RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPOR (Homo sapiens)

Ensembl gene IDs: ENSG00000187266

Ensembl transcript IDs: ENST00000222139.11, ENST00000586890.5, ENST00000588681.5, ENST00000588859.5, ENST00000589402.1, ENST00000590927.1, ENST00000591958.5, ENST00000592375.6

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACGCGCGCGGACGGCGAAGGTGTAGCGCGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCCTCT +
Preference number: 1 (lower is better)
Translates to: YARGRRRCSASGPAG*SAHTRCGPPGSPPS
Trigger: AGAGGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTCGCCGTCCGCGCGCGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CCA 90 bp CGTTGCCGGCCGAGACGTCCACCTCGTAGCGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGC +
Preference number: 1 (lower is better)
Translates to: RCRPRRPPRSGCETS*VSQAAGASATLRGR
Trigger: GCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTCTCACATCCGCTACGAGGTGGACGTCTCGGCCGGCAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR GCA 90 bp TGCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCTCGTAGCGGATGTGAGACGTCATGG +
Preference number: 1 (lower is better)
Translates to: CGPPGSPPSVRSLRR*RPRRPPRSGCETSW
Trigger: CCATGACGTCTCACATCCGCTACGAGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR TCA 90 bp AGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCCACCACAGGCAGCCATCATTCTGGT +
Preference number: 1 (lower is better)
Translates to: SSALRGLPGKQVGPP*RGCRGSTTGSHHSG
Trigger: ACCAGAATGATGGCTGCCTGTGGTGGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR CCA 90 bp TGGCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGG +
Preference number: 1 (lower is better)
Translates to: WPLCPHCHQALGGPH*AGSGAATICPAPDR
Trigger: CCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR CCA 90 bp TTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTaGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGC +
Preference number: 1 (lower is better)
Translates to: FVQHQIGILGMLTAH*LQQGALIICPRLHC
Trigger: GCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR TCA 90 bp ACGGGGGCGTCTAGGAGCACTACTTCATTGATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAGGCTGCTGTGACGCGCAACTCTAGG +
Preference number: 1 (lower is better)
Translates to: TGASRSTTSLMWMTR*YRGAPEAAVTRNSR
Trigger: CCTAGAGTTGCGCGTCACAGCAGCCTCCGGCGCTCCGCGATATCACCGTGTCATCCACATCAATGAAGTAGTGCTCCTAGACGCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CCA 90 bp GAAGTTACCCTTGTGGGTGGTGAAGAGGCCTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCG +
Preference number: 1 (lower is better)
Translates to: EVTLVGGEEAFKLAL*ARDARPDLLLQSPA
Trigger: CGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR CCA 90 bp GTTGAGATGCCAGAGTCAGATACCACAAGGTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGC +
Preference number: 1 (lower is better)
Translates to: VEMPESDTTRYRYFR*GGVGGSSGHSVHGR
Trigger: GCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTACCTTGTGGTATCTGACTCTGGCATCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR TCA 90 bp GAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCCTGTTCCATAAGTCTTGAGTCTGCA +
Preference number: 1 (lower is better)
Translates to: EQDGLGRQNQQCPCS*ERPRHPCSISLESA
Trigger: TGCAGACTCAAGACTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR TCA 90 bp CCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTGAGTCATATTGGATCCCTGATCATC +
Preference number: 1 (lower is better)
Translates to: PLLLREASPSLFHKS*VCTGSLSHIGSLII
Trigger: GATGATCAGGGATCCAATATGACTCAGAGAACCAGTGCAGACTCAAGACTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222139.11
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR GCA 90 bp CATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTaGCCTTTTTCTTCCCTTGCTGACTGGCAGTTTGTAGAACAGGGG +
Preference number: 1 (lower is better)
Translates to: HFQARSLKWPIEGHC*PFSSLADWQFVEQG
Trigger: CCCCTGTTCTACAAACTGCCAGTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR GCA 90 bp GCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTaGTGCCCTTTTTCTTCCCTTGCTGACTGGCAGTTTGTAGAACAG +
Preference number: 1 (lower is better)
Translates to: AHFQARSLKWPIEGH*CPFSSLADWQFVEQ
Trigger: CTGTTCTACAAACTGCCAGTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR CCA 90 bp GTGAGAAGAAGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATaGCCCATTGAGGGTCATTGCTGCCCTTTTTCTTCCCTTGCTGAC +
Preference number: 1 (lower is better)
Translates to: VRRREEAHFQARSLK*PIEGHCCPFSSLAD
Trigger: GTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCTTCTTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR CCA 90 bp TGGCCCATTGAGGGTCATTGCTGCCCTTTTTCTTCCCTTGCTGACTaGCAGTTTGTAGAACAGGGGATCCATCTAAGTACCCTAAGAGAA +
Preference number: 1 (lower is better)
Translates to: WPIEGHCCPFSSLAD*QFVEQGIHLSTLRE
Trigger: TTCTCTTAGGGTACTTAGATGGATCCCCTGTTCTACAAACTGCCAGTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR GCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGACCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 2 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp GAAGGTGTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 2 (lower is better)
Translates to: EGVARPAPQVAQHTLGAAPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...GGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp TGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 2 (lower is better)
Translates to: WARDARPDLLLQSPAVGEPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...CTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR GCA 90 bp CAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 2 (lower is better)
Translates to: QRSERTSREAGGSSVKGVRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...CACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 2 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGRAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR TCA 90 bp GGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCACAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 2 (lower is better)
Translates to: GSGCQARSSASEPGGGRAQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...TGCTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp GAAGGTGTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 2 (lower is better)
Translates to: EGVARPAPQVAQHTLGAAMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...GGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp CCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTTTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 2 (lower is better)
Translates to: PASSPSSALRGLPGKQVGFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...ACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp AGGGAGAGCGTCAGGATGAGGGGGTCCAGGTCGCTAGGCGTCAGCAGCGACACACAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 2 (lower is better)
Translates to: RESVRMRGSRSLGVSSDTQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...TGTGTCGCTGCTGACGCCTAGCGACCTGGACCCCCTCATCCTGACGCTCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR GCA 90 bp CGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RSERTSREAGGSSVKGVQAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...CTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR GCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGTCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGSLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 2 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp TGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTTTCCAGGGAAGCAGGTaGGTCCTCCGTGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: WLQQGALIICPRLHCLHRFQGSR*VLREGG
Trigger: ACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAA...ACGATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR GCA 90 bp AAGGGTTGGAGTAGGGGCCATCGGATAAGCCCCCTTGGGCTCCCTGGGAGTCCCTCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: KGWSRGHRISPLGLPGSPSAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...GGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGATGGCCCCTACTCCAACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR GCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSCPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp CAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 2 (lower is better)
Translates to: QRSERTSREAGGSSVKGVQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...CACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp GCCCACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGTGGTACAGCCACAGCTaGAAGTTACCCTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: AHWLQQGALIICPRLHCLWYSHS*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCA...CAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp TTGCTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 2 (lower is better)
Translates to: LLSTHSVRPSRISTLCTLMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...GAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp AAGGGTTGGAGTAGGGGCCATCGGATAAGCCCCCTTGGGCTCCCTGGGAGTCCCAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: KGWSRGHRISPLGLPGSPRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...GGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGATGGCCCCTACTCCAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR TCA 90 bp GATGAGGGGGTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: DEGVQVARRQQRHRLRPGVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...GCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGACCCCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp CTCAGCGGCTGGGATAAGGCTGTTCTCATAAGGGTTGGAGTAGGGGCCATCGGACAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 2 (lower is better)
Translates to: LSGWDKAVLIRVGVGAIGQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...TCCGATGGCCCCTACTCCAACCCTTATGAGAACAGCCTTATCCCAGCCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGAGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 2 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp TGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: WARDARPDLLLQSPAVGEVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...CTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR GCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 2 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKSGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CCA 90 bp CCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PASSPSSALRGLPGKQVGRQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...ACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CCA 90 bp CAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: QRSERTSREAGGSSVKGVRQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...CACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp GAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 2 (lower is better)
Translates to: ERKPISRPDPSNGPLRVIQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...AATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR GCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTACGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 2 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR GCA 90 bp GTTGAGATGCCAGAGTCAGATACCACAAGGTACAGGTACTTTAGGTGGGGTGGGCCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 2 (lower is better)
Translates to: VEMPESDTTRYRYFRWGGPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...CCCACCCCACCTAAAGTACCTGTACCTTGTGGTATCTGACTCTGGCATCTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CCA 90 bp TGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTCTGAGCAGGATGGATTaGGCAGACAAAATCAGCAAT +
Preference number: 2 (lower is better)
Translates to: CHQALGGPHWAGSGAATILSRMD*ADKISN
Trigger: ATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG...AATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR CCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCATGCCCAGGGGAAGATaGGACTTAAAGGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSMPRGR*DLKGVC
Trigger: ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCAT...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR GCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTTATCCCTATGGCCTATaGCCAGGGGAAGATGGGACT +
Preference number: 2 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSYPYGL*PGEDGT
Trigger: AGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATA...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR GCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGCCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: KSAMPLLLREASPSLFHKPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp TGGCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 2 (lower is better)
Translates to: WPLCPHCHQALGGPHWAGVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...ACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp GGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 2 (lower is better)
Translates to: GAAQGTVSMDARAGSWGPVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...TGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR TCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATCCAGCCAGTGAGGTGTaGGAAGAAGAGAGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: TKSAMPLLLREASPSLFHPASEV*EEERKP
