCAGAGCAGCCAGGGTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGTACAGAGCTGCTCGCTCAGGATTTT +
Preference number: 5 (lower is better)
Translates to: KRSLSPEQPGSAPAR*TRQKQSTELLAQDF
Trigger: AAAATCCTGAGCGAGCAGCTCTGTACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGACCCTGGCTGCTCTGGTGATAAGGATCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS-3UTR CAA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGCTGGGTTCAGTTCCTaGTGCCCACTGTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPSTVLERIFQHHSETWKAGFSS*CPLSLQ
Trigger: CTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGC...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp ATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCTCTTCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: ILAELGSVPCAHCPCRRSSSLMM*ASASRG
Trigger: ACCTCTACTGGCTGATGCCAACATCATCAGAGATGA...AGAGCGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp ATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACTTGTTTGGCCCCAGTaGGCTTCTCAGACTCTTTGC +
Preference number: 5 (lower is better)
Translates to: ITILAELGSVPCAHCPCRLVWPQ*ASQTLC
Trigger: GCAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAAG...TCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393913.8
CDS-3UTR CAA 90 bp GAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCTCTCCATCCACAGTGTaGGAGAGGATTTTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: EITILAELGSVPCAHCPCSPSTV*ERIFQH
Trigger: GTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA...GCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp ATCCCTGAGGTGCCAGTTAAAATGGACGAGGTTGCCCTTGCAACACAAGATTTTCTTGTTTGGCCCCAGTaGGCTTCTCAGACTCTTTGT +
Preference number: 5 (lower is better)
Translates to: IPEVPVKMDEVALATQDFLVWPQ*ASQTLC
Trigger: ACAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAAG...AAAATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAACTGGCACCTCAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR CAA 90 bp TCTCCATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAATCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: SPSTVLERIFQHHSETWKSSLMM*ASASRG
Trigger: ACCTCTACTGGCTGATGCCAACATCATCAGAGATGA...TTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGCATGGATCATGCTATTaGAATCAGAATCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTHGSCY*NQNHLH
Trigger: ATGGAGGTGATTCTGATTCAAATAGCATGATCCATG...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp CACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCCCTGCAGACGATTCCCATCCTAACTTaGGCTTTAATCCTTACCTCT +
Preference number: 5 (lower is better)
Translates to: HNISRAGFSSLCPLSLQTIPILT*ALILTS
Trigger: AGAGGTAAGGATTAAAGCCAAAGTTAGGATGGGAAT...CGTCTGCAGGGACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000393913.8
CDS-3UTR CAA 90 bp CATCCACAGTGTTGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTTTAAAATGGACGAGGTaGCCCTTGCAACACAAGATT +
Preference number: 5 (lower is better)
Translates to: HPQCWRGFFSTIPRPGKGLKWTR*PLQHKI
Trigger: AATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAA...ACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCAACACTGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTTGGACGAGGTTGCCCTaGCAACACAAGATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLWTRLP*QHKILK
Trigger: TTTTAAAATCTTGTGTTGCAAGGGCAACCTCGTCCA...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TGGAGAGGATTTTTCAGCACCATTCCGAGACCTGGAAAGGGTGATGAACTGCTTTTAAAATGGACGAGGTaGCCCTTGCAACACAAGATT +
Preference number: 5 (lower is better)
Translates to: WRGFFSTIPRPGKGDELLLKWTR*PLQHKI
Trigger: AATCTTGTGTTGCAAGGGCAACCTCGTCCATTTTAA...AAGCAGTTCATCACCCTTTCCAGGTCTCGGAATGGTGCTGAAAAATCCTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAACTTGTTTGGCCCCAGTaGGCTTCTCAGACTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FLLLHTFGQKGAILLARKLVWPQ*ASQTLC
