Pregenerated sensors for ERICH6 (Homo sapiens)
Ensembl gene IDs: ENSG00000163645Ensembl transcript IDs: ENST00000295910.11, ENST00000474463.5, ENST00000491361.5, ENST00000491716.1, ENST00000498386.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCGGGTCTCCGAAGCCGCTAGGCGAGCGCAAGTGGGCCATGGCTaGCGGGAGGCGGGATTACAGCCAGCTCTTTGGCCGCGGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PRVSEAARRAQVGHG*REAGLQPALWPRPR Trigger: CCGGGGCCGCGGCCAAAGAGCTGGCTGTAATCCCGCCTCCCGCCAGCCATGGCCCACTTGCGCTCGCCTAGCGGCTTCGGAGACCCGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000491361.5 ENST00000498386.1 |
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| CDS CCA 90 bp | TGGTCCTTCTTCCCCGGGTCTCCGAAGCCGCTAGGCGAGCGCAAGTaGGCCATGGCTGGCGGGAGGCGGGATTACAGCCAGCTCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: WSFFPGSPKPLGERK*AMAGGRRDYSQLFG Trigger: GCCAAAGAGCTGGCTGTAATCCCGCCTCCCGCCAGCCATGGCCCACTTGCGCTCGCCTAGCGGCTTCGGAGACCCGGGGAAGAAGGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000491361.5 ENST00000498386.1 |
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| CDS CCA 90 bp | CTGGAGGGTGGGCTTGCGCTCGGCGTTTCAGTGCTGGTCGCGCTCTaGCTGGGCACGAACGTAGAGGTCAGGCTAGGGCTGACGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: LEGGLALGVSVLVAL*LGTNVEVRLGLTML Trigger: CAGCATCGTCAGCCCTAGCCTGACCTCTACGTTCGTGCCCAGCCAGAGCGCGACCAGCACTGAAACGCCGAGCGCAAGCCCACCCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000498386.1 |
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| CDS TCA 90 bp | GGGGGCGCACGTCTGGGAAGTCGTCGTCGTAGTCACCGATGTCCGTaGCCTCCTCCTCCTCCTCCTCCACCTCTTCCTCCTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GGARLGSRRRSHRCP*PPPPPPPPLPPPPP Trigger: TGGAGGAGGAGGAGGAAGAGGTGGAGGAGGAGGAGGAGGAGGTCACGGACATCGGTGACTACGACGACGACTTCCCAGACGTGCGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474463.5 |
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| CDS TCA 90 bp | GGGGGCGCACGTCTGGGAAGTCGTCGTCGTAGTCACCGATGTCCGTaGCCTCTTCCTCCTCCTCCTCCACCTCTTCCTCCTCCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GGARLGSRRRSHRCP*PLPPPPPPLPPPPP Trigger: AGGAGGAGGAGGAGGAAGAGGTGGAGGAGGAGGAGGAAGAGGTCACGGACATCGGTGACTACGACGACGACTTCCCAGACGTGCGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498386.1 |
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| CDS GCA 90 bp | TTCCAGAGGTACTCTTCGCTGAACGTCTCAGGGGCCTCCAACTCCTaGTCTTCCCCCACCAACTCCTCCTCCACCACCTCCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FQRYSSLNVSGASNS*SSPTNSSSTTSSSS Trigger: GGAGGAGGAGGAGGTGGTGGAGGAGGAGTTGGTGGGGGAAGAGCAGGAGTTGGAGGCCCCTGAGACGTTCAGCGAAGAGTACCTCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295910.11 |
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| CDS CCA 90 bp | TCTTCCTCCTCCTCCTCCTCCTCTAACTCCTCCTCTGACTCCTTCTaGTCCTTCTTCCCCGGGTCTCCGAAGCCGCTAGGCGAGCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SSSSSSSSNSSSDSF*SFFPGSPKPLGERK Trigger: CTTGCGCTCGCCTAGCGGCTTCGGAGACCCGGGGAAGAAGGACCAGAAGGAGTCAGAGGAGGAGTTAGAGGAGGAGGAGGAGGAGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000491361.5 ENST00000498386.1 |
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| CDS GCA 90 bp | TATTTTAGGGAAACTTTTATGCGAGGAGGTGCTGGAGGGTGGGCTTaGGCTCGGCGTTTCAGTGCTGGTCGCGCTCTGGCTGGGCACGAA | + |
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Preference number: 5 (lower is better) Translates to: YFRETFMRGGAGGWA*ARRFSAGRALAGHE Trigger: TTCGTGCCCAGCCAGAGCGCGACCAGCACTGAAACGCCGAGCGCAAGCCCACCCTCCAGCACCTCCTCGCATAAAAGTTTCCCTAAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000498386.1 |