Trigger: GGGCTTCCTCTCTTCTTCTCACACCTCACTGGCTGG...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp CTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 2 (lower is better)
Translates to: LPASSPSSALRGLPGKQVVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...CACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGAATACTGCAAGGTTGTaGTTTCCTGAGCAGGATGGA +
Preference number: 2 (lower is better)
Translates to: PQQRSERTSREAGGSSVKNTARL*FPEQDG
Trigger: TCCATCCTGCTCAGGAAACCACAACCTTGCAGTATT...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR CCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp AAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: KRPSNSLSGLGMPGQIFCVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...GCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CCA 90 bp CCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: PASSPSSALRGLPGKQVGFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...ACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR TCA 90 bp GGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GWIGQTKSAMPLLLREASVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...CGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR-3UTR TCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGGTTGTGGTTTCCTaGGCAGGATGGATTGGGCAG +
Preference number: 2 (lower is better)
Translates to: TKSAMPLLLREASPSLFHKVVVS*AGWIGQ
Trigger: CTGCCCAATCCATCCTGCTCAGGAAACCACAACCTT...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR-3UTR TCA 90 bp AAGGGTTGGAGTAGGGGCCATCGGATAAGCCCCCTTGGGCTCCCTGGGAGTCCCTGCAGATCCAGCTTCTaGATAAGCTCAAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: KGWSRGHRISPLGLPGSPCRSSF*ISSRTL
Trigger: TAAAGTTCTTGAGCTTATTCAGAAGCTGGATCTGCA...GGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGATGGCCCCTACTCCAACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR CCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATGCCAGATCCCTCAAATaGCCCATTGAGGGTCATTGC +
Preference number: 2 (lower is better)
Translates to: TKSAMPLLLREASPSLFHARSLK*PIEGHC
Trigger: GCAATGACCCTCAATGGGCCATTTGAGGGATCTGGC...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTACAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 2 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CAA 90 bp ATAAGCCCCCTTGGGCTCCCTGGGAGTCCCCTGAGCTGTAGTCAGTaGAGATGCCAGAGTCAGATACCACAAGGTACAGGTACTTTAGGT +
Preference number: 2 (lower is better)
Translates to: ISPLGLPGSPLSCSQ*RCQSQIPQGTGTLG
Trigger: ACCTAAAGTACCTGTACCTTGTGGTATCTGACTCTGGCATCTCAACTGACTACAGCTCAGGGGACTCCCAGGGAGCCCAAGGGGGCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR TCA 90 bp GAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTGCCAGACTGGAAGAGTCTaGACCTCTGACTCATCCCAT +
Preference number: 2 (lower is better)
Translates to: EAHFQARSLKWPIEGHCCQTGRV*TSDSSH
Trigger: ATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTG...GCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR TCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTATACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 2 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR GCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATCCCATTGAGGGTCATTaGTGCCCTTTTTCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: TKSAMPLLLREASPSLFHPIEGH*CPFSSL
Trigger: AAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGG...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp CCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: PGQQPFVQHQIGILGMLTFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...AGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCATGCCCAGGGGAAGATaGGACTTAAAGGGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSMPRGR*DLKGVC
Trigger: ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCAT...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR-3UTR CCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTAAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLRQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR TCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTTGGTACAGCCACAGCTaGAGAAATAGCACCAACCTG +
Preference number: 2 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCWYSHS*RNSTNL
Trigger: CAGGTTGGTGCTATTTCTTCAGCTGTGGCTGTACCA...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR CCA 90 bp AGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 2 (lower is better)
Translates to: REEAHFQARSLKWPIEGHVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...ATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp AGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTCTGAGCAGGATGGATTaGGCAGACAAAATCAGCAAT +
Preference number: 2 (lower is better)
Translates to: RKPISRPDPSNGPLRVIALSRMD*ADKISN
Trigger: ATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG...AGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR GCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTTATCCCTATGGCCTATaGCCAGGGGAAGATGGGACT +
Preference number: 2 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTYPYGL*PGEDGT
Trigger: AGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATA...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp AGCTACAGACTGGAAGAGTCTGAACCTCTGACTCATCCCATGGATGGCTGCCCATTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: SYRLEESEPLTHPMDGCPFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...TGGGCAGCCATCCATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR TCA 90 bp AGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTTGCAGATCCAGCTTCTaGATAAGCTCAAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: RKPISRPDPSNGPLRVIACRSSF*ISSRTL
Trigger: TAAAGTTCTTGAGCTTATTCAGAAGCTGGATCTGCA...AGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR TCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR TCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCAAAGGTTGTGGTTTCCTaGGCAGGATGGATTGGGCAG +
Preference number: 2 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPKVVVS*AGWIGQ
Trigger: CTGCCCAATCCATCCTGCTCAGGAAACCACAACCTT...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR-3UTR GCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTATTGAGGGTCATTGCTaGCCTTTTTCTTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTIEGHC*PFSSLA
Trigger: AGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAAT...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCAAATACTGCAAGGTTGTaGTTTCCTGAGCAGGATGGA +
Preference number: 2 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPNTARL*FPEQDG
Trigger: TCCATCCTGCTCAGGAAACCACAACCTTGCAGTATT...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR GCA 72 bp GCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGACGTCCACCTCGTAGCG +
Preference number: 3 (lower is better)
Translates to: AALQDLHPLYAP*AVAGRDVHLVA
Trigger: CGCTACGAGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR-3UTR CAA 90 bp TCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGACGCTCCCTGCGCCGTaGCCGGCCGAGACGTCCACC +
Preference number: 3 (lower is better)
Translates to: SLSGLGMPGQIFCFRARRTLPAP*PAETST
Trigger: GGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGT...CCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR GCA 72 bp GCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCACCCTCTGTACGCTCC +
Preference number: 3 (lower is better)
Translates to: ASGPAGCSAHTR*GPPGSPPSVRS
Trigger: GGAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR GCA 72 bp GGACGGCGAAGGTGTAGCGCGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGCGGCCCTCCAGGATCT +
Preference number: 3 (lower is better)
Translates to: GRRRCSASGPAG*SAHTRCGPPGS
Trigger: AGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTCGCCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR GCA 72 bp CCAGGATCTCCACCCTCTGTACGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCTCGTAGCGGATGTGAG +
Preference number: 3 (lower is better)
Translates to: PGSPPSVRSLRR*RPRRPPRSGCE
Trigger: CTCACATCCGCTACGAGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGTGGAGATCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CCA 72 bp TGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCA +
Preference number: 3 (lower is better)
Translates to: CPHCHQALGGPH*AGSGAATICPA
Trigger: TGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CAA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 3 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CCA 72 bp CCGAGACGTCCACCTCGTAGCGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTA +
Preference number: 3 (lower is better)
Translates to: PRRPPRSGCETS*VSQAAGASATL
Trigger: TAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTCTCACATCCGCTACGAGGTGGACGTCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR CCA 72 bp CACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTaGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGG +
Preference number: 3 (lower is better)
Translates to: HQIGILGMLTAH*LQQGALIICPR
Trigger: CCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR-3UTR CAA 90 bp TGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: WLQQGALIICPRLHCLHRSWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCT...ACGATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CAA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQSWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCT...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR TCA 72 bp TCTAGGAGCACTACTTCATTGATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAGGCTGCTGTGACGCGC +
Preference number: 3 (lower is better)
Translates to: SRSTTSLMWMTR*YRGAPEAAVTR
Trigger: GCGCGTCACAGCAGCCTCCGGCGCTCCGCGATATCACCGTGTCATCCACATCAATGAAGTAGTGCTCCTAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
3UTR TCA 72 bp GGTACAGCCACAGCTGGAAGTTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGGA +
Preference number: 3 (lower is better)
Translates to: GTATAGSYPCGW*RGLQTRSLGSG
Trigger: TCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR CCA 72 bp CCAGAGTCAGATACCACAAGGTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGCTCAGGGCACAGTGTC +
Preference number: 3 (lower is better)
Translates to: PESDTTRYRYFR*GGVGGSSGHSV
Trigger: GACACTGTGCCCTGAGCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTACCTTGTGGTATCTGACTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR TCA 72 bp GGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCCTGTTCCATAAGTCTT +
Preference number: 3 (lower is better)
Translates to: GLGRQNQQCPCS*ERPRHPCSISL
Trigger: AAGACTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
3UTR CCA 72 bp TCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCAAACTCGCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: SFWYSHSWKLPL*VVKRPSNSLSG
Trigger: CCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
3UTR-3UTR CAA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGCCTGAGCAGGATGGATaGGGCAGACAAAATCAGCAA +
Preference number: 3 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLPEQDG*GRQNQQ
Trigger: TTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGG...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR-3UTR CAA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTAAAAATACTGCAAGGTaGTGGTTTCCTGAGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSKNTAR*WFPEQD
Trigger: ATCCTGCTCAGGAAACCACAACCTTGCAGTATTTTT...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592375.6
3UTR GCA 72 bp CAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTaGTGCCCTTTTTCTTCCCTTGCTGACTGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: QARSLKWPIEGH*CPFSSLADWQF
Trigger: AAACTGCCAGTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR CCA 72 bp AGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATaGCCCATTGAGGGTCATTGCTGCCCTTTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: REEAHFQARSLK*PIEGHCCPFSS
Trigger: GGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR-3UTR CAA 90 bp AGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTCCTGAGCAGGATGGATaGGGCAGACAAAATCAGCAA +
Preference number: 3 (lower is better)
Translates to: RKPISRPDPSNGPLRVIAPEQDG*GRQNQQ
Trigger: TTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGG...AGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR TCA 72 bp CTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTGAGTCATATTGGATCC +
Preference number: 3 (lower is better)
Translates to: LREASPSLFHKS*VCTGSLSHIGS
Trigger: GGATCCAATATGACTCAGAGAACCAGTGCAGACTCAAGACTTATGGAACAGGGATGGCGAGGCCTCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222139.11
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
3UTR GCA 72 bp GCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTaGCCTTTTTCTTCCCTTGCTGACTGGCAGTTTGTA +
Preference number: 3 (lower is better)
Translates to: ARSLKWPIEGHC*PFSSLADWQFV
Trigger: TACAAACTGCCAGTCAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR GCA 72 bp CTCCCTGGGAGTCCCCTGAGCTGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAAGGTACAGGTACTTTA +
Preference number: 3 (lower is better)
Translates to: LPGSPLSCSQLR*QSQIPQGTGTL