Trigger: ACAGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAG...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410113.5
CDS TCA 90 bp ATGATGCTTCACCCAAAAGGAGACTTAACTTCTAGTCTCAAAGATTaGTTGCCAGCCAAGGAGGAAGAAGGGCATTCCAAAAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: MMLHPKGDLTSSLKD*LPAKEEEGHSKKSG
Trigger: TCCTGACTTTTTGGAATGCCCTTCTTCCTCCTTGGCTGGCAATCAATCTTTGAGACTAGAAGTTAAGTCTCCTTTTGGGTGAAGCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486489.1
CDS GCA 90 bp GCACTTTGTGATCATTCCTCCTCTGTGACCTTCTTTAACTGGCTTTaGTTGGTAACAGACACATCTGTTCGCATCACTAAAATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: ALCDHSSSVTFFNWL*LVTDTSVRITKMLQ
Trigger: CTGAAGCATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATCACAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486696.1
CDS CCA 90 bp CTACCTGCACTTTGTGATCATTCCTCCTCTGTGACCTTCTTTAACTaGCTTTGCTTGGTAACAGACACATCTGTTCGCATCACTAAAATG +
Preference number: 5 (lower is better)
Translates to: LPALCDHSSSVTFFN*LCLVTDTSVRITKM
Trigger: CATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATCACAAAGTGCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486696.1
CDS GCA 90 bp ACTCTTTGTGATCATTCCTCCTCTGTGACCTTCTTTAACTGGCTTTaGTTGGTAACAGACACATCTGTTCGCATCACTAAAATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: TLCDHSSSVTFFNWL*LVTDTSVRITKMLQ
Trigger: CTGAAGCATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATCACAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS CCA 90 bp TCTCAGACTCTTTGTGATCATTCCTCCTCTGTGACCTTCTTTAACTaGCTTTGCTTGGTAACAGACACATCTGTTCGCATCACTAAAATG +
Preference number: 5 (lower is better)
Translates to: SQTLCDHSSSVTFFN*LCLVTDTSVRITKM
Trigger: CATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATCACAAAGAGTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS-3UTR CAA 90 bp TTCTCTGAAATCACAATATTAGCAGAGCTGGGTTCAGTTCCTTGTGCCCACTGTCATGGATCATGCTATTaGAATCAGAATCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: FSEITILAELGSVPCAHCHGSCY*NQNHLH
Trigger: ATGGAGGTGATTCTGATTCAAATAGCATGATCCATG...ACAGTGGGCACAAGGAACTGAACCCAGCTCTGCTAATATTGTGATTTCAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410113.5
CDS-3UTR CAA 90 bp TTTCTACTTCTCCATACATTTGGCCAAAAAGGAGCAATCCTCCTGGCTAGAAAATTTAACTGGCTTTGCTaGGTAACAGACACATCTGTT +
Preference number: 5 (lower is better)
Translates to: FLLLHTFGQKGAILLARKFNWLC*VTDTSV
Trigger: AACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAA...TTTTCTAGCCAGGAGGATTGCTCCTTTTTGGCCAAATGTATGGAGAAGTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS CAA 90 bp GAGCTGATCACTGAGGGGCGGACACGACAAAGCGCTGCCCGGGTCTaGGGCCGGCACCAGTACCTCGGAAAGGAATCCCGGCGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: ELITEGRTRQSAARV*GRHQYLGKESRRRG
Trigger: GCCCCTCCGCCGGGATTCCTTTCCGAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGCTTTGTCGTGTCCGCCCCTCAGTGATCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393913.8
ENST00000410113.5
ENST00000485891.1
ENST00000486489.1
ENST00000490746.5
CDS CCA 72 bp CTGAGGGGCGGACACGACAAAGCGCTGCCCGGGTCTTaGGCCGGCACCAGTACCTCGGAAAGGAATCCCGGC +
Preference number: 6 (lower is better)
Translates to: LRGGHDKALPGS*AGTSTSERNPG
Trigger: GCCGGGATTCCTTTCCGAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGCTTTGTCGTGTCCGCCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393913.8
ENST00000410113.5
ENST00000485891.1
ENST00000486489.1
ENST00000490746.5
CDS CAA 72 bp ACTGAGGGGCGGACACGACAAAGCGCTGCCCGGGTCTaGGGCCGGCACCAGTACCTCGGAAAGGAATCCCGG +
Preference number: 6 (lower is better)
Translates to: TEGRTRQSAARV*GRHQYLGKESR
Trigger: CCGGGATTCCTTTCCGAGGTACTGGTGCCGGCCCAAGACCCGGGCAGCGCTTTGTCGTGTCCGCCCCTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393913.8
ENST00000410113.5
ENST00000485891.1
ENST00000486489.1
