Pregenerated sensors for ERV3-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000213462Ensembl transcript IDs: ENST00000394323.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTTTTTCTCATCCCTGCTCCTGGAGCCCACTCCTTCGGAGCCCCTaGCTGGCCTTGCAGATAATTATCATAGCTCCAGCAGGACTTTGG | + |
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Preference number: 1 (lower is better) Translates to: CFSHPCSWSPLLRSP*LALQIIIIAPAGLW Trigger: CCAAAGTCCTGCTGGAGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCTCCGAAGGAGTGGGCTCCAGGAGCAGGGATGAGAAAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR CCA 90 bp | CCCTGCCTGGCCTTGCAGATAATTATCATAGCTCCAGCAGGACTTTaGAGTGAGTCAGACTGGTCAGGAAAGGACTTGTTTTCCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: PCLALQIIIIAPAGL*SESDWSGKDLFSLY Trigger: GTAAAGGGAAAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTATCTGCAAGGCCAGGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 90 bp | CCTGGCCTTGCAGATAATTATCATAGCTCCAGCAGGACTTTGGAGTaGGTCAGACTGGTCAGGAAAGGACTTGTTTTCCCTTTACTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PGLADNYHSSSRTLE*VRLVRKGLVFPLLV Trigger: AACAAGTAAAGGGAAAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTATCTGCAAGGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 90 bp | GAAAGCAGTCTTACAGAAGCAGAACAAAGGCAGTTAATCATACCGTaGCAGGTTTTACAACAGGATTTGCAACATGAGCCTACCTTACTT | + |
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Preference number: 1 (lower is better) Translates to: ESSLTEAEQRQLIIP*QVLQQDLQHEPTLL Trigger: AAGTAAGGTAGGCTCATGTTGCAAATCCTGTTGTAAAACCTGTCACGGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAGACTGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 90 bp | CAACAGGATTTGCAACATGAGCCTACCTTACTTAAACATGTCTTGTaGCCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAATC | + |
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Preference number: 1 (lower is better) Translates to: QQDLQHEPTLLKHVL*PCHATERKTRTYKI Trigger: GATTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAAGTAAGGTAGGCTCATGTTGCAAATCCTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCCTTGTGACCTTGCCATaGTACAGAAAGAAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: PLAQRINIQRLSPEQRQGLVTLP*YRKKNK Trigger: CTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAG...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCGCAAAACCTGCGAGGTaGGAAAGCAGTCTTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: QRLSPEQRQGLTFIHASGAKPAR*ESSLTE Trigger: TTCTGTAAGACTGCTTTCTCACCTCGCAGGTTTTGC...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCTTTTGGCGCAAAACCTaGGAGGTGAGAAAGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QRLSPEQRQGLTFIHASGFWRKT*EVRKQS Trigger: AGACTGCTTTCTCACCTCGCAGGTTTTGCGCCAAAA...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR CAA 90 bp | GTAGTCCGTCTGTCCACAAGAGCCTCTATGGCTGTTTGGATATTTTaGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCC | + |
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Preference number: 2 (lower is better) Translates to: VVRLSTRASMAVWIF*TMRGKRQGSIRQTP Trigger: GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCAAACAGCCATAGAGGCTCTTGTGGACAGACGGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCAGTTAATCATACCGTaGCAGGTTTTACAACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: QRLSPEQRQGLTFIHASGQLIIP*QVLQQD Trigger: ATCCTGTTGTAAAACCTGTCACGGTATGATTAACTG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTGCTCCTGGAGCCCAGCCTCTATGGCTGTTTaGATATTTTTGACAATGAGG | + |
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Preference number: 2 (lower is better) Translates to: TGKLIRRTCFSHPCSWSPASMAV*IFLTMR Trigger: CCTCATTGTCAAAAATATCCAAACAGCCATAGAGGC...TGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATAAAATCCTCCAAGGGATaGGAACCAACCTCTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SRTKNNVMGREFQTGKLIKSSKG*EPTSEK Trigger: CTTTTCAGAGGTTGGTTCTCATCCCTTGGAGGATTT...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATATGGAGTGAGTCAGACTaGTCAGGAAAGGACTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SRTKNNVMGREFQTGKLIWSESD*SGKDLF Trigger: AAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCA...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR GCA 72 bp | CATCCCTGCTCCTGGAGCCCACTCCTTCGGAGCCCCTaGCTGGCCTTGCAGATAATTATCATAGCTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HPCSWSPLLRSP*LALQIIIIAPA Trigger: TGCTGGAGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCTCCGAAGGAGTGGGCTCCAGGAGCAGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR GCA 72 bp | GGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTaGTCCTGGAGCCCACTCCTTCGGAGCCCCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GKLIRRTCFSHP*SWSPLLRSPCL Trigger: CAGGCAGGGGCTCCGAAGGAGTGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR CCA 72 bp | GTAGTCCGTCTGTCCACAAGAGCCTCTATGGCTGTTTaGATATTTTTGACAATGAGGGGTAAGAGACAAGGG | + |