Trigger: TAAAGTACCTGTACCTTGTGGTATCTGACTCTGGCATCTCAACTGACTACAGCTCAGGGGACTCCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCCTCCAGCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VARPAPQVAQHTLGAALQQVGPP*RGCRGS
Trigger: GGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTG...CTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: DQALQKPPKLGSAIRARTPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...CGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp GCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCCCTGCGCCGTTGCCGGCCGAGTCGCGTTCCAGCGGTaGTCGCGGGAGTGTTCGCGC +
Preference number: 4 (lower is better)
Translates to: AALQDLHPLYAPCAVAGRVAFQR*SRECSR
Trigger: GCGCGAACACTCCCGCGATCACCGCTGGAACGCGAC...TCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp GAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCGCCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: EAAEARLSHTRADGEGVAPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...CGCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp GCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCGCGTCCGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AEARLSHTRADGEGVARPSGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...CGGACGCGCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCCTCCAGAGGGACGCCCCGAGGTaGTCCATGATACAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VARPAPQVAQHTLGAALQRDAPR*SMIQPP
Trigger: CGGGGGCTGTATCATGGACCACCTCGGGGCGTCCCT...CTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp TGGCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTCCCCGAGGTGGTCCATaGTACAGCCCCCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: WPLCPHCHQALGGPHWAGPRGGP*YSPRHG
Trigger: CCCGTGGCGGGGGCTGTATCATGGACCACCTCGGGG...ACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp TGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WLQQGALIICPRLHCLHRQVGPP*RGCRGS
Trigger: GGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTG...ACGATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCCCTGCGCCGTTGCCGGCCGAGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: AALQDLHPLYAPCAVAGRAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...TCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGAGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp TGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCATCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: CPHCHQALGGPHWAGSGASGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...TGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAACCACTGGCGCACACCTaGCCACCCAGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VQVARRQQRHRLRPGAPEPLAHT*PPSGQL
Trigger: CAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAGTGG...TTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR CCA 90 bp GGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCACCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GSGCQARSSASEPGGGRAPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...TGCTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTACTGCCACCAGGCCCTaGGAGGTCCTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: CHQALGGPHWAGSGAATITATRP*EVLTGR
Trigger: CCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGT...AATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGAAGCAGAGGCTCCCTCTaGGCTGGGCTTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGSRGSL*AGLRGQ
Trigger: TTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCT...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGATCCAGGATCTCCACCTaGGGGCGGAATCAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGSRIST*GRNQGE
Trigger: CTCGCCCTGATTCCGCCCCCAGGTGGAGATCCTGGA...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR TCA 90 bp TGGCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTGTCGCGTTCCAGCGGTaGTCGCGGGAGTGTTCGCGC +
Preference number: 4 (lower is better)
Translates to: WPLCPHCHQALGGPHWAGVAFQR*SRECSR
Trigger: GCGCGAACACTCCCGCGATCACCGCTGGAACGCGAC...ACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCAGCTGGGTCAGCAGCTaGCTCCGCCGGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSSWVSS*LRRTQL
Trigger: CAGCTGCGTCCGGCGGAGGCAGCTGCTGACCCAGCT...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR GCA 90 bp TGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: WARDARPDLLLQSPAVGEPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...CTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGSGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGGACCTCGAGCTCGGGACTaGCAGCCCCGCCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GEQREHGQQHQDDHEDEGPRARD*QPRPSL
Trigger: AAGGCTGGGGCGGGGCTGGCAGTCCCGAGCTCGAGG...TCCCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR CCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: PQQRSERTSREAGGSSVKPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGTTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGTTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: ALWARDARPDLLLQSPAVFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...CACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAATTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: VQVARRQQRHRLRPGAPEFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...TTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGRSSLGGFRGSNHLSSTLGGPH*AGSGAA
Trigger: TGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAG...GGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCCCACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGTCGGATAAGCCCCCTTaGGCTCCCTGGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AHWLQQGALIICPRLHCLSDKPP*APWESP
Trigger: AGGGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGA...CAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCAGGGCGTGCCAGCCCTaGACCCGCAGGTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ATMSTLPPGPGRSSLGGFRACQP*TRRFPS
Trigger: GGAGGGAAACCTGCGGGTCCAGGGCTGGCACGCCCT...GAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586890.5
CDS-3UTR CCA 90 bp CTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGCCCCGCCGTCACCACTaGCGCACACCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: LPASSPSSALRGLPGKQVPRRHH*RTPAHP
Trigger: TGGGTGGGCAGGTGTGCGCCAGTGGTGACGGCGGGG...CACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR TCA 90 bp CTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGGAAGCCCAGGCACTaGGGGGACAACCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LPASSPSSALRGLPGKQVGKPRH*GDNQAT
Trigger: GGTGGCCTGGTTGTCCCCTCAGTGCCTGGGCTTCCC...CACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR GCA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRRRSCS*PGPPQR
Trigger: GCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCT...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PGRSSLGGFRGSNHLSSTRRSCS*PGPPQR
Trigger: GCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCT...GGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp TTGCTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCCGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLSTHSVRPSRISTLCTLRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...GAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp GCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGACCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: AAQGTVSMDARAGSWGPGPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...TCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCTCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GVSSDTGSDQALQKPPKLSAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...GAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSSGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVCPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp TGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WARDARPDLLLQSPAVGECPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...CTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSCPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCCGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSRAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCTCGTCAGCCAACCGCCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SGGGSQRNTTWPLSSANRQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...GCGGTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp CTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPASSPSSALRGLPGKQVLGGPH*AGSGAA
Trigger: TGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAG...CACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGACTGCCACCAGGCCCTaGGAGGTCCTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PQQRSERTSREAGGSSVKTATRP*EVLTGR
Trigger: CCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGT...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTACTGCCACCAGGCCCTaGGAGGTCCTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGATATRP*EVLTGR
Trigger: CCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGT...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GACGTCATGGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCAGGCTCCCTCTGGGCTaGGCTTCGAGGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DVMGVSGGGSQRNTTWPLRLPLG*ASRPKQ
Trigger: CTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCT...GAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GATGAGGGGGTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCAGCAGAGGCTCCCTCTaGGCTGGGCTTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: DEGVQVARRQQRHRLRPGSRGSL*AGLRGQ
Trigger: TTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCT...GCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGACCCCCTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GTACGCTCCCTGCGCCGTTGCCGGCCGAGACGTCCACCTCGTAGCGGATGTGAGAGCAAGCCACATAGCTaGGGGGCAGAGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: VRSLRRCRPRRPPRSGCESKPHS*GAEAQR
Trigger: CCGCTGAGCCTCTGCCCCCCAGCTATGTGGCTTGCT...CTCACATCCGCTACGAGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp GGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGCCCCGAGGTGGTCCATaGTACAGCCCCCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: GQTKSAMPLLLREASPSLPRGGP*YSPRHG
Trigger: CCCGTGGCGGGGGCTGTATCATGGACCACCTCGGGG...CAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR TCA 90 bp GTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTCCCCGAGGTGGTCCATaGTACAGCCCCCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: VLTGRVPGQQPFVQHQIGPRGGP*YSPRHG
Trigger: CCCGTGGCGGGGGCTGTATCATGGACCACCTCGGGG...ACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp CAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: QRSERTSREAGGSSVKGVQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...CACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GACGTCATGGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCTCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: DVMGVSGGGSQRNTTWPLSAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...GAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp GGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCTCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GVSSDTGSDQALQKPPKLSLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...GAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAAGGGACGCCCCGAGGTaGTCCATGATACAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSRERDAPR*SMIQPP
Trigger: CGGGGGCTGTATCATGGACCACCTCGGGGCGTCCCT...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGAAGGGACGCCCCGAGGTaGTCCATGATACAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: AAQGTVSMDARAGSWGPGRDAPR*SMIQPP
Trigger: CGGGGGCTGTATCATGGACCACCTCGGGGCGTCCCT...TCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTCGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGARAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGTTCCAGGGAAGCAGGTaGGTCCTCCGTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGFQGSR*VLREGG
Trigger: ACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAA...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCAGCAGAGGCTCCCTCTaGGCTGGGCTTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TGSSRGPSSSVPGSTACISRGSL*AGLRGQ
Trigger: TTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCT...GATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GAAGGTGTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCCATGGACGCAAGAGCTaGGAGCTGGGGTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: EGVARPAPQVAQHTLGAAHGRKS*ELGSRI
Trigger: TATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATG...GGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCCATGGACGCAAGAGCTaGGAGCTGGGGTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: GVSSDTGSDQALQKPPKLHGRKS*ELGSRI
Trigger: TATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATG...GAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CGTCAGCCAACCGCGCCACCAGCCCCACGGGGGCGTCTAGGAGCACTACTTCATTCGGATAAGCCCCCTTaGGCTCCCTGGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RQPTAPPAPRGRLGALLHSDKPP*APWESP
Trigger: AGGGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGA...ATGAAGTAGTGCTCCTAGACGCCCCCGTGGGGCTGGTGGCGCGGTTGGCTGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GATGAGGGGGTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCTCCCAGCCTGATGTTTaGGGTCGCGTTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: DEGVQVARRQQRHRLRPGSQPDV*GRVPAV