ENST00000490746.5
CDS GCA 72 bp TCGCTGTCGCTGCTGTCGCTGCTGCTCTCTCTGTCCTaGAGGAACTTCTTCCCGGGACGCCGCCTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SLSLLSLLLSLS*RNFFPGRRLQS
Trigger: AGACTGCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 72 bp GTCTCCGCACGGAGAGATCGGACACGGTGTCCTCACTaGCATCCTCGCTGTCGCTGCTGTCGCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: VSARRDRTRCPH*HPRCRCCRCCS
Trigger: AGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGTCCGATCTCTCCGTGCGGAGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 72 bp GCCGCTAGGATGTTGCTGAGCAAAGCCATCTCCACGTaGTCTGGGCTGTGGCTGAGGGGCAGCCTCATGGGA +
Preference number: 6 (lower is better)
Translates to: AARMLLSKAIST*SGLWLRGSLMG
Trigger: TCCCATGAGGCTGCCCCTCAGCCACAGCCCAGAGCACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
ENST00000485891.1
ENST00000486696.1
ENST00000490746.5
CDS GCA 72 bp CCTCACTGCCATCCTCGCTGTCGCTGCTGTCGCTGCTaGTCTCTCTGTCCTGCAGGAACTTCTTCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PHCHPRCRCCRC*SLCPAGTSSRD
Trigger: GTCCCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 72 bp CGGACACGGTGTCCTCACTGCCATCCTCGCTGTCGCTaGTGTCGCTGCTGCTCTCTCTGTCCTGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: RTRCPHCHPRCR*CRCCSLCPAGT
Trigger: AGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACACCGTGTCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CCA 72 bp TCCCTGCAGACGCTCTCCTTTCCAGGCGGCCTCCAGTaGTTTCCGGGGTCCTGCTGCTCCCTAATAGTAGCG +
Preference number: 6 (lower is better)
Translates to: SLQTLSFPGGLQ*FPGSCCSLIVA
Trigger: CGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGAGAGCGTCTGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS GCA 72 bp TGTCCTCACTGCCATCCTCGCTGTCGCTGCTGTCGCTaGTGCTCTCTCTGTCCTGCAGGAACTTCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: CPHCHPRCRCCR*CSLCPAGTSSR
Trigger: CCGGGAAGAAGTTCCTGCAGGACAGAGAGAGCAGCAGCGACAGCAGCGACAGCGAGGATGGCAGTGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS GCA 72 bp TTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTGCTaGTCCCTAATAGTAGCGATTCAGGCTCCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: FPGGLQWFPGSC*SLIVAIQAPGP
Trigger: GGGACCAGGAGCCTGAATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS GCA 72 bp TCCTTTCCAGGCGGCCTCCAGTGGTTTCCGGGGTCCTaGTGCTCCCTAATAGTAGCGATTCAGGCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SFPGGLQWFPGS*CSLIVAIQAPG
Trigger: ACCAGGAGCCTGAATCGCTACTATTAGGGAGCAGCAGGACCCCGGAAACCACTGGAGGCCGCCTGGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS CCA 72 bp GAGGGGACCTCCTGGAGGTGCTTGGCTGAATCAACGTaGCCACTCTCCTTCTTCTCTTCTGGGGAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: EGTSWRCLAEST*PLSFFSSGERW
Trigger: CCACCTCTCCCCAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5
CDS CCA 72 bp GTCCTGCTGCTCCCTAATAGTAGCGATTCAGGCTCCTaGTCCCGGGCACCTCAGGCTGGCCATTCATCCAGA +
Preference number: 6 (lower is better)
Translates to: VLLLPNSSDSGS*SRAPQAGHSSR
Trigger: TCTGGATGAATGGCCAGCCTGAGGTGCCCGGGACCAGGAGCCTGAATCGCTACTATTAGGGAGCAGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
CDS CCA 72 bp GAGGGGACCTCCTGGAGGTGCTTGGCTGAATCAACGTaGCCACTCTCCTTCTTCTCTTCTTTGCTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: EGTSWRCLAEST*PLSFFSSLLGP
Trigger: GGGCCCCAGCAAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS CAA 90 bp AGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: RGSLMGHPEGTSWRC*AESTWPLSFFSSPS
Trigger: GCTTGGAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432649.5
CDS CAA 90 bp AGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCACTTCTG +
Preference number: 6 (lower is better)
Translates to: RGSLMGHPEGTSWRC*AESTWPLSFFSSLL
Trigger: CAGAAGTGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452003.1