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Preference number: 3 (lower is better) Translates to: VVRLSTRASMAV*IFLTMRGKRQG Trigger: CCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCAAACAGCCATAGAGGCTCTTGTGGACAGACGGACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 72 bp | GCAGATAATTATCATAGCTCCAGCAGGACTTTGGAGTaGGTCAGACTGGTCAGGAAAGGACTTGTTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: ADNYHSSSRTLE*VRLVRKGLVFP Trigger: AGGGAAAACAAGTCCTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCAGCCTCTATGGCTGTTaGGATATTTTTGACAATGAG | + |
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Preference number: 3 (lower is better) Translates to: QRLSPEQRQGLTFIHASGSLYGC*DIFDNE Trigger: CTCATTGTCAAAAATATCCAAACAGCCATAGAGGCT...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAGACAGGGCTTGACTTTTATACATGCATCAGGCAGGGGCAAGTCGGGTTTTTGGTCAGGAAAGGACTaGTTTTCCCTTTACTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QRQGLTFIHASGRGKSGFWSGKD*FSLYLF Trigger: AAACAAGTAAAGGGAAAACAAGTCCTTTCCTGACCA...AAAACCCGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 72 bp | CTTACAGAAGCAGAACAAAGGCAGTTAATCATACCGTaGCAGGTTTTACAACAGGATTTGCAACATGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LTEAEQRQLIIP*QVLQQDLQHEP Trigger: AGGCTCATGTTGCAAATCCTGTTGTAAAACCTGTCACGGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAGCCCCTGCCTGGCCTaGCAGATAATTATCATAGCT | + |
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Preference number: 3 (lower is better) Translates to: LNMSCDLAMLQKEKQELTSPCLA*QIIIIA Trigger: AGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCT...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR TCA 72 bp | TTGCAACATGAGCCTACCTTACTTAAACATGTCTTGTaGCCTTGCCATGCTACAGAAAGAAAAACAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: LQHEPTLLKHVL*PCHATERKTRT Trigger: AGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAAGTAAGGTAGGCTCATGTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAGCTGTTTGGATATTTTaGACAATGAGGGGTAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LNMSCDLAMLQKEKQELTAVWIF*TMRGKR Trigger: TCTCTTACCCCTCATTGTCAAAAATATCCAAACAGC...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCCCAAAGGCTGAGCCCTaGACAAAGACAGGGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: PLAQRINIQRLSPEQRQGPKAEP*TKTGLD Trigger: GTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTGG...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCCCACTTGTCCTGGGCTaGTGGTTTCAGCTGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: PLAQRINIQRLSPEQRQGPLVLG*WFQLTG Trigger: TCCAGTCAGCTGAAACCAGCAGCCCAGGACAAGTGG...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR CAA 72 bp | TCCTGGAGCCCACTCCTTCGGAGCCCCTGCCTGGCCTaGCAGATAATTATCATAGCTCCAGCAGGACTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SWSPLLRSPCLA*QIIIIAPAGLW Trigger: CCAAAGTCCTGCTGGAGCTATGATAATTATCTGCAAGGCCAGGCAGGGGCTCCGAAGGAGTGGGCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCTGCCTGCCAGGTATTTaGAGCTTCAAGTTGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: PLAQRINIQRLSPEQRQGCLPGI*SFKLVP Trigger: TGGTACCAACTTGAAGCTCCAAATACCTGGCAGGCA...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCATGAGAACCAACCTCTaGAAAGGGAATCTGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: PLAQRINIQRLSPEQRQGMRTNL*KGNLET Trigger: AGTCTCCAGATTCCCTTTTCAGAGGTTGGTTCTCAT...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | CAAAGACAGGGCTTGACTTTTATACATGCATCAGGCAGGGGCAAGTCGGGTTTTGTAGAGGCCAGAGGGTaGCTGCCAGGTATTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QRQGLTFIHASGRGKSGFVEARG*LPGIWS Trigger: GCTCCAAATACCTGGCAGGCACCCTCTGGCCTCTAC...AAAACCCGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | TGCGAGGTGAGAAAGCAGTCTTACAGAAGCAGAACAAAGGCAGTTAATCATACCGGTCAGCTTCCGGAGTaGCCAGAGCAGGGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: CEVRKQSYRSRTKAVNHTGQLPE*PEQGCC Trigger: ACAACAGCCCTGCTCTGGTCACTCCGGAAGCTGACC...GGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAGACTGCTTTCTCACCTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | ACAGGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTGCTCCTGGAGCCCAGCTGCTGGTTTCAGCTaGCTGGATGGATGGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: TGKLIRRTCFSHPCSWSPAAGFS*LDGWIQ Trigger: TTGGATCCATCCATCCAGTCAGCTGAAACCAGCAGC...TGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| 3UTR CAA 72 bp | AACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCTaGACTTTTATACATGCATCAGGCAGGGGCAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: NIQRLSPEQRQG*TFIHASGRGKS Trigger: CGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | ACAGGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTGCTCCTGGAGCCCACAACGTGCAGGCTGCTaGCTATGTTTTCAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TGKLIRRTCFSHPCSWSPQRAGC*LCFQPV Trigger: AACTGGCTGAAAACATAGCCAGCAGCCTGCACGTTG...TGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCCTTGTCCTGGGCTGCTaGTTTCAGCTGACTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPLVLGC*FQLTGW Trigger: CCATCCAGTCAGCTGAAACCAGCAGCCCAGGACAAG...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | ACAGGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTGCTCCTGGAGCCCACCAAGGCACAATTCCTaGAACATTTCTAGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TGKLIRRTCFSHPCSWSPPRHNS*NISRLP Trigger: TGGAAGCCTAGAAATGTTGCAGGAATTGTGCCTTGG...TGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | TGCGAGGTGAGAAAGCAGTCTTACAGAAGCAGAACAAAGGCAGTTAATCATACCTGGCAGTTGTCGATATaGTTGTGGCCCACAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: CEVRKQSYRSRTKAVNHTWQLSI*LWPTDP Trigger: TGGATCTGTGGGCCACAAGCATATCGACAACTGCCA...GGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAGACTGCTTTCTCACCTCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCGCTTCCCATGGCCATTaGTCTCCCATGTTCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPASHGH*SPMFIP Trigger: GGGAATGAACATGGGAGACCAATGGCCATGGGAAGC...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCTTAAACATGTCTTGTaGCCTTGCCATGCTACAGAA | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGLKHVL*PCHATE Trigger: TTCTGTAGCATGGCAAGGTCACAAGACATGTTTAAG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCGGAAATACCTTGGTTTaGTTTAGAAGATCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGGNTLV*FRRSPS Trigger: GGAAGGGGATCTTCTAAACCAAACCAAGGTATTTCC...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCAGAGGGAAATACCTTaGTTTGGTTTAGAAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGQREIP*FGLEDP Trigger: GGGATCTTCTAAACCAAACCAAGGTATTTCCCTCTG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCATTTCTCATTTTTGTaGCTTGCTGGGCAAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGHFSFL*LAGQAD Trigger: ATCTGCTTGCCCAGCAAGCCACAAAAATGAGAAATG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCTTAACATCCAAAGGCTaGGCCCTGAACAAAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPLTSKG*ALNKDR Trigger: CCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAA...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCCTGTTGTCATCTCACTaGCACCTTGGTTCCATCGTA | + |
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Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPLLSSH*HLGSIV Trigger: TACGATGGAACCAAGGTGCCAGTGAGATGACAACAG...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCGTTCTCCTTTTAACATaGATAAGGGGAGTAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGVLLLT*IRGVAR Trigger: TCTTGCTACTCCCCTTATCCATGTTAAAAGGAGAAC...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCCATCTTCTGCCCAGGTaGCTGGGCCATAATATTGAA | + |
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Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPHLLPR*LGHNIE Trigger: TTCAATATTATGGCCCAGCCACCTGGGCAGAAGATG...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAACCAGATGCTCTGACTTaGTGGTGCAGGTTCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKPDALT*WCRFEG Trigger: TCCCTCGAACCTGCACCATCAAGTCAGAGCATCTGG...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCAGAATTATTGCTTTTaGCCCTCCATAAAGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QRLSPEQRQGLTFIHASGQNYCF*PSIKSF Trigger: GAAAGACTTTATGGAGGGGCAAAAGCAATAATTCTG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAATATGGCTTGTTCATACCCAGCATaGACAGAAAAGGCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTMRGKRQGSIRQTPNMACSYPA*TEKAFS Trigger: GGAAAAAGCCTTTTCTGTCCATGCTGGGTATGAACA...AGCCATATTGGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | TTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAATATGGCTCAGTTAATCATACCGTaGCAGGTTTTACAACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGKRQGSIRQTPNMAQLIIP*QVLQQD Trigger: ATCCTGTTGTAAAACCTGTCACGGTATGATTAACTG...AGCCATATTGGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | ATAATTATCATAGCTCCAGCAGGACTTTGGAGTGAGTCAGACTGGTCAGGAAAGTTTTTAAGAACCAGATaGTCTGACTTGATGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIIIAPAGLWSESDWSGKFLRTR*SDLMVQ Trigger: CTGCACCATCAAGTCAGAGCATCTGGTTCTTAAAAA...CTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAAAAGCAACGTGCAGGCTaGTGGCTATGTTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKKQRAG*WLCFQP Trigger: TGGCTGAAAACATAGCCAGCAGCCTGCACGTTGCTT...