Trigger: CACCGCTGGAACGCGACCCCAAACATCAGGCTGGGA...GCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGACCCCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp TCAAACTCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCCCCGAGGTGGTCCATaGTACAGCCCCCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: SNSLSGLGMPGQIFCFRAPRGGP*YSPRHG
Trigger: CCCGTGGCGGGGGCTGTATCATGGACCACCTCGGGG...GGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp CCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCCCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLCPHCHQALGGPHWAGSPPTAR*STEALR
Trigger: CCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGG...GGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: ATMSTLPPGPGRSSLGGFMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...GAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCCAGCAAGGCCGCTTTaGTCTCGAACTTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVPARPL*SRTWGP
Trigger: CGGACCCCAAGTTCGAGAGCAAAGCGGCCTTGCTGG...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CTCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGCCAGCAAGGCCGCTTTaGTCTCGAACTTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LALWARDARPDLLLQSPAPARPL*SRTWGP
Trigger: CGGACCCCAAGTTCGAGAGCAAAGCGGCCTTGCTGG...CGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDRRSCS*PGPPQR
Trigger: GCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCT...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGGGGCTCTCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: ERTSREAGGSSVKGVQGLSAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...GAGCCCCTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCACGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: STACIVPQQRSERTSREARAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLSGLGMPGQIFCFRARRQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...CCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGAAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGRQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQLGGPH*AGSGAA
Trigger: TGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAG...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGAGCAGAGGCTCCCTCTaGGCTGGGCTTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: WESSASTVSSTRMTTRMRSRGSL*AGLRGQ
Trigger: TTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCT...CCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp AGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSRRSSAQPYARGRRRCSRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...GCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGGGGGCTCGGATAAGCCCCCTTaGGCTCCCTGGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: APDRYPGHAHCPLAPAGGSDKPP*APWESP
Trigger: AGGGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGA...GCCCCCTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTTCCCAGCCTGATGTTTaGGGTCGCGTTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: WLQQGALIICPRLHCLHRSQPDV*GRVPAV
Trigger: CACCGCTGGAACGCGACCCCAAACATCAGGCTGGGA...ACGATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp CGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGCCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RSERTSREAGGSSVKGVQPPTAR*STEALR
Trigger: CCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGG...CTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGGACCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GEQREHGQQHQDDHEDEGPPTAR*STEALR
Trigger: CCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGG...TCCCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp CGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RSERTSREAGGSSVKGVQMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...CTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp AGGCTCAGCGGCTGGGATAAGGCTGTTCTCATAAGGGTTGGAGTAGGGGCCATCCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLSGWDKAVLIRVGVGAIQVGPP*RGCRGS
Trigger: GGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTG...GATGGCCCCTACTCCAACCCTTATGAGAACAGCCTTATCCCAGCCGCTGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAATCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSRESAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp ACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGTCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TMSTLPPGPGRSSLGGFRSLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...CCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAACCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSREPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGCCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQQRSERTSREAGGSSVKPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTAGGGACGCCCCGAGGTaGTCCATGATACAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VLTGRVPGQQPFVQHQIGRDAPR*SMIQPP
Trigger: CGGGGGCTGTATCATGGACCACCTCGGGGCGTCCCT...ACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGCGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQRAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GACGTCCACCTCGTAGCGGATGTGAGACGTCATGGGTGTCTCAGGCGGCGGGAGCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: DVHLVADVRRHGCLRRREQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...CTCCCGCCGCCTGAGACACCCATGACGTCTCACATCCGCTACGAGGTGGACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGAGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AAQGTVSMDARAGSWGPGGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...TCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CGTCAGCCAACCGCGCCACCAGCCCCACGGGGGCGTCTAGGAGCACTACTTCATTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQPTAPPAPRGRLGALLHFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...ATGAAGTAGTGCTCCTAGACGCCCCCGTGGGGCTGGTGGCGCGGTTGGCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GAAGGTGTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EGVARPAPQVAQHTLGAARQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...GGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp CGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGTTCCAGGGAAGCAGGTaGGTCCTCCGTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RSERTSREAGGSSVKGVQFQGSR*VLREGG
Trigger: ACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAA...CTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GAAGGTGTAGCGCGTCCGGCCCCGCAGGTTGCTCAGCACACACTCGGTGCGGCCCTGAGCCTTCATCCATaGCCACTATGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: EGVARPAPQVAQHTLGAALSLHP*PLCPHC
Trigger: GCAGTGTGGACATAGTGGCCATGGATGAAGGCTCAG...GGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGGCTCCCTCTGGGCTaGGCTTCGAGGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDRLPLG*ASRPKQ
Trigger: CTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCT...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVYRYFR*GGVGGS
Trigger: GCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTA...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATMSTLPPGPGRSSLGGFYRYFR*GGVGGS
Trigger: GCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTA...GAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGCAAGCCACATAGCTaGGGGGCAGAGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDSKPHS*GAEAQR
Trigger: CCGCTGAGCCTCTGCCCCCCAGCTATGTGGCTTGCT...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGCCCCGAGGTGGTCCATaGTACAGCCCCCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKPRGGP*YSPRHG
Trigger: CCCGTGGCGGGGGCTGTATCATGGACCACCTCGGGG...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222139.11
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: STACIVPQQRSERTSREAMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 4 (lower is better)
Translates to: ALWARDARPDLLLQSPAVYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...CACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp ACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTGGGTGGCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TGSHHSGTATAGSYPCGWQVGPP*RGCRGS
Trigger: GGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTG...CCACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp CGACGTGTCGGCTGTAGGCAGCGAACACCAGAAGCGCACCGCACCACGAGCCGTGTTGTTATCCCAGCCTaGTGTTTGGGGTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RRVGCRQRTPEAHRTTSRVVIPA*CLGSRS
Trigger: GGAACGCGACCCCAAACATCAGGCTGGGATAACAAC...ACGGCTCGTGGTGCGGTGCGCTTCTGGTGTTCGCTGCCTACAGCCGACACGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp GGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCAGTTGTTATCCCAGCCTaGTGTTTGGGGTCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GSGCQARSSASEPGGGRAVVIPA*CLGSRS
Trigger: GGAACGCGACCCCAAACATCAGGCTGGGATAACAAC...TGCTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR GCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGCGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 4 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATCCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGGGAAAGGAAAACGGTaGCCCTCTGTACGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSREGKGKR*PSVRSL
Trigger: CAGGGAGCGTACAGAGGGGCACCGTTTTCCTTTCCC...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR GCA 90 bp TGGCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTCTGCTCAGAGAGGCCTaGAGTTTGGCTGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WPLCPHCHQALGGPHWAGLLREA*SLAARS
Trigger: GCTTCTTGCAGCCAAACTGCAGGCCTCTCTGAGCAG...ACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: STACIVPQQRSERTSREAGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAATTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSREFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GACGTCATGGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCTGGTACAGCCACAGCTaGAAGTTACCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DVMGVSGGGSQRNTTWPLWYSHS*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCA...GAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPGQQPFVQHQIGILGMLLGGPH*AGSGAA
Trigger: TGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAG...GAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCTGAGCCTTCATCCATaGCCACTATGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGLSLHP*PLCPHC
Trigger: GCAGTGTGGACATAGTGGCCATGGATGAAGGCTCAG...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AAGGGTTGGAGTAGGGGCCATCGGATAAGCCCCCTTGGGCTCCCTGGGAGTCCCCATGGACGCAAGAGCTaGGAGCTGGGGTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: KGWSRGHRISPLGLPGSPHGRKS*ELGSRI
Trigger: TATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATG...GGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGATGGCCCCTACTCCAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PQQRSERTSREAGGSSVKRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGAYRYFR*GGVGGS
Trigger: GCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTA...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GACGTCATGGGTGTCTCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCCTCATCCCCTCGATTTaGAGGCGTTGTTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: DVMGVSGGGSQRNTTWPLLIPSI*RRCYPS
Trigger: GCTGGGATAACAACGCCTCCAAATCGAGGGGATGAG...GAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGAGACACCCATGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp TGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGGCGACACAGCTTCCATaGCTCATCCCCTCGATTTGG +
Preference number: 4 (lower is better)
Translates to: WARDARPDLLLQSPAVGEATQLP*LIPSIW
Trigger: CCAAATCGAGGGGATGAGCCATGGAAGCTGTGTCGC...CTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCGCGACACAGCTTCCATaGCTCATCCCCTCGATTTGG +
Preference number: 4 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVATQLP*LIPSIW
Trigger: CCAAATCGAGGGGATGAGCCATGGAAGCTGTGTCGC...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCCAGGTGGGTCCTCCGTaGAGGGGGTGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSQVGPP*RGCRGS
Trigger: GGAGCCCCTGCACCCCCTTCACGGAGGACCCACCTG...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR TCA 90 bp TCAGGCGGCGGGAGCCAGCGCAACACTACGTGGCCGCTCTCGTCAGCCAACCGCCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGGGSQRNTTWPLSSANRLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...GCGGTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTGGCTCCCGCCGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp GCCCACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AHWLQQGALIICPRLHCLLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...CAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp GTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VPGQQPFVQHQIGILGMLRRSCS*PGPPQR
Trigger: GCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCT...GAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp TCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTCGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 4 (lower is better)
Translates to: STTGSHHSGTATAGSYPCRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...ACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp GGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GWIGQTKSAMPLLLREASCPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...CGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp GGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGCCACTATGTCCACACTaGCACCAGGCCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GQTKSAMPLLLREASPSLPLCPH*HQALGG