CDS CAA 90 bp AGGGGCAGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: RGSLMGHPEGTSWRC*AESTWPLSFFSSLL
Trigger: CAGCAAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS TCA 72 bp GGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: GTSRGDLLEVLG*INVATLLLLFW
Trigger: CCAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5
CDS GCA 72 bp AGCCTCATGGGACATCCAGAGGGGACCTCCTGGAGGTaGTTGGCTGAATCAACGTGGCCACTCTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SLMGHPEGTSWR*LAESTWPLSFF
Trigger: GAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
ENST00000485891.1
ENST00000486696.1
ENST00000490746.5
CDS GCA 72 bp CTCTGTCCTGCAGGAACTTCTTCCCGGGACGCCGCCTaGAGTCTGTGTGGCAAGAGATCCTTATCACCAGAG +
Preference number: 6 (lower is better)
Translates to: LCPAGTSSRDAA*SLCGKRSLSPE
Trigger: CTCTGGTGATAAGGATCTCTTGCCACACAGACTGCAGGCGGCGTCCCGGGAAGAAGTTCCTGCAGGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS TCA 72 bp GGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCACT +
Preference number: 6 (lower is better)
Translates to: GTSRGDLLEVLG*INVATLLLLFT
Trigger: AGTGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452003.1
CDS TCA 72 bp CACCTGAGACAAAGGAATAGGCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGTGCTCTGGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: HLRQRNRPLGCC*AKPSPRALGCG
Trigger: GCCACAGCCCAGAGCACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGGCCTATTCCTTTGTCTCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485891.1
ENST00000490746.5
CDS GCA 72 bp TTATCACCAGAGCAGCCAGGGTCAGCACCAGCCCGATaGACACGCCAGAAACAAAGTACAGAGCTGCTCGCT +
Preference number: 6 (lower is better)
Translates to: LSPEQPGSAPAR*TRQKQSTELLA
Trigger: AGCGAGCAGCTCTGTACTTTGTTTCTGGCGTGTGCATCGGGCTGGTGCTGACCCTGGCTGCTCTGGTGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410010.1
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CAA 72 bp CTCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTaGGCTGAATCAACGTGGCCACTCTCCTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LMGHPEGTSWRC*AESTWPLSFFS
Trigger: AGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
ENST00000485891.1
ENST00000486696.1
ENST00000490746.5
CDS TCA 72 bp GGGACATCCAGAGGGGACCTCCTGGAGGTGCTTGGCTaGATCAACGTGGCCACTCTCCTTCTTCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: GTSRGDLLEVLG*INVATLLLLFF
Trigger: AAAGAAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485891.1
CDS CCA 72 bp TCATGGGACATCCAGAGGGGACCTCCTGGAGGTGCTTaGCTGAATCAACGTGGCCACTCTCCTTCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SWDIQRGPPGGA*LNQRGHSPSSL
Trigger: AAGAGAAGAAGGAGAGTGGCCACGTTGATTCAGCCAAGCACCTCCAGGAGGTCCCCTCTGGATGTCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
ENST00000485891.1
ENST00000486696.1
ENST00000490746.5
CDS TCA 72 bp TTTCTGAGACAAAGGAATAGGCCGCTAGGATGTTGCTaGGCAAAGCCATCTCCACGTGCTCTGGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: FLRQRNRPLGCC*AKPSPRALGCG
Trigger: GCCACAGCCCAGAGCACGTGGAGATGGCTTTGCTCAGCAACATCCTAGCGGCCTATTCCTTTGTCTCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000432649.5
ENST00000452003.1
CDS CAA 72 bp ATGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCAGACTCTCCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: MLASASRGSKTC*APVGFSDSPSP
Trigger: GGGGCTTGGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410071.5
CDS CCA 72 bp TGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAGACTCTCTGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: CWHQPVEVLKLV*PQLASQTLCAQ
Trigger: TTGGGCACAGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410113.5
ENST00000486696.1
CDS CAA 72 bp ATGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCAGACTCTTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: MLASASRGSKTC*APVGFSDSLLG
Trigger: CCCCAGCAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393913.8
