RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196411

Ensembl transcript IDs: ENST00000358173.8, ENST00000360620.7, ENST00000477446.5, ENST00000478459.5, ENST00000487222.5, ENST00000489808.1, ENST00000492403.1, ENST00000492878.1, ENST00000616502.4

Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTACCATGTCCGATGAGATACTGTCCGTGTTTGTCCGAATATTCTaGTTCTCTCCCATTGCTCTGCTTCCTGAGGCAGAGAACTGCGAC +
Preference number: 1 (lower is better)
Translates to: STMSDEILSVFVRIF*FSPIALLPEAENCD
Trigger: GTCGCAGTTCTCTGCCTCAGGAAGCAGAGCAATGGGAGAGAAGCAGAATATTCGGACAAACACGGACAGTATCTCATCGGACATGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR GCA 90 bp GGGAGTTCCTGCAGGTCAGTACTGCGGGGCCGGTCCTCCTGTCCCACCCGGGGTCACCCACGACTGCCGTaGCCGCAATCAGGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GSSCRSVLRGRSSCPTRGHPRLP*PQSGPA
Trigger: AGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTG...ACCCCGGGTGGGACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGGAACTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR TCA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR TCA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCACATTGCTCTGCTTCCTaGGGCAGAGAACTGCGACCA +
Preference number: 2 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSHCSAS*GRELRP
Trigger: TGGTCGCAGTTCTCTGCCTCAGGAAGCAGAGCAATG...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGLCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCGGGGTCCGGGGATGTaGGATGACCAAGGCACTGTT +
Preference number: 2 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVRGPGM*DDQGTV
Trigger: AACAGTGCCTTGGTCATCCCACATCCCCGGACCCCG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR TCA 90 bp GGGAGTTCCTGCAGGTCAGTACTGCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCGGGGATGTGGGATaGCCAAGGCACTGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GSSCRSVLRGRSSCPTRGSGDVG*PRHCSG
Trigger: TCCAGAACAGTGCCTTGGTCATCCCACATCCCCGGA...ACCCCGGGTGGGACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGGAACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR GCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCCCACGGGCTCAAAGTaGAATCCAGCGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPPTGSK*NPAGHR
Trigger: CCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGAACTGCGACCACAATaGCCACCAGGACCAGGACCA +
Preference number: 2 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPELRPQ*PPGPGP
Trigger: TGGTCCTGGTCCTGGTGGTCATTGTGGTCGCAGTTC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR GCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTC +
Preference number: 2 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTAIRAS*SRQPSL
Trigger: GAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCAGGCGCCCTCACCCTTaGTCTGGAGTTCCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTRRPHP*SGVPRG
Trigger: ACCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCT...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR TCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR TCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCAGTTGGGTCTGGCTGTaGTGTTCCTGGCCGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTSWVWL*CSWPKG
Trigger: GCCCTTCGGCCAGGAACATCACAGCCAGACCCAACT...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR GCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCCACGGGCTCAAAGTaGAATCCAGCGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTPTGSK*NPAGHR
Trigger: CCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCCTCACCCTTGGTCTaGAGTTCCCCGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTPSPLV*SSPRWL
Trigger: CAGCCACCTCGGGGAACTCCAGACCAAGGGTGAGGG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCCCCACTCTGGAGCTaGCAAGGGAGTCACACTCTC +
Preference number: 2 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTPPLWS*QGSHTL
Trigger: GAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGGG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR TCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETLCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCAGGCGCCCTCACCCTTaGTCTGGAGTTCCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSRRPHP*SGVPRG
Trigger: ACCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCT...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGGCACCTGGGGAGGCTaGGAGATGTTGGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSGTWGG*EMLGTS
Trigger: GGAAGTGCCCAACATCTCCCAGCCTCCCCAGGTGCC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCGGCACCTGGGGAGGCTaGGAGATGTTGGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: EPKPAAAKLSSYLPILMAGTWGG*EMLGTS
Trigger: GGAAGTGCCCAACATCTCCCAGCCTCCCCAGGTGCC...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACCCACGGGCTCAAAGTaGAATCCAGCGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETPTGSK*NPAGHR
Trigger: CCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR GCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGACCACACCCACGACTaGCGTGCCCGCAATCAGGGC +
Preference number: 2 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGDHTHD*RARNQG
Trigger: GCCCTGATTGCGGGCACGGCAGTCGTGGGTGTGGTC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGLCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCGGGGTCCGGGGATGTaGGATGACCAAGGCACTGTT +
Preference number: 2 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSRGPGM*DDQGTV
Trigger: AACAGTGCCTTGGTCATCCCACATCCCCGGACCCCG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAAGCTCTCCTTCTTCCCTaGGGCCTTGAGCCGCCCCCG +
Preference number: 2 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKALLLP*GLEPPP
Trigger: CGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACGCCCTCCAGGCGGATaGTATTGGGGTGCTCGAACT +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETRPPGG*YWGART
Trigger: AGTTCGAGCACCCCAATATCATCCGCCTGGAGGGCG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAAGGCGCCCTCACCCTTaGTCTGGAGTTCCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRRPHP*SGVPRG
Trigger: ACCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCT...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACGGGGTCCGGGGATGTaGGATGACCAAGGCACTGTT +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETRGPGM*DDQGTV
Trigger: AACAGTGCCTTGGTCATCCCACATCCCCGGACCCCG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCGAGTCACACTCTCTTTaGTCTGCGGGAACGCACCCA +
Preference number: 2 (lower is better)
Translates to: EPKPAAAKLSSYLPILMAESHSL*SAGTHP
Trigger: TGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTC...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACACCCTTCAGGGTCTTaGTTGCCACACAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETHPSGS*LPHSSP
Trigger: AGGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACTTTCCCCTCCTATTATaGCAGAACCCCCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYFPLLL*QNPQIL
Trigger: CAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAACACTCTCTTTGGTCTaGGGGAACGCACCCATCAAG +
Preference number: 2 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETTLSLV*GNAPIK
Trigger: CTTGATGGGTGCGTTCCCGCAGACCAAAGAGAGTGT...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR CAA 90 bp GGCACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTaGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAA +
Preference number: 2 (lower is better)
Translates to: GTVLETDMMMGPCFN*GKGGHSETGSLQHK
Trigger: TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGGCACCTGGGGAGGCTaGGAGATGTTGGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNGTWGG*EMLGTS
Trigger: GGAAGTGCCCAACATCTCCCAGCCTCCCCAGGTGCC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCCCCACTCTGGAGCTaGCAAGGGAGTCACACTCTC +
Preference number: 2 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPPLWS*QGSHTL
Trigger: GAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACTTTGTCACTGGGCCCTaGCACCCCTTCTTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNFVTGP*HPFLPP
Trigger: AGGGGGCAAGAAGGGGTGTCAGGGCCCAGTGACAAA...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACCCCCACTCTGGAGCTaGCAAGGGAGTCACACTCTC +
Preference number: 2 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETPPLWS*QGSHTL
Trigger: GAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGGG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR GCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACTTCAGGGTCTTGATTaGCACACAGCTCTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKLQGLD*HTALLL
Trigger: AAGAAGGAGAGCTGTGTGGCAATCAAGACCCTGAAG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAATTTCCCCTCCTATTATaGCAGAACCCCCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKFPLLL*QNPQIL
Trigger: CAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGAGTCACACTCTCTTTaGTCTGCGGGAACGCACCCA +
Preference number: 2 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETESHSL*SAGTHP
Trigger: TGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAATATGAAGGCAGCAGCTaGGGGAGGGGCATTTACAAG +
Preference number: 2 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEYEGSS*GRGIYK
Trigger: CTTGTAAATGCCCCTCCCCCAGCTGCTGCCTTCATA...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATATGAAGGCAGCAGCTaGGGGAGGGGCATTTACAAG +
Preference number: 2 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETYEGSS*GRGIYK
Trigger: CTTGTAAATGCCCCTCCCCCAGCTGCTGCCTTCATA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACTCTCTCCCATTGCTCTaGTTCCTGAGGCAGAGAACT +
Preference number: 2 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNSLPLL*FLRQRT
Trigger: AGTTCTCTGCCTCAGGAAGCAGAGCAATGGGAGAGA...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCAAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 3 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR GCA 72 bp ACACCCACGACTGCCGTGCCCGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTCTCATCCAGTTGGGTC +
Preference number: 3 (lower is better)
Translates to: TPTTAVPAIRAS*SRQPSLSSSWV
Trigger: GACCCAACTGGATGAGAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR CCA 72 bp GGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTaGCCTGGGACTTCATGTGCTGGACACTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: GPVLLSHPGFPA*PGTSCAGHWPR