Trigger: ACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGG...CAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGCCTGCAGTTTGGCTaGAAGAAGCAGGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: STACIVPQQRSERTSREAGLQFG*KKQGSP
Trigger: TGGGCTTCCCTGCTTCTTGCAGCCAAACTGCAGGCC...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp GGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GQTKSAMPLLLREASPSLQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...CAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGTTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222139.11
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGTTCAGAGCCCGGCGGTaGGAGAGCAGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLFRARR*ESSAST
Trigger: CGTGCTCGCGCTGCTCTCCCACCGCCGGGCTCTGAA...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGTGGTACAGCCACAGCTaGAAGTTACCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRWYSHS*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCA...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTTCCAGGGAAGCAGGTaGGTCCTCCGTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVFQGSR*VLREGG
Trigger: ACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAA...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTGCCTGGGAGGTCCTCACTaGGCGGGTTCCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EAHFQARSLKWPIEGHCCLGGPH*AGSGAA
Trigger: TGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAG...GCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGACTGCCACCAGGCCCTaGGAGGTCCTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKTATRP*EVLTGR
Trigger: CCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGT...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222139.11
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTGGGTGGACTGCCACCAGGCCCTaGGAGGTCCTCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TGSHHSGTATAGSYPCGWTATRP*EVLTGR
Trigger: CCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGT...CCACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCACTGAGCCTTCATCCATaGCCACTATGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: GAAQGTVSMDARAGSWGPLSLHP*PLCPHC
Trigger: GCAGTGTGGACATAGTGGCCATGGATGAAGGCTCAG...TGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCAAACTCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCAGGCTCCCTCTGGGCTaGGCTTCGAGGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SNSLSGLGMPGQIFCFRARLPLG*ASRPKQ
Trigger: CTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCT...GGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TTGCTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCCTCTGTACGCTCTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSTHSVRPSRISTLCTLYRYFR*GGVGGS
Trigger: GCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTA...GAGCGTACAGAGGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CCA 90 bp GGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGGGAGAGCACAGAGGCTCAGCGGCTaGGATAAGGCTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: GSGCQARSSASEPGGGRAQRLSG*DKAVLI
Trigger: TATGAGAACAGCCTTATCCCAGCCGCTGAGCCTCTG...TGCTCTCCCACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CTCAGCGGCTGGGATAAGGCTGTTCTCATAAGGGTTGGAGTAGGGGCCATCGGAAGCGGCCAGCTGAGCTaGGCGCGGCGTTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LSGWDKAVLIRVGVGAIGSGQLS*ARRSRP
Trigger: AGGTCTTGAACGCCGCGCCCAGCTCAGCTGGCCGCT...TCCGATGGCCCCTACTCCAACCCTTATGAGAACAGCCTTATCCCAGCCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR TCA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCTGGTACAGCCACAGCTaGAGAAATAGCACCAACCTG +
Preference number: 4 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVWYSHS*RNSTNL
Trigger: CAGGTTGGTGCTATTTCTTCAGCTGTGGCTGTACCA...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR GCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: TKSAMPLLLREASPSLFHRRSCS*PGPPQR
Trigger: GCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCT...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTTCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSSLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CCGACCAGGCGCTCCAGAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGATGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: PTRRSRSRRSSAQPYARGCSQLR*QSQIPQ
Trigger: TTGTGGTATCTGACTCTGGCATCTCAACTGACTACA...TCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTCTGGAGCGCCTGGTCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR GCA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAATATCCCTATGGCCTATaGCCAGGGGAAGATGGGACT +
Preference number: 4 (lower is better)
Translates to: GSTACIVPQQRSERTSREYPYGL*PGEDGT
Trigger: AGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATA...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp GAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTGCAGGGACGCCCCGAGGTaGTCCATGATACAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: EAHFQARSLKWPIEGHCCRDAPR*SMIQPP
Trigger: CGGGGGCTGTATCATGGACCACCTCGGGGCGTCCCT...GCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGGTGTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ALWARDARPDLLLQSPAVWKLPL*VVKRPS
Trigger: TGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCA...CACCGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTTGGTACAGCCACAGCTaGAAGTTACCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGAWYSHS*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCA...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp AGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACAGCAAGCCACATAGCTaGGGGGCAGAGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RGSTTGSHHSGTATAGSYSKPHS*GAEAQR
Trigger: CCGCTGAGCCTCTGCCCCCCAGCTATGTGGCTTGCT...GTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCGCGTCCGTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: AEARLSHTRADGEGVARPFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...CGGACGCGCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp GGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGGACTCATCCCCTCGATTTaGAGGCGTTGTTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: GEQREHGQQHQDDHEDEGLIPSI*RRCYPS
Trigger: GCTGGGATAACAACGCCTCCAAATCGAGGGGATGAG...TCCCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 4 (lower is better)
Translates to: VLTGRVPGQQPFVQHQIGYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...ACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp CCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PQQRSERTSREAGGSSVKVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...CTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp CCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGRSSLGGFRGSNHLSSTLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...GGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp AGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: REEAHFQARSLKWPIEGHQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...ATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp AGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACGCAGACAAAAATAGATaGCGTGGGGGCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGSTTGSHHSGTATAGSYADKNR*RGGGPW
Trigger: CCAGGGCCCGCCCCCACGTCATCTATTTTTGTCTGC...GTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR GCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKAVGAW*RRHSFH
Trigger: ATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGC...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222139.11
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTCGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCRSLRR*RPRRPP
Trigger: AGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCG...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGCGACACAGCTTCCATaGCTCATCCTCGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSATQLP*LILELV
Trigger: TACCAGCTCGAGGATGAGCCATGGAAGCTGTGTCGC...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCCGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSRAVGA*CRRHSF
Trigger: GAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCG...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WESSASTVSSTRMTTRMRWKLPL*VVKRPS
Trigger: TGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCA...CCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGAWKLPL*VVKRPS
Trigger: TGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCA...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGTGTTCTCATAAGGGTTaGAGTAGGGGCCATCGGATA +
Preference number: 4 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRCSHKG*SRGHRI
Trigger: TATCCGATGGCCCCTACTCCAACCCTTATGAGAACA...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CTCGCTCTCTGGGCTCGGGATGCCAGGCCAGATCTTCTGCTTCAGAGCCCGGCGTGTTCTCATAAGGGTTaGAGTAGGGGCCATCGGATA +
Preference number: 4 (lower is better)
Translates to: LALWARDARPDLLLQSPACSHKG*SRGHRI
Trigger: TATCCGATGGCCCCTACTCCAACCCTTATGAGAACA...CGCCGGGCTCTGAAGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATCAGAGGCTCAGCGGCTaGGATAAGGCTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: QLRAQCPWTQELGAGVQDQRLSG*DKAVLI
Trigger: TATGAGAACAGCCTTATCCCAGCCGCTGAGCCTCTG...ATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GAAGCCGCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCGTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: EAAEARLSHTRADGEGVAFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...CGCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp ACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTGGGTGGGGGCCCTGGTGGAACTaGGCCAATCAGGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGSHHSGTATAGSYPCGWGPWWN*ANQGKG
Trigger: TCCTTTCCCCTGATTGGCTCAGTTCCACCAGGGCCC...CCACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR GCA 90 bp CAAGGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCAGCTGGGTCAGCAGCTaGCTCCGCCGGACGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGCGFLSRMDWADKISNASWVSS*LRRTQL
Trigger: CAGCTGCGTCCGGCGGAGGCAGCTGCTGACCCAGCT...GGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGCAGCGCAACACTACGTaGCCGCTCTCGTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKQRNTT*PLSSAN
Trigger: GTTGGCTGACGAGAGCGGCCACGTAGTGTTGCGCTG...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATTTCCAGGGAAGCAGGTaGGTCCTCCGTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TKSAMPLLLREASPSLFHFQGSR*VLREGG
Trigger: ACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAA...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp AGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATAGGCTCCCTCTGGGCTaGGCTTCGAGGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: REEAHFQARSLKWPIEGHRLPLG*ASRPKQ
Trigger: CTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCT...ATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCAGCAGAGGCTCCCTCTaGGCTGGGCTTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSSRGSL*AGLRGQ
Trigger: TTGGCCTCGAAGCCCAGCCCAGAGGGAGCCTCTGCT...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACCATGGACGCAAGAGCTaGGAGCTGGGGTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: SGAATICPAPDRYPGHAHHGRKS*ELGSRI
Trigger: TATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATG...GTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AGGCTCAGCGGCTGGGATAAGGCTGTTCTCATAAGGGTTGGAGTAGGGGCCATCAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLSGWDKAVLIRVGVGAIRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...GATGGCCCCTACTCCAACCCTTATGAGAACAGCCTTATCCCAGCCGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTCGGATAAGCCCCCTTaGGCTCCCTGGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSSDKPP*APWESP
Trigger: AGGGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGA...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACCCTTGTTCGGATAAGCCCCCTTaGGCTCCCTGGGAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: STTGSHHSGTATAGSYPCSDKPP*APWESP
Trigger: AGGGGACTCCCAGGGAGCCCAAGGGGGCTTATCCGA...ACAAGGGTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTTGTTCTCATAAGGGTTaGAGTAGGGGCCATCGGATA +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGACSHKG*SRGHRI
Trigger: TATCCGATGGCCCCTACTCCAACCCTTATGAGAACA...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTCAGAGGCTCAGCGGCTaGGATAAGGCTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSQRLSG*DKAVLI
Trigger: TATGAGAACAGCCTTATCCCAGCCGCTGAGCCTCTG...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGCAGAGGCTCAGCGGCTaGGATAAGGCTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVQRLSG*DKAVLI
Trigger: TATGAGAACAGCCTTATCCCAGCCGCTGAGCCTCTG...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCAGGTCGCTAGGCGTCAGCAGCGACACAGGCTCCGACCAGGCGCTCCAGAAGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: VQVARRQQRHRLRPGAPEVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...TTCTGGAGCGCCTGGTCGGAGCCTGTGTCGCTGCTGACGCCTAGCGACCTGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CCA 90 bp TGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: WLQQGALIICPRLHCLHRVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...ACGATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp GAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTATGTGGATGACACGGTaGTATCGCGGAGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: ERKPISRPDPSNGPLRVIMWMTR*YRGAPE