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| CDS CCA 90 bp | CTGAAATATTTTAGGGAAACTTTTATGCGAGGAGGTGCTGGAGGGTaGGCTTGCGCTCGGCGTTTCAGTGCTGGTCGCGCTCTGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LKYFRETFMRGGAGG*ACARRFSAGRALAG Trigger: CCCAGCCAGAGCGCGACCAGCACTGAAACGCCGAGCGCAAGCCCACCCTCCAGCACCTCCTCGCATAAAAGTTTCCCTAAAATATTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000498386.1 |
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| CDS TCA 90 bp | TCCCAAACCTGGCTTGAGGGAAAATTCACACATCCTTCAAGTTTATaGAACAGGCGACGGATCTTTATTAAACTGGCCAGCAGAAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SQTWLEGKFTHPSSL*NRRRIFIKLASRRR Trigger: CCTTCTTCTGCTGGCCAGTTTAATAAAGATCCGTCGCCTGTTTCATAAACTTGAAGGATGTGTGAATTTTCCCTCAAGCCAGGTTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 90 bp | GAATCCAGCACTGCTAGGATAGCAGGGTTAGTGGGCATATCTTCTTaGACTATACAAGTAAAACCATTTACCTTGTTGGGCACTCGAATG | + |
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Preference number: 5 (lower is better) Translates to: ESSTARIAGLVGISS*TIQVKPFTLLGTRM Trigger: CATTCGAGTGCCCAACAAGGTAAATGGTTTTACTTGTATAGTCCAAGAAGATATGCCCACTAACCCTGCTATCCTAGCAGTGCTGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 90 bp | CACATCCTTCAAGTTTATGAAACAGGCGACGGATCTTTATTAAACTaGCCAGCAGAAGAAGGTCATCTCCACTTACGTATCGGAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: HILQVYETGDGSLLN*PAEEGHLHLRIGGL Trigger: CAATCCTCCGATACGTAAGTGGAGATGACCTTCTTCTGCTGGCCAGTTTAATAAAGATCCGTCGCCTGTTTCATAAACTTGAAGGATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 90 bp | GGGTTTGGTAGCTTCACTTTGGTTCCAACACTGATTCTTGCCTGTTaGCCCATTGCTAGAAAAGTTATAGAAATCTTGTCTTGTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: GFGSFTLVPTLILAC*PIARKVIEILSCSK Trigger: CTTAGAACAAGACAAGATTTCTATAACTTTTCTAGCAATGGGCCAACAGGCAAGAATCAGTGTTGGAACCAAAGTGAAGCTACCAAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 72 bp | TTCCCCGGGTCTCCGAAGCCGCTAGGCGAGCGCAAGTaGGCCATGGCTGGCGGGAGGCGGGATTACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FPGSPKPLGERK*AMAGGRRDYSQ Trigger: CTGGCTGTAATCCCGCCTCCCGCCAGCCATGGCCCACTTGCGCTCGCCTAGCGGCTTCGGAGACCCGGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474463.5 ENST00000491361.5 ENST00000498386.1 |
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| CDS CCA 72 bp | GGGCTTGCGCTCGGCGTTTCAGTGCTGGTCGCGCTCTaGCTGGGCACGAACGTAGAGGTCAGGCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLALGVSVLVAL*LGTNVEVRLGL Trigger: CAGCCCTAGCCTGACCTCTACGTTCGTGCCCAGCCAGAGCGCGACCAGCACTGAAACGCCGAGCGCAAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000498386.1 |
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| CDS TCA 72 bp | CGTCTGGGAAGTCGTCGTCGTAGTCACCGATGTCCGTaGCCTCCTCCTCCTCCTCCTCCACCTCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RLGSRRRSHRCP*PPPPPPPPLPP Trigger: AGGAGGAAGAGGTGGAGGAGGAGGAGGAGGAGGTCACGGACATCGGTGACTACGACGACGACTTCCCAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474463.5 |
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| CDS CCA 72 bp | TCCTCCTCCTCCTCTAACTCCTCCTCTGACTCCTTCTaGTCCTTCTTCCCCGGGTCTCCGAAGCCGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSNSSSDSF*SFFPGSPKPLG Trigger: GCCTAGCGGCTTCGGAGACCCGGGGAAGAAGGACCAGAAGGAGTCAGAGGAGGAGTTAGAGGAGGAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000491361.5 ENST00000498386.1 |
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| CDS TCA 72 bp | CGTCTGGGAAGTCGTCGTCGTAGTCACCGATGTCCGTaGCCTCTTCCTCCTCCTCCTCCACCTCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RLGSRRRSHRCP*PLPPPPPPLPP Trigger: AGGAGGAAGAGGTGGAGGAGGAGGAGGAAGAGGTCACGGACATCGGTGACTACGACGACGACTTCCCAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498386.1 |
