RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERCC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163161

Ensembl transcript IDs: ENST00000285398.7, ENST00000426778.5, ENST00000445889.5, ENST00000460485.1, ENST00000462306.5, ENST00000490062.1, ENST00000491292.5, ENST00000494464.5, ENST00000642308.1, ENST00000642972.1, ENST00000643982.1, ENST00000644317.1, ENST00000645233.1, ENST00000645467.1, ENST00000645504.1, ENST00000645736.1, ENST00000646042.1, ENST00000646654.1, ENST00000647169.1, ENST00000647496.1

Found 1217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTTCGGAACATCTTGGCTCACCGCTTC +
Preference number: 1 (lower is better)
Translates to: SSRTRVAVKPSLQWA*TMVSTLRNILAHRF
Trigger: GAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR CCA 90 bp GCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTT +
Preference number: 1 (lower is better)
Translates to: AGMVCTSSRIMRPHS*VLSHSMTRSASQDL
Trigger: AAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR GCA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTTCGGAACATCTTGGCTGGTATGGTG +
Preference number: 1 (lower is better)
Translates to: SSRTRVAVKPSLQWA*TMVSTLRNILAGMV
Trigger: CACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR GCA 90 bp AGCTGGGAGCGGCTCATGAGAAGCGTGGCCTCACCCAGAACACAATaGTGGATCCAGAGTGTAGCGGCTCATGAGAAGCATGGCCTCACC +
Preference number: 1 (lower is better)
Translates to: SWERLMRSVASPRTQ*WIQSVAAHEKHGLT
Trigger: GGTGAGGCCATGCTTCTCATGAGCCGCTACACTCTGGATCCAGCATTGTGTTCTGGGTGAGGCCACGCTTCTCATGAGCCGCTCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR TCA 90 bp CGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCTCACCGCTTCTGTCTTGCTT +
Preference number: 1 (lower is better)
Translates to: RGSQSNPAYSGPARW*APFGTSWLTASVLL
Trigger: AAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR CCA 90 bp CAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCAC +
Preference number: 1 (lower is better)
Translates to: QPMGLSLASEVNRQI*LSSMVDHILNWAFH
Trigger: GTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGCACCCTTCGGAACATCTTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: LSSSRTRVAVKPSLQ*ACTMVSTLRNILAG
Trigger: ACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGCACCCTTCGGAACATCTTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: LSSSRTRVAVKPSLQ*ACTMVSTLRNILAH
Trigger: GTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR TCA 90 bp CGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCAT +
Preference number: 1 (lower is better)
Translates to: RGSQSNPAYSGPARW*APFGTSWLVWCALH
Trigger: ATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 90 bp CTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGA +
Preference number: 1 (lower is better)
Translates to: LEERVYMFAGRLAPR*VVLHVHSVVGPRHR
Trigger: TCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CCA 90 bp AAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTC +
Preference number: 1 (lower is better)
Translates to: KSGCTCLLGALLRDE*YSMYTVSSAPDIEL
Trigger: GAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR TCA 90 bp GCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCAC +
Preference number: 1 (lower is better)
Translates to: APQKQLSCPAPDSVF*QCMQQSHQPGTFQH
Trigger: GTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 90 bp AACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTaGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACC +
Preference number: 1 (lower is better)
Translates to: NRQIWLSSMVDHILN*AFHCSTETAELPST
Trigger: GGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 90 bp GGACCACATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGC +
Preference number: 1 (lower is better)
Translates to: GPHLELGFPLLHRNS*VAQHQTAFSDSACS
Trigger: GCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR GCA 90 bp CAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTaGACGCCCGTTTCCAAACATCTTTCGCAAGCTCTTCTCCTGATA +
Preference number: 1 (lower is better)
Translates to: QGLSSTAGKNNDPRT*TPVSKHLSQALLLI
Trigger: TATCAGGAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 90 bp TGGAGGTGTGGTCGTCCTTCAGCGGCATTTGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTTTGGTGCCTGACTCATCCACCTGCT +
Preference number: 1 (lower is better)
Translates to: WRCGRPSAAFAACSP*LHIHPLWCLTHPPA
Trigger: AGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR GCA 90 bp TGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTT +
Preference number: 1 (lower is better)
Translates to: WLSSMVDHILNWAFH*STETAELPSTRQRF
Trigger: AAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR GCA 90 bp TCCTCGGCATCCAGGTCAGTGGCTGCCAGGACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SSASRSVAARTFCKS*CCSSFVENAKSSSS
Trigger: GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACTGACCTGGATGCCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CCA 90 bp CTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGC +
Preference number: 1 (lower is better)
Translates to: LIEVKQVHGDVRFTL*ICHSGSGGPTTAFS
Trigger: GCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 90 bp TTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCT +
Preference number: 1 (lower is better)
Translates to: FGLPDAWSHHGMRSE*GHLLPADQTKCHLP
Trigger: AGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR GCA 90 bp GATGGTGAGCACCCTTCGGAACATCTTGGCTCACCGCTTCTGTCTTaGTTCCTTCAGTCTATTTCCAGCACAGCAGCCAGGGCAGTATTT +
Preference number: 1 (lower is better)
Translates to: DGEHPSEHLGSPLLS*FLQSISSTAARAVF
Trigger: AAATACTGCCCTGGCTGCTGTGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR TCA 90 bp CCCCACAGGAAATCTGAATGGCACATTCTCATGGCTGCCACAGGCTaGCAACATGGAGCACCTATGCCTATTGTTACATTAGCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: PHRKSEWHILMAATG*QHGAPMPIVTLAGQ
Trigger: CTGCCCTGCTAATGTAACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGCCATTCAGATTTCCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAG +
Preference number: 1 (lower is better)
Translates to: SPSEFLKRHSRITGS*RRCWITSGWQLSTK
Trigger: CTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR CCA 90 bp TGGCTCTGCAATAGCCACCAAGAAGTCTTGGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAAGATATGGCCATCGGGAGCCACCCA +
Preference number: 1 (lower is better)
Translates to: WLCNSHQEVLGIFVN*REGFQEDMAIGSHP
Trigger: TGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCTATTGCAGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR GCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTG +
Preference number: 1 (lower is better)
Translates to: EFLKRHSRITGSWRR*WITSGWQLSTKYLL
Trigger: CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR CCA 90 bp TTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTGC +
Preference number: 1 (lower is better)
Translates to: FLKRHSRITGSWRRC*ITSGWQLSTKYLLC
Trigger: GCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR CCA 90 bp TCAGTCGTTATGCTCCCCACAGGAAATCTGAATGGCACATTCTCATaGCTGCCACAGGCTGACAACATGGAGCACCTATGCCTATTGTTA +
Preference number: 1 (lower is better)
Translates to: SVVMLPTGNLNGTFS*LPQADNMEHLCLLL
Trigger: TAACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGAGCATAACGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CCA 90 bp CTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGG +
Preference number: 1 (lower is better)
Translates to: LLHPCPFAHRSQTGP*GCQIYPVDLSLGKW
Trigger: CCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 90 bp ACATTAGAACTGTATTTTCTCAGAGCTGTGGAGGCTGAAAGTCTATaGTCAAGGTATCAGCCGATTCAGTTTCTGGTGAAGGCTCTTGTC +
Preference number: 1 (lower is better)
Translates to: TLELYFLRAVEAESL*SRYQPIQFLVKALV
Trigger: GACAAGAGCCTTCACCAGAAACTGAATCGGCTGATACCTTGATCATAGACTTTCAGCCTCCACAGCTCTGAGAAAATACAGTTCTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR TCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 2 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 2 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCATGCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 2 (lower is better)
Translates to: HSMTRSASQDLLVVWPSMQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 2 (lower is better)
Translates to: AADGLVLGIGGEPADLAVPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...GACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTCCCCACAGGAAATCTaGATGGCACATTCTCATGGC +
Preference number: 2 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPSPQEI*MAHSHG
Trigger: GCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGA...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR GCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp AGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: SHSMTRSASQDLLVVWPSSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...GCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAGCATCCCGCAGGCGTTaGGCCCCTCACCCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRASRRR*APHPSP
Trigger: GGGAGACGGGTGAGGGGCGCAACGCCTGCGGGATGC...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445889.5
3UTR-3UTR CCA 90 bp ACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: TRDFPAPQGRTMTPERARLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...GCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 2 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 90 bp AGCCACCCAGAGGGGCCTGGAGGTGTGGTCGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGCTCCATATTCATCCACTTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: SHPEGPGGVVVLQRH*QPVVLGSIFIHFGA
Trigger: GGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CAA 90 bp ATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: MVCTSSRIMRPHSWV*SHSMTRSASQDLLV
Trigger: CACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 2 (lower is better)
Translates to: GGVAQHGVGANGNGAADGFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR TCA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 2 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp CCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 2 (lower is better)
Translates to: PSEFLKRHSRITGSWRRCPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...GCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 2 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 2 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 2 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 2 (lower is better)
Translates to: AGVHVCWAPCSAMSGTPCMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...ACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 2 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp CTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGACCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: LTVHAAVTPTRDFPAPQGPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...TCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGACCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 2 (lower is better)
Translates to: GRFACESLCDELSGLPFRPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...TCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 2 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 2 (lower is better)
Translates to: TVSSAPDIELMVPKRRDAKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR CAA 90 bp TTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCC +
Preference number: 2 (lower is better)
Translates to: FLKRLKSGCTCLLGA*LRDEWYSMYTVSSA
Trigger: GGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: TVSSAPDIELMVPKRRDATLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp AGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: STAGKNNDPRTCTPVSKHIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp ATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: MGLSLASEVNRQIWLSSMPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...CATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 2 (lower is better)
Translates to: VLMATEQPMGLSLASEVNNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GRFACESLCDELSGLPFRPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: APQGRTMTPERARPFPNILYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 2 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 90 bp GAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTaGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: EVNRQIWLSSMVDHI*NWAFHCSTETAELP
Trigger: GGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: GMVCTSSRIMRPHSWVLSTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCACGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 2 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp ATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 2 (lower is better)
Translates to: MGLSLASEVNRQIWLSSMNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCACAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 2 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAAGTCAACTCATGTCATaGTCTGCTCAAATCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPSQLMS*SAQIPQ
Trigger: CTGAGGGATTTGAGCAGAGCATGACATGAGTTGACT...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR-3UTR CCA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 2 (lower is better)
Translates to: FPKALEERVYMFAGRLAPASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 2 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCATTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 2 (lower is better)
Translates to: PADLAVVNGGPHLELGFPFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR TCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGAATGGCTGCCACAGGCTaGCAACATGGAGCACCTATG +
Preference number: 2 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRMAATG*QHGAPM
Trigger: CATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCAT...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR GCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 2 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 2 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGACACTCACTTTGGGCTaGATTTCCAAATTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLTLTLG*ISKFSL
Trigger: CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGT...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR CCA 90 bp GCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGACAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: ASPSEFLKRHSRITGSWRQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...TCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGACTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GRFACESLCDELSGLPFRLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...TCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 2 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLERITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 2 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGAPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCACCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 2 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGCAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 2 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 2 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 2 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 90 bp CACATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: HILNWAFHCSTETAE*PSTRQRFLTVHAAV
Trigger: GACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 90 bp GGTCTTGAACGAAGTACCCTGCCTAAGCATCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGAT +
Preference number: 2 (lower is better)
Translates to: GLERSTLPKHHFLKR*KSGCTCLLGALLRD
Trigger: ATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAGGGTACTTCGTTCAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 90 bp AGCTTACAGTGGGCCTGCACGATGGTGAGCACCCTTCGGAACATCTaGGCTCACCGCTTCTGTCTTGCTTCCTTCAGTCTATTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SLQWACTMVSTLRNI*AHRFCLASFSLFPA
Trigger: TGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR-3UTR TCA 90 bp TTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: LNWAFHCSTETAELPSTRPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...TCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCGACAAGAAGGGCAGGTaGGAGAAAGCATGCTCCGGT +
Preference number: 2 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGDKKGR*EKACSG
Trigger: ACCGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTC...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR GCA 90 bp GCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 2 (lower is better)
Translates to: AFHCSTETAELPSTRQRFPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...AAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLEQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 2 (lower is better)
Translates to: ASPSEFLKRHSRITGSWRAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGACCCAGAACACAATGCTaGATCCAGAGTGTAGCGGCT +
Preference number: 2 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRPRTQC*IQSVAA
Trigger: AGCCGCTACACTCTGGATCCAGCATTGTGTTCTGGG...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CAA 90 bp CCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACA +
Preference number: 2 (lower is better)
Translates to: PKHHFLKRLKSGCTC*LGALLRDEWYSMYT
Trigger: TGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: HTGLWRCSHYSAAPSSWLIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...AAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR TCA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGCAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 2 (lower is better)
Translates to: SSRTRVAVKPSLQWACTMQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...CATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 2 (lower is better)
Translates to: DVAIILQLHPVGFVELRPWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCATTGTGTACTCACATaGCAAGAAGGGCAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLEHCVLT*QEGQVR
Trigger: TCTCACCTGCCCTTCTTGTCATGTGAGTACACAATG...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR GCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGACCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 2 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
3UTR-3UTR GCA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 2 (lower is better)
Translates to: FPKALEERVYMFAGRLAPFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGCACATTCTCATGGCTaGCACAGGCTGACAACATGG +
Preference number: 2 (lower is better)
Translates to: GRFACESLCDELSGLPFRAHSHG*HRLTTW
Trigger: CCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGC...TCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 2 (lower is better)
Translates to: PQGRTMTPERARPFPNIFAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 2 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: FPKALEERVYMFAGRLAPVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCAAGGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 2 (lower is better)
Translates to: GRTMTPERARPFPNIFRKDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...CTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 2 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 2 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: VFLLHASEFRDHLEAITLSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 2 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGANWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 2 (lower is better)
Translates to: TVSSAPDIELMVPKRRDAICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 2 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMLLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGACACAGGCTGACAACATaGAGCACCTATGCCTATTGT +
Preference number: 2 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRHRLTT*STYAYC
Trigger: ACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTG...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR TCA 90 bp GGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: GSWRRCWITSGWQLSTKYTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
3UTR-3UTR TCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCATCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCATCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCCCCACAGGAAATCTaGATGGCACATTCTCATGGC +
Preference number: 2 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVSPQEI*MAHSHG
Trigger: GCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGA...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR GCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 2 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACAACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 2 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
3UTR-3UTR CCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 2 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp GAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTTGCAGCCCAACGCTGACAGCGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: ELPEVLGDVTGLQPNADSGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 2 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGATTTTCTCAGAGCTGTaGAGGCTGAAAGTCTATGAT +
Preference number: 2 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPIFSEL*RLKVYD
Trigger: ATCATAGACTTTCAGCCTCCACAGCTCTGAGAAAAT...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR TCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCACCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCATTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 2 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGCACATTCTCATGGCTaGCACAGGCTGACAACATGG +
Preference number: 2 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSAHSHG*HRLTTW
Trigger: CCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGC...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 2 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp TTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 2 (lower is better)
Translates to: FFFFILVHLLIEVKQVHGLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...CCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 2 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 2 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 2 (lower is better)
Translates to: VFLLHASEFRDHLEAITLSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCCCAGCACACTCACTTTaGGCTGCATTTCCAAATTCT +
Preference number: 2 (lower is better)
Translates to: DVAIILQLHPVGFVELRPPAHSL*AAFPNS
Trigger: AGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGG...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR CCA 90 bp CACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTGAAGGCTCTTGTCTATaGACCACCTTCCCATTGTGT +
Preference number: 2 (lower is better)
Translates to: HTGLWRCSHYSAAPSSWLEGSCL*TTFPLC
Trigger: ACACAATGGGAAGGTGGTCCATAGACAAGAGCCTTC...AAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR CAA 90 bp ATGGGTTGGTCGGCACACTGGCTCTGCAATAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGGAGAGAAGGCTTCCAAGAAGATATG +