Trigger: TCTTGGCCAGTGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGGAGTCACACTCTCTTaGGTCTGCGGGAACGCACCC +
Preference number: 3 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPGVTLS*VCGNAP
Trigger: GGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCTCGCTCTCATCCAGTaGGGTCTGGCTGTGATGTTC +
Preference number: 3 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGLALIQ*GLAVMF
Trigger: GAACATCACAGCCAGACCCAACTGGATGAGAGCGAG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR CCA 72 bp GGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTaGGACTTCATGTGCTGGACACTGGCCAAGATTTTC +
Preference number: 3 (lower is better)
Translates to: GPPVPPGVPGLA*DFMCWTLAKIF
Trigger: GAAAATCTTGGCCAGTGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR GCA 72 bp CCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTaGTGGACACTGGCCAAGATTTTCTTCTGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: PPGVPGLAWDFM*WTLAKIFFWCP
Trigger: GGGACACCAGAAGAAAATCTTGGCCAGTGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGGTGACAGCAGCAAGTaGGGACTACAAACCCCAATG +
Preference number: 3 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPGDSSK*GLQTPM
Trigger: CATTGGGGTTTGTAGTCCCAACTTGCTGCTGTCACC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCTTCATAGGACACAGCTaGGGGGTCCCAGGCGGGGTC +
Preference number: 3 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTFIGHS*GVPGGV
Trigger: GACCCCGCCTGGGACCCCCAAGCTGTGTCCTATGAA...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGGCCCCTGTTTCAACTaGGGCAAAGGAGGCCATAGT +
Preference number: 3 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTGPCFN*GKGGHS
Trigger: ACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACCCGGGGTTCCCGGCTaGGCCTGGGACTTCATGTGC +
Preference number: 3 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGPGVPG*AWDFMC
Trigger: GCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR CCA 72 bp GACTTCATGTGCTGGACACTGGCCAAGATTTTCTTCTaGTGTCCCGCCAGAGTGACTCCGATTCGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: DFMCWTLAKIFF*CPARVTPIRSR
Trigger: CCTGCTCCGAATCGGAGTCACTCTGGCGGGACACCAGAAGAAAATCTTGGCCAGTGTCCAGCACATGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGATTCATAGGACACAGCTaGGGGGTCCCAGGCGGGGTC +
Preference number: 3 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGFIGHS*GVPGGV
Trigger: GACCCCGCCTGGGACCCCCAAGCTGTGTCCTATGAA...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR TCA 72 bp CAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTaGTGGCCCGAAGCCACTCGCCCACAGAGCCAAAAG +
Preference number: 3 (lower is better)
Translates to: QRLRNFLRIFPF*WPEATRPQSQK
Trigger: CTTTTGGCTCTGTGGGCGAGTGGCTTCGGGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGGAGGCTGGGAGATGTaGGGCACTTCCTTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSGGWEM*GTSFSS
Trigger: AGAGGAAAAGGAAGTGCCCAACATCTCCCAGCCTCC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAAGGAGTCACACTCTCTTaGGTCTGCGGGAACGCACCC +
Preference number: 3 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKGVTLS*VCGNAP
Trigger: GGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCC...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGCCCCTGTTTCAACTaGGGCAAAGGAGGCCATAGT +
Preference number: 3 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETGPCFN*GKGGHS
Trigger: ACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 3 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCACCCTTCAGGGTCTaGATTGCCACACAGCTCTCC +
Preference number: 3 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPPFRV*IATQLS
Trigger: GGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR GCA 72 bp ATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTaGCAACTCCTCACCCCACGGGCTCAAAGTGCAATC +
Preference number: 3 (lower is better)
Translates to: IMAEPPNPVSPN*QLLTPRAQSAI
Trigger: GATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 3 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCAGACATCGATCTCTTTaGCAAATTCCCTCACAGCCT +
Preference number: 3 (lower is better)
Translates to: EPKPAAAKLSSYLPILMARHRSL*QIPSQP
Trigger: AGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTCT...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR-3UTR CAA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGGAGTCACACTCTCTTaGGTCTGCGGGAACGCACCC +
Preference number: 3 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNGVTLS*VCGNAP
Trigger: GGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAGGAGGCTGGGAGATGTaGGGCACTTCCTTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRGGWEM*GTSFSS
Trigger: AGAGGAAAAGGAAGTGCCCAACATCTCCCAGCCTCC...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR-3UTR CAA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGGTGACAGCAGCAAGTaGGGACTACAAACCCCAATG +
Preference number: 3 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETGDSSK*GLQTPM
Trigger: CATTGGGGTTTGTAGTCCCAACTTGCTGCTGTCACC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCAAGCGTGGCGTACACGTaGACGGCGCCCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSSVAYT*TAPRRG
Trigger: CCCACGGCGGGGCGCCGTCCACGTGTACGCCACGCT...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCAGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCTCTCCCTGGGCGGGTaGACGCCGATACTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVLSLGG*TPILRA
Trigger: CGCGCGGAGTATCGGCGTCCACCCGCCCAGGGAGAG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCAGGGCGCTTCCGGGTaGGATGCTCCGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGQGASG*DAPRPP
Trigger: CGGTGGCCGCGGAGCATCTCACCCGGAAGCGCCCTG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGAGACGTGGCTGGAGTTaGGGTCCCTCCGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVRRGWS*GPSGAS
Trigger: CGAGGCCCCGGAGGGACCCCAACTCCAGCCACGTCT...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp GGGAGTTCCTGCAGGTCAGTACTGCGGGGCCGGTCCTCCTGTCCCACCCGGGGTGCTCTCCTTCTTCCCTaGGGCCTTGAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSSCRSVLRGRSSCPTRGALLLP*GLEPPP
Trigger: CGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC...ACCCCGGGTGGGACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGGAACTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp GGGAGTTCCTGCAGGTCAGTACTGCGGGGCCGGTCCTCCTGTCCCACCCGGGGTAGAAGCCAGCCTTGCTaGGCGGTCCCAGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSSCRSVLRGRSSCPTRGRSQPC*AVPDAA
Trigger: CGCTGCGTCTGGGACCGCTCAGCAAGGCTGGCTTCT...ACCCCGGGTGGGACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGGAACTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCCACAGCTGCAGCCCGTaGCCGGCTGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLHSCSP*PAVRPT
Trigger: AGTGGGCCGAACAGCCGGTCACGGGCTGCAGCTGTG...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR GCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCACCCACGACTGCCGTaGCCGCAATCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVHPRLP*PQSGPA
Trigger: AGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCCATTCACCTTCCCGGTaGCCTCGGCCCCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLHSPSR*PRPQGA
Trigger: AGCGCCCTGGGGCCGAGGCCACCGGGAAGGTGAATG...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGGCTCTCCTTCTTCCCTaGGGCCTTGAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGALLLP*GLEPPP
Trigger: CGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCACAGCTGCAGCCCGTaGCCGGCTGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPHSCSP*PAVRPT
Trigger: AGTGGGCCGAACAGCCGGTCACGGGCTGCAGCTGTG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCAGCGGAGGGCGTAGGTaGGGTCCTCTCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPSGGRR*GPLGHQ
Trigger: CTGGTGGCCGAGAGGACCTCACCTACGCCCTCCGCT...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCGCCCTCCAGGCGGATaGTATTGGGGTGCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVRPPGG*YWGART
Trigger: AGTTCGAGCACCCCAATATCATCCGCCTGGAGGGCG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR GCA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLGVPLS*LEPRST
Trigger: TGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACC...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR GCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCGGCAAGGTACCGCATaGCCGAGGCGATGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPRQGTA*PRRCPA
Trigger: TGCGGGGCATCGCCTCGGGCATGCGGTACCTTGCCG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCACGGCAGTAGAGGCTaGGGCTGGGGCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTHGSRG*GWGQGR
Trigger: CCGCCCCTGGCCCCAGCCCCAGCCTCTACTGCCGTG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCAGAAGCCAGCCTTGCTaGGCGGTCCCAGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPRSQPC*AVPDAA
Trigger: CGCTGCGTCTGGGACCGCTCAGCAAGGCTGGCTTCT...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACATCCCTGGAGTGGCTCTaGTCGCGCCGCCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTSLEWL*SRRRAE
Trigger: CTCGGCCCGGCGGCGCGAGCAGAGCCACTCCAGGGA...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR GCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCCTGCAGGTCAGTACTaGGGGGCCGGTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPPAGQY*GAGPPV
Trigger: GACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCCCACGGGCTCAAAGTaGAATCCAGCGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGPTGSK*NPAGHR
Trigger: CCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCGACGGCGCCCCGCCGTaGGACCCAACCTGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTDGAPP*DPTCAK
Trigger: CTTCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTC...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGGGCTTGAAGGTGCCCTaGGCACAGGCTCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGGLKVP*AQARHL
Trigger: CAAGTGCCGAGCCTGTGCCCAGGGCACCTTCAAGCC...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAAGGGCGCTGACCACCTaGGGGAAGCGGGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTRALTT*GKRGRA
Trigger: TGCCCGGCCCCGCTTCCCCCAGGTGGTCAGCGCCCT...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATATGAAGGCAGCAGCTaGGGGAGGGGCATTTACAAG +
Preference number: 4 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSYEGSS*GRGIYK