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| CDS CCA 72 bp | TTTAGGGAAACTTTTATGCGAGGAGGTGCTGGAGGGTaGGCTTGCGCTCGGCGTTTCAGTGCTGGTCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: FRETFMRGGAGG*ACARRFSAGRA Trigger: AGCGCGACCAGCACTGAAACGCCGAGCGCAAGCCCACCCTCCAGCACCTCCTCGCATAAAAGTTTCCCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000474463.5 ENST00000498386.1 |
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| CDS TCA 72 bp | GCCTTGAGTCTGTCGACCTCACTACCATGGGCTGCATaGGGGTCAATAGCAATTAATTCAGCTTTAGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ALSLSTSLPWAA*GSIAINSALGG Trigger: ACCCCCTAAAGCTGAATTAATTGCTATTGACCCTCATGCAGCCCATGGTAGTGAGGTCGACAGACTCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 90 bp | AACTGGCCAGCAGAAGAAGGTCATCTCCACTTACGTATCGGAGGATaGGAATCTCCTCAGGGTTTGGTAGCTTCACTTTGGTTCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: NWPAEEGHLHLRIGG*ESPQGLVASLWFQH Trigger: GTGTTGGAACCAAAGTGAAGCTACCAAACCCTGAGGAGATTCCAATCCTCCGATACGTAAGTGGAGATGACCTTCTTCTGCTGGCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS GCA 72 bp | TCTCTTCTTTGTATGCCAGAATGGATGGTGGTCCGATaGTGGGTAACGTTCTTAGAGAAGGCTCGAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLCMPEWMVVR*WVTFLEKARTV Trigger: CACTGTTCGAGCCTTCTCTAAGAACGTTACCCAGCATCGGACCACCATCCATTCTGGCATACAAAGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295910.11 ENST00000491361.5 |
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| CDS CAA 72 bp | GCAGAAGAAGGTCATCTCCACTTACGTATCGGAGGATaGGAATCTCCTCAGGGTTTGGTAGCTTCACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: AEEGHLHLRIGG*ESPQGLVASLW Trigger: CCAAAGTGAAGCTACCAAACCCTGAGGAGATTCCAATCCTCCGATACGTAAGTGGAGATGACCTTCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 72 bp | CTTCTTTGTATGCCAGAATGGATGGTGGTCCGATGCTaGGTAACGTTCTTAGAGAAGGCTCGAACAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LLCMPEWMVVRC*VTFLEKARTVL Trigger: TAACACTGTTCGAGCCTTCTCTAAGAACGTTACCCAGCATCGGACCACCATCCATTCTGGCATACAAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295910.11 ENST00000491361.5 |
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| CDS CCA 72 bp | TGCCTAAATTGGAGCTCTCTTCTTTGTATGCCAGAATaGATGGTGGTCCGATGCTGGGTAACGTTCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: CLNWSSLLCMPE*MVVRCWVTFLE Trigger: CTCTAAGAACGTTACCCAGCATCGGACCACCATCCATTCTGGCATACAAAGAAGAGAGCTCCAATTTAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295910.11 ENST00000491361.5 |
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| CDS CAA 72 bp | TCCTTGAAGTTAATGCCTAAATTGGAGCTCTCTTCTTaGTATGCCAGAATGGATGGTGGTCCGATGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLKLMPKLELSS*YARMDGGPMLG Trigger: ACCCAGCATCGGACCACCATCCATTCTGGCATACAAAGAAGAGAGCTCCAATTTAGGCATTAACTTCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295910.11 ENST00000491361.5 |
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| CDS CAA 90 bp | TCCTCTTCATCCTTGAAGTTAATGCCTAAATTGGAGCTCTCTTCTTaGTATGCCAGAATGGATGGTGGTCCGATGCTGGGTAACGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSLKLMPKLELSS*YARMDGGPMLGNVL Trigger: AAGAACGTTACCCAGCATCGGACCACCATCCATTCTGGCATACAAAGAAGAGAGCTCCAATTTAGGCATTAACTTCAAGGATGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295910.11 ENST00000491361.5 |