Preference number: 2 (lower is better)
Translates to: MGWSAHWLCNSHQEV*GIFVNWREGFQEDM
Trigger: CATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CAA 90 bp AAATTTGAGGGGAACACACACAATTCAGTCCCCAGCACACTCACTTaGGGCTGCATTTCCAAATTCTCCCTGGCTACAATGGGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: KFEGNTHNSVPSTLT*GCISKFSLATMGLN
Trigger: ATTCAGGCCCATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTGTGTGTTCCCCTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR TCA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACAGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 2 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp GAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCACAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 2 (lower is better)
Translates to: ETAELPSTRQRFLTVHAAQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...TGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 2 (lower is better)
Translates to: VFLLHASEFRDHLEAITLLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAACACTCACTTTGGGCTaGATTTCCAAATTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVTLTLG*ISKFSL
Trigger: CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGT...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAACAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 2 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQIRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 2 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AATGGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCCCAGCACACTCACTTTaGGCTGCATTTCCAAATTCT +
Preference number: 2 (lower is better)
Translates to: NGRFACESLCDELSGLPFPAHSL*AAFPNS
Trigger: AGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGG...GAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CAA 90 bp GTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: VHNLINCIIPSGTPV*LSFLRYSVMSLVCS
Trigger: GCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR TCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR TCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp TCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: SENLNPQFCHLRGRGSQSGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...TGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 2 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 2 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGAATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 2 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACACAGGCTGACAACATaGAGCACCTATGCCTATTGT +
Preference number: 2 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQHRLTT*STYAYC
Trigger: ACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTG...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR CCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 2 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR-3UTR CCA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 2 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 2 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp AACTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: NLIRNWQALNLLGFMVYSSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 90 bp AGACACTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTACC +
Preference number: 2 (lower is better)
Translates to: RHCLCLFFFFFILVH*LIEVKQVHGDVRFT
Trigger: GGTAAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTCACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 2 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR GCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGACTCATGTCATGCTCTaGTCAAATCCCTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLTHVML*SNPSDG
Trigger: GCCATCTGAGGGATTTGAGCAGAGCATGACATGAGT...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR-3UTR CCA 90 bp TTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: FLNHFLLDFKRHCLCLFFSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTCTGGAGAATTTGCATCCTTTCCCCC +
Preference number: 2 (lower is better)
Translates to: SNEVSPTLDMKMVLI*GLCLKFWRICILSP
Trigger: GGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGTTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 2 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CCA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 2 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
3UTR-3UTR GCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 2 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR TCA 90 bp TTCAACGAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACTTTGAAGACAAAATTTaGGGGGAACACACACAATTC +
Preference number: 2 (lower is better)
Translates to: FNEVSVVLQDQLDFSIADFEDKI*GEHTQF
Trigger: GAATTGTGTGTGTTCCCCTCAAATTTTGTCTTCAAA...GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR TCA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGTTTGAAGACAAAATTTaGGGGGAACACACACAATTC +
Preference number: 2 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTFEDKI*GEHTQF
Trigger: GAATTGTGTGTGTTCCCCTCAAATTTTGTCTTCAAA...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR-3UTR CCA 90 bp AACTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 2 (lower is better)
Translates to: NLIRNWQALNLLGFMVYSNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...GCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 3 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 72 bp CGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGTCGTCAATGGTGGACC +
Preference number: 3 (lower is better)
Translates to: RSSRWACPWHRR*TGRSGCRQWWT
Trigger: GGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp AGAAGATATGGCCATCGGGAGCCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCAGCGGCATTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: RRYGHREPPRGA*RCGRPSAAFAA
Trigger: GGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCCGATGGCCATATCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 3 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 72 bp CGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACACAGTGTCGTCGGCCCC +
Preference number: 3 (lower is better)
Translates to: RVYMFAGRLAPR*VVLHVHSVVGP
Trigger: GGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CCA 72 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCC +
Preference number: 3 (lower is better)
Translates to: VCTSSRIMRPHS*VLSHSMTRSAS
Trigger: GGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 3 (lower is better)
Translates to: AADGLVLGIGGEPADLAVTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...GACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp GCAGCCTGTAGTCCTTGGCTCCATATTCATCCACTTTaGTGCCTGACTCATCCACCTGCTTCCCCGCCGCCG +
Preference number: 3 (lower is better)
Translates to: AACSPWLHIHPL*CLTHPPASPPP
Trigger: CGGCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp AGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCAGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: RAGVHVCWAPCSAMSGTPGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...TGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 3 (lower is better)
Translates to: SSRTRVAVKPSLQWACTMTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 3 (lower is better)
Translates to: GGVAQHGVGANGNGAADGPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 3 (lower is better)
Translates to: APQGRTMTPERARPFPNISGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACTTCCTGGATTTCTTCTaGTCTGCGCCGCCGCAAACT +
Preference number: 3 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHFLDFF*SAPPQT
Trigger: AGTTTGCGGCGGCGCAGACAAGAAGAAATCCAGGAA...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445889.5
3UTR GCA 72 bp ACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTTCGGAACATCTTGGCT +
Preference number: 3 (lower is better)
Translates to: TRVAVKPSLQWA*TMVSTLRNILA
Trigger: AGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR CCA 72 bp TGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTGTCGTCGGCCCCAGAC +
Preference number: 3 (lower is better)
Translates to: CTCLLGALLRDE*YSMYTVSSAPD
Trigger: GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: GSVTREVEGPPLLSAVLEVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...TTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCATGGACCACCTTCCCATaGTGTACTCACATGACAAGA +
Preference number: 3 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPWTTFP*CTHMTR
Trigger: TCTTGTCATGTGAGTACACAATGGGAAGGTGGTCCA...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR TCA 72 bp CAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCCCGTTTCCAAACATCT +
Preference number: 3 (lower is better)
Translates to: QPGTFQHRREEQ*PPNVHARFQTS
Trigger: AGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 72 bp CAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCTCACCGCTTCT +
Preference number: 3 (lower is better)
Translates to: QSNPAYSGPARW*APFGTSWLTAS
Trigger: AGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR GCA 72 bp GTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAGGGACTTTCCAGCACC +
Preference number: 3 (lower is better)
Translates to: VAQHQTAFSDSA*SSHTNQGLSST
Trigger: GGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp GGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGACCACATCTTGAACTGG +
Preference number: 3 (lower is better)
Translates to: GLSLASEVNRQI*LSSMVDHILNW
Trigger: CCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 3 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 3 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 3 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCTGCATCCCGCAGGCGTaGCGCCCCTCACCCGTCTCC +
Preference number: 3 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVCIPQA*RPSPVS
Trigger: GGAGACGGGTGAGGGGCGCAACGCCTGCGGGATGCA...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445889.5
3UTR TCA 72 bp CAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCTGGTATGGTGT +
Preference number: 3 (lower is better)
Translates to: QSNPAYSGPARW*APFGTSWLVWC
Trigger: ACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 72 bp CCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATaGGATCTGAATGAGGACATTTGCTTCCGGCAGATC +
Preference number: 3 (lower is better)
Translates to: PLGFLTPGATMG*DLNEDICFRQI
Trigger: GATCTGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR GCA 72 bp TCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTaGACGCCCGTTTCCAAACATCTTTCGCAAGCTCTT +
Preference number: 3 (lower is better)
Translates to: SSTAGKNNDPRT*TPVSKHLSQAL
Trigger: AAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp GTCAAACAGGTCCATGGGGATGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGTGGAGGGCCCACCACT +
Preference number: 3 (lower is better)
Translates to: VKQVHGDVRFTL*ICHSGSGGPTT
Trigger: AGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 3 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp TTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 3 (lower is better)
Translates to: LNWAFHCSTETAELPSTRSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...TCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 3 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 3 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR TCA 72 bp GGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTaGACTGGGCTTTCCACTGCTCCACAGAAACAGCTG +
Preference number: 3 (lower is better)
Translates to: GRSGCRQWWTTS*TGLSTAPQKQL
Trigger: CAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR GCA 72 bp CACCCTTCGGAACATCTTGGCTCACCGCTTCTGTCTTaGTTCCTTCAGTCTATTTCCAGCACAGCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: HPSEHLGSPLLS*FLQSISSTAAR
Trigger: CCTGGCTGCTGTGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR CCA 72 bp CTCATGAGAAGCATGGCCTCACCCAGAACACAATGCTaGATCCAGAGTGTAGCGGCTGGGGTAATCAGTCGT +
Preference number: 3 (lower is better)
Translates to: LMRSMASPRTQC*IQSVAAGVISR
Trigger: ACGACTGATTACCCCAGCCGCTACACTCTGGATCCAGCATTGTGTTCTGGGTGAGGCCATGCTTCTCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: VFLLHASEFRDHLEAITLGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 3 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 3 (lower is better)
Translates to: VLMATEQPMGLSLASEVNSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
3UTR-3UTR CAA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 3 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCCCAGCACACTCACTTaGGGCTGCATTTCCAAATTC +
Preference number: 3 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSPSTLT*GCISKF
Trigger: GAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGG...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR TCA 72 bp CCTGACGCCTGGAGCCACCATGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCAGATCAAACGAAGTGT +
Preference number: 3 (lower is better)
Translates to: PDAWSHHGMRSE*GHLLPADQTKC
Trigger: ACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR GCA 72 bp AAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGGCAACTTTCAACGAAG +
Preference number: 3 (lower is better)
Translates to: KRHSRITGSWRR*WITSGWQLSTK
Trigger: CTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR GCA 72 bp TCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAGTTGCCCAGCACCAGA +
Preference number: 3 (lower is better)
Translates to: SMVDHILNWAFH*STETAELPSTR
Trigger: TCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp GGTCGTCCTTCAGCGGCATTTGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTTTGGTGCCTGACTCAT +
Preference number: 3 (lower is better)
Translates to: GRPSAAFAACSP*LHIHPLWCLTH
Trigger: ATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGACGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 3 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 3 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 3 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp AACTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 3 (lower is better)
Translates to: NLIRNWQALNLLGFMVYSPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...GCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR TCA 72 bp TGGGGTAATCAGTCGTTATGCTCCCCACAGGAAATCTaGATGGCACATTCTCATGGCTGCCACAGGCTGACA +
Preference number: 3 (lower is better)
Translates to: WGNQSLCSPQEI*MAHSHGCHRLT
Trigger: TGTCAGCCTGTGGCAGCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGAGCATAACGACTGATTACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR GCA 72 bp ACACACAATTCAGTCCCCAGCACACTCACTTTGGGCTaGATTTCCAAATTCTCCCTGGCTACAATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: THNSVPSTLTLG*ISKFSLATMGL
Trigger: CAGGCCCATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CCA 72 bp CGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAACTTTCAACGAAGTAT +
Preference number: 3 (lower is better)
Translates to: RHSRITGSWRRC*ITSGWQLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
3UTR CCA 72 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACATCAGGGTGGCAACTT +
Preference number: 3 (lower is better)
Translates to: EFLKRHSRITGS*RRCWITSGWQL
Trigger: AAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CCA 72 bp CTTCATCATCCTCTTCATCCTCATAGTGCCGCTTCCTaGATTTCTTCTTGTCTGCGCCGCCGCAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: LHHPLHPHSAAS*ISSCLRRRKLL
Trigger: TAGGAGTTTGCGGCGGCGCAGACAAGAAGAAATCCAGGAAGCGGCACTATGAGGATGAAGAGGATGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445889.5
3UTR-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQIVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp ATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 3 (lower is better)
Translates to: MGLSLASEVNRQIWLSSMSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...CATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCCTCACCGCTTCTGTCTaGCTTCCTTCAGTCTATTTC +
Preference number: 3 (lower is better)
Translates to: DVAIILQLHPVGFVELRPLTASV*LPSVYF
Trigger: GAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAG...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR GCA 72 bp GTACTCATGCACATGGGTTGGTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTCTTGGGCATATTTGTA +
Preference number: 3 (lower is better)
Translates to: VLMHMGWSAHWL*NSHQEVLGIFV
Trigger: TACAAATATGCCCAAGACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CCA 72 bp GGAACACACACAATTCAGTCCCCAGCACACTCACTTTaGGCTGCATTTCCAAATTCTCCCTGGCTACAATGG +
Preference number: 3 (lower is better)
Translates to: GTHTIQSPAHSL*AAFPNSPWLQW
Trigger: CCATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTGTGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CAA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 3 (lower is better)
Translates to: EFLKRHSRITGSWRRCWISTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CAA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 3 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CCA 72 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTATCTGTTGTGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: TGSWRRCWITSG*QLSTKYLLCFK
Trigger: CTTGAAGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 3 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp CACGATGGTGAGCACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 3 (lower is better)
Translates to: HDGEHPSEHLGWYGVHFIFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 3 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGAFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCATTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 3 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR TCA 72 bp ATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGTGTCCTGGGATACCAG +
Preference number: 3 (lower is better)
Translates to: ITLIYQESLPLG*VSHFLCVLGYQ
Trigger: CTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
3UTR CCA 72 bp CCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCTGTGGATCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: PCPFAHRSQTGP*GCQIYPVDLSL
Trigger: GAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 3 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
3UTR-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 3 (lower is better)
Translates to: VFLLHASEFRDHLEAITLSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 3 (lower is better)
Translates to: VFLLHASEFRDHLEAITLFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR TCA 72 bp AAATCTGAATGGCACATTCTCATGGCTGCCACAGGCTaGCAACATGGAGCACCTATGCCTATTGTTACATTA +
Preference number: 3 (lower is better)
Translates to: KSEWHILMAATG*QHGAPMPIVTL
Trigger: TAATGTAACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGCCATTCAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR-3UTR CAA 90 bp TGGAGTTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 3 (lower is better)
Translates to: WSSSIISCLTSKDTVCVSSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...AGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR-3UTR CAA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTATTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 3 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 3 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp AACTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 3 (lower is better)
Translates to: NLIRNWQALNLLGFMVYSQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...GCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 3 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR-3UTR CAA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 3 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCCCTGTCCCAACGGGGTaGGCGCGGGAGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVPVPTG*AREGQQ
Trigger: CTGCTGGCCCTCCCGCGCGCACCCCGTTGGGACAGG...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR GCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCACCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPPSSLG*AQVQHL
Trigger: GAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGG...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR TCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATGCATCCCGCAGGCGTTaGGCCCCTCACCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LGIGGEPADLAVVNGGPHASRRR*APHPSP
Trigger: GGGAGACGGGTGAGGGGCGCAACGCCTGCGGGATGC...ATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS-3UTR CCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGCCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: PLLGLEPLHDSLGLPGPFSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...AAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: EAPLLGLEPLHDSLGLPGPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...TCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTCCATATTCATCCACTTTGGTGCCTGACTCATCCACCTGCTTCCCCGCCGCCGCCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LHIHPLWCLTHPPASPPPPSSLG*AQVQHL
Trigger: GAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGG...CGGCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCGGCAAGGGCAGTCGTaGCTGAGCGTGCCCGCGCAA +
Preference number: 4 (lower is better)
Translates to: GMVCTSSRIMRPHSWVLSRQGQS*LSVPAQ
Trigger: TTGCGCGGGCACGCTCAGCCACGACTGCCCTTGCCG...GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR TCA 90 bp GCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLRDEWYSMYTVSSAPDPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: STAGKNNDPRTCTPVSKHPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAACCTGTCCCAACGGGGTaGGCGCGGGAGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HGVLEKMLDYIRVATFNEPVPTG*AREGQQ
Trigger: CTGCTGGCCCTCCCGCGCGCACCCCGTTGGGACAGG...TTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCACTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: PLLGLEPLHDSLGLPGPFGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...AAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 72 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLS*ASEVNRQIWLS
Trigger: CGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 72 bp ACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGCTCGGCCTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TSSRIMRPHSWV*SHSMTRSASQD
Trigger: GTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: LWICHSGSGGPTTAFSSLRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...AAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGAAAGGGCAGTCGTGGCTaGGCGTGCCCGCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRKGSRG*ACPRNV
Trigger: GACGTTGCGCGGGCACGCTCAGCCACGACTGCCCTT...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR GCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: ALLRDEWYSMYTVSSAPDVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: QDHEAPLLGLEPLHDSLGGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...GCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCAGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: RAGVHVCWAPCSAMSGTPGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...TGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EAPLLGLEPLHDSLGLPGQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...TCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGACGGCAAGGGCAGTCGTaGCTGAGCGTGCCCGCGCAA +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRRQGQS*LSVPAQ