Trigger: CTCCGGCGCTCCGCGATATCACCGTGTCATCCACAT...AATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp AGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 4 (lower is better)
Translates to: RGSTTGSHHSGTATAGSYYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...GTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR TCA 90 bp CTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LRAQCPWTQELGAGVQDSVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...ACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp TATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTAAGAGCAAGCCACATAGCTCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: YWIPDHLQPGVLRASHIAQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...AGCTATGTGGCTTGCTCTTAGGACACCAGGCTGCAGATGATCAGGGATCCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTCAATGCCCCTGCTCCTaGGAGAGGCCTCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCQCPCS*ERPRHP
Trigger: GGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTG...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp CTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGATCAGCACACACTCGGTaGGGCCCTCCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LSRMDWADKISNAPAPERSAHTR*GPPGSP
Trigger: TGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGA...TCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp GAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGGGGCTCTGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: ERTSREAGGSSVKGVQGLCSQLR*QSQIPQ
Trigger: TTGTGGTATCTGACTCTGGCATCTCAACTGACTACA...GAGCCCCTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp ACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCTGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: TGSSRGPSSSVPGSTACICSQLR*QSQIPQ
Trigger: TTGTGGTATCTGACTCTGGCATCTCAACTGACTACA...GATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACGCGACACAGCTTCCATaGCTCATCCTCGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RGSTTGSHHSGTATAGSYATQLP*LILELV
Trigger: TACCAGCTCGAGGATGAGCCATGGAAGCTGTGTCGC...GTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR CCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCCCGCACCACGAGCCGTaGGAGCCTGGTGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLPHHEP*EPGAGD
Trigger: GTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGG...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp GGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTAGGCTCCCTCTGGGCTaGGCTTCGAGGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GCGFLSRMDWADKISNAPRLPLG*ASRPKQ
Trigger: CTGCTTTGGCCTCGAAGCCCAGCCCAGAGGGAGCCT...AGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATTACAGGTACTTTAGGTaGGGTGGGGTAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TKSAMPLLLREASPSLFHYRYFR*GGVGGS
Trigger: GCTGCCCCCTACCCCACCCCACCTAAAGTACCTGTA...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCATGTTCTCATAAGGGTTaGAGTAGGGGCCATCGGATA +
Preference number: 4 (lower is better)
Translates to: STACIVPQQRSERTSREACSHKG*SRGHRI
Trigger: TATCCGATGGCCCCTACTCCAACCCTTATGAGAACA...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp ACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: TMSTLPPGPGRSSLGGFRFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...CCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GACGTCCACCTCGTAGCGGATGTGAGACGTCATGGGTGTCTCAGGCGGCGGGAGGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: DVHLVADVRRHGCLRRREVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...CTCCCGCCGCCTGAGACACCCATGACGTCTCACATCCGCTACGAGGTGGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR TCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGC +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKYPCGW*RGLQTR
Trigger: GCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTA...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222139.11
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCCCTCTGTACGCTCCCTaGGCCGTTGCCGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLPLYAP*AVAGRD
Trigger: GTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGG...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp GGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGGATGTGAGACGTCATaGGTGTCTCAGGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GCGFLSRMDWADKISNAPGCETS*VSQAAG
Trigger: TCCCGCCGCCTGAGACACCCATGACGTCTCACATCC...AGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGGGTAGGGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WGRGQLRAQCPWTQELGAFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTCCAGCAGATGCCCAGGGGAAGATaGGACTTAAAGGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VQHQIGILGMLTAHWLQQMPRGR*DLKGVC
Trigger: ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCAT...CTGCTGGAGCCAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGACCAGGCCACCTACCTaGAAGTTACCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLTRPPT*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGT...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGAGAGGCCTGCAGTTTaGCTGCAAGAAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLERPAV*LQEAGK
Trigger: CTTCCCTGCTTCTTGCAGCCAAACTGCAGGCCTCTC...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR TCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTACCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLPPTAR*STEALR
Trigger: CCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGG...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR TCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGAAGGTTGTGGTTTCCTaGGCAGGATGGATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKKVVVS*AGWIGQ
Trigger: CTGCCCAATCCATCCTGCTCAGGAAACCACAACCTT...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR GCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTSGPAG*SAHTRC
Trigger: GCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGA...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTTGTCCCCGGCTCCACTaGCTGCATCGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTCPRLH*LHRPPA
Trigger: TGCTGGGGGACGATGCAGGCAGTGGAGCCGGGGACA...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATCTGAGCCTTCATCCATaGCCACTATGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: TKSAMPLLLREASPSLFHLSLHP*PLCPHC
Trigger: GCAGTGTGGACATAGTGGCCATGGATGAAGGCTCAG...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp GTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTCTGAGCAGGATGGATTaGGCAGACAAAATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VLTGRVPGQQPFVQHQIGLSRMD*ADKISN
Trigger: ATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG...ACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CCA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGAATACTGCAAGGTTGTaGTTTCCTGAGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVNTARL*FPEQDG
Trigger: TCCATCCTGCTCAGGAAACCACAACCTTGCAGTATT...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR TCA 90 bp ACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TKSAMPLLLREASPSLFHVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...ATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR TCA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGTCATATTGGATCCCTaGTCATCTGCAGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLVILDP*SSAAWC
Trigger: ACACCAGGCTGCAGATGATCAGGGATCCAATATGAC...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp TATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTAAGAGCAAGCCACATAGCTTCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YWIPDHLQPGVLRASHIASLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...AGCTATGTGGCTTGCTCTTAGGACACCAGGCTGCAGATGATCAGGGATCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR GCA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVCSQLR*QSQIPQ
Trigger: TTGTGGTATCTGACTCTGGCATCTCAACTGACTACA...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp TATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTAAGAGCAAGCCACATAGCTTTCAAACTCGCTCTCTaGGCTCGGGATGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: YWIPDHLQPGVLRASHIAFKLAL*ARDARP
Trigger: TGGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAA...AGCTATGTGGCTTGCTCTTAGGACACCAGGCTGCAGATGATCAGGGATCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGTACTCAAAGTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVHGRKSWELGSRIVYSKWKLPL*VVKRPS
Trigger: TGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCA...CTTTGAGTACACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp AGAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATGCCAGATCCCTCAAATaGCCCATTGAGGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: REEAHFQARSLKWPIEGHARSLK*PIEGHC
Trigger: GCAATGACCCTCAATGGGCCATTTGAGGGATCTGGC...ATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
3UTR CAA 72 bp AAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATaGAGGGTCATTGCTGCCCTTTTTCTTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KPISRPDPSNGP*RVIAALFLPLL
Trigger: CAGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTCCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTPPTAR*STEALR
Trigger: CCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGG...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp GAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTGCCTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EAHFQARSLKWPIEGHCCLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...GCAGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp GAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTACTGTTTCCAGCCAGTaGGGTGTGAGAAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERKPISRPDPSNGPLRVITVSSQ*GVRRRE
Trigger: CTCTCTTCTTCTCACACCTCACTGGCTGGAAACAGT...AATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp AGCTACAGACTGGAAGAGTCTGAACCTCTGACTCATCCCATGGATGGCTGCCCATGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SYRLEESEPLTHPMDGCPWKLPL*VVKRPS
Trigger: TGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCA...TGGGCAGCCATCCATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAAGCAAGCCACATAGCTaGGGGGCAGAGGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKSKPHS*GAEAQR
Trigger: CCGCTGAGCCTCTGCCCCCCAGCTATGTGGCTTGCT...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTAGGCAGCCATCATTCTaGTACAGCCACAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCRQPSF*YSHSWK
Trigger: CTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCT...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCCATGGACGCAAGAGCTaGGAGCTGGGGTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLHGRKS*ELGSRI
Trigger: TATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATG...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp GGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTGCCCATTTGAGCTaGGTTAGGAGAGAGAAATCA +
Preference number: 4 (lower is better)
Translates to: GCGFLSRMDWADKISNAPAAHLS*VRREKS
Trigger: TGATTTCTCTCTCCTAACTCAGCTCAAATGGGCAGC...AGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTCAGACTGGAAGAGTCTaGACCTCTGACTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCQTGRV*TSDSSH
Trigger: ATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTG...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAACCAGCCAGTGAGGTGTaGGAAGAAGAGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKPASEV*EEERKP
Trigger: GGGCTTCCTCTCTTCTTCTCACACCTCACTGGCTGG...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCACCAGCAAGGCCGCTTTaGTCTCGAACTTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPPARPL*SRTWGP
Trigger: CGGACCCCAAGTTCGAGAGCAAAGCGGCCTTGCTGG...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAATCTCTGGGCTCGGGATaGCAGGCCAGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKSLGSG*QARSSA
Trigger: AGCAGAAGATCTGGCCTGGCATCCCGAGCCCAGAGA...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAAGGGCACAGTGTCCATaGACGCAAGAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKRAQCP*TQELGA
Trigger: AGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCT...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCAATACTGCAAGGTTGTaGTTTCCTGAGCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSNTARL*FPEQDG
Trigger: TCCATCCTGCTCAGGAAACCACAACCTTGCAGTATT...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR TCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTAAGGTTGTGGTTTCCTaGGCAGGATGGATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTKVVVS*AGWIGQ
Trigger: CTGCCCAATCCATCCTGCTCAGGAAACCACAACCTT...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGTGCAGATCCAGCTTCTaGATAAGCTCAAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: KSAMPLLLREASPSLFHKCRSSF*ISSRTL
Trigger: TAAAGTTCTTGAGCTTATTCAGAAGCTGGATCTGCA...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR GCA 90 bp AGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTTGTAGTCAGTTGAGATaGCAGAGTCAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: RKPISRPDPSNGPLRVIACSQLR*QSQIPQ