Trigger: CTTGTAAATGCCCCTCCCCCAGCTGCTGCCTTCATA...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCGCCCTCCAGGCGGATaGTATTGGGGTGCTCGAACT +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGRPPGG*YWGART
Trigger: AGTTCGAGCACCCCAATATCATCCGCCTGGAGGGCG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCTCCCTGGAGTGGCTCTaGTCGCGCCGCCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTSLEWL*SRRRAE
Trigger: CTCGGCCCGGCGGCGCGAGCAGAGCCACTCCAGGGA...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR GCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGGGATAGCAGGGCCATaGAGGCACCCTGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPGIAGP*RHPGPG
Trigger: TCCAGGACCAGGGTGCCTGCATGGCCCTGCTATCCC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGGCACTCCATTCCAGGTaGAGGGAGGAGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGALHSR*REEPFR
Trigger: CCTGAACGGCTCCTCCCTGCACCTGGAATGGAGTGC...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCAGGCCAGGCTCAAGCTaGTGGGTGAGGACCGCGTCA +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPRPGSS*WVRTAS
Trigger: TGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCT...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCAGCCAAAGCCAGCGGCTaGGAAACTTTCTTCGTATCT +
Preference number: 4 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSAKASG*ETFFVS
Trigger: AGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGC...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGACGGCGCCCCGCCGTaGGACCCAACCTGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTDGAPP*DPTCAK
Trigger: CTTCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCAGCGTGGCGTACACGTaGACGGCGCCCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTSVAYT*TAPRRG
Trigger: CCCACGGCGGGGCGCCGTCCACGTGTACGCCACGCT...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCACGGCAGTAGAGGCTaGGGCTGGGGCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTHGSRG*GWGQGR
Trigger: CCGCCCCTGGCCCCAGCCCCAGCCTCTACTGCCGTG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGTACCCGACGCGGCACTaGCAGACGGCTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGYPTRH*QTADPM
Trigger: CATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTA...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGAGCCGAAGGAGGGGTaGTGCAGGGTGCACCCCGGG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTEPKEG*CRVHPG
Trigger: CCCGGGGTGCACCCTGCACCACCCCTCCTTCGGCTC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCGGGGTCCGGGGATGTaGGATGACCAAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGRGPGM*DDQGTV
Trigger: AACAGTGCCTTGGTCATCCCACATCCCCGGACCCCG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCAGGGCGCTTCCGGGTaGGATGCTCCGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYQGASG*DAPRPP
Trigger: CGGTGGCCGCGGAGCATCTCACCCGGAAGCGCCCTG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAAGCGGAGGGCGTAGGTaGGGTCCTCTCGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTSGGRR*GPLGHQ
Trigger: CTGGTGGCCGAGAGGACCTCACCTACGCCCTCCGCT...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACACGGGCATGCTGTTGGTaGCCACGCCCTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTRACCW*PRPPGG
Trigger: TCCGCCTGGAGGGCGTGGTCACCAACAGCATGCCCG...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCCATCACTGGCGGAAGTaGACTTCCGGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLHHWRK*TSGRQW
Trigger: CCATTGCCTTCCGGAAGTTCACTTCCGCCAGTGATG...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCTTTGTCACTGGGCCCTaGCACCCCTTCTTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPFVTGP*HPFLPP
Trigger: AGGGGGCAAGAAGGGGTGTCAGGGCCCAGTGACAAA...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGGGTCTCTTCCAAAGCTaGGGCCAACGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGGLFQS*GQRSPA
Trigger: TGCTGGGCTTCGTTGGCCGCAGCTTTGGAAGAGACC...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGACACTCTCTTTGGTCTaGGGGAACGCACCCATCAAG +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVTLSLV*GNAPIK
Trigger: CTTGATGGGTGCGTTCCCGCAGACCAAAGAGAGTGT...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCTCTCCCTGGGCGGGTaGACGCCGATACTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTLSLGG*TPILRA
Trigger: CGCGCGGAGTATCGGCGTCCACCCGCCCAGGGAGAG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCGTTCTCCATCCAGGCTaGCGTGAGGGCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTVLHPG*REGRGR
Trigger: ACGGCCACGGCCCTCACGCCAGCCTGGATGGAGAAC...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCTACCCGACGCGGCACTaGCAGACGGCTGATCCAATG +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPYPTRH*QTADPM
Trigger: CATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTA...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGAGCCGAAGGAGGGGTaGTGCAGGGTGCACCCCGGG +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTEPKEG*CRVHPG
Trigger: CCCGGGGTGCACCCTGCACCACCCCTCCTTCGGCTC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAGGGCGCTGACCACCTaGGGGAAGCGGGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRALTT*GKRGRA
Trigger: TGCCCGGCCCCGCTTCCCCCAGGTGGTCAGCGCCCT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGACCGGCGTCCGTTTCTaGGTTCCACCACCAACTACC +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGTGVRF*VPPPTT
Trigger: GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGT...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCTCTGCCCGGTTTTCTaGCGTCTTCAGGAACCGCAC +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPLCPVF*RLQEPH
Trigger: GTGCGGTTCCTGAAGACGTCAGAAAACCGGGCAGAG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACTCTTCCCTGGGGCCTTaGGCCGCCCCCGGCACACCT +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYSSLGP*AAPGTP
Trigger: AGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGA...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCACCCCGGGGGTCTGTaGGTGCCCGGAAGTACCCGA +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTHPGGL*VPGSTR
Trigger: TCGGGTACTTCCGGGCACGCACAGACCCCCGGGGTG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCACAGCCCCACTGGGTaGCCGGGGAACAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYHSPTG*PGNSPG
Trigger: GCCTGGGCTGTTCCCCGGGCACCCAGTGGGGCTGTG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCATGGGACGGGCCCCGTaGCTAAGGAGGATACCCCGT +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTMGRAP*LRRIPR
Trigger: ACGGGGTATCCTCCTTAGCCACGGGGCCCGTCCCAT...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCAGCACAGCCCCACTaGGTGCCCGGGGAACAGCCC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYPAQPH*VPGEQP
Trigger: GGGCTGTTCCCCGGGCACCCAGTGGGGCTGTGCTGG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCTGCACCAGGTAGCTaGCTCCCCGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTPAPGS*LPASAP
Trigger: GGGGGCTGAAGCGGGGAGCCAGCTACCTGGTGCAGG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCGGCACCTGGGGAGGCTaGGAGATGTTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTGTWGG*EMLGTS
Trigger: GGAAGTGCCCAACATCTCCCAGCCTCCCCAGGTGCC...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCACCGGCGTCCGTTTCTaGGTTCCACCACCAACTACC +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPTGVRF*VPPPTT
Trigger: GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGT...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGCGCCCTCGGCACTTaGTGTTCCCCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTGALGT*CSPQLP
Trigger: AGGCAGCTGAGGGGAACACCAAGTGCCGAGGGCGCC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
3UTR CAA 72 bp CCCCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTaGGTCTGCGGGAACGCACCCATCAAGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PHSGAGKGVTLS*VCGNAPIKVRG
Trigger: CCCCCTCACCTTGATGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGCACTCGAGCATGGTaGAGCGCAGCGTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTGTRAW*SAAWRT
Trigger: TGTACGCCACGCTGCGCTTCACCATGCTCGAGTGCC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCCAGACGCAGCGTCTTaGCATTCACCTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTPDAAS*HSPSRW
Trigger: CCACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYAIRAS*SRQPSL
Trigger: GAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGGCAAGGTACCGCATaGCCGAGGCGATGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRQGTA*PRRCPA
Trigger: TGCGGGGCATCGCCTCGGGCATGCGGTACCTTGCCG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAGACGTGGCTGGAGTTaGGGTCCCTCCGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRRGWS*GPSGAS
Trigger: CGAGGCCCCGGAGGGACCCCAACTCCAGCCACGTCT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCAGCGTGGCGTACACGTaGACGGCGCCCCGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSSVAYT*TAPRRG
Trigger: CCCACGGCGGGGCGCCGTCCACGTGTACGCCACGCT...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCAGAGTGGCTATTGGCTaGGCATGGCTGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTRVAIG*AWLAGP
Trigger: GGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCT...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCCAATGGTGTTAGAGTaGCTATTGGCTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGPMVLE*LLAGHG
Trigger: GCCATGCCCAGCCAATAGCCACTCTAACACCATTGG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAATGGGACGGGCCCCGTaGCTAAGGAGGATACCCCGT +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTMGRAP*LRRIPR
Trigger: ACGGGGTATCCTCCTTAGCCACGGGGCCCGTCCCAT...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCAGGGCGCTGACCACCTaGGGGAAGCGGGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EPKPAAAKLSSYLPILMARALTT*GKRGRA
Trigger: TGCCCGGCCCCGCTTCCCCCAGGTGGTCAGCGCCCT...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAAGGCGCCCTCACCCTTaGTCTGGAGTTCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTRRPHP*SGVPRG
Trigger: ACCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCT...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGCACCTGGGGAGGCTaGGAGATGTTGGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTGTWGG*EMLGTS
Trigger: GGAAGTGCCCAACATCTCCCAGCCTCCCCAGGTGCC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGAGTCACACTCTCTTTaGTCTGCGGGAACGCACCCA +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPESHSL*SAGTHP