Trigger: TTGCGCGGGCACGCTCAGCCACGACTGCCCTTGCCG...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR TCA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: MVCTSSRIMRPHSWVLSHGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...GTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTAAGGGCAGTCGTGGCTaGGCGTGCCCGCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: EFLKRHSRITGSWRRCWIKGSRG*ACPRNV
Trigger: GACGTTGCGCGGGCACGCTCAGCCACGACTGCCCTT...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR GCA 90 bp GCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: AADGLVLGIGGEPADLAVPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...GACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCACAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMNWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: APQGRTMTPERARPFPNIVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCACAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TRDFPAPQGRTMTPERARKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...GCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: AGVHVCWAPCSAMSGTPCAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...ACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCCTAGGCCGAGTTCGCTaGGCTGCGCCCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DVAIILQLHPVGFVELRPLGRVR*AAPRSS
Trigger: GCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAG...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR TCA 90 bp ATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: ILNWAFHCSTETAELPSTRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...GGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CACGATGGTGAGCACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: HDGEHPSEHLGWYGVHFISLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGSGGPTTAFSSLRNGRFPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...AAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ADLLVKVSVMSSVASPSEPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...CTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: SHSMTRSASQDLLVVWPSFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...GCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRGLFCP*QLQQQR
Trigger: TCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACC...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGAAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: EAPLLGLEPLHDSLGLPGSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...TCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCATGCCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: HSMTRSASQDLLVVWPSMPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGAAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: EAPLLGLEPLHDSLGLPGRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...TCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: ASPSEFLKRHSRITGSWRGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...TCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: LKSGCTCLLGALLRDEWYGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: VNGGPHLELGFPLLHRNSRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...GCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TVSSAPDIELMVPKRRDAWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACGATGGTGAGCACCCTTCGGAACATCTTGGCTCACCGCTTCTGTCTTGCTTCCCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TMVSTLRNILAHRFCLASLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...GGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR TCA 90 bp TTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGAGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: LNWAFHCSTETAELPSTRGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...TCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCCCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AADGLVLGIGGEPADLAVPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...GACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLLGLEPLHDSLGLPGPFSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...AAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLERLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LKSGCTCLLGALLRDEWYAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: APQGRTMTPERARPFPNITLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RAGVHVCWAPCSAMSGTPSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...TGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: AGVHVCWAPCSAMSGTPCSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...ACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: SHSMTRSASQDLLVVWPSLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...GCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSSSRTRVAVKPSLQWACGLFCP*QLQQQR
Trigger: TCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACC...GCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AADGLVLGIGGEPADLAVSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: LSSSRTRVAVKPSLQWACRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...GCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: MSDLPCGSVTREVEGPPLPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...CAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACCCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATCTAGGCCGAGTTCGCTaGGCTGCGCCCAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNLGRVR*AAPRSS
Trigger: GCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAG...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CAA 72 bp CGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: RLKSGCTCLLGA*LRDEWYSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCAATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PADLAVVNGGPHLELGFPIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCATTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACCCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LKSGCTCLLGALLRDEWYPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAACTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ASEVNRQIWLSSMVDHILWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...CAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGCCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLSLASEVNGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: ALLRDEWYSMYTVSSAPDFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: LWICHSGSGGPTTAFSSLQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...AAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: PSGTPVLLSFLRYSVMSLSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...CAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR GCA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPTFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp ATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACGCACATTCTCATGGCTaGCACAGGCTGACAACATGG +
Preference number: 4 (lower is better)
Translates to: MVCTSSRIMRPHSWVLSHAHSHG*HRLTTW
Trigger: CCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGC...GTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPGLFCP*QLQQQR
Trigger: TCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACC...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGTTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPLYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CACGATGGTGAGCACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: HDGEHPSEHLGWYGVHFIPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGACCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCCCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: TVSSAPDIELMVPKRRDAPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FPKALEERVYMFAGRLAPMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: SDHGVLEKMLDYIRVATFAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...GAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACAAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 72 bp CATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: HFLKRLKSGCTC*LGALLRDEWYS
Trigger: GGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 72 bp TGGGCCTGCACGATGGTGAGCACCCTTCGGAACATCTaGGCTCACCGCTTCTGTCTTGCTTCCTTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: WACTMVSTLRNI*AHRFCLASFSL
Trigger: TAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR TCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DGLVLGIGGEPADLAVVNSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...ATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCAAGGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GRTMTPERARPFPNIFRKAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...CTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCATGGCTGCCACAGGCTaGCAACATGGAGCACCTATG +
Preference number: 4 (lower is better)
Translates to: PSEFLKRHSRITGSWRRCMAATG*QHGAPM
Trigger: CATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCAT...GCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: PSGTPVLLSFLRYSVMSLQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...CAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR GCA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTNWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCTCATGAGAAGCATGGCCTCACCCAGAACACAATGCTGGATCCAGAGTGTAGCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: AHEKHGLTQNTMLDPECSSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...GCTACACTCTGGATCCAGCATTGTGTTCTGGGTGAGGCCATGCTTCTCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR GCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGACATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: ASPSEFLKRHSRITGSWRHSAAS*ISSCRG
Trigger: ACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATG...TCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGAGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKLYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: MSDLPCGSVTREVEGPPLRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...CAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGALSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTCCATATTCATCCACTTTGGTGCCTGACTCATCCACCTGCTTCCCCGCCGCCGGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHIHPLWCLTHPPASPPPVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...CGGCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp ATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ILGSRGPGEDAGLHQGGNVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...GTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: STILSSSRTRVAVKPSLQMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...CTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: HPSEHLGWYGVHFIQDHEMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...CTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTVHAAVTPTRDFPAPQGTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...TCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: TLWICHSGSGGPTTAFSSSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...ACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: TVSSAPDIELMVPKRRDASEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCTCCGGTGTCTCTTCTTAGGAGGACACTAATCATAGCGGATCACGACCTCATTGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: APVSLLRRTLIIADHDLIGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...AATGAGGTCGTGATCCGCTATGATTAGTGTCCTCCTAAGAAGAGACACCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCGGTGTACATGTTTGCTaGGCGCCTTGCTCCGCGATG +
Preference number: 4 (lower is better)
Translates to: VNGGPHLELGFPLLHRNSGVHVC*APCSAM
Trigger: CATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC...GCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGAGGCAGGTGGAATTGCTaGTCTCAGCTGTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRGRWNC*SQLSLA
Trigger: GGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCC...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CAA 72 bp GCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGCTGCATACAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: AELPEVLGDVTG*QPNADSCIQGV
Trigger: TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CAA 72 bp CGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTaGAACTGGGCTTTCCACTGCTCCACAGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: RQIWLSSMVDHI*NWAFHCSTETA
Trigger: AGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 72 bp GCACCCTTCGGAACATCTTGGCTCACCGCTTCTGTCTaGCTTCCTTCAGTCTATTTCCAGCACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: APFGTSWLTASV*LPSVYFQHSSQ
Trigger: CTGGCTGCTGTGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAAGATGTTCCGAAGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR TCA 90 bp TCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: STILSSSRTRVAVKPSLQIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...CTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGTGGTGTGGCCCAGCATGGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGCAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: GGVAQHGVGANGNGAADGQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...CCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ETAELPSTRQRFLTVHAAPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...TGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SEFLKRHSRITGSWRRCWSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...CCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGACCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAACACAATGCTGGATCCAGAGTGTAGCGGCTCATGAGAAGCATGGCCTCACCCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RTQCWIQSVAAHEKHGLTPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...GGTGAGGCCATGCTTCTCATGAGCCGCTACACTCTGGATCCAGCATTGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: PSEFLKRHSRITGSWRRCQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...GCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLSLASEVNLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: DVAIILQLHPVGFVELRPPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGACCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: ASEVNRQIWLSSMVDHILAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...CAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: FLLHASEFRDHLEAITLIRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: EFLKRHSRITGSWRRCWIGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCACTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HTGLWRCSHYSAAPSSWLLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...AAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGATTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: LNWAFHCSTETAELPSTRLYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...TCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: ILGSRGPGEDAGLHQGGNRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...GTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: SDHGVLEKMLDYIRVATFRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...GAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp ACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: TVSSAPDIELMVPKRRDASQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...GGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SGSGGPTTAFSSLRNGRFVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...AAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATCCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: MSDLPCGSVTREVEGPPLPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...CAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: STILSSSRTRVAVKPSLQMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...CTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ADLLVKVSVMSSVASPSEMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...CTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTCACAGGCTGACAACATaGAGCACCTATGCCTATTGT +
Preference number: 4 (lower is better)
Translates to: LWICHSGSGGPTTAFSSLHRLTT*STYAYC
Trigger: ACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTG...AAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp TCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGCCCAGAACACAATGCTaGATCCAGAGTGTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SEFLKRHSRITGSWRRCWPRTQC*IQSVAA
Trigger: AGCCGCTACACTCTGGATCCAGCATTGTGTTCTGGG...CCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp TCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACCCAGAACACAATGCTaGATCCAGAGTGTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SEHLGWYGVHFIQDHEAPPRTQC*IQSVAA
Trigger: AGCCGCTACACTCTGGATCCAGCATTGTGTTCTGGG...TGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR CAA 72 bp AACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGTTTTCTGACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: NWAFHCSTETAE*PSTRQRFLTVH
Trigger: ATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
3UTR CAA 72 bp CGAAGTACCCTGCCTAAGCATCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: RSTLPKHHFLKR*KSGCTCLLGAL
Trigger: CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAGGGTACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ADLLVKVSVMSSVASPSEFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...CTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGCCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QTGPWGCQIYPVDLSLGKPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...CTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCAAGGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GRTMTPERARPFPNIFRKGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...CTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGCCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAATCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HGVLEKMLDYIRVATFNESAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...TTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGAPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLSLASEVNTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR GCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp ACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAGTCTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: TAELPSTRQRFLTVHAAVFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...GACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: SGSGGPTTAFSSLRNGRFQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...AAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ETAELPSTRQRFLTVHAANWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...TGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCATTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: PADLAVVNGGPHLELGFPLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLELAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGTTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGCTTGCCTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLLALIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAG...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR GCA 90 bp TCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATCACCCAGAACACAATaGTGGATCCAGAGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: SPSEFLKRHSRITGSWRRSPRTQ*WIQSVA
Trigger: CGCTACACTCTGGATCCAGCATTGTGTTCTGGGTGA...TCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp CACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HGVLEKMLDYIRVATFNEGLFCP*QLQQQR
Trigger: TCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACC...TTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp CACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HPSEHLGWYGVHFIQDHEGLFCP*QLQQQR
Trigger: TCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACC...CTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ALLRDEWYSMYTVSSAPDGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGTACACAAATGACAAGAAGGGCAGGTGAGAGAAAGCATGCTCCGGTGTCTCTTCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: STQMTRRAGERKHAPVSLLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...AAGAGACACCGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTCATTTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: GLSTAPQKQLSCPAPDSVSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCAACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PADLAVVNGGPHLELGFPTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PMGLSLASEVNRQIWLSSVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...TGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WAPCSAMSGTPCTQCRRPLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...GGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCAAGCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRTMTPERARPFPNIFRKQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...CTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCGCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVAPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGC...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644317.1
CDS-3UTR CCA 90 bp CACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTGGCAGGTGGAATTGCTaGTCTCAGCTGTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: HTGLWRCSHYSAAPSSWLGRWNC*SQLSLA
Trigger: GGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCC...AAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp GGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCCAGCACACTCACTTTaGGCTGCATTTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: GMVCTSSRIMRPHSWVLSPAHSL*AAFPNS
Trigger: AGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGG...GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGATTTTCTCAGAGCTGTaGAGGCTGAAAGTCTATGAT +
Preference number: 4 (lower is better)
Translates to: SSRTRVAVKPSLQWACTMIFSEL*RLKVYD
Trigger: ATCATAGACTTTCAGCCTCCACAGCTCTGAGAAAAT...CATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR TCA 90 bp AATGGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NGRFACESLCDELSGLPFFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...GAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLSLASEVNQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGACAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: GVGANGNGAADGLVLGIGQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...TCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTCCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: HGVLEKMLDYIRVATFNEGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...TTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: TGSWRRCWITSGWQLSTKGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...CTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTCAACGAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: FNEVSVVLQDQLDFSIADSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