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATACTGGTTTCAGCTGACTaGATGGATGGATCCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLILVSAD*MDGSKA Trigger: TGCCTTGGATCCATCCATCCAGTCAGCTGAAACCAG...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGCGAGGTGAGAAAGCAGTCTTACAGAAGCAGAACAAAGGCAGTTAATCATACCCCCATGGATACTATCTaGCAAACATCAAAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: CEVRKQSYRSRTKAVNHTPMDTI*QTSKYK Trigger: CTTATACTTTGATGTTTGCCAGATAGTATCCATGGG...GGTATGATTAACTGCCTTTGTTCTGCTTCTGTAAGACTGCTTTCTCACCTCGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAGTGTGAAATTATCTTaGGGCATTAGTTCCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPSVKLS*GISSLA Trigger: AGCAAGGGAACTAATGCCCCAAGATAATTTCACACT...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATATCCTTTGACCCGACATaGATTTCAAACCAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLISFDPT*ISNQVP Trigger: TGGGACCTGGTTTGAAATTCATGTCGGGTCAAAGGA...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATAGCAAAACCTGCGAGGTaGGAAAGCAGTCTTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLIAKPAR*ESSLTE Trigger: TTCTGTAAGACTGCTTTCTCACCTCGCAGGTTTTGC...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | TTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAATATGGCTATTTCTAGTACTGCCTaGAATCTTATAATGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGKRQGSIRQTPNMAISSTA*NLIMRL Trigger: TAACCGCATTATAAGATTGCAGGCAGTACTAGAAAT...AGCCATATTGGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAAATTTTTGTGGCTTGCTaGGCAAGCAGATTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKIFVAC*ASRFKA Trigger: GGCCTTGAATCTGCTTGCCCAGCAAGCCACAAAAAT...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAATCCTCCAAGGGATaGGAACCAACCTCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNMSCDLAMLQKEKQELTKSSKG*EPTSEK Trigger: CTTTTCAGAGGTTGGTTCTCATCCCTTGGAGGATTT...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATACTCATTTTTGTGGCTTaGTGGGCAAGCAGATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLILIFVA*WASRFK Trigger: CTTGAATCTGCTTGCCCAGCAAGCCACAAAAATGAG...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR TCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAATGGGCTTGGGTGTGGTaGTTCAGAATTATTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKWAWVW*FRIIAF Trigger: AAAAGCAATAATTCTGAATCACCACACCCAAGCCCA...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATACAGATTCAAGGCCCCTaGAGTTTCATTGGTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLIQIQGP*SFIGND Trigger: ATCATTACCAATGAAACTGCAGGGGCCTTGAATCTG...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACATCTGAAAAGGGAATCTaGAGACTATCCTTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNMSCDLAMLQKEKQELTSEKGI*RLSFPS Trigger: ACTTGGAAAGGATAGTCTCCAGATTCCCTTTTCAGA...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAAGCCTCTATGGCTGTTTaGATATTTTTGACAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKASMAV*IFLTMR Trigger: CCTCATTGTCAAAAATATCCAAACAGCCATAGAGGC...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR GCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATAGTGATTCAGAATTATTaGTTTTGCCCCTCCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLIVIQNY*FCPSIK Trigger: CTTTATGGAGGGGCAAAAGCAATAATTCTGAATCAC...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | AGCAGAACAAAGAATAATGTTATGGGGAGAGAATTTCAAACAGGGAAACTGATAAGTTGGTACCAAGAATaGTTTAAAGATGGGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKNNVMGREFQTGKLISWYQE*FKDGKR Trigger: TCGTTTCCCATCTTTAAACCATTCTTGGTACCAACT...TATCAGTTTCCCTGTTTGAAATTCTCTCCCCATAACATTATTCTTTGTTCTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CCA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAATTTGGAGCTTCAAGTTaGTACCAAGAATGGTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NMSCDLAMLQKEKQELTKFGASS*YQEWFK Trigger: TTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAA...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | CCACTGGCCCAGCGGATTAACATCCAAAGGCTGAGCCCTGAACAAAGACAGGGCTGCAGTCCCAGCAAGTaGTTACTGGGGAATCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLAQRINIQRLSPEQRQGCSPSK*LLGNRW Trigger: CCACCGATTCCCCAGTAACAACTTGCTGGGACTGCA...GCCCTGTCTTTGTTCAGGGCTCAGCCTTTGGATGTTAATCCGCTGGGCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 90 bp | GATGGTGCAGGTTCGAGGGAAGAGGCGGTTAGTGTGAAATTATCTTaGGGCATTAGTTCCCTTGCTTCCCATGGCCATTGGTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: DGAGSREEAVSVKLS*GISSLASHGHWSPM Trigger: CATGGGAGACCAATGGCCATGGGAAGCAAGGGAACTAATGCCCCAAGATAATTTCACACTAACCGCCTCTTCCCTCGAACCTGCACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 90 bp | TGCTCTGACTTGATGGTGCAGGTTCGAGGGAAGAGGCGGTTAGTGTaGAATTATCTTGGGGCATTAGTTCCCTTGCTTCCCATGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CSDLMVQVRGKRRLV*NYLGALVPLLPMAI Trigger: AATGGCCATGGGAAGCAAGGGAACTAATGCCCCAAGATAATTTCACACTAACCGCCTCTTCCCTCGAACCTGCACCATCAAGTCAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | ACAGGGAAACTGATAAGGAGAACTTGTTTTTCTCATCCCTGCTCCTGGAGCCCATGCTTCCCATGGCCATaGGTCTCCCATGTTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGKLIRRTCFSHPCSWSPCFPWP*VSHVHS Trigger: GGAATGAACATGGGAGACCAATGGCCATGGGAAGCA...TGGGCTCCAGGAGCAGGGATGAGAAAAACAAGTTCTCCTTATCAGTTTCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 90 bp | CCATGTTCATTCCCCCACAGACATAACATGAAGCAACGTGCAGGCTaGTGGCTATGTTTTCAGCCAGTTGGGCGAATAAATTACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCSFPHRHNMKQRAG*WLCFQPVGRINYWP Trigger: TGGCCAGTAATTTATTCGCCCAACTGGCTGAAAACATAGCCAGCAGCCTGCACGTTGCTTCATGTTATGTCTGTGGGGGAATGAACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 90 bp | TGTTCATTCCCCCACAGACATAACATGAAGCAACGTGCAGGCTGCTaGCTATGTTTTCAGCCAGTTGGGCGAATAAATTACTGGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFPHRHNMKQRAGC*LCFQPVGRINYWPR Trigger: CCTTGGCCAGTAATTTATTCGCCCAACTGGCTGAAAACATAGCCAGCAGCCTGCACGTTGCTTCATGTTATGTCTGTGGGGGAATGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 90 bp | GAGGGTGCCTGCCAGGTATTTGGAGCTTCAAGTTGGTACCAAGAATaGTTTAAAGATGGGAAACGAGAGAATGGGCTTGGGTGTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EGACQVFGASSWYQE*FKDGKRENGLGCGD Trigger: ATCACCACACCCAAGCCCATTCTCTCGTTTCCCATCTTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAATACCTGGCAGGCACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 90 bp | AACTGGGGTGCGGTATCCCCACATTCCATCTTCTGCCCAGGTGGCTaGGCCATAATATTGAATTATTCTTTCAGGAGGCCATTCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NWGAVSPHSIFCPGG*AIILNYSFRRPFIV Trigger: GACAATGAATGGCCTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATGTGGGGATACCGCACCCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | ATAATTATCATAGCTCCAGCAGGACTTTGGAGTGAGTCAGACTGGTCAGGAAAGGGGGCATTAGTTCCCTaGCTTCCCATGGCCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IIIIAPAGLWSESDWSGKGALVP*LPMAIG Trigger: ACCAATGGCCATGGGAAGCAAGGGAACTAATGCCCC...CTTTCCTGACCAGTCTGACTCACTCCAAAGTCCTGCTGGAGCTATGATAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 90 bp | GTTAAGCATGTAAACTGGGGTGCGGTATCCCCACATTCCATCTTCTaGCCAGGTGGCTGGGCCATAATATTGAATTATTCTTTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKHVNWGAVSPHSIF*PGGWAIILNYSFRR Trigger: CCTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATGTGGGGATACCGCACCCCAGTTTACATGCTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 90 bp | TGTAAACTGGGGTGCGGTATCCCCACATTCCATCTTCTGCCCAGGTaGCTGGGCCATAATATTGAATTATTCTTTCAGGAGGCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CKLGCGIPTFHLLPR*LGHNIELFFQEAIH Trigger: ATGAATGGCCTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATGTGGGGATACCGCACCCCAGTTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCCCAGAGGGAAATACCTaGGTTTGGTTTAGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLSPEQRQGLTFIHASGPEGNT*VWFRRS Trigger: GGATCTTCTAAACCAAACCAAGGTATTTCCCTCTGG...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | CAAAGACAGGGCTTGACTTTTATACATGCATCAGGCAGGGGCAAGTCGGGTTTTGCCCCTGCAGTTTCATaGGTAATGATTTCTAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: QRQGLTFIHASGRGKSGFAPAVS*VMISST Trigger: AGTACTAGAAATCATTACCAATGAAACTGCAGGGGC...AAAACCCGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 90 bp | CTTCCTGGGCTAGGAGGTAGTCTAAGGCCAGTCTATTTTGATAAATaGCATTTCTCATTTTTGTGGCTTGCTGGGCAAGCAGATTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGLGGSLRPVYFDK*HFSFLWLAGQADSR Trigger: CCTTGAATCTGCTTGCCCAGCAAGCCACAAAAATGAGAAATGTCATTTATCAAAATAGACTGGCCTTAGACTACCTCCTAGCCCAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | CAAAGACAGGGCTTGACTTTTATACATGCATCAGGCAGGGGCAAGTCGGGTTTTGCTGTTTGGATATTTTaGACAATGAGGGGTAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQGLTFIHASGRGKSGFAVWIF*TMRGKR Trigger: TCTCTTACCCCTCATTGTCAAAAATATCCAAACAGC...AAAACCCGACTTGCCCCTGCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | AACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAAAAACCAGAGCAGGGCTGTaGTCATCTCACTGGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NMSCDLAMLQKEKQELTKTRAGL*SSHWHL Trigger: AAGGTGCCAGTGAGATGACAACAGCCCTGCTCTGGT...TTTTGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCGAAGATCCCCTTCCTTaGACCCGACATGAATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPEDPLP*TRHEFQ Trigger: TTGAAATTCATGTCGGGTCAAAGGAAGGGGATCTTC...