Trigger: TGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGCTCAAGCTGCTGGGTaGGGACCGCGTCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYAQAAG*GPRHPD
Trigger: ATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCAGCAGAGATCTGGCTaGCCAGCTCGAAGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTQQRSG*PARRSQ
Trigger: TTGGCTCCTTCGAGCTGGTCAGCCAGATCTCTGCTG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR TCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGGTGTCCCGCCAGAGTaGCTCCGATTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTGVPPE*LRFGAG
Trigger: ACCTGCTCCGAATCGGAGTCACTCTGGCGGGACACC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGTCTCTCCCATTGCTCTaGTTCCTGAGGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGSLPLL*FLRQRT
Trigger: AGTTCTCTGCCTCAGGAAGCAGAGCAATGGGAGAGA...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGTTCTCCATCCAGGCTaGCGTGAGGGCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYVLHPG*REGRGR
Trigger: ACGGCCACGGCCCTCACGCCAGCCTGGATGGAGAAC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCCAATGGTGTTAGAGTaGCTATTGGCTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPPMVLE*LLAGHG
Trigger: GCCATGCCCAGCCAATAGCCACTCTAACACCATTGG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGTCATGTGCTGGACACTaGCCAAGATTTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVSCAGH*PRFSSG
Trigger: ACCAGAAGAAAATCTTGGCCAGTGTCCAGCACATGA...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCGTTCCCGGCTTGGCCTaGGACTTCATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTVPGLA*DFMCWT
Trigger: TGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAAC...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGCGGTGTCCCTGGGGTaGGGAGTTCCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYAVSLG*GVPAGQ
Trigger: CTGACCTGCAGGAACTCCCCACCCCAGGGACACCGC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCCACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGGCACTCGAGCATGGTaGAGCGCAGCGTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYGTRAW*SAAWRT
Trigger: TGTACGCCACGCTGCGCTTCACCATGCTCGAGTGCC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCCATCCAGGCTGGCGTaGGGGCCGTGGCCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANPSRLA*GPWPCP
Trigger: CGGACACGGCCACGGCCCTCACGCCAGCCTGGATGG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCACCCTTCAGGGTCTTaGTTGCCACACAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTHPSGS*LPHSSP
Trigger: AGGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCTTTGTCACTGGGCCCTaGCACCCCTTCTTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTFVTGP*HPFLPP
Trigger: AGGGGGCAAGAAGGGGTGTCAGGGCCCAGTGACAAA...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGGGATAGCAGGGCCATaGAGGCACCCTGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYGIAGP*RHPGPG
Trigger: TCCAGGACCAGGGTGCCTGCATGGCCCTGCTATCCC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCTCAGGAACCGCACGCTaGTGGGACCCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSSGTAR*WDPRRP
Trigger: AGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCCTGA...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAGGTCTGACTCTCCCTaGGCGGGTGGACGCCGATAC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRSDSP*AGGRRY
Trigger: GTATCGGCGTCCACCCGCCCAGGGAGAGTCAGACCT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGCACCCGGAGCTCCATaGCGCCGCCTCACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSAPGAP*RRLTRV
Trigger: TACCCGAGTGAGGCGGCGCCATGGAGCTCCGGGTGC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCACAGGCTCGGCACTTaGTGTTCCCCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTHRLGT*CSPQLP
Trigger: AGGCAGCTGAGGGGAACACCAAGTGCCGAGCCTGTG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCGGGGTTCCCGGCTTaGCCTGGGACTTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYPGFPA*PGTSCA
Trigger: AGCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGCACTGGCAGACGGCTaGTCCAATGGTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTALADG*SNGVRV
Trigger: CACTCTAACACCATTGGATCAGCCGTCTGCCAGTGC...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCTCTGCCCGGTTTTCTaGCGTCTTCAGGAACCGCAC +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTLCPVF*RLQEPH
Trigger: GTGCGGTTCCTGAAGACGTCAGAAAACCGGGCAGAG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGATCTTCCCTGGGGCCTTaGGCCGCCCCCGGCACACCT +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGSSLGP*AAPGTP
Trigger: AGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGA...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCCGGGGGTCTGTGCGTaGCCGGAAGTACCCGACGCG +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANPGVCA*PEVPDA
Trigger: CGCGTCGGGTACTTCCGGGCACGCACAGACCCCCGG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETAIRAS*SRQPSL
Trigger: GAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGACCACACCCACGACTaGCGTGCCCGCAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSDHTHD*RARNQG
Trigger: GCCCTGATTGCGGGCACGGCAGTCGTGGGTGTGGTC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGCAGCAAGACGTGGCTaGAGTTGGGGTCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSAARRG*SWGPSG
Trigger: CCCGGAGGGACCCCAACTCCAGCCACGTCTTGCTGC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACATTCACCTTCCCGGTaGCCTCGGCCCCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETHSPSR*PRPQGA
Trigger: AGCGCCCTGGGGCCGAGGCCACCGGGAAGGTGAATG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAGAGTGGCTATTGGCTaGGCATGGCTGGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRVAIG*AWLAGP
Trigger: GGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGAACCGCACGCTGCTaGGACCCTCGGCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETGTARC*DPRRPS
Trigger: AGAAGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACTCCTGACAGGGGCTTaGAGGTGCCCTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETLLTGA*RCPGHR
Trigger: CCTGTGCCCAGGGCACCTTCAAGCCCCTGTCAGGAG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGAACTGCGACCACAATaGCCACCAGGACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYELRPQ*PPGPGP
Trigger: TGGTCCTGGTCCTGGTGGTCATTGTGGTCGCAGTTC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCGGTGTCCCGCCAGAGTaGCTCCGATTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EPKPAAAKLSSYLPILMAGVPPE*LRFGAG
Trigger: ACCTGCTCCGAATCGGAGTCACTCTGGCGGGACACC...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTCACACCCAGTCCTaGGGGAAAGGCGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETGHTQS*GKGALT
Trigger: GGTGAGGGCGCCTTTCCCTCAGGACTGGGTGTGACC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACA +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSGVPLS*LEPRST
Trigger: TGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCGGGGGTCTGTGCGTaGCCGGAAGTACCCGACGCG +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPGVCA*PEVPDA
Trigger: CGCGTCGGGTACTTCCGGGCACGCACAGACCCCCGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANAIRAS*SRQPSL
Trigger: GAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACACCCACGACTGCCGTaGCCGCAATCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETHPRLP*PQSGPA
Trigger: AGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGACCACACCCACGACTaGCGTGCCCGCAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETDHTHD*RARNQG
Trigger: GCCCTGATTGCGGGCACGGCAGTCGTGGGTGTGGTC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACGGCAAGGTACCGCATaGCCGAGGCGATGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRQGTA*PRRCPA
Trigger: TGCGGGGCATCGCCTCGGGCATGCGGTACCTTGCCG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGCACCCGGAGCTCCATaGCGCCGCCTCACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANAPGAP*RRLTRV
Trigger: TACCCGAGTGAGGCGGCGCCATGGAGCTCCGGGTGC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCATTCACCTTCCCGGTaGCCTCGGCCCCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANHSPSR*PRPQGA
Trigger: AGCGCCCTGGGGCCGAGGCCACCGGGAAGGTGAATG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGCTCTCCTTCTTCCCTaGGGCCTTGAGCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGALLLP*GLEPPP
Trigger: CGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCCCTCACCCTTGGTCTaGAGTTCCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSPSPLV*SSPRWL
Trigger: CAGCCACCTCGGGGAACTCCAGACCAAGGGTGAGGG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGAGTCACACTCTCTTTaGTCTGCGGGAACGCACCCA +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTESHSL*SAGTHP
Trigger: TGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCCCAGACGCAGCGTCTTaGCATTCACCTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPKPAAAKLSSYLPILMAPDAAS*HSPSRW
Trigger: CCACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGG...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAAGAAGCCAGCCTTGCTaGGCGGTCCCAGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRSQPC*AVPDAA
Trigger: CGCTGCGTCTGGGACCGCTCAGCAAGGCTGGCTTCT...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCAGTTGGGTCTGGCTGTaGTGTTCCTGGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSSWVWL*CSWPKG
Trigger: GCCCTTCGGCCAGGAACATCACAGCCAGACCCAACT...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAATCAGGAACCGCACGCTaGTGGGACCCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKSGTAR*WDPRRP
Trigger: AGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCCTGA...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGACCACACCCACGACTaGCGTGCCCGCAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANDHTHD*RARNQG
Trigger: GCCCTGATTGCGGGCACGGCAGTCGTGGGTGTGGTC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCTTCAGGGTCTTGATTaGCACACAGCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTLQGLD*HTALLL
Trigger: AAGAAGGAGAGCTGTGTGGCAATCAAGACCCTGAAG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCCTGCAGGTCAGTACTaGGGGGCCGGTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANPAGQY*GAGPPV
Trigger: GACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGCGCGCAGCAAGACGTaGCTGGAGTTGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANARSKT*LELGSL