CDS-3UTR TCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DVAIILQLHPVGFVELRPSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTTCCCCACAGGAAATCTaGATGGCACATTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: EFLKRHSRITGSWRRCWISPQEI*MAHSHG
Trigger: GCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGA...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGCCTGACTCATCCACCTaGTTCCCCGCCGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLPDSST*FPAAEG
Trigger: TCCCTCGGCGGCGGGGAAGCAGGTGGATGAGTCAGG...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: DGLVLGIGGEPADLAVVNTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...ATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR GCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp ATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: ILGSRGPGEDAGLHQGGNFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...GTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCATTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGNWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: VLMATEQPMGLSLASEVNCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: APQGRTMTPERARPFPNITFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCAACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RAGVHVCWAPCSAMSGTPTFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...TGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAGCGGGTGTACATGTTTaGTGGGCGCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HGVQQDSFLGFDCHIFPVAGVHV*WAPCSA
Trigger: CGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC...TACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGCCTTTCCAACAAGGGTaGCAAGCGCCGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLPFQQG*QAPVLN
Trigger: GTTCAAGACCGGCGCTTGGCACCCTTGTTGGAAAGG...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CACAATTCAGTCCCCAGCACACTCACTTTGGGCTGCATTTCCAAATTCTCCCTGCAGGGCAGGTGGAATTaGTGGTCTCAGCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: HNSVPSTLTLGCISKFSLQGRWN*WSQLSL
Trigger: AAGTGACAGCTGAGACCAGCAATTCCACCTGCCCTG...CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATACATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIHSAAS*ISSCRG
Trigger: ACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATG...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATACCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHIPPRGA*RCGRPS
Trigger: TGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGG...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GSWRRCWITSGWQLSTKYASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ILGSRGPGEDAGLHQGGNSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GPGEDAGLHQGGNFQRSIVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...GATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETAELPSTRQRFLTVHAATSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...TGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGALLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATATTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAILLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVLLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGCACCAGACCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPAPDLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGGTCTGGTGC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645736.1
CDS-3UTR CCA 90 bp AAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCATAGGGCACCAGACCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: KHHFLKRLKSGCTCLLGAIGHQT*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGGTCTGGTGCCCTAT...GGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645736.1
CDS-3UTR TCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGCGCAGGGAAGAACAATaGCCCCCGAACGTGCACGCC +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLRREEQ*PPNVHA
Trigger: GGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCG...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTTGGGCTGCATTTCCAAATTCTCCCTGGCTACAATGGGCCTGAATTAGTAGCCTGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FGLHFQILPGYNGPELVAWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...GGCTACTAATTCAGGCCCATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR TCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AATGGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: NGRFACESLCDELSGLPFGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...GAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: VFLLHASEFRDHLEAITLGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCAGCCTTTGGGCTTCCTaGCGCCTGGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: FLNHFLLDFKRHCLCLFFSLWAS*RLEPPW
Trigger: CCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCT...GAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACAGCAGCCAGGGCAGTATTTTTACAGTGTAAAGTCAACTCATGTCATGCTCTGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: TAARAVFLQCKVNSCHALRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...CAGAGCATGACATGAGTTGACTTTACACTGTAAAAATACTGCCCTGGCTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR TCA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTTTTGCAGCCCAACGCTaGCAGCACCCAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSFAAQR*QHPEGP
Trigger: AGGCCCCTCTGGGTGCTGTCAGCGTTGGGCTGCAAA...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644317.1
CDS-3UTR GCA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: STILSSSRTRVAVKPSLQVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...CTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGCCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGCACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SSAPDIELMVPKRRDAWLHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...CAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR GCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR GCA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: FLLHASEFRDHLEAITLIQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp ACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCTTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TRDFPAPQGRTMTPERARFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...GCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: LGIGGEPADLAVVNGGPHCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...ATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTGCTGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: EDAGLHQGGNFQRSICCAVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...AGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAAGACCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIRPGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGGTCT...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645736.1
CDS-3UTR GCA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGCACACTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMHTGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGTGTG...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CCA 90 bp GGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GMVCTSSRIMRPHSWVLSGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAAGTCAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCTTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RSQTGPWGCQIYPVDLSLLYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...GAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTTGGGCTGCATTTCCAAATTCTCCCTGGCTACAATGGGCCTGAATTAGTAGCCTTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: FGLHFQILPGYNGPELVALYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...GGCTACTAATTCAGGCCCATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp ATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: MVCTSSRIMRPHSWVLSHWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...GTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGATCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGSWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTACCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: HGVQQDSFLGFDCHIFPVPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...TACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGATCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: LKSGCTCLLGALLRDEWYICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: DQKLASSKFVGVHGVQQDGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...ATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATAGGGCTTCCTGACGCCTaGAGCCACCATGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHIGLPDA*SHHGMR
Trigger: TCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCC...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCCAGATGGCTTCACACTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGQMASH*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGTGTGAAGCCATCTG...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAGAAGGCTCTTGTCTATaGACCACCTTCCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQREGSCL*TTFPLC
Trigger: ACACAATGGGAAGGTGGTCCATAGACAAGAGCCTTC...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
3UTR CAA 72 bp GGGAACACACACAATTCAGTCCCCAGCACACTCACTTaGGGCTGCATTTCCAAATTCTCCCTGGCTACAATG +
Preference number: 4 (lower is better)
Translates to: GNTHNSVPSTLT*GCISKFSLATM
Trigger: CATTGTAGCCAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTGTGTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
3UTR CAA 72 bp TCTGGTGAAGGCTCTTGTCTATGGACCACCTTCCCATaGTGTACTCACATGACAAGAAGGGCAGGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SGEGSCLWTTFP*CTHMTRRAGER
Trigger: TCTCTCACCTGCCCTTCTTGTCATGTGAGTACACAATGGGAAGGTGGTCCATAGACAAGAGCCTTCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR TCA 90 bp TGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WRRCWITSGWQLSTKYLLIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAATTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTACCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAATGGTGGACCACATCTTaGACTGGGCTTTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEWWTTS*TGLSTA
Trigger: AGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCA...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KRSVTYLGYEDGVNFGVVPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...CACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCCTTGGCATCGGAGGTaGACCGGCAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFPWHRR*TGRSGC
Trigger: ACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGG...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTACTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HGVQQDSFLGFDCHIFPVLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...TACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCT +
Preference number: 4 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTGPARW*APFGTS
Trigger: AGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCC...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLESFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCACCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: TGSWRRCWITSGWQLSTKVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...CTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCTCTCTGCCGCTTGGTTaGGTAAGCCATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSSLPLG*VSHFLC
Trigger: ACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGA...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
CDS-3UTR TCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTGCTATGGCTGCCACAGGCTaGCAACATGGAGCACCTATG +
Preference number: 4 (lower is better)
Translates to: EDAGLHQGGNFQRSICCAMAATG*QHGAPM
Trigger: CATAGGTGCTCCATGTTGTCAGCCTGTGGCAGCCAT...AGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR TCA 90 bp GGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTTGAAGACAAAATTTaGGGGGAACACACACAATTC +
Preference number: 4 (lower is better)
Translates to: GLSTAPQKQLSCPAPDSVFEDKI*GEHTQF
Trigger: GAATTGTGTGTGTTCCCCTCAAATTTTGTCTTCAAA...AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR TCA 90 bp CACAATTCAGTCCCCAGCACACTCACTTTGGGCTGCATTTCCAAATTCTCCCTGCTGACAGTACACAAATaGCAAGAAGGGCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HNSVPSTLTLGCISKFSLLTVHK*QEGQVR
Trigger: TCTCACCTGCCCTTCTTGTCATTTGTGTACTGTCAG...CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR GCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSSAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FACESLCDELSGLPFRVSNWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...AGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGAGTAGGTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGATTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GVGANGNGAADGLVLGIGFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...TCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCACCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTTTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AGVHVCWAPCSAMSGTPCFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...ACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAGTTTGCTGGGCGCCTTaGTCCGCGATGAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SENLNPQFCHLRGRGSQSVCWAP*SAMSGT
Trigger: AGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAAC...TGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACAGGGCAGGTGGAATTaGTGGTCTCAGCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQQGRWN*WSQLSL
Trigger: AAGTGACAGCTGAGACCAGCAATTCCACCTGCCCTG...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR GCA 90 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGACACTCACTTTGGGCTaGATTTCCAAATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TGSWRRCWITSGWQLSTKTLTLG*ISKFSL
Trigger: CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGT...CTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACACTCACTTTGGGCTaGATTTCCAAATTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAITLTLG*ISKFSL
Trigger: CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGT...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: WRRCWITSGWQLSTKYLLASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAATTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYELYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGTTTTCTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RFLTVHAAVTPTRDFPAPWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...CGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTACGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTCTGTCACTCGGGAAGTaGAGGGCCCACCACTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFLSLGK*RAHHCF
Trigger: AAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAG...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSQRSSR*ACPWHR
Trigger: CCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCACCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: SENLNPQFCHLRGRGSQSPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...TGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGCCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTCAGCACACTGGACTTTGGCGATGTAGCCATTATTCTGCAGCTCCATCCAGTTTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: LSTLDFGDVAIILQLHPVSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...AACTGGATGGAGCTGCAGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: PQGRTMTPERARPFPNIFICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACAATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STAGKNNDPRTCTPVSKHLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: EFLKRHSRITGSWRRCWIRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATAGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHIAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: KSCCCSSFVENAKSSSSMLLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...CATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 72 bp TCGGCACACTGGCTCTGCAATAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGGAGAGAAGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SAHWLCNSHQEV*GIFVNWREGFQ
Trigger: TTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR TCA 90 bp GCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: AFHCSTETAELPSTRQRFQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...AAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTCATCCAGGATCATaGGGCCCCACTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFLHPGS*GPTPGS
Trigger: AGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAG...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCATCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: SEHLGWYGVHFIQDHEAPSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...TGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGCGCCTTGCTCCGCGATaGGTGGTACTCCATGTACAC +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLRLAPR*VVLHVH
Trigger: GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCG...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGCACAGCCAAGCCCTTaGTGCATCTTCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPAQPSP*CIFLST
Trigger: TGTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGC...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTCAACGAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACGACAAGAAGGGCAGGTaGGAGAAAGCATGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: FNEVSVVLQDQLDFSIADDKKGR*EKACSG
Trigger: ACCGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTC...GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR TCA 90 bp GAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACAGACAAGAAGGGCAGGTaGGAGAAAGCATGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EVSVVLQDQLDFSIADSTDKKGR*EKACSG
Trigger: ACCGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTC...TGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTCGGCACACTGGCTCTaGAATAGCCACCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQISAHWL*NSHQEV
Trigger: GACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGA...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: FACESLCDELSGLPFRVSVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...AGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: FLLHASEFRDHLEAITLIVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR GCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAAGTCAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCTTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: RSQTGPWGCQIYPVDLSLFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...GAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYENWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PSEFLKRHSRITGSWRRCTFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...GCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGCATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVHSAAS*ISSCRG
Trigger: ACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATG...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGATATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTAGGGGCCTGGAGGTGTaGTCGTCCTTCAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: RYRVCSVEWHIPLGQTHCRGLEV*SSFSGI
Trigger: AATGCCGCTGAAGGACGACCACACCTCCAGGCCCCT...ACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAAATTCCAGACTGGGTGGCTTCAACATTAGAACTGTATTTTCTCAGAGCTGTGCTCATGCACATGGGTTaGTCGGCACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KIPDWVASTLELYFLRAVLMHMG*SAHWLC
Trigger: GCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAG...CACAGCTCTGAGAAAATACAGTTCTAATGTTGAAGCCACCCAGTCTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTTTGTACTCATGCACATaGGTTGGTCGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLLYSCT*VGRHTG
Trigger: GCCAGTGTGCCGACCAACCCATGTGCATGAGTACAA...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTTCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: PSEFLKRHSRITGSWRRCWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...GCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACAGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EVSVVLQDQLDFSIADSTVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...TGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
CDS-3UTR CCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGCCCAGGACCTTTTGGTaGTGTGGCCCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRPRTFW*CGPAWS
Trigger: ACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGG...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACCTCCCAGGACCTTTTaGTGGTGTGGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRPPRTF*WCGPAW
Trigger: CCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGG...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACCCTTCGGAACATCTTaGCTGGTATGGTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPPFGTS*LVWCAL
Trigger: AAGTGCACACCATACCAGCCAAGATGTTCCGAAGGG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQKPSLQ*ACTMVS
Trigger: GCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTT...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCACAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FPKALEERVYMFAGRLAPLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: VFLLHASEFRDHLEAITLRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HGVQQDSFLGFDCHIFPVMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...TACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TGGAGTTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WSSSIISCLTSKDTVCVSMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...AGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGCTGAGCTTGCCGAGATGCCTGGCTaGATCTGGAGCCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: TQLNKLHNSIRDSSLAELAEMPG*IWSQIP
Trigger: GGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGC...AAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSLLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp GGATCACGACCTCATTTAGTCTTAACTACTTTCTTACTCCAAATACATTACCATCCGCGGCATCCGCTCTaGGGGGACTTCCGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GSRPHLVLTTFLLQIHYHPRHPL*GDFRLN
Trigger: ATTGAGCCGGAAGTCCCCCCAGAGCGGATGCCGCGG...ATGGTAATGTATTTGGAGTAAGAAAGTAGTTAAGACTAAATGAGGTCGTGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR TCA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGACAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATACAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGCAATCATTTCCTGCTTaGCTTCAAAAGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMQSFPA*LQKTLS
Trigger: AGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTG...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCTCCACAGAAACAGCTaGGTTGCCCAGCACCAGACA +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSLHRNS*VAQHQT
Trigger: TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAG...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: WRRCWITSGWQLSTKYLLGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR TCA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: GSWRRCWITSGWQLSTKYVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR GCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAGTTAGTTTGTACTCATaGACATGGGTTGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLVSLYS*TWVGRH