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | TTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAATATGGCTGGCTGGGCCATAATATaGAATTATTCTTTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTMRGKRQGSIRQTPNMAGWAII*NYSFRR Trigger: CCTCCTGAAAGAATAATTCAATATTATGGCCCAGCC...AGCCATATTGGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTGAGCCCTGAACAAAGACAGGGCTTGACTTTTATACATGCATCAGGCTTAGCAGTTATTTCTTaGATGACCTTTCCTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRLSPEQRQGLTFIHASGLAVIS*MTFPSS Trigger: TGACGAAGGAAAGGTCATCAAAGAAATAACTGCTAA...GCCTGATGCATGTATAAAAGTCAAGCCCTGTCTTTGTTCAGGGCTCAGCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 90 bp | ATACAGAATTTTCCAATAATGGAGGTTTTTAAGAACCAGATGCTCTaGCTTGATGGTGCAGGTTCGAGGGAAGAGGCGGTTAGTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IQNFPIMEVFKNQML*LDGAGSREEAVSVK Trigger: TTTCACACTAACCGCCTCTTCCCTCGAACCTGCACCATCAAGTCAGAGCATCTGGTTCTTAAAAACCTCCATTATTGGAAAATTCTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | TGGATATTTTTGACAATGAGGGGTAAGAGACAAGGGAGTATAAGGCAAACTCCCAGCCTCTATGGCTGTTaGGATATTTTTGACAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: WIFLTMRGKRQGSIRQTPSLYGC*DIFDNE Trigger: CTCATTGTCAAAAATATCCAAACAGCCATAGAGGCT...GGGAGTTTGCCTTATACTCCCTTGTCTCTTACCCCTCATTGTCAAAAATATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACAGGTTCTAATGGTATTTaGGTAAGCATAATTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LNMSCDLAMLQKEKQELTGSNGI*VSIIGP Trigger: AGGGCCAATTATGCTTACCAAAATACCATTAGAACC...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS-3UTR CAA 90 bp | TTAAACATGTCTTGTGACCTTGCCATGCTACAGAAAGAAAAACAAGAACTTACATCAGAATTATTGCTTTaGCCCCTCCATAAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNMSCDLAMLQKEKQELTSELLL*PLHKVF Trigger: AAAGACTTTATGGAGGGGCAAAAGCAATAATTCTGA...TGTAAGTTCTTGTTTTTCTTTCTGTAGCATGGCAAGGTCACAAGACATGTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | AGCTTCAGCCGTGTGTGGACTGGTCAGCTTCCGGAGTaGCCAGAGCAGGGCTGTTGTCATCTCACTGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SFSRVWTGQLPE*PEQGCCHLTGT Trigger: GGTGCCAGTGAGATGACAACAGCCCTGCTCTGGTCACTCCGGAAGCTGACCAGTCCACACACGGCTGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 90 bp | CCGTGTGTGGACTGGTCAGCTTCCGGAGTGACCAGAGCAGGGCTGTaGTCATCTCACTGGCACCTTGGTTCCATCGTAGGATCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCVDWSASGVTRAGL*SSHWHLGSIVGSAG Trigger: CCCAGCTGATCCTACGATGGAACCAAGGTGCCAGTGAGATGACAACAGCCCTGCTCTGGTCACTCCGGAAGCTGACCAGTCCACACACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
||
| CDS CCA 72 bp | TCCGGAGTGACCAGAGCAGGGCTGTTGTCATCTCACTaGCACCTTGGTTCCATCGTAGGATCAGCTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGVTRAGLLSSH*HLGSIVGSAGL Trigger: CAACCCAGCTGATCCTACGATGGAACCAAGGTGCCAGTGAGATGACAACAGCCCTGCTCTGGTCACTCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | AGGGTTTTAGTCATGATGTTCCCCGACCACGTAGTGTaGGTGCAGTGGAGGCATCCCTCCCAGGGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RVLVMMFPDHVV*VQWRHPSQGSP Trigger: AGGAGAACCCTGGGAGGGATGCCTCCACTGCACCCACACTACGTGGTCGGGGAACATCATGACTAAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | GACTGGTCAGCTTCCGGAGTGACCAGAGCAGGGCTGTaGTCATCTCACTGGCACCTTGGTTCCATCGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: DWSASGVTRAGL*SSHWHLGSIVG Trigger: TCCTACGATGGAACCAAGGTGCCAGTGAGATGACAACAGCCCTGCTCTGGTCACTCCGGAAGCTGACCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | GTCATGATGTTCCCCGACCACGTAGTGTGGGTGCAGTaGAGGCATCCCTCCCAGGGTTCTCCTTTTAACATG | + |
