Pregenerated sensors for ERVFRD-3 (Homo sapiens)

Ensembl gene IDs: ENSG00000264801

Ensembl transcript IDs: ENST00000578561.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGGAGGACTACAACTGCTAAAGTGTTAATTTGCTCTGGCCATGGTTaGGGTTTTAGCCATGATATTAAACTTGCTGGCTATTTCCTTTCA	+
Preference number: 5 (lower is better) Translates to: WRTTTAKVLICSGHG*GFSHDIKLAGYFLS Trigger: TGAAAGGAAATAGCCAGCAAGTTTAATATCATGGCTAAAACCTCAACCATGGCCAGAGCAAATTAACACTTTAGCAGTTGTAGTCCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578561.1
CDS TCA 90 bp	GCTAAACAAATTCCTCCCTGTGCTGCCATTAACATATCTAGTCCTTaGCAGTTTTGGAGGACTACAACTGCTAAAGTGTTAATTTGCTCT	+
Preference number: 5 (lower is better) Translates to: AKQIPPCAAINISSP*QFWRTTTAKVLICS Trigger: AGAGCAAATTAACACTTTAGCAGTTGTAGTCCTCCAAAACTGTCAAGGACTAGATATGTTAATGGCAGCACAGGGAGGAATTTGTTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578561.1
CDS CCA 72 bp	CACCCTGGGCAAGATAGAATTCCCATGGATTGGTGCTaGAAGAGAGAGATTGCCAGGGAGTATAAAGATGTC	+
Preference number: 6 (lower is better) Translates to: HPGQDRIPMDWC*KREIAREYKDV Trigger: GACATCTTTATACTCCCTGGCAATCTCTCTCTTCCAGCACCAATCCATGGGAATTCTATCTTGCCCAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578561.1

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