Trigger: GTGCCGACCAACCCATGTGCATGAGTACAAACTAAC...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACACCCAACGCTGACAGCTaGATACAAGGAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATPNADS*IQGVGS
Trigger: ACTGCCTACTCCTTGTATGCAGCTGTCAGCGTTGGG...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGCACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
CDS-3UTR GCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTAACTGGGCTTTCCACTaGTCCACAGAAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLNWAFH*STETAE
Trigger: CTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTT...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTT +
Preference number: 4 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSSLQWA*TMVSTL
Trigger: AAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCT...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: FLLHASEFRDHLEAITLILNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALTFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CACCCTTCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HPSEHLGWYGVHFIQDHETFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...CTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCTTGCCTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LGSRGPGEDAGLHQGGNFLALIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAG...AAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp TCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACACAAATGGCACATTCTCATGGCTaGCACAGGCTGACAACATGG +
Preference number: 4 (lower is better)
Translates to: SVVLQDQLDFSIADSTQMAHSHG*HRLTTW
Trigger: CCATGTTGTCAGCCTGTGGCAGCCATGAGAATGTGC...CATTTGTGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR CCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: DVAIILQLHPVGFVELRPGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATATGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQIDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGTGAACCGGCAGATCTaGCTGTCGTCAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSVNRQI*LSSMVD
Trigger: GTCCACCATTGACGACAGCCAGATCTGCCGGTTCAC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: QTGPWGCQIYPVDLSLGKICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...CTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCAAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PADLAVVNGGPHLELGFPNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAGAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SEFLKRHSRITGSWRRCWLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...CCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGATGCCTGGCTGGATCTaGAGCCAAATTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQMPGWI*SQIPQP
Trigger: TGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCAT...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAAAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RKFKSTILSSSRTRVAVKKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...TTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGTACACAAATGACAAGAAGGGCAGGTGAGAGAAAGCATGCTCCGGTGTCTCTTCCAGCACACTCACTTTaGGCTGCATTTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: STQMTRRAGERKHAPVSLPAHSL*AAFPNS
Trigger: AGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGG...AAGAGACACCGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTCATTTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR TCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGAATCCACTTTGGTGCCTaGCTCATCCACCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRIHFGA*LIHLLP
Trigger: GGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGAT...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTTTGCAGCCCAACGCTaGCAGCTGCATACAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLFAAQR*QLHTRS
Trigger: ACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAA...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KRSVTYLGYEDGVNFGVVTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...CACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGACCCTAGATGACCTATaGAGGCACAGCCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTTLDDL*RHSQAL
Trigger: AAGGGCTTGGCTGTGCCTTCATAGGTCATCTAGGGT...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTGCTCCACACACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: WLSSMVDHILNWAFHCSTHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
CDS-3UTR GCA 90 bp ATAGCTGACAGTACACAAATGACAAGAAGGGCAGGTGAGAGAAAGCATGCTCCGACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: IADSTQMTRRAGERKHAPTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...CGGAGCATGCTTTCTCTCACCTGCCCTTCTTGTCATTTGTGTACTGTCAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR GCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR GCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGAATGACCCCCGAACGTaGACGCCCGTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRNDPRT*TPVSKH
Trigger: ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATT...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCAGAAACAGCTGAGTTaGCCAGCACCAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: KRSVTYLGYEDGVNFGVVQKQLS*PAPDSV
Trigger: AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTG...CACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTTTGGCTGGTATGGTGTaGACTTCATCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLLAGMV*TSSRIM
Trigger: CATGATCCTGGATGAAGTGCACACCATACCAGCCAA...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAACTTTCTGTAAGAGCTaGTGTTGCTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPTFCKS*CCSSFV
Trigger: GACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGT...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp GGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTCTCAGCTGTCACTTaGCTTAATAAACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: GRFACESLCDELSGLPFRVSAVT*LNKLHN
Trigger: ATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGAC...TCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp TCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACACAAATGCATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: SVVLQDQLDFSIADSTQMHSAAS*ISSCRG
Trigger: ACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATG...CATTTGTGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642308.1
CDS-3UTR CCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNHSAAS*ISSCRG
Trigger: ACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATG...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTGCTTCCAAGAAGATATaGCCATCGGGAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLLLLLHPCPFAHRSQTGASKKI*PSGATQ
Trigger: CTGGGTGGCTCCCGATGGCCATATCTTCTTGGAAGC...ACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGAGGTTGGTCGGCACACTaGCTCTGCAATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRGWSAH*LCNSHQ
Trigger: TTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACC...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGCGGATCACGGGGTCCTaGAGAAGATGCTGGATTACA +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLRITGS*RRCWIT
Trigger: TGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCG...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLIMRPHS*VLSHSM
Trigger: CATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCAT...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTACAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ILGSRGPGEDAGLHQGGNNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...GTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLLLLLHPCPFAHRSQTGKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...ACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGATATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTAAGCGCCGAGATGCCTaGCTGGATCTGGAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RYRVCSVEWHIPLGQTHCKRRDA*LDLEPN
Trigger: ATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTT...ACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACTTGCTCCGCGATGAGTaGTACTCCATGTACACAGTG +
Preference number: 4 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNLLRDE*YSMYTV
Trigger: CACTGTGTACATGGAGTACCACTCATCGCGGAGCAA...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAACAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATAGGCTTCACACTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHIGFTLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGTGTGAAGCC...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645467.1
3UTR CAA 72 bp TTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTG +
Preference number: 4 (lower is better)
Translates to: LINCIIPSGTPV*LSFLRYSVMSL
Trigger: CAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
3UTR CAA 72 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTaGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: SLGPIRKFKSTI*SSSRTRVAVKP
Trigger: GGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
3UTR CAA 72 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCA +
Preference number: 4 (lower is better)
Translates to: YNLDLPRISAAW*SKPFPVCPGIP
Trigger: TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSGMRSE*GHLLPA
Trigger: TGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCC...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCACCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SENLNPQFCHLRGRGSQSPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...TGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGGAGCCACCATGGGATaGGATCTGAATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSGATMG*DLNEDI
Trigger: AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACAGCAGCCTGTAGTCCTTaGCTCCATATTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATAACSP*LHIHPL
Trigger: AAGTGGATGAATATGGAGCCAAGGACTACAGGCTGC...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHISWRRC*ITSGWQ
Trigger: TTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGA...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGGACCACATCTTGAACTaGGCTTTCCACTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLDHILN*AFHCST
Trigger: TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTC...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AACTGCATAATTCCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGGTACTCGTTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NCIIPSGTPVLLSFLRYSLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...CGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQIRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTAGAATCTCTGCCGCTTaGTTGAGTAAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTRISAA*LSKPFP
Trigger: AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCAATTTGGCCAACGCTaGAGGGAAGGTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFQFGQR*REGQRG
Trigger: ACCTCTTTGACCTTCCCTCCAGCGTTGGCCAAATTG...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp ACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGCTGAGCTTCATAGTGCCGCTTCCTaGATTTCTTCTTGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: TQLNKLHNSIRDSSLAELHSAAS*ISSCLR
Trigger: GCGCAGACAAGAAGAAATCCAGGAAGCGGCACTATG...AAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS-3UTR CCA 90 bp TCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACACAAATGCACAGGCTGACAACATaGAGCACCTATGCCTATTGT +
Preference number: 4 (lower is better)
Translates to: SVVLQDQLDFSIADSTQMHRLTT*STYAYC
Trigger: ACAATAGGCATAGGTGCTCCATGTTGTCAGCCTGTG...CATTTGTGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642308.1
3UTR CAA 72 bp CTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAGGTCCATGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: LCLFFFFFILVH*LIEVKQVHGDV
Trigger: GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTCCAGACAGCGTTTTCTaGCAGTGCATGCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLIPDSVF*QCMQQS
Trigger: TGACTGCTGCATGCACTGTCAGAAAACGCTGTCTGG...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp ACTAATCATAGCGGATCACGACCTCATTTAGTCTTAACTACTTTCTTACTCCAAGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TNHSGSRPHLVLTTFLLQGSWRR*WITSGW
Trigger: CCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC...TTGGAGTAAGAAAGTAGTTAAGACTAAATGAGGTCGTGATCCGCTATGATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp AGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAATTTTCTGACAGTGCATaGAGCAGTCACACCAACCAG +
Preference number: 4 (lower is better)
Translates to: RKFKSTILSSSRTRVAVKFSDSA*SSHTNQ
Trigger: CTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAA...TTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTCTGAATGAGGACATTTaGTTCCGGCAGATCAAACGA +
Preference number: 4 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPLNEDI*FRQIKR
Trigger: TCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAG...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACAAGTCAACTCATGTCATaGTCTGCTCAAATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATSQLMS*SAQIPQ
Trigger: CTGAGGGATTTGAGCAGAGCATGACATGAGTTGACT...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR GCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGATCACCCAGAACACAATaGTGGATCCAGAGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRSPRTQ*WIQSVA
Trigger: CGCTACACTCTGGATCCAGCATTGTGTTCTGGGTGA...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp GTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: VLEKMLDYIRVATFNEVSGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...AGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGACATCTTGGCTGGTATaGTGTGCACTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQTSWLV*CALHPG
Trigger: TCCTGGATGAAGTGCACACCATACCAGCCAAGATGT...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTCGGAACATCTTGGCTaGTATGGTGTGCACTTCATC +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLSEHLG*YGVHFI
Trigger: GATGAAGTGCACACCATACCAGCCAAGATGTTCCGA...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATCAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: DQKLASSKFVGVHGVQQDQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...ATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCACAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: SENLNPQFCHLRGRGSQSQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...TGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: EDICFRQIKRSVTYLGYEICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAACTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPTCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAGT...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645504.1
CDS-3UTR TCA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACTAATCATAGCGGATCACGACCTCATTTAGTCTTAACTACTTTCTTACTCCAATCCCCACAGGAAATCTaGATGGCACATTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: TNHSGSRPHLVLTTFLLQSPQEI*MAHSHG
Trigger: GCCATGAGAATGTGCCATTCAGATTTCCTGTGGGGA...TTGGAGTAAGAAAGTAGTTAAGACTAAATGAGGTCGTGATCCGCTATGATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR TCA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATTGTGTACTCACATaGCAAGAAGGGCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRHCVLT*QEGQVR
Trigger: TCTCACCTGCCCTTCTTGTCATGTGAGTACACAATG...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR GCA 90 bp GAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACAGTACAACGAAGTATCTGTTGTaGTTCAAGACCAGCTTGACT +
Preference number: 4 (lower is better)
Translates to: EVSVVLQDQLDFSIADSTTKYLL*FKTSLT
Trigger: AGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGT...TGTACTGTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp ACAGCAGCCAGGGCAGTATTTTTACAGTGTAAAGTCAACTCATGTCATGCTCTGTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: TAARAVFLQCKVNSCHALCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...CAGAGCATGACATGAGTTGACTTTACACTGTAAAAATACTGCCCTGGCTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR GCA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAGTCTCAGCTGTCACTTaGCTTAATAAACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPVSAVT*LNKLHN
Trigger: ATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGAC...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CCA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGATATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTGTCAGATTTACCCTGTaGATCTGTCACTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RYRVCSVEWHIPLGQTHCVRFTL*ICHSGS
Trigger: ACTTCCCGAGTGACAGATCCACAGGGTAAATCTGAC...ACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLSQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTCAGCACACTGGACTTTaGCGATGTAGCCATTATTCT +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSQHTGL*RCSHYS
Trigger: AGAATAATGGCTACATCGCCAAAGTCCAGTGTGCTG...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTGCTATTTGTTGGGGTTCATaGTGTACAGCAAGATTCGTT +
Preference number: 4 (lower is better)
Translates to: EDAGLHQGGNFQRSICCAICWGS*CTARFV
Trigger: AACGAATCTTGCTGTACACCATGAACCCCAACAAAT...AGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CCA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: FLLHASEFRDHLEAITLINLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATSFLLS*NLIRNW
Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTCCATGGGATGAGATCTaGATGAGGACATTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLIPWDEI*MRTFAS
Trigger: GGAAGCAAATGTCCTCATTCAGATCTCATCCCATGG...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR TCA 90 bp AGATATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTGTCCTGGGATACCAGTaGGTAGAAAAAGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: RYRVCSVEWHIPLGQTHCVLGYQ*VEKGIV
Trigger: TACAATGCCTTTTTCTACTCACTGGTATCCCAGGAC...ACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TGGAGTTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTGTAAGAGCTGCTGTTaGTCTTCTTTTGTCGAAAAC +
Preference number: 4 (lower is better)
Translates to: WSSSIISCLTSKDTVCVSCKSCC*SSFVEN
Trigger: GTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA...AGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHIWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTGGATTACATCAGGGTaGCAACTTTCAACGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFWITSG*QLSTKY
Trigger: ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NEVSPTLDMKMVLILGLCVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...GCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp TTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGGTTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LINCIIPSGTPVLLSFLRFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...CCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CCA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFGIFVN*REGFQE
Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTAGTCAAACAGGTCCATaGGGATGTCAGATTTACCCT +
Preference number: 4 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLISQTGP*GCQIYP
Trigger: AGGGTAAATCTGACATCCCCATGGACCTGTTTGACT...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGTTTGTTCAGTCGAATaGCATATTCCTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSVCSVE*HIPLGQ
Trigger: TTGCCCTAAAGGAATATGCCATTCGACTGAACAAAC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAATTGTGCTTGAAATTCTaGAGAATTTGCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQLCLKF*RICILS
Trigger: GGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAA...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 72 bp GTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTCTGGAGAATTTGCATC +
Preference number: 4 (lower is better)
Translates to: VSPTLDMKMVLI*GLCLKFWRICI
Trigger: GATGCAAATTCTCCAGAATTTCAAGCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCCACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: NEVSPTLDMKMVLILGLCHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...GCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR GCA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAATTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp CATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: HGVQQDSFLGFDCHIFPVNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...TACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CCA 90 bp GATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: DQKLASSKFVGVHGVQQDNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...ATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
3UTR CAA 72 bp TTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATaGTCAGCAAAGACAATAATCTTGTCATTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FSRMAYSFRANT*SAKTIILSFLL
Trigger: AAGGAGGAATGACAAGATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR GCA 90 bp AGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAATTTCTTGGTTTTGATTaGCACATATTCCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RKFKSTILSSSRTRVAVKFLGFD*HIFPVK
Trigger: TTTTACCGGGAATATGTGGCAATCAAAACCAAGAAA...TTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CCA 90 bp AGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAAAACTTGATCAGAAACTaGCAAGCTCTAAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: RKFKSTILSSSRTRVAVKNLIRN*QALNLL
Trigger: CAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT...TTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR TCA 90 bp ACTAATCATAGCGGATCACGACCTCATTTAGTCTTAACTACTTTCTTACTCCAATTTGAAGACAAAATTTaGGGGGAACACACACAATTC +
Preference number: 4 (lower is better)
Translates to: TNHSGSRPHLVLTTFLLQFEDKI*GEHTQF
Trigger: GAATTGTGTGTGTTCCCCTCAAATTTTGTCTTCAAA...TTGGAGTAAGAAAGTAGTTAAGACTAAATGAGGTCGTGATCCGCTATGATTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR GCA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTCACAACTTAATAAACTaGATAATTCCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLIHNLIN*IIPSGT
Trigger: AGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTG...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645467.1
ENST00000645736.1
CDS CCA 90 bp CGCAGGCGTTGCGCCCCTCACCCGTCTCCCCTAGGCCGAGTTCGCTaGGCTGCGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: RRRCAPHPSPLGRVR*AAPRSSISPAQRPV
Trigger: GACAGGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGGTGAGGGGCGCAACGCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS GCA 90 bp GCGTTGCGCCCCTCACCCGTCTCCCCTAGGCCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCCTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: ALRPSPVSPRPSSLG*AQVQHLSRPKACPN
Trigger: GTTGGGACAGGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGGTGAGGGGCGCAACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS CCA 90 bp GCCCGCGCAACGTCTCACCGCGGTCCGCTCGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGAGAAGATGACCCCGCTCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ARATSHRGPLGLFCP*QLQQQREDDPAPTG