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Preference number: 6 (lower is better) Translates to: VMMFPDHVVWVQ*RHPSQGSPFNM Trigger: CATGTTAAAAGGAGAACCCTGGGAGGGATGCCTCCACTGCACCCACACTACGTGGTCGGGGAACATCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | GATAGACATAGGCTCCTGGGCCAATTTCTTCACCGCTaGCTCGTGCCCCTAGCGGTGCTTTTAAACCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: DRHRLLGQFLHR*LVPLAVLLNLL Trigger: CAACAGGTTTAAAAGCACCGCTAGGGGCACGAGTCAGCGGTGAAGAAATTGGCCCAGGAGCCTATGTCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 90 bp | GTGGCCCACAGATCCAGTAGAGGCCAGAGGGTGCCTGCCAGGTATTaGGAGCTTCAAGTTGGTACCAAGAATGGTTTAAAGATGGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: VAHRSSRGQRVPARY*ELQVGTKNGLKMGN Trigger: GTTTCCCATCTTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAATACCTGGCAGGCACCCTCTGGCCTCTACTGGATCTGTGGGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | CCACTTGTCCTGGGCTGCTGGTTTCAGCTGACTGGATaGATGGATCCAAGGCACAATTCCTGCAACATTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLVLGCWFQLTG*MDPRHNSCNIS Trigger: AGAAATGTTGCAGGAATTGTGCCTTGGATCCATCCATCCAGTCAGCTGAAACCAGCAGCCCAGGACAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | GGTTCGAGGGAAGAGGCGGTTAGTGTGAAATTATCTTaGGGCATTAGTTCCCTTGCTTCCCATGGCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GSREEAVSVKLS*GISSLASHGHW Trigger: CCAATGGCCATGGGAAGCAAGGGAACTAATGCCCCAAGATAATTTCACACTAACCGCCTCTTCCCTCGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | CCTTCGTCATCAAGTTCCAGGCAGCAGTTAGTAAGGTaGAACTTTCCGCATACTCCCTCTTCCTGGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSSRQQLVR*NFPHTPSSWAR Trigger: CCTAGCCCAGGAAGAGGGAGTATGCGGAAAGTTCAACCTTACTAACTGCTGCCTGGAACTTGATGACGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | TTGATGGTGCAGGTTCGAGGGAAGAGGCGGTTAGTGTaGAATTATCTTGGGGCATTAGTTCCCTTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LMVQVRGKRRLV*NYLGALVPLLP Trigger: GGGAAGCAAGGGAACTAATGCCCCAAGATAATTTCACACTAACCGCCTCTTCCCTCGAACCTGCACCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | GCGGTATCCCCACATTCCATCTTCTGCCCAGGTGGCTaGGCCATAATATTGAATTATTCTTTCAGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVSPHSIFCPGG*AIILNYSFRRP Trigger: TGGCCTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATGTGGGGATACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | GGGTGCGGTATCCCCACATTCCATCTTCTGCCCAGGTaGCTGGGCCATAATATTGAATTATTCTTTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GCGIPTFHLLPR*LGHNIELFFQE Trigger: CTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATGTGGGGATACCGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 72 bp | TTCCCCCACAGACATAACATGAAGCAACGTGCAGGCTaGTGGCTATGTTTTCAGCCAGTTGGGCGAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: FPHRHNMKQRAG*WLCFQPVGRIN Trigger: ATTTATTCGCCCAACTGGCTGAAAACATAGCCAGCAGCCTGCACGTTGCTTCATGTTATGTCTGTGGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | TTGTGCAGTCCCAGCAAGTTGTTACTGGGGAATCGGTaGAACAAGCAGGGTGTGCATACCTATTTTTATGGC | + |
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Preference number: 6 (lower is better) Translates to: LCSPSKLLLGNR*NKQGVHTYFYG Trigger: GCCATAAAAATAGGTATGCACACCCTGCTTGTTCCACCGATTCCCCAGTAACAACTTGCTGGGACTGCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | CCCCACAGACATAACATGAAGCAACGTGCAGGCTGCTaGCTATGTTTTCAGCCAGTTGGGCGAATAAATTAC | + |
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Preference number: 6 (lower is better) Translates to: PHRHNMKQRAGC*LCFQPVGRINY Trigger: GTAATTTATTCGCCCAACTGGCTGAAAACATAGCCAGCAGCCTGCACGTTGCTTCATGTTATGTCTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | CCAGAGGGTGCCTGCCAGGTATTTGGAGCTTCAAGTTaGTACCAAGAATGGTTTAAAGATGGGAAACGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PEGACQVFGASS*YQEWFKDGKRE Trigger: CTCTCGTTTCCCATCTTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAATACCTGGCAGGCACCCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | AGATCCAGTAGAGGCCAGAGGGTGCCTGCCAGGTATTaGGAGCTTCAAGTTGGTACCAAGAATGGTTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RSSRGQRVPARY*ELQVGTKNGLK Trigger: CTTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAATACCTGGCAGGCACCCTCTGGCCTCTACTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | GTTTGGTTTAGAAGATCCCCTTCCTTTGACCCGACATaGATTTCAAACCAGGTCCCAGGTGAAGACTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: VWFRRSPSFDPT*ISNQVPGEDLG Trigger: CCCTAAGTCTTCACCTGGGACCTGGTTTGAAATTCATGTCGGGTCAAAGGAAGGGGATCTTCTAAACCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | TTTCCAATAATGGAGGTTTTTAAGAACCAGATGCTCTaGCTTGATGGTGCAGGTTCGAGGGAAGAGGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: FPIMEVFKNQML*LDGAGSREEAV Trigger: AACCGCCTCTTCCCTCGAACCTGCACCATCAAGTCAGAGCATCTGGTTCTTAAAAACCTCCATTATTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | ATAAGGATACGACATCCTTGCCAGAGGGAAATACCTTaGTTTGGTTTAGAAGATCCCCTTCCTTTGACCCGA | + |