Trigger: GAGGGACCCCAACTCCAGCCACGTCTTGCTGCGCGC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGTTCTCCATCCAGGCTaGCGTGAGGGCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANVLHPG*REGRGR
Trigger: ACGGCCACGGCCCTCACGCCAGCCTGGATGGAGAAC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACCAGGCTCAAGCTGCTaGGTGAGGACCGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGPGSSC*VRTASP
Trigger: GGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACTCCTCAGCAGAGATCTaGCTGACCAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYSSAEI*LTSSKE
Trigger: CTCCTTCGAGCTGGTCAGCCAGATCTCTGCTGAGGA...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGCGGTGTCCCTGGGGTaGGGAGTTCCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGAVSLG*GVPAGQ
Trigger: CTGACCTGCAGGAACTCCCCACCCCAGGGACACCGC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACCCTCACCCTTGGTCTaGAGTTCCCCGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETPSPLV*SSPRWL
Trigger: CAGCCACCTCGGGGAACTCCAGACCAAGGGTGAGGG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACACTGCCCGTCCACCTaGGGGAATGTCACCCACTTC +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETHCPST*GNVTHF
Trigger: GAAGTGGGTGACATTCCCTCAGGTGGACGGGCAGTG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCCACCGTGTCCACCTTaGTGTAGGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSPPCPP*CRGSPS
Trigger: GGATGGAGAACCCCTACATCAAGGTGGACACGGTGG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCTCAAAGGTATAGGTaGAGTCAGGACGTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYPQRYR*SQDVAL
Trigger: GAGGGCTACGTCCTGACTTCACCTATACCTTTGAGG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACA +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGGVPLS*LEPRST
Trigger: TGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCGACATCGATCTCTTTTaGAAATTCCCTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTDIDLF*KFPHSL
Trigger: GAGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTC...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCTGCAGGTCAGTACTaGGGGGCCGGTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPAGQY*GAGPPV
Trigger: GACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAAGGTCTGACTCTCCCTaGGCGGGTGGACGCCGATAC +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRSDSP*AGGRRY
Trigger: GTATCGGCGTCCACCCGCCCAGGGAGAGTCAGACCT...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACACGGCAGTAGAGGCTaGGGCTGGGGCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEHGSRG*GWGQGR
Trigger: CCGCCCCTGGCCCCAGCCCCAGCCTCTACTGCCGTG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACACAGGCTCGGCACTTaGTGTTCCCCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETHRLGT*CSPQLP
Trigger: AGGCAGCTGAGGGGAACACCAAGTGCCGAGCCTGTG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCAGGCTCAAGCTGCTaGGTGAGGACCGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPGSSC*VRTASP
Trigger: GGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCAAGATTTTCTTCTaGTGTCCCGCCAGAGTGACT +
Preference number: 4 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTAKIFF*CPARVT
Trigger: AGTCACTCTGGCGGGACACCAGAAGAAAATCTTGGC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGTTCCCGGCTTGGCCTaGGACTTCATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSVPGLA*DFMCWT
Trigger: TGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAAC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACATTTCCCCTCCTATTATaGCAGAACCCCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTFPLLL*QNPQIL
Trigger: CAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACACCCCCACTCTGGAGCTaGCAAGGGAGTCACACTCTC +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETPPLWS*QGSHTL
Trigger: GAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGGG...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAGGAACCGCACGCTGCTaGGACCCTCGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRGTARC*DPRRPR
Trigger: CCGAGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCC...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCACTGCCCGTCCACCTaGGGGAATGTCACCCACTTC +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANHCPST*GNVTHF
Trigger: GAAGTGGGTGACATTCCCTCAGGTGGACGGGCAGTG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACCATCCAGGCTGGCGTaGGGGCCGTGGCCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETPSRLA*GPWPCP
Trigger: CGGACACGGCCACGGCCCTCACGCCAGCCTGGATGG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACAGGGCGCTTCCGGGTaGGATGCTCCGCGGCCACCG +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETQGASG*DAPRPP
Trigger: CGGTGGCCGCGGAGCATCTCACCCGGAAGCGCCCTG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGAACTGCGACCACAATaGCCACCAGGACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETELRPQ*PPGPGP
Trigger: TGGTCCTGGTCCTGGTGGTCATTGTGGTCGCAGTTC...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCATTGCTCTGCTTCCTaGGGCAGAGAACTGCGACCA +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSHCSAS*GRELRP
Trigger: TGGTCGCAGTTCTCTGCCTCAGGAAGCAGAGCAATG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCGCCCTCCAGGCGGATaGTATTGGGGTGCTCGAACT +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANRPPGG*YWGART
Trigger: AGTTCGAGCACCCCAATATCATCCGCCTGGAGGGCG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCATCACTGGCGGAAGTaGACTTCCGGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSHHWRK*TSGRQW
Trigger: CCATTGCCTTCCGGAAGTTCACTTCCGCCAGTGATG...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAAGGCTTGAAGGTGCCCTaGGCACAGGCTCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKGLKVP*AQARHL
Trigger: CAAGTGCCGAGCCTGTGCCCAGGGCACCTTCAAGCC...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACCAGCACAGCCCCACTaGGTGCCCGGGGAACAGCCC +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEPAQPH*VPGEQP
Trigger: GGGCTGTTCCCCGGGCACCCAGTGGGGCTGTGCTGG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCGAGTCACACTCTCTTTaGTCTGCGGGAACGCACCCA +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSESHSL*SAGTHP
Trigger: TGGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTC...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCGGGGTCCGGGGATGTaGGATGACCAAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANRGPGM*DDQGTV
Trigger: AACAGTGCCTTGGTCATCCCACATCCCCGGACCCCG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACACAGCTGCAGCCCGTaGCCGGCTGTTCGGCCCACT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRHSCSP*PAVRPT
Trigger: AGTGGGCCGAACAGCCGGTCACGGGCTGCAGCTGTG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGAACTGCGACCACAATaGCCACCAGGACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANELRPQ*PPGPGP
Trigger: TGGTCCTGGTCCTGGTGGTCATTGTGGTCGCAGTTC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATCTTCCCTGGGGCCTTaGGCCGCCCCCGGCACACCT +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETSSLGP*AAPGTP
Trigger: AGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACAGCAGAGATCTGGCTaGCCAGCTCGAAGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGQQRSG*PARRSQ
Trigger: TTGGCTCCTTCGAGCTGGTCAGCCAGATCTCTGCTG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR GCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAAGCACTCCATTCCAGGTaGAGGGAGGAGCCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKALHSR*REEPFR
Trigger: CCTGAACGGCTCCTCCCTGCACCTGGAATGGAGTGC...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCACAGCCCCACTGGGTaGCCGGGGAACAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNHSPTG*PGNSPG
Trigger: GCCTGGGCTGTTCCCCGGGCACCCAGTGGGGCTGTG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAATCAGGAACCGCACGCTaGTGGGACCCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEESGTAR*WDPRRP
Trigger: AGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCCTGA...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGACGGCGCCCCGCCGTaGGACCCAACCTGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETDGAPP*DPTCAK
Trigger: CTTCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCTGCACCAGGTAGCTaGCTCCCCGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPAPGS*LPASAP
Trigger: GGGGGCTGAAGCGGGGAGCCAGCTACCTGGTGCAGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCCCCACTCTGGAGCTaGCAAGGGAGTCACACTCTC +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPPLWS*QGSHTL
Trigger: GAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGGGGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCTATGAAGGCAGCAGCTaGGGGAGGGGCATTTACAAG +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSYEGSS*GRGIYK
Trigger: CTTGTAAATGCCCCTCCCCCAGCTGCTGCCTTCATA...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAACCACCGTGTCCACCTTaGTGTAGGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKPPCPP*CRGSPS
Trigger: GGATGGAGAACCCCTACATCAAGGTGGACACGGTGG...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACTCCTGACAGGGGCTTaGAGGTGCCCTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRLLTGA*RCPGHR
Trigger: CCTGTGCCCAGGGCACCTTCAAGCCCCTGTCAGGAG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGCACTGGCAGACGGCTaGTCCAATGGTGTTAGAGTG +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGALADG*SNGVRV
Trigger: CACTCTAACACCATTGGATCAGCCGTCTGCCAGTGC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAGCTCAAGCTGCTGGGTaGGGACCGCGTCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRAQAAG*GPRHPD
Trigger: ATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGC...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCGGGCATGCTGTTGGTaGCCACGCCCTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNRACCW*PRPPGG
Trigger: TCCGCCTGGAGGGCGTGGTCACCAACAGCATGCCCG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACGGGCATGCTGTTGGTaGCCACGCCCTCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETRACCW*PRPPGG
Trigger: TCCGCCTGGAGGGCGTGGTCACCAACAGCATGCCCG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCATCACTGGCGGAAGTaGACTTCCGGAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANHHWRK*TSGRQW
Trigger: CCATTGCCTTCCGGAAGTTCACTTCCGCCAGTGATG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACGTATCTTCCCATTTTaGTGGCCCGAAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRIFPF*WPEATR