Trigger: GCCTGTGGGAGCGGGGTCATCTTCTCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGACCGCGGTGAGACGTTGCGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS-3UTR CAA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS GCA 90 bp CTGGATTTCTTCTTGTCCGTCTCCCCTAGGCCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCCTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LDFFLSVSPRPSSLG*AQVQHLSRPKACPN
Trigger: GTTGGGACAGGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGACAAGAAGAAATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS CCA 90 bp GCTTCCTGGATTTCTTCTTGTCCGTCTCCCCTAGGCCGAGTTCGCTaGGCTGCGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: ASWISSCPSPLGRVR*AAPRSSISPAQRPV
Trigger: GACAGGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGACAAGAAGAAATCCAGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS-3UTR CAA 90 bp CACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCATGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: HSMTRSASQDLLVVWPSMPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCCCCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTGCAGGGCAGGTGGAATaGCTGGTCTCAGCTGTCACT +
Preference number: 5 (lower is better)
Translates to: APLLGLEPLHDSLGLPGPAGQVE*LVSAVT
Trigger: AGTGACAGCTGAGACCAGCAATTCCACCTGCCCTGC...AGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CAA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: APQGRTMTPERARPFPNIEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...GATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AGVHVCWAPCSAMSGTPCEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...ACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGTGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: CWAPCSAMSGTPCTQCRRCLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...CCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS CCA 90 bp CAGCCCTGCGGGGCTCAGATTCACACAGTGCTGGTCATAGTGCCATaGCACCTCAGTCCTGCCAGGACGGCACACTTTCCACCAACAGCT +
Preference number: 5 (lower is better)
Translates to: QPCGAQIHTVLVIVP*HLSPARTAHFPPTA
Trigger: AGCTGTTGGTGGAAAGTGTGCCGTCCTGGCAGGACTGAGGTGCCATGGCACTATGACCAGCACTGTGTGAATCTGAGCCCCGCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS CCA 90 bp CCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: PGMVCTSSRIMRPHS*VLSHSMTRSASQDL
Trigger: AAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645736.1
ENST00000647169.1
CDS-3UTR CAA 90 bp GAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: EQPMGLSLASEVNRQIWLTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: STAGKNNDPRTCTPVSKHEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...ATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: LGIGGEPADLAVVNGGPHASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...ATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGATGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: LTVHAAVTPTRDFPAPQGCLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...TCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS TCA 90 bp TACAGACGATGTGCACATCTGCCCAGGCCCAGCCACTCCACGTCATaGCTCTGGGAACTCCAACCACTGCTCCTCAACAGGCAGCACCGA +
Preference number: 5 (lower is better)
Translates to: YRRCAHLPRPSHSTS*LWELQPLLLNRQHR
Trigger: TCGGTGCTGCCTGTTGAGGAGCAGTGGTTGGAGTTCCCAGAGTCATGACGTGGAGTGGCTGGGCCTGGGCAGATGTGCACATCGTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 90 bp CGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCCTTGGGTTTCAGGACCACAG +
Preference number: 5 (lower is better)
Translates to: RGSQSNPAYSGPARW*APFGTSWPWVSGPQ
Trigger: CTGTGGTCCTGAAACCCAAGGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647169.1
CDS GCA 90 bp AGTCCTTCTGGGCCAGGGATCCAGAGTACAGACGATGTGCACATCTaGCCAGGCCCAGCCACTCCACGTCATGACTCTGGGAACTCCAAC +
Preference number: 5 (lower is better)
Translates to: SPSGPGIQSTDDVHI*PGPATPRHDSGNSN
Trigger: GTTGGAGTTCCCAGAGTCATGACGTGGAGTGGCTGGGCCTGGGCAGATGTGCACATCGTCTGTACTCTGGATCCCTGGCCCAGAAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTTCGGAACATCTTGGCCTTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SSRTRVAVKPSLQWA*TMVSTLRNILALGF
Trigger: GAAACCCAAGGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647169.1
CDS CCA 90 bp TCCTGGATTTCTTCTTGTCGCGGTCCGCTCGGTCTCTTTTGCCCATaGCAGCTACAGCAGCAGAGAGAAGATGACCCCGCTCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SWISSCRGPLGLFCP*QLQQQREDDPAPTG
Trigger: GCCTGTGGGAGCGGGGTCATCTTCTCTCTGCTGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000285398.7
ENST00000462306.5
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
ENST00000647169.1
CDS CCA 90 bp ACAAGTGACTGGAAGGCACAGGCTGTGGCCCTTTGTGAAGGTCCCTaGCATCTGCTGTGCTCCGCAACTGGGGCTTCCAGCAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: TSDWKAQAVALCEGP*HLLCSATGASSRNE
Trigger: CTCATTCCTGCTGGAAGCCCCAGTTGCGGAGCACAGCAGATGCCAGGGACCTTCACAAAGGGCCACAGCCTGTGCCTTCCAGTCACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 90 bp ACTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTaGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: TGMVCTSSRIMRPHS*VLSHSMTRSASQDL
Trigger: AAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CAA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SSRTRVAVKPSLQWACTMSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...CATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAACCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTGTACATGTTTGCTGGGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACAGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GVHVCWAPCSAMSGTPCTASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...TGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CGTTTTCTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: RFLTVHAAVTPTRDFPAPPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: WYGVHFIQDHEAPLLGLEPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS CCA 90 bp CCTAATGCTTGGTGCCTGCCTGCTGACAGTGGCCCTCGCTTCTCCTaGAGGCCAGGGTATCAAGAAGGCCTTGGTCCTAGTCTAACCAGA +
Preference number: 5 (lower is better)
Translates to: PNAWCLPADSGPRFS*RPGYQEGLGPSLTR
Trigger: TCTGGTTAGACTAGGACCAAGGCCTTCTTGATACCCTGGCCTCCAGGAGAAGCGAGGGCCACTGTCAGCAGGCAGGCACCAAGCATTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS CCA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTaGGCCTGCACGATGGTGAGCACCCTTCGGAACATCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSSSRTRVAVKPSLQ*ACTMVSTLRNILAL
Trigger: CAAGGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647169.1
CDS-3UTR CAA 90 bp CTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATTCCGCTCGGTCTCTTTaGCCCATGGCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: LGIGGEPADLAVVNGGPHSARSL*PMAATA
Trigger: TGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGA...ATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTTAAGCGGCATTCTCGGCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: SVMSSVASPSEFLKRHSRPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...CCGAGAATGCCGCTTAAGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: PCGSVTREVEGPPLLSAVTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...GACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCAAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SEHLGWYGVHFIQDHEAPSGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...TGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: PLLGLEPLHDSLGLPGPFPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...AAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SHSMTRSASQDLLVVWPSSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...GCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: FPKALEERVYMFAGRLAPGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQREQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCTTCCTGGATTTCTTCTaGTCCGTCTCCCCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: GMVCTSSRIMRPHSWVLSFLDFF*SVSPRP
Trigger: CGGCCTAGGGGAGACGGACAAGAAGAAATCCAGGAA...GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS TCA 90 bp GCTGATGAAAGGAAGAGCTCTCCTAGCTACCTAGAGAGGCATCCCTaGGAAAGCAGCCCTGCGGGGCTCAGATTCACACAGTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ADERKSSPSYLERHP*ESSPAGLRFTQCWS
Trigger: TGACCAGCACTGTGTGAATCTGAGCCCCGCAGGGCTGCTTTCTCAGGGATGCCTCTCTAGGTAGCTAGGAGAGCTCTTCCTTTCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS GCA 90 bp TCAGATTCACACAGTGCTGGTCATAGTGCCATGGCACCTCAGTCCTaGCAGGACGGCACACTTTCCACCAACAGCTGCCCTCAGAGATTC +
Preference number: 5 (lower is better)
Translates to: SDSHSAGHSAMAPQS*QDGTLSTNSCPQRF
Trigger: GAATCTCTGAGGGCAGCTGTTGGTGGAAAGTGTGCCGTCCTGGCAGGACTGAGGTGCCATGGCACTATGACCAGCACTGTGTGAATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS CCA 90 bp GGTAGCCTTCACATCTTGGAGCAGACAAAGGAAGGGACAAGTGACTaGAAGGCACAGGCTGTGGCCCTTTGTGAAGGTCCCTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: GSLHILEQTKEGTSD*KAQAVALCEGPWHL
Trigger: CAGATGCCAGGGACCTTCACAAAGGGCCACAGCCTGTGCCTTCCAGTCACTTGTCCCTTCCTTTGTCTGCTCCAAGATGTGAAGGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS-3UTR CAA 90 bp TCGGAACATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCATCCGCTCGGTCTCTTTaGCCCATGGCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: SEHLGWYGVHFIQDHEAPSARSL*PMAATA
Trigger: TGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGA...TGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATGTTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACTGCTCCACATCCGCTCGGTCTCTTTaGCCCATGGCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: WLSSMVDHILNWAFHCSTSARSL*PMAATA
Trigger: TGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGA...TGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ETAELPSTRQRFLTVHAAVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...TGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: MSDLPCGSVTREVEGPPLSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...CAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCACCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: VFLLHASEFRDHLEAITLPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTCCTCCTCGCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: RDAWLDLEPNSPATTSSSQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...CGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTAAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVSGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCTTCCTGGATTTCTTCTaGTCTGCGCCGCCGCAAACT +
Preference number: 5 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTFLDFF*SAPPQT
Trigger: AGTTTGCGGCGGCGCAGACAAGAAGAAATCCAGGAA...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS TCA 90 bp TTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTaGTCACCTGCAAAGCCCAAGCCAGCAGACATGCCCCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LSKTPSLPPPCQRVS*SPAKPKPADMPLSA
Trigger: AGCAGAAAGGGGCATGTCTGCTGGCTTGGGCTTTGCAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 90 bp CATGCTCTGCTCAAATCCCTCAGATGGCTTCACACTGGTATGGTGTaGACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HALLKSLRWLHTGMV*TSSRIMRPHSWVLS
Trigger: GCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGTGTGAAGCCATCTGAGGGATTTGAGCAGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CAA 90 bp TCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SSRTRVAVKPSLQWACTMSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...CATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGAACACAATGCTGGATCCAGAGTGTAGCGGCTCATGAGAAGCATGGCCTCACCTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RTQCWIQSVAAHEKHGLTSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...GGTGAGGCCATGCTTCTCATGAGCCGCTACACTCTGGATCCAGCATTGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ALLRDEWYSMYTVSSAPDSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...GTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR CAA 90 bp AGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGGTGGTGTGGCCCAGCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: SHSMTRSASQDLLVVWPSFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...GCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGTAAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: CKSCCCSSFVENAKSSSSPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...GGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: FACESLCDELSGLPFRVSPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...AGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCTTGGCTGGTATGGTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: HLGWYGVHFIQDHEAPLLTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...CAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGCCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PMGLSLASEVNRQIWLSSAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...TGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCACTCCTGGGTCTTGAGCCACTCCATGACTCGCTCGGCCTCCCAGGACCTTTTGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PLLGLEPLHDSLGLPGPFAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...AAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: TLWICHSGSGGPTTAFSSHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...ACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATGCATCCCGCAGGCGTaGCGCCCCTCACCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHICIPQA*RPSPVS
Trigger: GGAGACGGGTGAGGGGCGCAACGCCTGCGGGATGCA...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS GCA 90 bp AGTGCTGGGTTAAAGACACCTGAGAGAACTGAAATCCTAAATGCCTaGCCCCACCCAAGGGTGGCCCAGGAGTCCACATACGGCAGATTT +
Preference number: 5 (lower is better)
Translates to: SAGLKTPERTEILNA*PHPRVAQESTYGRF
Trigger: AAATCTGCCGTATGTGGACTCCTGGGCCACCCTTGGGTGGGGGCAGGCATTTAGGATTTCAGTTCTCTCAGGTGTCTTTAACCCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460485.1
ENST00000494464.5
ENST00000646042.1
CDS CCA 90 bp TCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTATCTGCAAGCAGGGGAGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: SRITGSWRRCWITSG*QLSTKYLQAGEEEG
Trigger: CCCTTCTTCCTCCCCTGCTTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS-3UTR CAA 90 bp GGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCCGCTCGGTCTCTTTaGCCCATGGCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: GVLEKMLDYIRVATFNEVSARSL*PMAATA
Trigger: TGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGA...TACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp ACAGCTGAGTTGCCCAGCACCAGACAGCGTTTTCTGACAGTGCATGCAGCAGTCCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: TAELPSTRQRFLTVHAAVPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...GACTGCTGCATGCACTGTCAGAAAACGCTGTCTGGTGCTGGGCAACTCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CACAATTCAGTCCCCAGCACACTCACTTTGGGCTGCATTTCCAAATTCTCCCTGGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: HNSVPSTLTLGCISKFSLVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: HHFLKRLKSGCTCLLGALTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: LGSRGPGEDAGLHQGGNFMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...AAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCGGAGGTGAACCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: VLMATEQPMGLSLASEVNQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...GTTCACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAAGCACCCGCCCTAGCCTTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: EAPALAFGLPDAWSHHGMKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...CATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTAGGGCGGGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTGCATGCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LTVHAAVTPTRDFPAPQGAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...TCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: ASGRSNEVSPTLDMKMVLSGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...TAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: LGIGGEPADLAVVNGGPHHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...ATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS TCA 90 bp CACCAACAGCTGCCCTCAGAGATTCATGCAGAGATAAAGGGAGTTTaGGGCAAGGCCTCTAATCTCCTAATGCTTGGTGCCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HQQLPSEIHAEIKGV*GKASNLLMLGACLL
Trigger: CAGCAGGCAGGCACCAAGCATTAGGAGATTAGAGGCCTTGCCTCAAACTCCCTTTATCTCTGCATGAATCTCTGAGGGCAGCTGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS-3UTR CAA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: FLLHASEFRDHLEAITLIVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: FACESLCDELSGLPFRVSGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...AGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: GPGEDAGLHQGGNFQRSIGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...GATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGACAGAAACAGCTGAGTaGCCCAGCACCAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: VFLLHASEFRDHLEAITLTETAE*PSTRQR
Trigger: ACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGT...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCAGACAGCGTTTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: GLSTAPQKQLSCPAPDSVWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...AACGCTGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGCGCCTTGCTCCGCGATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: GALLRDEWYSMYTVSSAPKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...TGGGGCCGACGACACTGTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: TRDFPAPQGRTMTPERARLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...GCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: PSGTPVLLSFLRYSVMSLHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...CAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp ATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: MSDLPCGSVTREVEGPPLHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...CAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGTAAATCTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCGCAGGGCAGGTGGAATaGCTGGTCTCAGCTGTCACT +
Preference number: 5 (lower is better)
Translates to: GPGEDAGLHQGGNFQRSIAGQVE*LVSAVT
Trigger: AGTGACAGCTGAGACCAGCAATTCCACCTGCCCTGC...GATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS TCA 90 bp TCAGGTCCTTCCCATATCCCTTTATTCCTGCTGGTGCGCAGAAAGTaGCAGTGCCTTGGGACAGGCCTGTCATGGAATCTCTTACCTGTT +
Preference number: 5 (lower is better)
Translates to: SGPSHIPLFLLVRRK*QCLGTGLSWNLLPV
Trigger: AACAGGTAAGAGATTCCATGACAGGCCTGTCCCAAGGCACTGTCACTTTCTGCGCACCAGCAGGAATAAAGGGATATGGGAAGGACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462306.5
ENST00000646042.1
CDS TCA 90 bp CCTGAGCCCAGCTCCACTGCTAGAGGAAATACAGTGGCCAGTGGATaGGTTTCCAGTCTGGGCCACATCTCTTGTTTCTCTTCTCTTATC +
Preference number: 5 (lower is better)
Translates to: PEPSSTARGNTVASG*VSSLGHISCFSSLI
Trigger: GATAAGAGAAGAGAAACAAGAGATGTGGCCCAGACTGGAAACTCATCCACTGGCCACTGTATTTCCTCTAGCAGTGGAGCTGGGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462306.5
ENST00000646042.1
CDS TCA 90 bp TTTGGGCTTCCTGACGCCTGGAGCCACCATGGGATGAGATCTGAATaGGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACTT +
Preference number: 5 (lower is better)
Translates to: FGLPDAWSHHGMRSE*GHLLPADQTKCHLL
Trigger: AAGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645504.1
CDS GCA 90 bp GAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTaGAAGCAGGGGAGGAAGAAGGGGTCTACTGACCAGCAGGTACCT +
Preference number: 5 (lower is better)
Translates to: EDAGLHQGGNFQRSI*KQGRKKGSTDQQVP
Trigger: AGGTACCTGCTGGTCAGTAGACCCCTTCTTCCTCCCCTGCTTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS CCA 90 bp AGACAGCATAAACATCAGGTCCTTCCCATATCCCTTTATTCCTGCTaGTGCGCAGAAAGTGACAGTGCCTTGGGACAGGCCTGTCATGGA +
Preference number: 5 (lower is better)
Translates to: RQHKHQVLPISLYSC*CAESDSALGQACHG
Trigger: TCCATGACAGGCCTGTCCCAAGGCACTGTCACTTTCTGCGCACCAGCAGGAATAAAGGGATATGGGAAGGACCTGATGTTTATGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462306.5
ENST00000646042.1
CDS-3UTR CAA 90 bp TTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGGGCGCCTTGCTCCGAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: FPKALEERVYMFAGRLAPSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...CGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: LSSSRTRVAVKPSLQWACFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...GCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTCAACGAAGTATCTGTTGTGCTTCAAGACCAGCTTGACTTTTCCATAGCTGACGAGCAGCCGATGGGCTaGTCCTTGGCATCGGAGGTG +
Preference number: 5 (lower is better)
Translates to: FNEVSVVLQDQLDFSIADEQPMG*SLASEV
Trigger: CACCTCCGATGCCAAGGACAAGCCCATCGGCTGCTC...GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
CDS-3UTR CAA 90 bp CTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGCCTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: LDQKLASSKFVGVHGVQQASQDL*VVWPSM
Trigger: CATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGC...TTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: RISAAWLSKPFPVCPGIPTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...TGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: ASEVNRQIWLSSMVDHILFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...CAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGTGGATCTGTCACTCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: LWICHSGSGGPTTAFSSLFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...AAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAATTCCCCAGCCACCACCTAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: QSAEMPGWIWSQIPQPPPSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...AGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PQGRTMTPERARPFPNIFQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCGGCAGATCTGGCTGTCGTCAATGGTGGACCACATCTTGAACTGGGCTTTCCACAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PADLAVVNGGPHLELGFPQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...TGGAAAGCCCAGTTCAAGATGTGGTCCACCATTGACGACAGCCAGATCTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTCATCTTCGCGGACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTGCACAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: VIFADEGRSQTQLTVGLHKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...GTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: EFLKRHSRITGSWRRCWIISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...AATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: AAWLSKPFPVCPGIPVSRISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...TCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATAAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHISGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: NEVSPTLDMKMVLILGLCSGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...GCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAACAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: ENLNPQFCHLRGRGSQSNSGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...GTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCACATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS GCA 90 bp GGCAGGTGGAATTGCTGGTCTCAGCTGTCACTTGCCTTAATAAACTaGATAATTCCATCAGGGACTCCAGTCTTGCTGAGCTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRWNCWSQLSLALIN*IIPSGTPVLLSFLR