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Preference number: 6 (lower is better) Translates to: IRIRHPCQREIP*FGLEDPLPLTR Trigger: TCGGGTCAAAGGAAGGGGATCTTCTAAACCAAACCAAGGTATTTCCCTCTGGCAAGGATGTCGTATCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | GGTATTTTGGTAAGCATAATTGGCCCTAGTGATTGTTaGTTAGTGGACCACGTTGTGCAGTCCCAGCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: GILVSIIGPSDC*LVDHVVQSQQV Trigger: AACTTGCTGGGACTGCACAACGTGGTCCACTAACCAACAATCACTAGGGCCAATTATGCTTACCAAAATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | TGCCAGGTATTTGGAGCTTCAAGTTGGTACCAAGAATaGTTTAAAGATGGGAAACGAGAGAATGGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CQVFGASSWYQE*FKDGKRENGLG Trigger: CCCAAGCCCATTCTCTCGTTTCCCATCTTTAAACCATTCTTGGTACCAACTTGAAGCTCCAAATACCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | TATAAGGATACGACATCCTTGCCAGAGGGAAATACCTaGGTTTGGTTTAGAAGATCCCCTTCCTTTGACCCG | + |
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Preference number: 6 (lower is better) Translates to: YKDTTSLPEGNT*VWFRRSPSFDP Trigger: CGGGTCAAAGGAAGGGGATCTTCTAAACCAAACCAAGGTATTTCCCTCTGGCAAGGATGTCGTATCCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 90 bp | TTTGTGGCTTGCTGGGCAAGCAGATTCAAGGCCCCTGCAGTTTCATaGGTAATGATTTCTAGTACTGCCTGCAATCTTATAATGCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: FVACWASRFKAPAVS*VMISSTACNLIMRL Trigger: TAACCGCATTATAAGATTGCAGGCAGTACTAGAAATCATTACCAATGAAACTGCAGGGGCCTTGAATCTGCTTGCCCAGCAAGCCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS TCA 72 bp | GGAACTGTTGGGTTGAGCGGGTCCGAGTTTTCTTTATaGTATATAGATAGACATAGGCTCCTGGGCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: GTVGLSGSEFSL*YIDRHRLLGQF Trigger: AAATTGGCCCAGGAGCCTATGTCTATCTATATATCATAAAGAAAACTCGGACCCGCTCAACCCAACAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 72 bp | ATGGGCTTGGGTGTGGTGATTCAGAATTATTGCTTTTaGCCCTCCATAAAGTCTTTCCTAGTGTCTCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: MGLGVVIQNYCF*PSIKSFLVSRC Trigger: ACAACGAGACACTAGGAAAGACTTTATGGAGGGGCAAAAGCAATAATTCTGAATCACCACACCCAAGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 72 bp | GAGAGAATGGGCTTGGGTGTGGTGATTCAGAATTATTaGTTTTGCCCCTCCATAAAGTCTTTCCTAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ERMGLGVVIQNY*FCPSIKSFLVS Trigger: AGACACTAGGAAAGACTTTATGGAGGGGCAAAAGCAATAATTCTGAATCACCACACCCAAGCCCATTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | CATTCCATCTTCTGCCCAGGTGGCTGGGCCATAATATaGAATTATTCTTTCAGGAGGCCATTCATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HSIFCPGGWAII*NYSFRRPFIVL Trigger: AAGGACAATGAATGGCCTCCTGAAAGAATAATTCAATATTATGGCCCAGCCACCTGGGCAGAAGATGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | TGCTGGGCAAGCAGATTCAAGGCCCCTGCAGTTTCATaGGTAATGATTTCTAGTACTGCCTGCAATCTTATA | + |
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Preference number: 6 (lower is better) Translates to: CWASRFKAPAVS*VMISSTACNLI Trigger: TATAAGATTGCAGGCAGTACTAGAAATCATTACCAATGAAACTGCAGGGGCCTTGAATCTGCTTGCCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 90 bp | GTTGGTACCAAGAATGGTTTAAAGATGGGAAACGAGAGAATGGGCTaGGGTGTGGTGATTCAGAATTATTGCTTTTGCCCCTCCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: VGTKNGLKMGNERMG*GVVIQNYCFCPSIK Trigger: CTTTATGGAGGGGCAAAAGCAATAATTCTGAATCACCACACCCAAGCCCATTCTCTCGTTTCCCATCTTTAAACCATTCTTGGTACCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | AAGAATGGTTTAAAGATGGGAAACGAGAGAATGGGCTaGGGTGTGGTGATTCAGAATTATTGCTTTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: KNGLKMGNERMG*GVVIQNYCFCP Trigger: GGGGCAAAAGCAATAATTCTGAATCACCACACCCAAGCCCATTCTCTCGTTTCCCATCTTTAAACCATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CCA 72 bp | AAGATTACGGGAAAGAGTGAGCCCATGGATACTATCTaGCAAACATCAAAGTATAAGGATACGACATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KITGKSEPMDTI*QTSKYKDTTSL Trigger: CAAGGATGTCGTATCCTTATACTTTGATGTTTGCCAGATAGTATCCATGGGCTCACTCTTTCCCGTAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS GCA 72 bp | TCTGGCAAACATCAAAGTATAAGGATACGACATCCTTaGCAGAGGGAAATACCTTGGTTTGGTTTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SGKHQSIRIRHP*QREIPWFGLED Trigger: ATCTTCTAAACCAAACCAAGGTATTTCCCTCTGGCAAGGATGTCGTATCCTTATACTTTGATGTTTGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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| CDS CAA 72 bp | ATCTGGCAAACATCAAAGTATAAGGATACGACATCCTaGCCAGAGGGAAATACCTTGGTTTGGTTTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: IWQTSKYKDTTS*PEGNTLVWFRR Trigger: TCTTCTAAACCAAACCAAGGTATTTCCCTCTGGCAAGGATGTCGTATCCTTATACTTTGATGTTTGCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394323.3 |
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