Trigger: GCGAGTGGCTTCGGGCCATCAAAATGGGAAGATACG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCGCTTCCGGGTGAGATaGTCCGCGGCCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNRFRVR*SAATVS
Trigger: GGACACGGTGGCCGCGGAGCATCTCACCCGGAAGCG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACACCCACGACTGCCGTaGCCGCAATCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEHPRLP*PQSGPA
Trigger: AGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGACATCGATCTCTTTTaGAAATTCCCTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYDIDLF*KFPHSL
Trigger: GAGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAGCAGCAAGACGTGGCTaGAGTTGGGGTCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEAARRG*SWGPSG
Trigger: CCCGGAGGGACCCCAACTCCAGCCACGTCTTGCTGC...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGCACCCGGAGCTCCATaGCGCCGCCTCACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNAPGAP*RRLTRV
Trigger: TACCCGAGTGAGGCGGCGCCATGGAGCTCCGGGTGC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGGAACCGCACGCTGCTaGGACCCTCGGCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETGTARC*DPRRPS
Trigger: AGAAGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCCTGCACCAGGTAGCTaGCTCCCCGCTTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNPAPGS*LPASAP
Trigger: GGGGGCTGAAGCGGGGAGCCAGCTACCTGGTGCAGG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAGCGGTGTCCCTGGGGTaGGGAGTTCCTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEAVSLG*GVPAGQ
Trigger: CTGACCTGCAGGAACTCCCCACCCCAGGGACACCGC...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRLCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEELCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAGGTGTCCCGCCAGAGTaGCTCCGATTCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRGVPPE*LRFGAG
Trigger: ACCTGCTCCGAATCGGAGTCACTCTGGCGGGACACC...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACATCTCTCCCATTGCTCTaGTTCCTGAGGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETSLPLL*FLRQRT
Trigger: AGTTCTCTGCCTCAGGAAGCAGAGCAATGGGAGAGA...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAACACTCTCTTTGGTCTaGGGGAACGCACCCATCAAG +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGTLSLV*GNAPIK
Trigger: CTTGATGGGTGCGTTCCCGCAGACCAAAGAGAGTGT...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAATCCTCAGCAGAGATCTaGCTGACCAGCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKSSAEI*LTSSKE
Trigger: CTCCTTCGAGCTGGTCAGCCAGATCTCTGCTGAGGA...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCTGGGACTTCATGTGCTaGACACTGGCCAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSWDFMC*TLAKIF
Trigger: GAAAATCTTGGCCAGTGTCCAGCACATGAAGTCCCA...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCTCTGCCCCGGAAAATaGGGAGGCGGTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNLCPGK*GGGVPG
Trigger: CCCAGGGACACCGCCTCCCCATTTTCCGGGGCAGAG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAGGCGCCCTCACCCTTaGTCTGGAGTTCCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRRRPHP*SGVPRG
Trigger: ACCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCT...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR CAA 72 bp TATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATaGCCAACTCCTCACCCCACGGGCTCAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: YYGRTPKSCLSK*PTPHPTGSKCN
Trigger: ATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACACTGCCCGTCCACCTaGGGGAATGTCACCCACTTC +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEHCPST*GNVTHF
Trigger: GAAGTGGGTGACATTCCCTCAGGTGGACGGGCAGTG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCAGACGCAGCGTCTTaGCATTCACCTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPDAAS*HSPSRW
Trigger: CCACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCTCACCTCTTCAATCTTaGCGTAGGAGACATCGATCT +
Preference number: 4 (lower is better)
Translates to: EPKPAAAKLSSYLPILMASPLQS*RRRHRS
Trigger: AGATCGATGTCTCCTACGTCAAGATTGAAGAGGTGA...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGGGATAGCAGGGCCATaGAGGCACCCTGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETGIAGP*RHPGPG
Trigger: TCCAGGACCAGGGTGCCTGCATGGCCCTGCTATCCC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGGCCAGGCTCAAGCTaGTGGGTGAGGACCGCGTCA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNRPGSS*WVRTAS
Trigger: TGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCT...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACGCCAAAGCCAGCGGCTaGGAAACTTTCTTCGTATCT +
Preference number: 4 (lower is better)
Translates to: FPLLLWQNPQILSLQIANAKASG*ETFFVS
Trigger: AGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGC...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGCCAAGATTTTCTTCTaGTGTCCCGCCAGAGTGACT +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGAKIFF*CPARVT
Trigger: AGTCACTCTGGCGGGACACCAGAAGAAAATCTTGGC...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCCGGGGTTCCCGGCTTaGCCTGGGACTTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNPGFPA*PGTSCA
Trigger: AGCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACCACCGTGTCCACCTTaGTGTAGGGGTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEPPCPP*CRGSPS
Trigger: GGATGGAGAACCCCTACATCAAGGTGGACACGGTGG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGTTGGGTCTGGCTGTaGTGTTCCTGGCCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNSWVWL*CSWPKG
Trigger: GCCCTTCGGCCAGGAACATCACAGCCAGACCCAACT...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACATCACCTCTTCAATCTTaGCGTAGGAGACATCGATCT +
Preference number: 4 (lower is better)
Translates to: DMMMGPCFNLGKGGHSETSPLQS*RRRHRS
Trigger: AGATCGATGTCTCCTACGTCAAGATTGAAGAGGTGA...TGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAATCCGGGGATGTGGGATaGCCAAGGCACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEESGDVG*PRHCSG
Trigger: TCCAGAACAGTGCCTTGGTCATCCCACATCCCCGGA...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCGGATGTCAGACACTaGAGGAGGTACCTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPDVRH*RRYLSV
Trigger: GACCGAGAGGTACCTCCTGCAGTGTCTGACATCCGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACTTCAGGGTCTTGATTaGCACACAGCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGLQGLD*HTALLL
Trigger: AAGAAGGAGAGCTGTGTGGCAATCAAGACCCTGAAG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACTCTGCCCGGTTTTCTaGCGTCTTCAGGAACCGCAC +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETLCPVF*RLQEPH
Trigger: GTGCGGTTCCTGAAGACGTCAGAAAACCGGGCAGAG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACATTGCTCTGCTTCCTaGGGCAGAGAACTGCGACCA +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEHCSAS*GRELRP
Trigger: TGGTCGCAGTTCTCTGCCTCAGGAAGCAGAGCAATG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACACCCTTCAGGGTCTTaGTTGCCACACAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEHPSGS*LPHSSP
Trigger: AGGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACACCCTTCAGGGTCTTaGTTGCCACACAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRHPSGS*LPHSSP
Trigger: AGGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACTCCGGGGATGTGGGATaGCCAAGGCACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNSGDVG*PRHCSG
Trigger: TCCAGAACAGTGCCTTGGTCATCCCACATCCCCGGA...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATCCGGGGATGTGGGATaGCCAAGGCACTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETSGDVG*PRHCSG
Trigger: TCCAGAACAGTGCCTTGGTCATCCCACATCCCCGGA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGGTCTCTTCCAAAGCTaGGGCCAACGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNGLFQS*GQRSPA
Trigger: TGCTGGGCTTCGTTGGCCGCAGCTTTGGAAGAGACC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACCGGATGTCAGACACTaGAGGAGGTACCTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETPDVRH*RRYLSV
Trigger: GACCGAGAGGTACCTCCTGCAGTGTCTGACATCCGG...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CCA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGATCATGTGCTGGACACTaGCCAAGATTTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGSCAGH*PRFSSG
Trigger: ACCAGAAGAAAATCTTGGCCAGTGTCCAGCACATGA...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGTTCCCGGCTTGGCCTaGGACTTCATGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNVPGLA*DFMCWT
Trigger: TGTCCAGCACATGAAGTCCCAGGCCAAGCCGGGAAC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAACCGGCGTCCGTTTCTaGGTTCCACCACCAACTACC +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETTGVRF*VPPPTT
Trigger: GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGT...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
3UTR CAA 72 bp ACCTTAGTACCATGTCCGATGAGATACTGTCCGTGTTaGTCCGAATATTCTGCTTCTCTCCCATTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TLVPCPMRYCPC*SEYSASLPLLC
Trigger: GCAGAGCAATGGGAGAGAAGCAGAATATTCGGACAAACACGGACAGTATCTCATCGGACATGGTACTAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCATTGCTCTGCTTCCTaGGGCAGAGAACTGCGACCA +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNHCSAS*GRELRP
Trigger: TGGTCGCAGTTCTCTGCCTCAGGAAGCAGAGCAATG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCGTATCTTCCCATTTTaGTGGCCCGAAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNRIFPF*WPEATR
Trigger: GCGAGTGGCTTCGGGCCATCAAAATGGGAAGATACG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR TCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCCTCAAAGGTATAGGTaGAGTCAGGACGTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNPQRYR*SQDVAL
Trigger: GAGGGCTACGTCCTGACTTCACCTATACCTTTGAGG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR GCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGCCTGGGACTTCATGTaGTGGACACTGGCCAAGATT +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETAWDFM*WTLAKI
Trigger: AATCTTGGCCAGTGTCCAGCACATGAAGTCCCAGGC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACACACTCTCTTTGGTCTaGGGGAACGCACCCATCAAG +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNTLSLV*GNAPIK
Trigger: CTTGATGGGTGCGTTCCCGCAGACCAAAGAGAGTGT...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACCACTTCCTTTTCCTCTaGTCACACCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNHFLFL*SHPVLR
Trigger: CCTCAGGACTGGGTGTGACCAGAGGAAAAGGAAGTG...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACTTCAGGGTCTTGATTaGCACACAGCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEELQGLD*HTALLL