Trigger: CCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CAA 90 bp TGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTCCGCTCGGTCTCTTTaGCCCATGGCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: WRRCWITSGWQLSTKYLLSARSL*PMAATA
Trigger: TGCTGTAGCTGCCATGGGCAAAAGAGACCGAGCGGA...CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp AATGGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: NGRFACESLCDELSGLPFPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...GAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: FASGRSNEVSPTLDMKMVSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...CACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ILNWAFHCSTETAELPSTSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...GGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCAGCAGTCACACCAACCAGGGACTTTCCAGCACCGCAGGGAAGAACAATGACCTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: AAVTPTRDFPAPQGRTMTFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...GGTCATTGTTCTTCCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATGGGCTTGTCCTTGGCATCGGAGGTGAACCGGCAGATCTGGCTGTCGTCAATTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: DGLVLGIGGEPADLAVVNSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...ATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCCGATGGGCTTGTCCTaGGCATCGGAGGTGAACCGG +
Preference number: 5 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSPMGLS*ASEVNR
Trigger: CCGGTTCACCTCCGATGCCAAGGACAAGCCCATCGG...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGCCCCACTCCTGGGTCTaGAGCCACTCCATGACTCGC +
Preference number: 5 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRPHSWV*SHSMTR
Trigger: GCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGG...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGCACTTCATCCAGGATCATGAGGCCCCACTCCTGGGTCTTGAGCCACTCCAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: VCTSSRIMRPHSWVLSHSSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...GGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATCTTGAACTGGGCTTTCCACTGCTCCACAGAAACAGCTGAGTTGCCCAGCACCTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: ILNWAFHCSTETAELPSTWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...GGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCGCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: PQGRTMTPERARPFPNIFEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...AAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GCAGGGAAGAACAATGACCCCCGAACGTGCACGCCCGTTTCCAAACATCTTTCGGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: AGKNNDPRTCTPVSKHLSEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...CGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTTCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGCGCCGCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: HVHSVVGPRHRTHGAKAPLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...CGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHICLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFCLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGGCCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: PFPLRRRSVDIGFVQSNGHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...GCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTGGCTCACCGCTTCTGTCTTGCTTCCTTCAGTCTATTTCCAGCACAGCAGCCACTCACCGCTTCTGTCTaGCTTCCTTCAGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: LAHRFCLASFSLFPAQQPLTASV*LPSVYF
Trigger: GAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAG...TGGCTGCTGTGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS TCA 90 bp ATTGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATTGCTCTTTCTaGCCTGGTGCTCCTCTTACCCTCACAGCTCGGCAGGAATCAGGA +
Preference number: 5 (lower is better)
Translates to: IVPFCRGHLSKNCSF*PGAPLTLTARQESG
Trigger: TCCTGATTCCTGCCGAGCTGTGAGGGTAAGAGGAGCACCAGGTCAGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 90 bp AAAAGACAGCATAAACATCAGGTCCTTCCCATATCCCTTTATTCCTaGTGGTGCGCAGAAAGTGACAGTGCCTTGGGACAGGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: KRQHKHQVLPISLYS*WCAESDSALGQACH
Trigger: ATGACAGGCCTGTCCCAAGGCACTGTCACTTTCTGCGCACCAGCAGGAATAAAGGGATATGGGAAGGACCTGATGTTTATGCTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462306.5
ENST00000646042.1
CDS GCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: EFLKRHSRITGSWRR*WITSGWQLSTKYLQ
Trigger: TTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS CCA 90 bp TTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: FLKRHSRITGSWRRC*ITSGWQLSTKYLQA
Trigger: TGCTTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS CCA 90 bp GCAGCACCGAAGACACAGCTCCAACCAACACAAACTACTACGGCATaGCATTGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: AAPKTQLQPTQTTTA*HCAFLSRSPFKELL
Trigger: GAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGGTTGGAGCTGTGTCTTCGGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS-3UTR CAA 90 bp TTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: FFFFILVHLLIEVKQVHGGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...CCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGTGCTTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: EDAGLHQGGNFQRSICCASGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...AGCACAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ADLLVKVSVMSSVASPSESTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...CTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GACATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: DIELMVPKRRDAWLDLEPKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...TGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAACTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: SRGPGEDAGLHQGGNFQRAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...TCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GATGAGTGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: DEWYSMYTVSSAPDIELMAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...CATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACAGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS CCA 90 bp AATCTTAGTGATTTTAAAAGGCTCCTTCGGGTAGCCTTCACATCTTaGAGCAGACAAAGGAAGGGACAAGTGACTGGAAGGCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: NLSDFKRLLRVAFTS*SRQRKGQVTGRHRL
Trigger: CAGCCTGTGCCTTCCAGTCACTTGTCCCTTCCTTTGTCTGCTCCAAGATGTGAAGGCTACCCGAAGGAGCCTTTTAAAATCACTAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 90 bp CAGTGTAAAGTCAACTCATGTCATGCTCTGCTCAAATCCCTCAGATaGCTTCACACTGGTATGGTGTGCACTTCATCCAGGATCATGAGG +
Preference number: 5 (lower is better)
Translates to: QCKVNSCHALLKSLR*LHTGMVCTSSRIMR
Trigger: CCTCATGATCCTGGATGAAGTGCACACCATACCAGTGTGAAGCCATCTGAGGGATTTGAGCAGAGCATGACATGAGTTGACTTTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CAA 90 bp CTGACAGTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: LTVHNLINCIIPSGTPVLVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...CAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSVLQRH*QPVVLG
Trigger: GCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGAC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSGDVTG*QPNADS
Trigger: GCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGTCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: FFFFILVHLLIEVKQVHGSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...CCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACATATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: VGVHGVQQDSFLGFDCHISGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...TATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTGTTGATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: WRRCWITSGWQLSTKYLLMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...CAACAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp TTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: FFILVHLLIEVKQVHGDVMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...GACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: GPIRKFKSTILSSSRTRVTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...GACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATAGAACTCATGGTGCCAAAGCGCCGAGATGCCTGGCTGGATCTGGAGCCAAAAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: HRTHGAKAPRCLAGSGAKSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...TTTGGCTCCAGATCCAGCCAGGCATCTCGGCGCTTTGGCACCATGAGTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGCCACAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: SCCCSSFVENAKSSSSMPQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...TGGCATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGCACATGGGTTGGTCGGCACACTGGCTCTGCAATAGCCACCAAGAAGTCTTGGTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: CTWVGRHTGSAIATKKSWFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...CCAAGACTTCTTGGTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp GTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTGCTTGTGGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: VEGPPLLSAVLEMADLLVEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...CACAAGCAAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: DVAIILQLHPVGFVELRPEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: RQVFLLHASEFRDHLEAIEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...TATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: QTGPWGCQIYPVDLSLGKEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...CTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: SDHGVLEKMLDYIRVATFLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...GAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GTCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: VFLLHASEFRDHLEAITLAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...CAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGATGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRCLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTAGCGGGTGTACATGTTaGCTGGGCGCCTTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLISGCTC*LGALLR
Trigger: GCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCT...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCTGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SSIISCLTSKDTVCVSSSGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...AGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGAGGGTCGCAGTCAAAGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RKFKSTILSSSRTRVAVKGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...TTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS GCA 90 bp GTTACATTAGCAGGGCAGGTGGAATTGCTGGTCTCAGCTGTCACTTaGCTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: VTLAGQVELLVSAVT*LNKLHNSIRDSSLA
Trigger: AGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCCCTGCTAATGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS GCA 90 bp GAGTTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATaGTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTTAAT +
Preference number: 5 (lower is better)
Translates to: EFLKRHSRITGSWRR*WITSGWQLSTKYLN
Trigger: ATTAAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: GPGEDAGLHQGGNFQRSISHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...GATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000645233.1
CDS-3UTR CAA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: FLLHASEFRDHLEAITLISHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KSCCCSSFVENAKSSSSMSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...CATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR CAA 90 bp GGGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GSWRRCWITSGWQLSTKYSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...ATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp CAAACAGGTCCATGGGGATGTCAGATTTACCCTGTGGATCTGTCACTCGGGAAGTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: QTGPWGCQIYPVDLSLGKSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...CTTCCCGAGTGACAGATCCACAGGGTAAATCTGACATCCCCATGGACCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGCCTAAGCATCATTTCCTAAAGCGCTTGAAGAGCGGGTGTACATGTTTGCTGTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LPKHHFLKRLKSGCTCLLWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...CAGCAAACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATGATGCTTAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGTACTCCATGTACACAGTGTCGTCGGCCCCAGACATAGAACTCATGGTGCCAAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: WYSMYTVSSAPDIELMVPKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...TGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTTGTTTGCTGGGCGCCTaGCTCCGCGATGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLICLLGA*LRDEWY
Trigger: GTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACA...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCCCAGCACACTCACTTaGGGCTGCATTTCCAAATTC +
Preference number: 5 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLPSTLT*GCISKF
Trigger: GAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGG...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CAA 90 bp CAAGATTCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QDSFLGFDCHIFPVKFRRSGTPV*LSFLRY
Trigger: GTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGA...TCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGTCTGTGTCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: LSVSLLLLLHPCPFAHRSMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...ACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGACACAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCAAACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGATGGTGGACCACATCTaGAACTGGGCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SNEVSPTLDMKMVLILGLMVDHI*NWAFHC
Trigger: GCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCAT...CAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGACCCTTCGGAACATCTaGGCTGGTATGGTGTGCACT +
Preference number: 5 (lower is better)
Translates to: LTVHNLINCIIPSGTPVLTLRNI*AGMVCT
Trigger: AGTGCACACCATACCAGCCAAGATGTTCCGAAGGGT...CAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCACAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATGTAGCCATTATTCTGCAGCTCCATCCAGTTGGCTTCGTAGAGCTTAGGCCCTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: DVAIILQLHPVGFVELRPFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...GGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGCTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTGGCTCACCGCTTCTGTCTTGCTTCCTTCAGTCTATTTCCAGCACAGCAGCCATTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: LAHRFCLASFSLFPAQQPFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...TGGCTGCTGTGCTGGAAATAGACTGAAGGAAGCAAGACAGAAGCGGTGAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS-3UTR CAA 90 bp TCGGGAAGTGGAGGGCCCACCACTGCTTTCAGCAGTCTTAGAAATGGCAGATTTTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: SGSGGPTTAFSSLRNGRFFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...AAATCTGCCATTTCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: DQKLASSKFVGVHGVQQDISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...ATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGCCACAATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LLGFMVYSKIRFLVLIATISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...TGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTGGCACAGCCAAGCCCTaGATGCATCTTCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLIGTAKP*MHLPQH
Trigger: GTGCTGAGGAAGATGCATCAAGGGCTTGGCTGTGCC...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACGAAGTGTCACCTACTaGTTCAGTCGAATGGCATAT +
Preference number: 5 (lower is better)
Translates to: PVCPGIPVSRKRHCTLLQRSVTY*FSRMAY
Trigger: ATATGCCATTCGACTGAACAAGTAGGTGACACTTCG...TTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645504.1
CDS TCA 90 bp CCACTGCTTTCAGCAGTCTTAGAAATCTGTGAGAGAGGTAGGTGCTaGACGTGCACACAACATTTAATTCTGCTGTTATCAAGCAATGGG +
Preference number: 5 (lower is better)
Translates to: PLLSAVLEICERGRC*TCTQHLILLLSSNG
Trigger: CCCATTGCTTGATAACAGCAGAATTAAATGTTGTGTGCACGTTCAGCACCTACCTCTCTCACAGATTTCTAAGACTGCTGAAAGCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460485.1
ENST00000494464.5
ENST00000646042.1
CDS CCA 90 bp ATGGGGATAACTTACTACAAGGGCTCCCTATCCCTGCAGAAAACTTaGGTTGATTCTGTAAAGGGAATTCTCCTTCCCTCCAATTCTCAT +
Preference number: 5 (lower is better)
Translates to: MGITYYKGSLSLQKT*VDSVKGILLPSNSH
Trigger: ATGAGAATTGGAGGGAAGGAGAATTCCCTTTACAGAATCAACCCAAGTTTTCTGCAGGGATAGGGAGCCCTTGTAGTAAGTTATCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 90 bp TCTCGGATCACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTATCTTAATAAACTGCATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: SRITGSWRRCWITSG*QLSTKYLNKLHNSI
Trigger: GATGGAATTATGCAGTTTATTAAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646654.1
CDS CCA 90 bp TTTCTTAAGCGGCATTCTCGGATCACGGGGTCCTGGAGAAGATGCTaGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTTAATAAA +
Preference number: 5 (lower is better)
Translates to: FLKRHSRITGSWRRC*ITSGWQLSTKYLNK
Trigger: TTTATTAAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTTAGGCCCAATCAGAAAATTTAAATCCACAATTTTGTCATCTTCGCGGACGCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: SLGPIRKFKSTILSSSRTPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...CGTCCGCGAAGATGACAAAATTGTGGATTTAAATTTTCTGATTGGGCCTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTCTTCCCATATTCATCCACTTaGGTGCCTGACTCATCCACC +
Preference number: 5 (lower is better)
Translates to: FLNHFLLDFKRHCLCLFFPYSST*VPDSST
Trigger: GGTGGATGAGTCAGGCACCAAAGTGGATGAATATGG...GAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTGTGTGTCCTTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: DLPRISAAWLSKPFPVCPFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...AGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AATGGCAGATTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: NGRFACESLCDELSGLPFSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...GAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCAAGCTCTAAATTTGTaGGGGTTCATGGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLQALNL*GFMVYS
Trigger: GCTGTACACCATGAACCCCAACAAATTTAGAGCTTG...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CACAATTCAGTCCCCAGCACACTCACTTTGGGCTGCATTTCCAAATTCTCCCTGTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: HNSVPSTLTLGCISKFSLFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...CAGGGAGAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGGGACTGAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS-3UTR CAA 90 bp TTTGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCAGAGTTTCTGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FACESLCDELSGLPFRVSVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...AGAAACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTTGAAGCTATAACCTTGATCGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FLLHASEFRDHLEAITLIVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...GATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCCTTTCCCCCTGAGACGTAGGTCCGTAGATATAGGGTTTGTTCAGTCGAATGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HPFPLRRRSVDIGFVQSNVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...ATTCGACTGAACAAACCCTATATCTACGGACCTACGTCTCAGGGGGAAAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTATCTCTGCCGCTTGGTaGAGTAAGCCATTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KLASSKFVGVHGVQQDSFISAAW*SKPFPV
Trigger: CACAGGAAATGGCTTACTCAACCAAGCGGCAGAGAT...AAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTGCTGTTGCTCTTCTTTaGTCGAAAACGCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PFPVCPGIPVSRKRHCTLAVALL*SKTPSL
Trigger: AAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGC...AAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTCATTTCCTAAAGCGCTaGAAGAGCGGGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFHFLKR*KSGCTC
Trigger: ACATGTACACCCGCTCTTCAAGCGCTTTAGGAAATG...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TGGAGTTCCTCAATCATTTCCTGCTTGACTTCAAAAGACACTGTCTGTGTCTCTTGGACCACCTTCCCATaGTGTACTCACATGACAAGA +
Preference number: 5 (lower is better)
Translates to: WSSSIISCLTSKDTVCVSWTTFP*CTHMTR
Trigger: TCTTGTCATGTGAGTACACAATGGGAAGGTGGTCCA...AGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645233.1
CDS GCA 90 bp ATAACTGCCACTGTTGTCAAGGATGTGGAAAAACTAGAACCCGCATaGATTGCTGTTGAGAATGTAAATGATGCGGCTGCTTTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: ITATVVKDVEKLEPA*IAVENVNDAAALEN
Trigger: GTTTTCCAAAGCAGCCGCATCATTTACATTCTCAACAGCAATGCATGCGGGTTCTAGTTTTTCCACATCCTTGACAACAGTGGCAGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS-3UTR CAA 90 bp AACTTGATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCTCAACGAAGTATCTGTaGTGCTTCAAGACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: NLIRNWQALNLLGFMVYSSTKYL*CFKTSL
Trigger: CAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGA...GCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
CDS-3UTR CAA 90 bp AAGCCATTTCCTGTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: KPFPVCPGIPVSRKRHCTFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...AGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACACAGGAAATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AAGAGCTGCTGTTGCTCTTCTTTTGTCGAAAACGCCAAGTCTTCCTCCTCCATGTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: KSCCCSSFVENAKSSSSMFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...CATGGAGGAGGAAGACTTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GGTCCTGGAGAAGATGCTGGATTACATCAGGGTGGCAACTTTCAACGAAGTATCAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: GPGEDAGLHQGGNFQRSIKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...GATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
CDS-3UTR CAA 90 bp GAGGACATTTGCTTCCGGCAGATCAAACGAAGTGTCACCTACCTTGGATATGAACTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: EDICFRQIKRSVTYLGYELEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...TTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCAAATGTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGAGCCACCAAGAAGTCTaGGGCATATTTGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQSHQEV*GIFVNW
Trigger: CCAGTTTACAAATATGCCCAAGACTTCTTGGTGGCT...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AACGAAGTGTCACCTACCTTGGATATGAAGATGGTGTTAATTTTGGGGTTGTGCTTTAAATCCACAATTTaGTCATCTTCGCGGACGAGG +
Preference number: 5 (lower is better)
Translates to: NEVSPTLDMKMVLILGLCFKSTI*SSSRTR
Trigger: CCTCGTCCGCGAAGATGACAAAATTGTGGATTTAAA...GCACAACCCCAAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCAAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCGTTTCTTGGTTTTGATTGCCACATATTCCCGGTAAAATTCAGGAGACATAGGTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SFLGFDCHIFPVKFRRHRWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...CCTATGTCTCCTGAATTTTACCGGGAATATGTGGCAATCAAAACCAAGAAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTCAGTGGCAAGCTCTAAATTaGTTGGGGTTCATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: YRVCSVEWHIPLGQTHCQWQALN*LGFMVY