ENST00000490746.5
CDS CAA 72 bp ATGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCAGACTCTCTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: MLASASRGSKTC*APVGFSDSLCP
Trigger: TGGGCACAGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410113.5
ENST00000486696.1
CDS CAA 90 bp TCTCTGATGATGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTaGGCCCCAGTTGGCTTCTCAGACTCTCTGTGCCCAATGATTGAC +
Preference number: 6 (lower is better)
Translates to: SLMMLASASRGSKTC*APVGFSDSLCPMID
Trigger: GTCAATCATTGGGCACAGAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACATCATCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000410113.5
ENST00000486696.1
CDS TCA 72 bp GGCAGGGCAGGGAGCAACAAAATGGTCTGTAGGAACTaGAGAATGATGCTTCACCCAAAAGGAGACTTAACT +
Preference number: 6 (lower is better)
Translates to: GRAGSNKMVCRN*RMMLHPKGDLT
Trigger: AGTTAAGTCTCCTTTTGGGTGAAGCATCATTCTTCAGTTCCTACAGACCATTTTGTTGCTCCCTGCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486489.1
CDS CAA 72 bp CAGCCAGTAGAGGTTCTAAAACTTGTTTGGCCCCAGTaGGCTTCTCAGACTCTTTGTGATCATTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: QPVEVLKLVWPQ*ASQTLCDHSSS
Trigger: AGAGGAGGAATGATCACAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS GCA 72 bp TCTTACAAAATAAAATCAGGTCTCCATAGCATGGGCTaGAACGTCCTTCAGGGTCAGCCGCTACATATCTCT +
Preference number: 6 (lower is better)
Translates to: SYKIKSGLHSMG*NVLQGQPLHIS
Trigger: AGAGATATGTAGCGGCTGACCCTGAAGGACGTTGCAGCCCATGCTATGGAGACCTGATTTTATTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000486696.1
CDS CCA 72 bp TGTTGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTTaGCCCCAGTTGGCTTCTCAGACTCTTTGTGATCAT +
Preference number: 6 (lower is better)
Translates to: CWHQPVEVLKLV*PQLASQTLCDH
Trigger: ATGATCACAAAGAGTCTGAGAAGCCAACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS CAA 90 bp CTTTGTGATCATTCCTCCTCTGTGACCTTCTTTAACTGGCTTTGCTaGGTAACAGACACATCTGTTCGCATCACTAAAATGCTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: LCDHSSSVTFFNWLC*VTDTSVRITKMLQG
Trigger: CCCCTGAAGCATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000486696.1
CDS CAA 90 bp AGGAGCAGAGAAGTTTCTGGTAAGAACAGTTCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTTGGCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: RSREVSGKNSSSLMM*ASASRGSKTCLAPV
Trigger: AACTGGGGCCAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACATCATCAGAGATGAACTGTTCTTACCAGAAACTTCTCTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5
CDS GCA 72 bp ATATCTCTCCCAACCATTCAGTACCAACCCATCTTCTaGTTCAGCCATGTCAACCTTTTTGCAGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: ISLPTIQYQPIF*FSHVNLFAVSQ
Trigger: TTGTGAAACTGCAAAAAGGTTGACATGGCTGAAGCAGAAGATGGGTTGGTACTGAATGGTTGGGAGAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233712.5
CDS GCA 72 bp GATCATTCCTCCTCTGTGACCTTCTTTAACTGGCTTTaGTTGGTAACAGACACATCTGTTCGCATCACTAAA +
Preference number: 6 (lower is better)
Translates to: DHSSSVTFFNWL*LVTDTSVRITK
Trigger: TTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000486696.1
CDS CAA 72 bp CATTCCTCCTCTGTGACCTTCTTTAACTGGCTTTGCTaGGTAACAGACACATCTGTTCGCATCACTAAAATG +
Preference number: 6 (lower is better)
Translates to: HSSSVTFFNWLC*VTDTSVRITKM
Trigger: CATTTTAGTGATGCGAACAGATGTGTCTGTTACCAAGCAAAGCCAGTTAAAGAAGGTCACAGAGGAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233712.5
ENST00000486696.1
CDS CAA 72 bp GAAGTTTCTGGTAAGAACAGTTCATCTCTGATGATGTaGGCATCAGCCAGTAGAGGTTCTAAAACTTGTTTG +
Preference number: 6 (lower is better)
Translates to: EVSGKNSSSLMM*ASASRGSKTCL
Trigger: CAAACAAGTTTTAGAACCTCTACTGGCTGATGCCAACATCATCAGAGATGAACTGTTCTTACCAGAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233712.5
ENST00000393913.8
ENST00000410071.5
ENST00000410113.5
ENST00000486696.1
ENST00000490746.5