Trigger: AAGAAGGAGAGCTGTGTGGCAATCAAGACCCTGAAG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACGCCAAGATTTTCTTCTaGTGTCCCGCCAGAGTGACT +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNAKIFF*CPARVT
Trigger: AGTCACTCTGGCGGGACACCAGAAGAAAATCTTGGC...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAATGGGACTTCATGTGCTaGACACTGGCCAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEWDFMC*TLAKIF
Trigger: GAAAATCTTGGCCAGTGTCCAGCACATGAAGTCCCA...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR TCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGATCACCTCTTCAATCTTaGCGTAGGAGACATCGATCT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRSPLQS*RRRHRS
Trigger: AGATCGATGTCTCCTACGTCAAGATTGAAGAGGTGA...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGATCATGTGCTGGACACTaGCCAAGATTTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRSCAGH*PRFSSG
Trigger: ACCAGAAGAAAATCTTGGCCAGTGTCCAGCACATGA...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATGGGACTTCATGTGCTaGACACTGGCCAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETWDFMC*TLAKIF
Trigger: GAAAATCTTGGCCAGTGTCCAGCACATGAAGTCCCA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATTTCCCCTCCTATTATaGCAGAACCCCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETFPLLL*QNPQIL
Trigger: CAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CCA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACTTTCCCCTCCTATTATaGCAGAACCCCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNFPLLL*QNPQIL
Trigger: CAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGACATCGATCTCTTTTaGAAATTCCCTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETDIDLF*KFPHSL
Trigger: GAGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTC...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS GCA 90 bp GCGTGGCGTACACGTGGACGGCGCCCCGCCGTGGGACCCAACCTGTaGGAAGCCAGTGGGCCTGGCCCGGGGCACGCTGCACGTCACACA +
Preference number: 5 (lower is better)
Translates to: AWRTRGRRPAVGPNL*EASGPGPGHAARHT
Trigger: TGTGTGACGTGCAGCGTGCCCCGGGCCAGGCCCACTGGCTTCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTCCACGTGTACGCCACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS-3UTR CAA 90 bp GCGGGGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCAAAGACGTGGCTGGAGTaGGGGTCCCTCCGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AGPVLLSHPGFPAWPGTSKTWLE*GSLRGL
Trigger: GAGGCCCCGGAGGGACCCCAACTCCAGCCACGTCTT...TGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS GCA 90 bp CTGCTGGGACCCTCGGCGCCCTCGGCACTTGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACAGCTGCAGCCCGTGACCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LLGPSAPSALGVPLS*LEPRSTAAARDRLF
Trigger: GAACAGCCGGTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACCAAGTGCCGAGGGCGCCGAGGGTCCCAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489808.1
ENST00000616502.4
CDS-3UTR CAA 90 bp GCTCTCCTTCTTCCCTGGGGCCTTGAGCCGCCCCCGGCACACCTCGCCAAACTCTTCTTCCCTGGGGCCTaGAGCCGCCCCCGGCACACC +
Preference number: 5 (lower is better)
Translates to: ALLLPWGLEPPPAHLAKLFFPGA*SRPRHT
Trigger: GGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAA...GAGTTTGGCGAGGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAAGGAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS GCA 90 bp CAGCCCCACTGGGTGCCCGGGGAACAGCCCAGGCCAGGCTCAAGCTaGTGGGTGAGGACCGCGTCACCCGGATGTCAGACACTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QPHWVPGEQPRPGSS*WVRTASPGCQTLQE
Trigger: CTCCTGCAGTGTCTGACATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCTGGGCTGTTCCCCGGGCACCCAGTGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CCA 90 bp AGGGACAGGCACTCGAGCATGGTGAAGCGCAGCGTGGCGTACACGTaGACGGCGCCCCGCCGTGGGACCCAACCTGTGCGAAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RDRHSSMVKRSVAYT*TAPRRGTQPVRSQW
Trigger: CCACTGGCTTCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTCCACGTGTACGCCACGCTGCGCTTCACCATGCTCGAGTGCCTGTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS TCA 90 bp TGTTCCCCTCAGCTGCCTCGAACCCCGGAGCACAGCTGCAGCCCGTaGCCGGCTGTTCGGCCCACTGGCCATCCTCACGGCAGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: CSPQLPRTPEHSCSP*PAVRPTGHPHGSRG
Trigger: GCCTCTACTGCCGTGAGGATGGCCAGTGGGCCGAACAGCCGGTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS GCA 90 bp GAAGGTGCCCTGGGCACAGGCTCGGCACTTGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACAGCTGCAGCCCGTGACCGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: EGALGTGSALGVPLS*LEPRSTAAARDRLF
Trigger: GAACAGCCGGTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACCAAGTGCCGAGCCTGTGCCCAGGGCACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
CDS CCA 90 bp CCCCACTGGGTGCCCGGGGAACAGCCCAGGCCAGGCTCAAGCTGCTaGGTGAGGACCGCGTCACCCGGATGTCAGACACTGCAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PHWVPGEQPRPGSSC*VRTASPGCQTLQEV
Trigger: TACCTCCTGCAGTGTCTGACATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCTGGGCTGTTCCCCGGGCACCCAGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS-3UTR CAA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCTTCTTCCCTGGGGCCTaGAGCCGCCCCCGGCACACC +
Preference number: 5 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPFFPGA*SRPRHT
Trigger: GGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAA...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS TCA 90 bp ACTGGGTGCCCGGGGAACAGCCCAGGCCAGGCTCAAGCTGCTGGGTaGGGACCGCGTCACCCGGATGTCAGACACTGCAGGAGGTACCTC +
Preference number: 5 (lower is better)
Translates to: TGCPGNSPGQAQAAG*GPRHPDVRHCRRYL
Trigger: GAGGTACCTCCTGCAGTGTCTGACATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCTGGGCTGTTCCCCGGGCACCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS GCA 90 bp AGTGGGCCTGGCCCGGGGCACGCTGCACGTCACACACTTCGTAGGTaGGCACGCTGTGCTGTTCCTCATCCAGGCCGCTCAGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SGPGPGHAARHTLRR*ARCAVPHPGRSVPP
Trigger: GGGAGGAACTGAGCGGCCTGGATGAGGAACAGCACAGCGTGCGCACCTACGAAGTGTGTGACGTGCAGCGTGCCCCGGGCCAGGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS GCA 90 bp ACCAGGACCACACCCACGACTGCCGTGCCCGCAATCAGGGCCAGCTaGTCCCGCCAGCCCTCGCTCTCTGCGGAAGGAAAGGCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: TRTTPTTAVPAIRAS*SRQPSLSAEGKAAD
Trigger: ATCAGCAGCCTTTCCTTCCGCAGAGAGCGAGGGCTGGCGGGAGCAGCTGGCCCTGATTGCGGGCACGGCAGTCGTGGGTGTGGTCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478459.5
CDS-3UTR CAA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGACGGTGAAGGTCTCCTaGCAGGAGCGCCCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGTVKVS*QERPAR
Trigger: TCGGGCTGGGCGCTCCTGCAAGGAGACCTTCACCGT...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGCCCAGACGCAGCGTCTaGACATTCACCTTCCCGGTG +
Preference number: 5 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVPRRSV*TFTFPV
Trigger: CACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGGG...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CAA 90 bp GGCCGGTCCTCCTGTCCCACCCGGGGTTCCCGGCTTGGCCTGGGACTTCATGTGGGAGTCACACTCTCTTaGGTCTGCGGGAACGCACCC +
Preference number: 5 (lower is better)
Translates to: GRSSCPTRGSRLGLGLHVGVTLS*VCGNAP
Trigger: GGGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCC...CACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGGTGGGACAGGAGGACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS TCA 90 bp CAGCTGCTCCCGCCAGCCCTCGCTCTCTGCGGAAGGAAAGGCTGCTaGTCAGGAGAAACTGATGGTCCTGTAGGAGGCCCCAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: QLLPPALALCGRKGC*SGETDGPVGGPSPG
Trigger: GCCGGGGCTGGGGCCTCCTACAGGACCATCAGTTTCTCCTGATCAGCAGCCTTTCCTTCCGCAGAGAGCGAGGGCTGGCGGGAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478459.5
CDS CCA 90 bp GCACCCCGGGGGTCTGTGCGTGCCCGGAAGTACCCGACGCGGCACTaGCAGACGGCTGATCCAATGGTGTTAGAGTGGCTATTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: APRGSVRARKYPTRH*QTADPMVLEWLLAG
Trigger: CCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTACTTCCGGGCACGCACAGACCCCCGGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS-3UTR CAA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCACGGTGAAGGTCTCCTaGCAGGAGCGCCCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPTVKVS*QERPAR
Trigger: TCGGGCTGGGCGCTCCTGCAAGGAGACCTTCACCGT...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS GCA 90 bp TGCCTCGGGCTGTCCGCAGCCCAGAGCAAGCGCAGGCTCCCTTTCTaGGTCCCAGCTCAGCTGCAGCCACGCTTTGATCTGTCAGTTCGC +
Preference number: 5 (lower is better)
Translates to: CLGLSAAQSKRRLPF*VPAQLQPRFDLSVR
Trigger: GCGAACTGACAGATCAAAGCGTGGCTGCAGCTGAGCTGGGACGCAGAAAGGGAGCCTGCGCTTGCTCTGGGCTGCGGACAGCCCGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS TCA 90 bp TATTGGCTGGGCATGGCTGGCAGGACCCTTCTCCTGACAGGGGCTTaGAGGTGCCCTGGGCACAGGCTCGGCACTTGGTGTTCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: YWLGMAGRTLLLTGA*RCPGHRLGTWCSPQ
Trigger: CTGAGGGGAACACCAAGTGCCGAGCCTGTGCCCAGGGCACCTTCAAGCCCCTGTCAGGAGAAGGGTCCTGCCAGCCATGCCCAGCCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
CDS CCA 90 bp AATGAGAGCTGCGCCCTGGTCCTGACCCCCACGAGCAGAGGCTGCTaGTGTGGGAGGGGAACCTCTTGTCTCAGCCTCCACGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NESCALVLTPTSRGC*CGRGTSCLSLHVSS
Trigger: GGAGGAAACGTGGAGGCTGAGACAAGAGGTTCCCCTCCCACACCAGCAGCCTCTGCTCGTGGGGGTCAGGACCAGGGCGCAGCTCTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS-3UTR CAA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACATCCCGGGCCACGATTTaGAGGCTGGCGGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTSRATI*RLAGFR
Trigger: CCGGAACCCCGCCAGCCTCAAAATCGTGGCCCGGGA...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACACCCGGGGTTCCCGGCTaGGCCTGGGACTTCATGTGC +
Preference number: 5 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTPGVPG*AWDFMC
Trigger: GCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGG...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GGGAGTTCCTGCAGGTCAGTACTGCGGGGCCGGTCCTCCTGTCCCACCCGGGGTCAAACCCCAATGATTTaGTCACTGGGCCCTGACACC +
Preference number: 5 (lower is better)
Translates to: GSSCRSVLRGRSSCPTRGQTPMI*SLGPDT