Trigger: GTACACCATGAACCCCAACAAATTTAGAGCTTGCCA...CTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp GTGTGTCCTGGGATACCAGTGAGTAGAAAAAGGCATTGTACTCTTCTGCAACCATTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: VCPGIPVSRKRHCTLLQPFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...TGGTTGCAGAAGAGTACAATGCCTTTTTCTACTCACTGGTATCCCAGGACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ACTAATCATAGCGGATCACGACCTCATTTAGTCTTAACTACTTTCTTACTCCAACCCAGCACACTCACTTaGGGCTGCATTTCCAAATTC +
Preference number: 5 (lower is better)
Translates to: TNHSGSRPHLVLTTFLLQPSTLT*GCISKF
Trigger: GAATTTGGAAATGCAGCCCAAAGTGAGTGTGCTGGG...TTGGAGTAAGAAAGTAGTTAAGACTAAATGAGGTCGTGATCCGCTATGATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642308.1
ENST00000645233.1
CDS GCA 90 bp CCACACCAGTATTACTACAACTCCACAGAGTATGTGCACAGTAATTaGGGCTTAAATAAAATGCAAAGCCTCTTCACCAATGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: PHQYYYNSTEYVHSN*GLNKMQSLFTNAPI
Trigger: AATAGGAGCATTGGTGAAGAGGCTTTGCATTTTATTTAAGCCGCAATTACTGTGCACATACTCTGTGGAGTTGTAGTAATACTGGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646042.1
CDS-3UTR CAA 90 bp GATCAGAAACTGGCAAGCTCTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTTCATCCTTGTCCATTaGCTCATAGAAGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: DQKLASSKFVGVHGVQQDFILVH*LIEVKQ
Trigger: CTGTTTGACTTCTATGAGCAAATGGACAAGGATGAA...ATCTTGCTGTACACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGTGTTAATTTTGGGGTaGTGCTTGAAATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LLLLHPCPFAHRSQTGPWVLILG*CLKFWR
Trigger: TCTCCAGAATTTCAAGCACAACCCCAAAATTAACAC...CCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTAAGATGGTGTTAATTTaGGGGTTGTGCTTGAAATTC +
Preference number: 5 (lower is better)
Translates to: HPCPFAHRSQTGPWGCQIKMVLI*GLCLKF
Trigger: GAATTTCAAGCACAACCCCAAAATTAACACCATCTT...AATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGGAAGTGTCACCTACCTaGGATATGAAGATGGTGTTA +
Preference number: 5 (lower is better)
Translates to: LTVHNLINCIIPSGTPVLEVSPT*DMKMVL
Trigger: TAACACCATCTTCATATCCAAGGTAGGTGACACTTC...CAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp AGCTATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: SYNLDLPRISAAWLSKPFLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...AAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TATAACCTTGATCTACCAAGAATCTCTGCCGCTTGGTTGAGTAAGCCATTTCCTAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: YNLDLPRISAAWLSKPFPSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...AGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTGGTAGATCAAGGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645504.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp ATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTCCATGGGGATGTCAGATTTTTTAGGGCAAACACATaGTCAGCAAAGACAATAATC +
Preference number: 5 (lower is better)
Translates to: ILVHLLIEVKQVHGDVRFFRANT*SAKTII
Trigger: GATTATTGTCTTTGCTGACAATGTGTTTGCCCTAAA...AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: LTVHNLINCIIPSGTPVLLEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...CAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS TCA 90 bp AGTCTGGCAGTTCATCAAAATGTTAAACACACTGTTATAACCACATaGCCTGGCAATTCCACTTCCAGGCATAAATCCAAGAGAAATGAA +
Preference number: 5 (lower is better)
Translates to: SLAVHQNVKHTVITT*PGNSTSRHKSKRNE
Trigger: TTCATTTCTCTTGGATTTATGCCTGGAAGTGGAATTGCCAGGTCATGTGGTTATAACAGTGTGTTTAACATTTTGATGAACTGCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS-3UTR CAA 90 bp AGATATAGGGTTTGTTCAGTCGAATGGCATATTCCTTTAGGGCAAACACATTGTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: RYRVCSVEWHIPLGQTHCSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...ACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp TCTCTTCTTCTTCTTCTTCATCCTTGTCCATTTGCTCATAGAAGTCAAACAGGTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: SLLLLLHPCPFAHRSQTGSIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...ACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAAGAAGAAGAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTGACAGTACACAACTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTTGAGCAAGATTCGTTTCTaGGTTTTGATTGCCACATAT +
Preference number: 5 (lower is better)
Translates to: LTVHNLINCIIPSGTPVLSKIRF*VLIATY
Trigger: ATATGTGGCAATCAAAACCAAGAAACGAATCTTGCT...CAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS-3UTR CAA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTTCAATCATTTCCTGCTaGACTTCAAAAGACACTGTC +
Preference number: 5 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLISIISC*TSKDTV
Trigger: GACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGA...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS-3UTR CAA 90 bp CTAAATTTGTTGGGGTTCATGGTGTACAGCAAGATTCGTTTCTTGGTTTTGATTCTTGAAGCTATAACCTaGATCTACCAAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: LNLLGFMVYSKIRFLVLILEAIT*IYQESL
Trigger: CAGAGATTCTTGGTAGATCAAGGTTATAGCTTCAAG...AATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000426778.5
ENST00000445889.5
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000645736.1
ENST00000646654.1
CDS GCA 72 bp AGCATCTCTCCCGCCCAAAGGCCTGTCCCAACGGGGTaGGCGCGGGAGGGCCAGCAGGGTCGGCCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: SISPAQRPVPTG*AREGQQGRPAQ
Trigger: CTGCGCCGGCCGACCCTGCTGGCCCTCCCGCGCGCACCCCGTTGGGACAGGCCTTTGGGCGGGAGAGATGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426778.5
ENST00000445889.5
CDS GCA 72 bp CCCTCACCCGTCTCCCCTAGGCCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: PSPVSPRPSSLG*AQVQHLSRPKA
Trigger: GGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGGTGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445889.5
CDS GCA 72 bp TTCTTGTCCGTCTCCCCTAGGCCGAGTTCGCTGGGCTaGGCCCAGGTCCAGCATCTCTCCCGCCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: FLSVSPRPSSLG*AQVQHLSRPKA
Trigger: GGCCTTTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGACAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS CCA 72 bp GTTTGCAGCCCAACGCTGACAGCACCCAGAGGGGCCTaGAGGTGTGGTCGTCCTTCAGCGGCATTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: VCSPTLTAPRGA*RCGRPSAAFAA
Trigger: GGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGCTGTCAGCGTTGGGCTGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462306.5
ENST00000490062.1
ENST00000494464.5
ENST00000644317.1
CDS CCA 72 bp ATTTCTTCTTGTCCGTCTCCCCTAGGCCGAGTTCGCTaGGCTGCGCCCAGGTCCAGCATCTCTCCCGCCCAA +
Preference number: 6 (lower is better)
Translates to: ISSCPSPLGRVR*AAPRSSISPAQ
Trigger: TTGGGCGGGAGAGATGCTGGACCTGGGCGCAGCCCAGCGAACTCGGCCTAGGGGAGACGGACAAGAAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426778.5
CDS CCA 72 bp TGGAAGGCACAGGCTGTGGCCCTTTGTGAAGGTCCCTaGCATCTGCTGTGCTCCGCAACTGGGGCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: WKAQAVALCEGP*HLLCSATGASS
Trigger: GCTGGAAGCCCCAGTTGCGGAGCACAGCAGATGCCAGGGACCTTCACAAAGGGCCACAGCCTGTGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp CTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTTaGAGCCCAACGCTGACAGCACCCAGAGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LSFLRYSVMSLV*SPTLTAPRGAW
Trigger: CCAGGCCCCTCTGGGTGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462306.5
ENST00000490062.1
ENST00000494464.5
ENST00000644317.1
CDS GCA 72 bp GTCCTTCTGGGCCAGGGATCCAGAGTACAGACGATGTaGACATCTGCCCAGGCCCAGCCACTCCACGTCATG +
Preference number: 6 (lower is better)
Translates to: VLLGQGSRVQTM*TSAQAQPLHVM
Trigger: CATGACGTGGAGTGGCTGGGCCTGGGCAGATGTGCACATCGTCTGTACTCTGGATCCCTGGCCCAGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp CACAGGCTGTGGCCCTTTGTGAAGGTCCCTGGCATCTaGTGTGCTCCGCAACTGGGGCTTCCAGCAGGAATG +
Preference number: 6 (lower is better)
Translates to: HRLWPFVKVPGI*CAPQLGLPAGM
Trigger: CATTCCTGCTGGAAGCCCCAGTTGCGGAGCACAGCAGATGCCAGGGACCTTCACAAAGGGCCACAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 72 bp GCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTaGCAGCCCAACGCTGACAGCACCCAGAGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: AELPEVLGDVTG*QPNADSTQRGL
Trigger: CAGGCCCCTCTGGGTGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462306.5
ENST00000490062.1
ENST00000494464.5
ENST00000644317.1
CDS GCA 72 bp AGGCAGGAGAATCCCTTGAACCTGCGAGGCAGTGGTTaGAGTGAGCCAAGATCGCCCCACTGTACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENPLNLRGSG*SEPRSPHCTPA
Trigger: GGCTGGAGTACAGTGGGGCGATCTTGGCTCACTGCAACCACTGCCTCGCAGGTTCAAGGGATTCTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp CACAGTGCTGGTCATAGTGCCATGGCACCTCAGTCCTaGCAGGACGGCACACTTTCCACCAACAGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: HSAGHSAMAPQS*QDGTLSTNSCP
Trigger: AGGGCAGCTGTTGGTGGAAAGTGTGCCGTCCTGGCAGGACTGAGGTGCCATGGCACTATGACCAGCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS GCA 72 bp ACGAGGGTCGCAGTCAAACCCAGCTTACAGTGGGCCTaGACGATGGTGAGCACCCTTCGGAACATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TRVAVKPSLQWA*TMVSTLRNILA
Trigger: GGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTGCGACCCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647169.1
CDS CAA 90 bp CAGCACCCAGAGGGGCCTGGAGGTGTGGTCGTCCTTCAGCGGCATTaGCAGCCTGTAGTCCTTGGCTCCATATTCATCCACTTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: QHPEGPGGVVVLQRH*QPVVLGSIFIHFGA
Trigger: GGCACCAAAGTGGATGAATATGGAGCCAAGGACTACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462306.5
ENST00000490062.1
ENST00000494464.5
ENST00000644317.1
CDS CAA 90 bp CCTGCCCCCACCCAAGGGTGGCCCAGGAGTCCACATACGGCAGATTaGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCCTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: PAPTQGWPRSPHTAD*LVKVSVMSSVASPS
Trigger: TGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCGTATGTGGACTCCTGGGCCACCCTTGGGTGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460485.1
ENST00000494464.5
ENST00000646042.1
CDS TCA 72 bp ACGCCAAGTCTTCCTCCTCCATGCCAGCGAGTTTCGTaGTCACCTGCAAAGCCCAAGCCAGCAGACATGCCC +
Preference number: 6 (lower is better)
Translates to: TPSLPPPCQRVS*SPAKPKPADMP
Trigger: GGGCATGTCTGCTGGCTTGGGCTTTGCAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGACTTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp GCCACTCCACGTCATGACTCTGGGAACTCCAACCACTaGTCCTCAACAGGCAGCACCGAAGACACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ATPRHDSGNSNH*SSTGSTEDTAP
Trigger: TGGAGCTGTGTCTTCGGTGCTGCCTGTTGAGGAGCAGTGGTTGGAGTTCCCAGAGTCATGACGTGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp AGGAAGAGCTCTCCTAGCTACCTAGAGAGGCATCCCTaGGAAAGCAGCCCTGCGGGGCTCAGATTCACACAG +
Preference number: 6 (lower is better)
Translates to: RKSSPSYLERHP*ESSPAGLRFTQ
Trigger: CTGTGTGAATCTGAGCCCCGCAGGGCTGCTTTCTCAGGGATGCCTCTCTAGGTAGCTAGGAGAGCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS GCA 72 bp TCTTCCTCCTCCATGCCAGCGAGTTTCGTGATCACCTaGAAAGCCCAAGCCAGCAGACATGCCCCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: SSSSMPASFVIT*KAQASRHAPFC
Trigger: GCAGAAAGGGGCATGTCTGCTGGCTTGGGCTTTGCAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp CAGTCAAACCCAGCTTACAGTGGGCCTGCACGATGGTaGGCACCCTTCGGAACATCTTGGCCTTGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: QSNPAYSGPARW*APFGTSWPWVS
Trigger: TGAAACCCAAGGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCCCACTGTAAGCTGGGTTTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647169.1
CDS CAA 72 bp ACCCAAGGGTGGCCCAGGAGTCCACATACGGCAGATTaGCTTGTGAAAGTCTCTGTGATGAGCTCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: TQGWPRSPHTAD*LVKVSVMSSVA
Trigger: GGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCGTATGTGGACTCCTGGGCCACCCTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460485.1
ENST00000494464.5
ENST00000646042.1
CDS TCA 72 bp AAGTATCTGCAAGCAGGGGAGGAAGAAGGGGTCTACTaGCCAGCAGGTACCTCCTGGAGATTCCACTGCTCA +
Preference number: 6 (lower is better)
Translates to: KYLQAGEEEGVY*PAGTSWRFHCS
Trigger: TGAGCAGTGGAATCTCCAGGAGGTACCTGCTGGTCAGTAGACCCCTTCTTCCTCCCCTGCTTGCAGATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS GCA 72 bp CTCAAATCCCTCAGATGGCTTCACACTGGTATGGTGTaGACTTCATCCAGGATCATGAGGCCCCACTCCTGG +
Preference number: 6 (lower is better)
Translates to: LKSLRWLHTGMV*TSSRIMRPHSW
Trigger: CCAGGAGTGGGGCCTCATGATCCTGGATGAAGTGCACACCATACCAGTGTGAAGCCATCTGAGGGATTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS CCA 72 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTATCTGCAAGCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: TGSWRRCWITSG*QLSTKYLQAGE
Trigger: CTCCCCTGCTTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS CAA 90 bp ACGGCATGGCATTGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATaGCTCTTTCTGACCTGGTGCTCCTCTTACCCTCACAGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: TAWHCAFLSRSPFKE*LFLTWCSSYPHSSA
Trigger: TGCCGAGCTGTGAGGGTAAGAGGAGCACCAGGTCAGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp GGATTACATCAGGGTGGCAACTTTCAACGAAGTATCTaGAAGCAGGGGAGGAAGAAGGGGTCTACTGACCAG +
Preference number: 6 (lower is better)
Translates to: GLHQGGNFQRSI*KQGRKKGSTDQ
Trigger: CTGGTCAGTAGACCCCTTCTTCCTCCCCTGCTTGCAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462306.5
ENST00000643982.1
ENST00000646042.1
CDS GCA 72 bp CAAGGGTGCCAAGCGCCGGTCTTGAACGAAGTACCCTaGCTAAGCATCATTTCCTGCTTGACTTCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: QGCQAPVLNEVP*LSIISCLTSKD
Trigger: GTCTTTTGAAGTCAAGCAGGAAATGATGCTTAGGCAGGGTACTTCGTTCAAGACCGGCGCTTGGCACCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647496.1
CDS CCA 72 bp CTTCATCATCCTCTTCATCCTCATAGTGCCGCTTCCTaGATTTCTTCTTGTCGCGGTCCGCTCGGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LHHPLHPHSAAS*ISSCRGPLGLF
Trigger: AAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAGGATGAAGAGGATGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000285398.7
ENST00000462306.5
ENST00000490062.1
ENST00000494464.5
ENST00000642308.1
ENST00000644317.1
ENST00000645233.1
ENST00000645467.1
ENST00000646654.1
ENST00000647169.1
CDS CCA 72 bp TCATGCTCTGCTCAAATCCCTCAGATGGCTTCACACTaGTATGGTGTGCACTTCATCCAGGATCATGAGGCC +
Preference number: 6 (lower is better)
Translates to: SCSAQIPQMASH*YGVHFIQDHEA
Trigger: GGCCTCATGATCCTGGATGAAGTGCACACCATACCAGTGTGAAGCCATCTGAGGGATTTGAGCAGAGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645467.1
CDS CAA 72 bp AGAGACCAGCATCAGGAGCCGCCTTTAACAGGGAGCTaGACTAATGATCTCAAGACCAGAGGGATGCAGGAA +
Preference number: 6 (lower is better)
Translates to: RDQHQEPPLTGS*TNDLKTRGMQE
Trigger: TTCCTGCATCCCTCTGGTCTTGAGATCATTAGTCAAGCTCCCTGTTAAAGGCGGCTCCTGATGCTGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp AGCTCCACTGCTAGAGGAAATACAGTGGCCAGTGGATaGGTTTCCAGTCTGGGCCACATCTCTTGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSTARGNTVASG*VSSLGHISCFS
Trigger: AGAGAAACAAGAGATGTGGCCCAGACTGGAAACTCATCCACTGGCCACTGTATTTCCTCTAGCAGTGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462306.5
ENST00000646042.1
CDS GCA 72 bp GCAGGGCAGGTGGAATTGCTGGTCTCAGCTGTCACTTaGCTTAATAAACTGCATAATTCCATCAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: AGQVELLVSAVT*LNKLHNSIRDS
Trigger: GGAGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS CCA 72 bp GATTTTAAAAGGCTCCTTCGGGTAGCCTTCACATCTTaGAGCAGACAAAGGAAGGGACAAGTGACTGGAAGG +
Preference number: 6 (lower is better)
Translates to: DFKRLLRVAFTS*SRQRKGQVTGR
Trigger: CCTTCCAGTCACTTGTCCCTTCCTTTGTCTGCTCCAAGATGTGAAGGCTACCCGAAGGAGCCTTTTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 90 bp CAGCTCCAACCAACACAAACTACTACGGCATGGCATTGTGCCTTTTaGTCGAGGTCACCTTTCAAAGAATTGCTCTTTCTGACCTGGTGC +
Preference number: 6 (lower is better)
Translates to: QLQPTQTTTAWHCAF*SRSPFKELLFLTWC
Trigger: GCACCAGGTCAGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGGTTGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 90 bp TCACTTGCCTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLALINCIIPSGTPV*LSFLRYSVMSLVCS
Trigger: GCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS CAA 90 bp CGAAGTATCTTAATAAACTGCATAATTCCATCAGGGACTCCAGTCTaGCTGAGCTTCCTGAGGTACTCGGTGATGTCACTGGTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSILINCIIPSGTPV*LSFLRYSVMSLVCS
Trigger: GCTGCAAACCAGTGACATCACCGAGTACCTCAGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGATACTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646654.1
CDS TCA 72 bp CTACAAGGGCTCCCTATCCCTGCAGAAAACTTGGGTTaGTTCTGTAAAGGGAATTCTCCTTCCCTCCAATTC +
Preference number: 6 (lower is better)
Translates to: LQGLPIPAENLG*FCKGNSPSLQF
Trigger: GAATTGGAGGGAAGGAGAATTCCCTTTACAGAATCAACCCAAGTTTTCTGCAGGGATAGGGAGCCCTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 72 bp ACTTACTACAAGGGCTCCCTATCCCTGCAGAAAACTTaGGTTGATTCTGTAAAGGGAATTCTCCTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: TYYKGSLSLQKT*VDSVKGILLPS
Trigger: GGAGGGAAGGAGAATTCCCTTTACAGAATCAACCCAAGTTTTCTGCAGGGATAGGGAGCCCTTGTAGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 72 bp CATTGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATaGCTCTTTCTGACCTGGTGCTCCTCTTACCCTCAC +
Preference number: 6 (lower is better)
Translates to: HCAFLSRSPFKE*LFLTWCSSYPH
Trigger: GTGAGGGTAAGAGGAGCACCAGGTCAGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 90 bp ACCGAAGACACAGCTCCAACCAACACAAACTACTACGGCATGGCATaGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATTGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: TEDTAPTNTNYYGMA*CLFVEVTFQRIALS
Trigger: AGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGGTTGGAGCTGTGTCTTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 90 bp CATGGAGCACCTATGCCTATTGTTACATTAGCAGGGCAGGTGGAATaGCTGGTCTCAGCTGTCACTTGCCTTAATAAACTGCATAATTCC +
Preference number: 6 (lower is better)
Translates to: HGAPMPIVTLAGQVE*LVSAVTCLNKLHNS
Trigger: GGAATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGACCAGCAATTCCACCTGCCCTGCTAATGTAACAATAGGCATAGGTGCTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS GCA 72 bp AAGAAACCAGTCACAGAAGGCCCCAAGTGGTCTGACTaGATTTACATGAAATGTCCAGAAAAGGCCTACAGA +
Preference number: 6 (lower is better)
Translates to: KKPVTEGPKWSD*IYMKCPEKAYR
Trigger: TCTGTAGGCCTTTTCTGGACATTTCATGTAAATGCAGTCAGACCACTTGGGGCCTTCTGTGACTGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp AATTGCTGGTCTCAGCTGTCACTTGCCTTAATAAACTaGATAATTCCATCAGGGACTCCAGTCTTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: NCWSQLSLALIN*IIPSGTPVLLS
Trigger: GCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGGCAAGTGACAGCTGAGACCAGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490062.1
ENST00000642308.1
ENST00000645233.1
CDS CCA 72 bp AAGACACAGCTCCAACCAACACAAACTACTACGGCATaGCATTGTGCCTTTTTGTCGAGGTCACCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: KTQLQPTQTTTA*HCAFLSRSPFK
Trigger: TTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGGTTGGAGCTGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp TCACAGAAGGCCCCAAGTGGTCTGACTGCATTTACATaGAATGTCCAGAAAAGGCCTACAGACATCAAAGTA +
Preference number: 6 (lower is better)
Translates to: SQKAPSGLTAFT*NVQKRPTDIKV
Trigger: TACTTTGATGTCTGTAGGCCTTTTCTGGACATTTCATGTAAATGCAGTCAGACCACTTGGGGCCTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS GCA 72 bp ACTGTTGTCAAGGATGTGGAAAAACTAGAACCCGCATaGATTGCTGTTGAGAATGTAAATGATGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: TVVKDVEKLEPA*IAVENVNDAAA
Trigger: AGCAGCCGCATCATTTACATTCTCAACAGCAATGCATGCGGGTTCTAGTTTTTCCACATCCTTGACAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 72 bp ACGGGGTCCTGGAGAAGATGCTGGATTACATCAGGGTaGCAACTTTCAACGAAGTATCTTAATAAACTGCAT +
Preference number: 6 (lower is better)
Translates to: TGSWRRCWITSG*QLSTKYLNKLH
Trigger: ATGCAGTTTATTAAGATACTTCGTTGAAAGTTGCCACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646654.1
CDS CAA 72 bp CCAACACAAACTACTACGGCATGGCATTGTGCCTTTTaGTCGAGGTCACCTTTCAAAGAATTGCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PTQTTTAWHCAF*SRSPFKELLFL
Trigger: CAGAAAGAGCAATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 72 bp ACAGCTCCAACCAACACAAACTACTACGGCATGGCATaGTGCCTTTTTGTCGAGGTCACCTTTCAAAGAATT +
Preference number: 6 (lower is better)
Translates to: TAPTNTNYYGMA*CLFVEVTFQRI
Trigger: AATTCTTTGAAAGGTGACCTCGACAAAAAGGCACAATGCCATGCCGTAGTAGTTTGTGTTGGTTGGAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 90 bp GAACCCGCATGCATTGCTGTTGAGAATGTAAATGATGCGGCTGCTTaGGAAAACAGTCTGGCAGTTCATCAAAATGTTAAACACACTGTT +
Preference number: 6 (lower is better)
Translates to: EPACIAVENVNDAAA*ENSLAVHQNVKHTV
Trigger: AACAGTGTGTTTAACATTTTGATGAACTGCCAGACTGTTTTCCAAAGCAGCCGCATCATTTACATTCTCAACAGCAATGCATGCGGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp TCAGCAGTCTTAGAAATCTGTGAGAGAGGTAGGTGCTaGACGTGCACACAACATTTAATTCTGCTGTTATCA +
Preference number: 6 (lower is better)
Translates to: SAVLEICERGRC*TCTQHLILLLS
Trigger: TGATAACAGCAGAATTAAATGTTGTGTGCACGTTCAGCACCTACCTCTCTCACAGATTTCTAAGACTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460485.1
ENST00000494464.5
ENST00000646042.1
CDS TCA 72 bp GATAGGATATCAGGAAGATTATTTATAGAGCTTCTCTaGGAGAGTAAGAACAGCATGGTGGAGACTGGGTTT +
Preference number: 6 (lower is better)
Translates to: DRISGRLFIELL*ESKNSMVETGF
Trigger: AAACCCAGTCTCCACCATGCTGTTCTTACTCTCTCAGAGAAGCTCTATAAATAATCTTCCTGATATCCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 72 bp TTTTACTTTAGGGAAACCCAACTTGCAATCCTAAAGTaGTCAGATGTGCCTAAACTGAGCTTTTTCCATTGG +
Preference number: 6 (lower is better)
Translates to: FYFRETQLAILK*SDVPKLSFFHW
Trigger: CCAATGGAAAAAGCTCAGTTTAGGCACATCTGACCACTTTAGGATTGCAAGTTGGGTTTCCCTAAAGTAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460485.1
ENST00000646042.1
CDS TCA 72 bp GTTCATCAAAATGTTAAACACACTGTTATAACCACATaGCCTGGCAATTCCACTTCCAGGCATAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: VHQNVKHTVITT*PGNSTSRHKSK
Trigger: CTTGGATTTATGCCTGGAAGTGGAATTGCCAGGTCATGTGGTTATAACAGTGTGTTTAACATTTTGATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CCA 72 bp AGAACCCTCCATCTATCCCCAAAATATAAAGCCCTCTaGACACCAAATACTGACATAAACGTAATATTTGTG +
Preference number: 6 (lower is better)
Translates to: RTLHLSPKYKAL*TPNTDINVIFV
Trigger: CACAAATATTACGTTTATGTCAGTATTTGGTGTCCAGAGGGCTTTATATTTTGGGGATAGATGGAGGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS CAA 72 bp TGCATTGCTGTTGAGAATGTAAATGATGCGGCTGCTTaGGAAAACAGTCTGGCAGTTCATCAAAATGTTAAA +
Preference number: 6 (lower is better)
Translates to: CIAVENVNDAAA*ENSLAVHQNVK
Trigger: TTTAACATTTTGATGAACTGCCAGACTGTTTTCCAAAGCAGCCGCATCATTTACATTCTCAACAGCAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491292.5
CDS TCA 72 bp TTGTGTAACAGGAAAGAAAGCAAATGCCTCAGCCAGTaGAAGTTAGCCAAAGCTTTAGAATTTCCCAATTAT +
Preference number: 6 (lower is better)
Translates to: LCNRKESKCLSQ*KLAKALEFPNY
Trigger: ATAATTGGGAAATTCTAAAGCTTTGGCTAACTTTCACTGGCTGAGGCATTTGCTTTCTTTCCTGTTACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491292.5
ENST00000642972.1
CDS TCA 72 bp CTAAACATGAATTGTGTTGATAGTTGCACAACTTTGTaGATATTGTATTTCCTAGGTTTTCTTCGAGGATCC +
Preference number: 6 (lower is better)
Translates to: LNMNCVDSCTTL*ILYFLGFLRGS
Trigger: GGATCCTCGAAGAAAACCTAGGAAATACAATATTCACAAAGTTGTGCAACTATCAACACAATTCATGTTTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491292.5