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| CDS TCA 72 bp | TGGCTTGAGGGAAAATTCACACATCCTTCAAGTTTATaGAACAGGCGACGGATCTTTATTAAACTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WLEGKFTHPSSL*NRRRIFIKLAS Trigger: GCTGGCCAGTTTAATAAAGATCCGTCGCCTGTTTCATAAACTTGAAGGATGTGTGAATTTTCCCTCAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 72 bp | CAAGTTTATGAAACAGGCGACGGATCTTTATTAAACTaGCCAGCAGAAGAAGGTCATCTCCACTTACGTATC | + |
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Preference number: 6 (lower is better) Translates to: QVYETGDGSLLN*PAEEGHLHLRI Trigger: GATACGTAAGTGGAGATGACCTTCTTCTGCTGGCCAGTTTAATAAAGATCCGTCGCCTGTTTCATAAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 90 bp | GCTTTGAATCATCTTCAGAGAAATGAGTCTGTTCCCTTGATATTATaGCAAAATGTCTGGCCATTCGTTGCTCCTGTTTCCTTTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ALNHLQRNESVPLIL*QNVWPFVAPVSFAG Trigger: CCCTGCAAAGGAAACAGGAGCAACGAATGGCCAGACATTTTGCAATAATATCAAGGGAACAGACTCATTTCTCTGAAGATGATTCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS GCA 72 bp | TTTGTGTTGTCCCATCTGGAAATGAAGTCAGAAACTTaGTCCCATGTTTGTAGTGCTTCTCTAAGAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FVLSHLEMKSET*SHVCSASLRAH Trigger: ATGAGCTCTTAGAGAAGCACTACAAACATGGGAGCAAGTTTCTGACTTCATTTCCAGATGGGACAACACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 72 bp | TCTTCTTGGACTATACAAGTAAAACCATTTACCTTGTaGGGCACTCGAATGATGGCTAGGTTTCCAGATGGA | + |
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Preference number: 6 (lower is better) Translates to: SSWTIQVKPFTL*GTRMMARFPDG Trigger: TCCATCTGGAAACCTAGCCATCATTCGAGTGCCCAACAAGGTAAATGGTTTTACTTGTATAGTCCAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 90 bp | GTGAAGAAAGGTAGGAAGGTTGCTTTAATTTTTCCCAAACCTGGCTaGAGGGAAAATTCACACATCCTTCAAGTTTATGAAACAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: VKKGRKVALIFPKPG*RENSHILQVYETGD Trigger: GTCGCCTGTTTCATAAACTTGAAGGATGTGTGAATTTTCCCTCAAGCCAGGTTTGGGAAAAATTAAAGCAACCTTCCTACCTTTCTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 90 bp | GGGTTTGGTTTTTATTTGCTCCTCATAGATATAGTCAATCAGATTTaGGAAAGCAATACAACAGGAGGCATGCCCTTTTGGTTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GFGFYLLLIDIVNQI*ESNTTGGMPFWFRG Trigger: TCCTCTGAACCAAAAGGGCATGCCTCCTGTTGTATTGCTTTCCAAAATCTGATTGACTATATCTATGAGGAGCAAATAAAAACCAAACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CCA 72 bp | AGCTTCACTTTGGTTCCAACACTGATTCTTGCCTGTTaGCCCATTGCTAGAAAAGTTATAGAAATCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFTLVPTLILAC*PIARKVIEILS Trigger: AGACAAGATTTCTATAACTTTTCTAGCAATGGGCCAACAGGCAAGAATCAGTGTTGGAACCAAAGTGAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 90 bp | TTTTTAAGCGCTTTGAATCATCTTCAGAGAAATGAGTCTGTTCCCTaGATATTATTGCAAAATGTCTGGCCATTCGTTGCTCCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSALNHLQRNESVP*ILLQNVWPFVAPVS Trigger: GGAAACAGGAGCAACGAATGGCCAGACATTTTGCAATAATATCAAGGGAACAGACTCATTTCTCTGAAGATGATTCAAAGCGCTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 72 bp | GCTTTGAATCATCTTCAGAGAAATGAGTCTGTTCCCTaGATATTATTGCAAAATGTCTGGCCATTCGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ALNHLQRNESVP*ILLQNVWPFVA Trigger: AGCAACGAATGGCCAGACATTTTGCAATAATATCAAGGGAACAGACTCATTTCTCTGAAGATGATTCAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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| CDS CAA 72 bp | ATATCTTCTTGGACTATACAAGTAAAACCATTTACCTaGTTGGGCACTCGAATGATGGCTAGGTTTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ISSWTIQVKPFT*LGTRMMARFPD Trigger: ATCTGGAAACCTAGCCATCATTCGAGTGCCCAACAAGGTAAATGGTTTTACTTGTATAGTCCAAGAAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295910.11 ENST00000491361.5 ENST00000491716.1 |
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