Trigger: TTGTGGTATCTGACTCTGGCATCTCAACTGACTACA...AGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCTATCCCTATGGCCTATaGCCAGGGGAAGATGGGACT +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLYPYGL*PGEDGT
Trigger: AGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATA...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp CTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAGGGTGTTTGTCCCATTGAGGGTCATTaGTGCCCTTTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSLWPMPRGRWDLKGVCPIEGH*CPFSSL
Trigger: AAGGGAAGAAAAAGGGCAGCAATGACCCTCAATGGG...ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCGCCCTTAAACAGCTTTaGCCTTCCTGGGTGTACAGC +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLALKQL*PSWVYS
Trigger: GCTGTACACCCAGGAAGGGCAAAGCTGTTTAAGGGC...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTCTGAGCCTTCATCCATaGCCACTATGTCCACACTGC +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTLSLHP*PLCPHC
Trigger: GCAGTGTGGACATAGTGGCCATGGATGAAGGCTCAG...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp CAAGGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCTGTTCTCATAAGGGTTaGAGTAGGGGCCATCGGATA +
Preference number: 4 (lower is better)
Translates to: QGCGFLSRMDWADKISNACSHKG*SRGHRI
Trigger: TATCCGATGGCCCCTACTCCAACCCTTATGAGAACA...GGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTCAGAGGCTCAGCGGCTaGGATAAGGCTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTQRLSG*DKAVLI
Trigger: TATGAGAACAGCCTTATCCCAGCCGCTGAGCCTCTG...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp AGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTGCTTTCTCTGAGTCATATTaGATCCCTGATCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: RKPISRPDPSNGPLRVIAFSESY*IPDHLQ
Trigger: CTGCAGATGATCAGGGATCCAATATGACTCAGAGAA...AGCAATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp AGCTACAGACTGGAAGAGTCTGAACCTCTGACTCATCCCATGGATGGCTGCCCATGCAGATCCAGCTTCTaGATAAGCTCAAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: SYRLEESEPLTHPMDGCPCRSSF*ISSRTL
Trigger: TAAAGTTCTTGAGCTTATTCAGAAGCTGGATCTGCA...TGGGCAGCCATCCATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGCGACACAGCTTCCATaGCTCATCCTCGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPATQLP*LILELV
Trigger: TACCAGCTCGAGGATGAGCCATGGAAGCTGTGTCGC...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAATGGTACAGCCACAGCTaGAAGTTACCCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKWYSHS*KLPLWV
Trigger: CACCCACAAGGGTAACTTCCAGCTGTGGCTGTACCA...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp CACTGGTTCTCTGAGTCATATTGGATCCCTGATCATCTGCAGCCTGGTGTCCTAGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: HWFSESYWIPDHLQPGVLVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...TAGGACACCAGGCTGCAGATGATCAGGGATCCAATATGACTCAGAGAACCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CCA 90 bp CAAGGTTGTGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCTGAGCAGGATGGATTaGGCAGACAAAATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QGCGFLSRMDWADKISNALSRMD*ADKISN
Trigger: ATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG...GGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCACAACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CCA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTGTCTTGAGTCTGCACTaGTTCTCTGAGTCATATTGG +
Preference number: 4 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTVLSLH*FSESYW
Trigger: CCAATATGACTCAGAGAACCAGTGCAGACTCAAGAC...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR TCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCACTGTTCCATAAGTCTTaGGTCTGCACTGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPLFHKS*VCTGSL
Trigger: CAGAGAACCAGTGCAGACTCAAGACTTATGGAACAG...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR TCA 90 bp CATCTAAGTACCCTAAGAGAAGGTAGAGCTACAGACTGGAAGAGTCTGAACCTCTTTTTCTTCCCTTGCTaGCTGGCAGTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: HLSTLREGRATDWKSLNLFFFPC*LAVCRT
Trigger: TGTTCTACAAACTGCCAGTCAGCAAGGGAAGAAAAA...GAGGTTCAGACTCTTCCAGTCTGTAGCTCTACCTTCTCTTAGGGTACTTAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR GCA 90 bp AGAACTTTAACTTCTATCCCTATGGCCTATGCCCAGGGGAAGATGGGACTTAAAATTGAGGGTCATTGCTaGCCTTTTTCTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTLTSIPMAYAQGKMGLKIEGHC*PFSSLA
Trigger: AGCAAGGGAAGAAAAAGGGCAGCAATGACCCTCAAT...TTTAAGTCCCATCTTCCCCTGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CCA 90 bp CAGCTTCTGAATAAGCTCAAGAACTTTAACTTCTATCCCTATGGCCTATGCCCAATGCCCAGGGGAAGATaGGACTTAAAGGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QLLNKLKNFNFYPYGLCPMPRGR*DLKGVC
Trigger: ACAAACACCCTTTAAGTCCCATCTTCCCCTGGGCAT...TGGGCATAGGCCATAGGGATAGAAGTTAAAGTTCTTGAGCTTATTCAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS TCA 90 bp CCCCGCCGTCACCACTGGCGCACACCTGCCCACCCAGCGGCCAGCTaGGCTGGGCGCGGCGTTCAAGACCTCGAGCTCGGGACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PRRHHWRTPAHPAAS*AGRGVQDLELGTAS
Trigger: GCTGGCAGTCCCGAGCTCGAGGTCTTGAACGCCGCGCCCAGCTCAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAGTGGTGACGGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS GCA 90 bp CCGCCAGCAAGGCCGTGTCCCCCGCCGTCACCACTGGCGCACACCTaGCCACCCAGCGGCCAGCTGAGCTGGGCGCGGCGTTCAAGACCT +
Preference number: 5 (lower is better)
Translates to: PPARPCPPPSPLAHT*PPSGQLSWARRSRP
Trigger: AGGTCTTGAACGCCGCGCCCAGCTCAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAGTGGTGACGGCGGGGGACACGGCCTTGCTGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS CCA 90 bp CCGTCACCACTGGCGCACACCTGCCCACCCAGCGGCCAGCTGAGCTaGGCGCGGCGTTCAAGACCTCGAGCTCGGGACTGCCAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: PSPLAHTCPPSGQLS*ARRSRPRARDCQPR
Trigger: GCGGGGCTGGCAGTCCCGAGCTCGAGGTCTTGAACGCCGCGCCCAGCTCAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAGTGGTGACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS GCA 90 bp TACGCGCGCGGACGGCGAAGGTGTAGCGCGTCCGGCCCCGCAGGTTaGTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: YARGRRRCSASGPAG*SAHTRCGPPGSPPG
Trigger: CCCAGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGACGCGCTACACCTTCGCCGTCCGCGCGCGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000591958.5
CDS-3UTR CAA 90 bp GCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCACGCTCCCTGCGCCGTaGCCGGCCGAGACGTCCACC +
Preference number: 5 (lower is better)
Translates to: ATMSTLPPGPGRSSLGGFTLPAP*PAETST
Trigger: GGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGT...GAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CAA 90 bp ACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCACGCTCCCTGCGCCGTaGCCGGCCGAGACGTCCACC +
Preference number: 5 (lower is better)
Translates to: TRPWEVLTGRVPGQQPFVTLPAP*PAETST
Trigger: GGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGT...GACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CAA 90 bp CGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTCCTCCGTGAAGGGGGTGCAGACGCTCCCTGCGCCGTaGCCGGCCGAGACGTCCACC +
Preference number: 5 (lower is better)
Translates to: RSERTSREAGGSSVKGVQTLPAP*PAETST
Trigger: GGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGT...CTGCACCCCCTTCACGGAGGACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CAA 90 bp TATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGGGGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: YVHTATRPWEVLTGRVPGVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...CCCCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS-3UTR CAA 90 bp ACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGCATCGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: TGSSRGPSSSVPGSTACIVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...GATGCAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS TCA 90 bp TCGCCGCTTCCTCCCAGAAACACACCAAGTCCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGGGCCCCCGGGCCGCCAGCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: SPLPPRNTPSPPTAR*STEALRAPGPPARP
Trigger: CGGCCTTGCTGGCGGCCCGGGGGCCCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGGACTTGGTGTGTTTCTGGGAGGAAGCGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222139.11
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
ENST00000591958.5
ENST00000592375.6
CDS CCA 90 bp GCGTGCCAGCCCTGGACCCGCAGGTTTCCCTCCAGTGACCACGACTaGAGGCGCCGTCGGGCCTCAAACAGCAGGGGACATACGAGGCTA +
Preference number: 5 (lower is better)
Translates to: ACQPWTRRFPSSDHD*RRRRASNSRGHTRL
Trigger: TAGCCTCGTATGTCCCCTGCTGTTTGAGGCCCGACGGCGCCTCCAGTCGTGGTCACTGGAGGGAAACCTGCGGGTCCAGGGCTGGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588681.5
ENST00000589402.1
CDS-3UTR CAA 90 bp GCCCACTGGCTCCAGCAGGGGGCCCTCATCATCTGTCCCCGGCTCCACTGCCTGGCTTTGCTCTCGAACTaGGGGTCCGGGAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: AHWLQQGALIICPRLHCLALLSN*GSGRLG
Trigger: GCCTAACCTCCCGGACCCCAAGTTCGAGAGCAAAGC...CAGGCAGTGGAGCCGGGGACAGATGATGAGGGCCCCCTGCTGGAGCCAGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000592375.6
CDS GCA 90 bp ACCCGCCGGATCGGACTCACTCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCCAGAAACACA +
Preference number: 5 (lower is better)
Translates to: TRRIGLTRAGRRSCS*PGPPQRSPLPPRNT
Trigger: TGTGTTTCTGGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGAGTGAGTCCGATCCGGCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588681.5
ENST00000589402.1
CDS-3UTR CAA 90 bp GCCGAAGCTCGGCTCAGCCATACGCGCGCGGACGGCGAAGGTGTAGCGCGTCCGAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AEARLSHTRADGEGVARPSWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCT...CGGACGCGCTACACCTTCGCCGTCCGCGCGCGTATGGCTGAGCCGAGCTTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS CCA 90 bp GGCAGCGAACACCAGAAGCGCACCGCACCACGAGCCGTGGGAGCCTaGTGCAGGCGACACAGCTTCCATGGCTCATCCCCTCGATTTGGA +
Preference number: 5 (lower is better)
Translates to: GSEHQKRTAPRAVGA*CRRHSFHGSSPRFG
Trigger: TCCAAATCGAGGGGATGAGCCATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGGTGCGCTTCTGGTGTTCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS CCA 90 bp GCTCATCCCCTCGATTTGGAGGCGTTGTTATCCCAGCCTGATGTTTaGGGTCGCGTTCCAGCGGTGATCGCGGGAGTGTTCGCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: AHPLDLEALLSQPDV*GRVPAVIAGVFAPR
Trigger: CCGGGGCGCGAACACTCCCGCGATCACCGCTGGAACGCGACCCCAAACATCAGGCTGGGATAACAACGCCTCCAAATCGAGGGGATGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS-3UTR CAA 90 bp CCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: PHWAGSGAATICPAPDRYVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...ATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
ENST00000592375.6
CDS GCA 90 bp ACAGCTTCCATGGCTCATCCTCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCCAGAAACACA +
Preference number: 5 (lower is better)
Translates to: TASMAHPRAGRRSCS*PGPPQRSPLPPRNT
Trigger: TGTGTTTCTGGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGAGGATGAGCCATGGAAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222139.11
ENST00000591958.5
ENST00000592375.6
CDS GCA 90 bp TTTCCCTCCAGTGACCACGATCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCCAGAAACACA +
Preference number: 5 (lower is better)
Translates to: FPSSDHDRAGRRSCS*PGPPQRSPLPPRNT
Trigger: TGTGTTTCTGGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGATCGTGGTCACTGGAGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586890.5
CDS-3UTR CAA 90 bp GAGAGGAAGCCCATTTCCAGGCCAGATCCCTCAAATGGCCCATTGAGGGTCATTACGCTCCCTGCGCCGTaGCCGGCCGAGACGTCCACC +
Preference number: 5 (lower is better)
Translates to: ERKPISRPDPSNGPLRVITLPAP*PAETST
Trigger: GGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGT...AATGACCCTCAATGGGCCATTTGAGGGATCTGGCCTGGAAATGGGCTTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CAA 90 bp AGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTGGAAGTTACGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: RGSTTGSHHSGTATAGSYVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...GTAACTTCCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CAA 90 bp GCCACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ATMSTLPPGPGRSSLGGFSWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCT...GAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000591958.5
CDS-3UTR CAA 90 bp TCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCACCTTTGCTCTCGAACTaGGGGTCCGGGAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: STACIVPQQRSERTSREAPLLSN*GSGRLG
Trigger: GCCTAACCTCCCGGACCCCAAGTTCGAGAGCAAAGG...TGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS TCA 90 bp AGGGGACAACCAGGCCACCTACCTGGAAGTTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGGATGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RGQPGHLPGSYPCGW*RGLQTRSLGSGCQA
Trigger: GGCCTGGCATCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS CCA 90 bp AGGTTGCTCAGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCTaGGGGCGGAATCAGGGCGAGGGACGCGTAGCAGACAAAAATAGA +
Preference number: 5 (lower is better)
Translates to: RLLSTHSVRPSRIST*GRNQGEGRVADKNR
Trigger: TCTATTTTTGTCTGCTACGCGTCCCTCGCCCTGATTCCGCCCCCAGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCTGAGCAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS-3UTR CAA 90 bp CCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAAGCAGGTGGGTGCTCATCCCCTCGATTaGGAGGCGTTGTTATCCCAG +
Preference number: 5 (lower is better)
Translates to: PASSPSSALRGLPGKQVGAHPLD*EALLSQ
Trigger: CTGGGATAACAACGCCTCCAAATCGAGGGGATGAGC...ACCCACCTGCTTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CAA 90 bp TGGGAGAGCAGCGCGAGCACGGTCAGCAGCACCAGGATGACCACGAGGATGAGGGCTCATCCCCTCGATTaGGAGGCGTTGTTATCCCAG +
Preference number: 5 (lower is better)
Translates to: WESSASTVSSTRMTTRMRAHPLD*EALLSQ
Trigger: CTGGGATAACAACGCCTCCAAATCGAGGGGATGAGC...CCTCATCCTCGTGGTCATCCTGGTGCTGCTGACCGTGCTCGCGCTGCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS CCA 90 bp GGCACTGAGGGGACAACCAGGCCACCTACCTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGGATG +
Preference number: 5 (lower is better)
Translates to: GTEGTTRPPTWKLPL*VVKRPSNSLSGLGM
Trigger: CATCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCCCTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS-3UTR CAA 90 bp CCTCACTGGGCGGGTTCCGGGGCAGCAACCATTTGTCCAGCACCAGATAGGTATGCTTTGCTCTCGAACTaGGGGTCCGGGAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: PHWAGSGAATICPAPDRYALLSN*GSGRLG
Trigger: GCCTAACCTCCCGGACCCCAAGTTCGAGAGCAAAGC...ATACCTATCTGGTGCTGGACAAATGGTTGCTGCCCCGGAACCCGCCCAGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000592375.6
CDS-3UTR CAA 90 bp CTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGTCCGGCCCCGCAGGTaGCTCAGCACACACTCGGTG +
Preference number: 5 (lower is better)
Translates to: LSRMDWADKISNAPAPERVRPRR*LSTHSV
Trigger: CACCGAGTGTGTGCTGAGCAACCTGCGGGGCCGGAC...TCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CAA 90 bp GGGGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCACTCGATTTGGAGGCGTaGTTATCCCAGCCTGATGTT +
Preference number: 5 (lower is better)
Translates to: GAAQGTVSMDARAGSWGPLDLEA*LSQPDV
Trigger: AACATCAGGCTGGGATAACAACGCCTCCAAATCGAG...TGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS-3UTR CAA 90 bp ACTATGTCCACACTGCCACCAGGCCCTGGGAGGTCCTCACTGGGCGGGTTCCGGCTCGATTTGGAGGCGTaGTTATCCCAGCCTGATGTT +
Preference number: 5 (lower is better)
Translates to: TMSTLPPGPGRSSLGGFRLDLEA*LSQPDV
Trigger: AACATCAGGCTGGGATAACAACGCCTCCAAATCGAG...CCGGAACCCGCCCAGTGAGGACCTCCCAGGGCCTGGTGGCAGTGTGGACATAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586890.5
ENST00000588859.5
CDS TCA 90 bp TTCCATGGCTCATCCCCTCGATTTGGAGGCGTTGTTATCCCAGCCTaGTGTTTGGGGTCGCGTTCCAGCGGTGATCGCGGGAGTGTTCGC +
Preference number: 5 (lower is better)
Translates to: FHGSSPRFGGVVIPA*CLGSRSSGDRGSVR
Trigger: GCGAACACTCCCGCGATCACCGCTGGAACGCGACCCCAAACATCAGGCTGGGATAACAACGCCTCCAAATCGAGGGGATGAGCCATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS CCA 90 bp AAGCAGGGAAGCCCAGGCACTGAGGGGACAACCAGGCCACCTACCTaGAAGTTACCCTTGTGGGTGGTGAAGAGGCCTTCAAACTCGCTC +
Preference number: 5 (lower is better)
Translates to: KQGSPGTEGTTRPPT*KLPLWVVKRPSNSL
Trigger: GAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCCCTCAGTGCCTGGGCTTCCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS-3UTR CAA 90 bp GGCTCCACTGCCTGCATCGTCCCCCAGCAGCGCTCTGAGAGGACTTCCAGGGAACCTGAGCAGGATGGATaGGGCAGACAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: GSTACIVPQQRSERTSREPEQDG*GRQNQQ
Trigger: TTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGG...TTCCCTGGAAGTCCTCTCAGAGCGCTGCTGGGGGACGATGCAGGCAGTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CAA 90 bp TCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGATAGTGACCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SGHSVHGRKSWELGSRIVTWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGT...CACTATCCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CAA 90 bp GGGCAGACAAAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGAGAGAGGCCTGCAGTTaGGCTGCAAGAAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GQTKSAMPLLLREASPSLREACS*AARSRE
Trigger: TTCCCTGCTTCTTGCAGCCAAACTGCAGGCCTCTCT...CAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTTTGTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CAA 90 bp GCAACCATTTGTCCAGCACCAGATAGGTATCCTGGGCATGCTCACTGCCCACTGGCTTTGCTCTCGAACTaGGGGTCCGGGAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: ATICPAPDRYPGHAHCPLALLSN*GSGRLG
Trigger: GCCTAACCTCCCGGACCCCAAGTTCGAGAGCAAAGC...CAGTGGGCAGTGAGCATGCCCAGGATACCTATCTGGTGCTGGACAAATGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586890.5
ENST00000588859.5
ENST00000592375.6
CDS-3UTR CAA 90 bp TGGTTTCCTGAGCAGGATGGATTGGGCAGACAAAATCAGCAATGCCCCTGCTCCGCCAGCAAGGCCGCTTaGCTCTCGAACTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: WFPEQDGLGRQNQQCPCSASKAA*LSNLGS
Trigger: GGACCCCAAGTTCGAGAGCAAAGCGGCCTTGCTGGC...GGAGCAGGGGCATTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS TCA 90 bp CAGGGGCTCCACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTaGAGAAATAGCACCAACCTGCTCAGAGAGGCCTGCAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: QGLHHRQPSFWYSHS*RNSTNLLREACSLA
Trigger: AGCCAAACTGCAGGCCTCTCTGAGCAGGTTGGTGCTATTTCTTCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTGGAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS-3UTR CAA 90 bp GGCAGCTCAGGGCACAGTGTCCATGGACGCAAGAGCTGGGAGCTGGGGTCCAGGAAAAATACTGCAAGGTaGTGGTTTCCTGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: GSSGHSVHGRKSWELGSRKNTAR*WFPEQD
Trigger: ATCCTGCTCAGGAAACCACAACCTTGCAGTATTTTT...CCTGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592375.6
CDS-3UTR CAA 90 bp AGCTACAGACTGGAAGAGTCTGAACCTCTGACTCATCCCATGGATGGCTGCCCAAGCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SYRLEESEPLTHPMDGCPSWKLP*WVVKRP
Trigger: AGGCCTCTTCACCACCCACAAGGGTAACTTCCAGCT...TGGGCAGCCATCCATGGGATGAGTCAGAGGTTCAGACTCTTCCAGTCTGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CAA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGCCTGAGCAGGATGGATaGGGCAGACAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: KSAMPLLLREASPSLFHKPEQDG*GRQNQQ
Trigger: TTGCTGATTTTGTCTGCCCAATCCATCCTGCTCAGG...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS-3UTR CAA 90 bp TTTGCCCTTCCTGGGTGTACAGCTAAACTAAGTTTCCTGGCCTTTCATGTGACTGCTTTGCTCTCGAACTaGGGGTCCGGGAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: FALPGCTAKLSFLAFHVTALLSN*GSGRLG
Trigger: GCCTAACCTCCCGGACCCCAAGTTCGAGAGCAAAGC...AGTCACATGAAAGGCCAGGAAACTTAGTTTAGCTGTACACCCAGGAAGGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222139.11
CDS-3UTR CAA 90 bp AAATCAGCAATGCCCCTGCTCCTGAGAGAGGCCTCGCCATCCCTGTTCCATAAGAAAAATACTGCAAGGTaGTGGTTTCCTGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: KSAMPLLLREASPSLFHKKNTAR*WFPEQD
Trigger: ATCCTGCTCAGGAAACCACAACCTTGCAGTATTTTT...CTTATGGAACAGGGATGGCGAGGCCTCTCTCAGGAGCAGGGGCATTGCTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222139.11
ENST00000592375.6
CDS GCA 72 bp AGGCCGTGTCCCCCGCCGTCACCACTGGCGCACACCTaGCCACCCAGCGGCCAGCTGAGCTGGGCGCGGCGT +
Preference number: 6 (lower is better)
Translates to: RPCPPPSPLAHT*PPSGQLSWARR
Trigger: ACGCCGCGCCCAGCTCAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAGTGGTGACGGCGGGGGACACGGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS GCA 72 bp CCCGCCCCCGGCACAGTCCACAGCTGGGTCAGCAGCTaGCTCCGCCGGACGCAGCTGACCAGGCCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: PAPGTVHSWVSS*LRRTQLTRPFP
Trigger: CGGGAAGGGCCTGGTCAGCTGCGTCCGGCGGAGGCAGCTGCTGACCCAGCTGTGGACTGTGCCGGGGGCGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588681.5
CDS CCA 72 bp CTGGCGCACACCTGCCCACCCAGCGGCCAGCTGAGCTaGGCGCGGCGTTCAAGACCTCGAGCTCGGGACTGC +
Preference number: 6 (lower is better)
Translates to: LAHTCPPSGQLS*ARRSRPRARDC
Trigger: GCAGTCCCGAGCTCGAGGTCTTGAACGCCGCGCCCAGCTCAGCTGGCCGCTGGGTGGGCAGGTGTGCGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS GCA 72 bp GCGTGCCAGCCTCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ACQPRAGRRSCS*PGPPQRSPLPP
Trigger: GGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGAGGCTGGCACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588859.5
CDS CCA 72 bp CCCGTGATTCGCCCTGGCTCCTCCTACACCCCCGCCTaGGGCCTCACCGCTAGGCGTCAGCAGCGACACAGG +
Preference number: 6 (lower is better)
Translates to: PVIRPGSSYTPA*GLTARRQQRHR
Trigger: CCTGTGTCGCTGCTGACGCCTAGCGGTGAGGCCCCAGGCGGGGGTGTAGGAGGAGCCAGGGCGAATCACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590927.1
CDS GCA 72 bp AGCTGGGCGCGGCGTTCAAGACCTCGAGCTCGGGACTaGCAGCCCCGCCCCAGCCTTTGCTCTCGAACTTGG +
Preference number: 6 (lower is better)
Translates to: SWARRSRPRARD*QPRPSLCSRTW
Trigger: CCAAGTTCGAGAGCAAAGGCTGGGGCGGGGCTGGCAGTCCCGAGCTCGAGGTCTTGAACGCCGCGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS CCA 72 bp AGCACACACTCGGTGCGGCCCTCCAGGATCTCCACCTaGGGGCGGAATCAGGGCGAGGGACGCGTAGCAGAC +
Preference number: 6 (lower is better)
Translates to: STHSVRPSRIST*GRNQGEGRVAD
Trigger: GTCTGCTACGCGTCCCTCGCCCTGATTCCGCCCCCAGGTGGAGATCCTGGAGGGCCGCACCGAGTGTGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS GCA 72 bp ATGGCTCATCCTCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: MAHPRAGRRSCS*PGPPQRSPLPP
Trigger: GGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGAGGATGAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222139.11
ENST00000591958.5
ENST00000592375.6
CDS GCA 72 bp CAGAAGCGCACCGCACCACGAGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCATGGCTCATCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: QKRTAPRAVGAW*RRHSFHGSSSS
Trigger: GCTCGAGGATGAGCCATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGGTGCGCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222139.11
ENST00000591958.5
ENST00000592375.6
CDS GCA 72 bp AGTGACCACGATCGAGCTGGTAGGAGAAGCTGTAGTTaGCCGGGCCCACCCCAGCGCTCGCCGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: SDHDRAGRRSCS*PGPPQRSPLPP
Trigger: GGGAGGAAGCGGCGAGCGCTGGGGTGGGCCCGGGCAACTACAGCTTCTCCTACCAGCTCGATCGTGGTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586890.5
CDS GCA 72 bp CAGAAGCGCACCGCACCACGAGCCGTGGGAGCCTGGTaGAGGCGACACAGCTTCCATGGCTCATCCCCTCGA +
Preference number: 6 (lower is better)
Translates to: QKRTAPRAVGAW*RRHSFHGSSPR
Trigger: TCGAGGGGATGAGCCATGGAAGCTGTGTCGCCTGCACCAGGCTCCCACGGCTCGTGGTGCGGTGCGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS GCA 72 bp GGAAAACGGTGCCCCTCTGTACGCTCCCTGCGCCGTTaGCGGCCGAGACGTCCACCTCGTAGCGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: GKRCPSVRSLRR*RPRRPPRSGCE
Trigger: CTCACATCCGCTACGAGGTGGACGTCTCGGCCGGCAACGGCGCAGGGAGCGTACAGAGGGGCACCGTTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591958.5
CDS CCA 72 bp CCCTGGACCCGCAGGTTTCCCTCCAGTGACCACGACTaGAGGCGCCGTCGGGCCTCAAACAGCAGGGGACAT +
Preference number: 6 (lower is better)
Translates to: PWTRRFPSSDHD*RRRRASNSRGH
Trigger: ATGTCCCCTGCTGTTTGAGGCCCGACGGCGCCTCCAGTCGTGGTCACTGGAGGGAAACCTGCGGGTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588681.5
ENST00000589402.1
CDS TCA 72 bp CCTCCCAGAAACACACCAAGTCCTCCAACCGCTCGGTaGAGCACAGAAGCTCTTCGGGCCCCCGGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: PPRNTPSPPTAR*STEALRAPGPP
Trigger: TGGCGGCCCGGGGGCCCGAAGAGCTTCTGTGCTTCACCGAGCGGTTGGAGGACTTGGTGTGTTTCTGGGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000222139.11
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
ENST00000591958.5
ENST00000592375.6
CDS CAA 90 bp CCAGGCACTGAGGGGACAACCAGGCCACCTACCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PGTEGTTRPPTWKLP*WVVKRPSNSLSGLG
Trigger: CCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCCCTCAGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS TCA 72 bp TCATCCCCTCGATTTGGAGGCGTTGTTATCCCAGCCTaGTGTTTGGGGTCGCGTTCCAGCGGTGATCGCGGG +
Preference number: 6 (lower is better)
Translates to: SSPRFGGVVIPA*CLGSRSSGDRG
Trigger: CCCGCGATCACCGCTGGAACGCGACCCCAAACATCAGGCTGGGATAACAACGCCTCCAAATCGAGGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS TCA 72 bp CCAGGCCACCTACCTGGAAGTTACCCTTGTGGGTGGTaGAGAGGCCTTCAAACTCGCTCTCTGGGCTCGGGA +
Preference number: 6 (lower is better)
Translates to: PGHLPGSYPCGW*RGLQTRSLGSG
Trigger: TCCCGAGCCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS CCA 72 bp CTCGATTTGGAGGCGTTGTTATCCCAGCCTGATGTTTaGGGTCGCGTTCCAGCGGTGATCGCGGGAGTGTTC +
Preference number: 6 (lower is better)
Translates to: LDLEALLSQPDV*GRVPAVIAGVF
Trigger: GAACACTCCCGCGATCACCGCTGGAACGCGACCCCAAACATCAGGCTGGGATAACAACGCCTCCAAATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1
CDS CCA 72 bp GGGACAACCAGGCCACCTACCTGGAAGTTACCCTTGTaGGTGGTGAAGAGGCCTTCAAACTCGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GTTRPPTWKLPL*VVKRPSNSLSG
Trigger: CCCAGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS CAA 72 bp GAGGGGACAACCAGGCCACCTACCTGGAAGTTACCCTaGTGGGTGGTGAAGAGGCCTTCAAACTCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: EGTTRPPTWKLP*WVVKRPSNSLS
Trigger: AGAGAGCGAGTTTGAAGGCCTCTTCACCACCCACAAGGGTAACTTCCAGGTAGGTGGCCTGGTTGTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS TCA 72 bp CACCACAGGCAGCCATCATTCTGGTACAGCCACAGCTaGAGAAATAGCACCAACCTGCTCAGAGAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: HHRQPSFWYSHS*RNSTNLLREAC
Trigger: GCAGGCCTCTCTGAGCAGGTTGGTGCTATTTCTTCAGCTGTGGCTGTACCAGAATGATGGCTGCCTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590927.1
ENST00000592375.6
CDS CAA 72 bp ACAGCTTCCATGGCTCATCCCCTCGATTTGGAGGCGTaGTTATCCCAGCCTGATGTTTGGGGTCGCGTTCCA +
Preference number: 6 (lower is better)
Translates to: TASMAHPLDLEA*LSQPDVWGRVP
Trigger: TGGAACGCGACCCCAAACATCAGGCTGGGATAACAACGCCTCCAAATCGAGGGGATGAGCCATGGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586890.5
ENST00000588681.5
ENST00000588859.5
ENST00000589402.1