Trigger: GGTGTCAGGGCCCAGTGACAAAATCATTGGGGTTTG...ACCCCGGGTGGGACAGGAGGACCGGCCCCGCAGTACTGACCTGCAGGAACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCGGCGCCCTCGGCACTaGGTGTTCCCCTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTRRPRH*VFPSAA
Trigger: GGCAGCTGAGGGGAACACCAAGTGCCGAGGGCGCCG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS TCA 90 bp GTCTGTGCGTGCCCGGAAGTACCCGACGCGGCACTGGCAGACGGCTaGTCCAATGGTGTTAGAGTGGCTATTGGCTGGGCATGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VCACPEVPDAALADG*SNGVRVAIGWAWLA
Trigger: TGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTACTTCCGGGCACGCACAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CCA 90 bp TACCCGACGCGGCACTGGCAGACGGCTGATCCAATGGTGTTAGAGTaGCTATTGGCTGGGCATGGCTGGCAGGACCCTTCTCCTGACAGG +
Preference number: 5 (lower is better)
Translates to: YPTRHWQTADPMVLE*LLAGHGWQDPSPDR
Trigger: CCTGTCAGGAGAAGGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACTCCCGGGCCACGATTTaGAGGCTGGCGGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYSRATI*RLAGFR
Trigger: CCGGAACCCCGCCAGCCTCAAAATCGTGGCCCGGGA...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCGGGGTTCCCGGCTaGGCCTGGGACTTCATGTGC +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYPGVPG*AWDFMC
Trigger: GCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGG...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGCCCGGAGGCTGGGAGATGTaGGGCACTTCCTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: EPLQAPASVSGFHHQLPPGGWEM*GTSFSS
Trigger: AGAGGAAAAGGAAGTGCCCAACATCTCCCAGCCTCC...GGGCGGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACAGGGCTGGGGCAAACCCCAATGATTTaGTCACTGGGCCCTGACACC +
Preference number: 5 (lower is better)
Translates to: QLLTPRAQSAIQRGTGLGQTPMI*SLGPDT
Trigger: GGTGTCAGGGCCCAGTGACAAAATCATTGGGGTTTG...CCCCAGCCCTGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS CCA 90 bp ACGGCTGATCCAATGGTGTTAGAGTGGCTATTGGCTGGGCATGGCTaGCAGGACCCTTCTCCTGACAGGGGCTTGAAGGTGCCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TADPMVLEWLLAGHG*QDPSPDRGLKVPWA
Trigger: TGCCCAGGGCACCTTCAAGCCCCTGTCAGGAGAAGGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACACGGTGAAGGTCTCCTaGCAGGAGCGCCCAGCCCGA +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYTVKVS*QERPAR
Trigger: TCGGGCTGGGCGCTCCTGCAAGGAGACCTTCACCGT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACACCCAGACGCAGCGTCTaGACATTCACCTTCCCGGTG +
Preference number: 5 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTPRRSV*TFTFPV
Trigger: CACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGGG...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCCACCCTTCAGGGTCTaGATTGCCACACAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTPPFRV*IATQLS
Trigger: GGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTGG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCCCAGACGCAGCGTCTaGACATTCACCTTCCCGGTG +
Preference number: 5 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTPRRSV*TFTFPV
Trigger: CACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGGG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCTCGCTCTCATCCAGTaGGGTCTGGCTGTGATGTTC +
Preference number: 5 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTLALIQ*GLAVMF
Trigger: GAACATCACAGCCAGACCCAACTGGATGAGAGCGAG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACTTCATAGGACACAGCTaGGGGGTCCCAGGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYFIGHS*GVPGGV
Trigger: GACCCCGCCTGGGACCCCCAAGCTGTGTCCTATGAA...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp ATGATGGGCCCCTGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: MMGPCFNLGKGGHSETGSKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...GGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp CCACTCTGGAGCTGGCAAGGGAGTCACACTCTCTTTGGTCTGCGGGAACGCACCCAAACCCCAATGATTTaGTCACTGGGCCCTGACACC +
Preference number: 5 (lower is better)
Translates to: PLWSWQGSHTLFGLRERTQTPMI*SLGPDT
Trigger: GGTGTCAGGGCCCAGTGACAAAATCATTGGGGTTTG...GGTGCGTTCCCGCAGACCAAAGAGAGTGTGACTCCCTTGCCAGCTCCAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACAAGACGTGGCTGGAGTaGGGGTCCCTCCGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: FPLLLWQNPQILSLQIANKTWLE*GSLRGL
Trigger: GAGGCCCCGGAGGGACCCCAACTCCAGCCACGTCTT...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CAA 90 bp CCAAATTGCCAACTCCTCACCCCACGGGCTCAAAGTGCAATCCAGCGGGGCACATCGTATCTTCCCATTTaGATGGCCCGAAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: PNCQLLTPRAQSAIQRGTSYLPI*MARSHS
Trigger: CGAGTGGCTTCGGGCCATCAAAATGGGAAGATACGA...TGTGCCCCGCTGGATTGCACTTTGAGCCCGTGGGGTGAGGAGTTGGCAATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCGGAGGCTGGGAGATGTaGGGCACTTCCTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTGGWEM*GTSFSS
Trigger: AGAGGAAAAGGAAGTGCCCAACATCTCCCAGCCTCC...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACAAGGCGCCCTCACCCTaGGTCTGGAGTTCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: FPLLLWQNPQILSLQIANKAPSP*VWSSPR
Trigger: CCTCGGGGAACTCCAGACCAAGGGTGAGGGCGCCTT...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACGGTGACAGCAGCAAGTaGGGACTACAAACCCCAATG +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYGDSSK*GLQTPM
Trigger: CATTGGGGTTTGTAGTCCCAACTTGCTGCTGTCACC...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GAGCCAAAGCCAGCGGCTGCGAAACTTTCTTCGTATCTTCCCATTTTGATGGCCCTCGCTCTCATCCAGTaGGGTCTGGCTGTGATGTTC +
Preference number: 5 (lower is better)
Translates to: EPKPAAAKLSSYLPILMALALIQ*GLAVMF
Trigger: GAACATCACAGCCAGACCCAACTGGATGAGAGCGAG...GGCCATCAAAATGGGAAGATACGAAGAAAGTTTCGCAGCCGCTGGCTTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616502.4
CDS-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCCAGCAGTTTCCAATTTaGTGTTCAGCAGGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTQQFPI*CSAGSL
Trigger: AAGAGACCCTGCTGAACACAAAATTGGAAACTGCTG...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATTCTTCCCTGGGGCCTaGAGCCGCCCCCGGCACACC +
Preference number: 5 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETFFPGA*SRPRHT
Trigger: GGTGTGCCGGGGGCGGCTCAAGGCCCCAGGGAAGAA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCCGGGGTTCCCGGCTaGGCCTGGGACTTCATGTGC +
Preference number: 5 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPGVPG*AWDFMC
Trigger: GCACATGAAGTCCCAGGCCAAGCCGGGAACCCCGGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp ACTGTTCTGGAAACAGACATGATGATGGGCCCCTGTTTCAACTTGGGCAAAGGACGGTCAGTGGTGACATaGACAGGCTCAAATGGGACG +
Preference number: 5 (lower is better)
Translates to: TVLETDMMMGPCFNLGKGRSVVT*TGSNGT
Trigger: CGTCCCATTTGAGCCTGTCAATGTCACCACTGACCG...TCCTTTGCCCAAGTTGAAACAGGGGCCCATCATCATGTCTGTTTCCAGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CAA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCGGTCAGTGGTGACATaGACAGGCTCAAATGGGACG +
Preference number: 5 (lower is better)
Translates to: FPLLLWQNPQILSLQIANRSVVT*TGSNGT
Trigger: CGTCCCATTTGAGCCTGTCAATGTCACCACTGACCG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000360620.7
CDS-3UTR CAA 90 bp TTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACCAGATACTGTCCGTGTTaGTCCGAATATTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LRTPPSTGVRFWVPPPTTRYCPC*SEYSAS
Trigger: AGAAGCAGAATATTCGGACAAACACGGACAGTATCT...GGTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATCCCGGGCCACGATTTaGAGGCTGGCGGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETSRATI*RLAGFR
Trigger: CCGGAACCCCGCCAGCCTCAAAATCGTGGCCCGGGA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTAAGAACCCCTCCAAGCACCGGCGTCCGTTTCTGGGTTCCACCACCAACTACAGATACTGTCCGTGTTaGTCCGAATATTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FKNPSKHRRPFLGSTTNYRYCPC*SEYSAS
Trigger: AGAAGCAGAATATTCGGACAAACACGGACAGTATCT...GTAGTTGGTGGTGGAACCCAGAAACGGACGCCGGTGCTTGGAGGGGTTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TGTTTCAACTTGGGCAAAGGAGGCCATAGTGAAACAGGTTCCCTCCAACACAAAGGTGACAGCAGCAAGTaGGGACTACAAACCCCAATG +
Preference number: 5 (lower is better)
Translates to: CFNLGKGGHSETGSLQHKGDSSK*GLQTPM
Trigger: CATTGGGGTTTGTAGTCCCAACTTGCTGCTGTCACC...TTTGTGTTGGAGGGAACCTGTTTCACTATGGCCTCCTTTGCCCAAGTTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACATTCATAGGACACAGCTaGGGGGTCCCAGGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETFIGHS*GVPGGV
Trigger: GACCCCGCCTGGGACCCCCAAGCTGTGTCCTATGAA...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACCACCCTTCAGGGTCTaGATTGCCACACAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEPPFRV*IATQLS
Trigger: GGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTGG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACCACCCTTCAGGGTCTaGATTGCCACACAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRPPFRV*IATQLS
Trigger: GGAGAGCTGTGTGGCAATCAAGACCCTGAAGGGTGG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTTCCCCTCCTATTATGGCAGAACCCCCAAATCCTGTCTCTCCAAATTGCCAACCAGCAGTTTCCAATTTaGTGTTCAGCAGGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: FPLLLWQNPQILSLQIANQQFPI*CSAGSL
Trigger: AAGAGACCCTGCTGAACACAAAATTGGAAACTGCTG...GTTGGCAATTTGGAGAGACAGGATTTGGGGGTTCTGCCATAATAGGAGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGACTCGCTCTCATCCAGTaGGGTCTGGCTGTGATGTTC +
Preference number: 5 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRLALIQ*GLAVMF
Trigger: GAACATCACAGCCAGACCCAACTGGATGAGAGCGAG...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAGGCCCCTGTTTCAACTaGGGCAAAGGAGGCCATAGT +
Preference number: 5 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEGPCFN*GKGGHS
Trigger: ACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCC...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAGGCCCCTGTTTCAACTaGGGCAAAGGAGGCCATAGT +
Preference number: 5 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRGPCFN*GKGGHS
Trigger: ACTATGGCCTCCTTTGCCCAAGTTGAAACAGGGGCC...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACTCGTATCTTCCCATTTaGATGGCCCGAAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNSYLPI*MARSHS
Trigger: CGAGTGGCTTCGGGCCATCAAAATGGGAAGATACGA...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS-3UTR CAA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAACAGCAGTTTCCAATTTaGTGTTCAGCAGGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEEQQFPI*CSAGSL
Trigger: AAGAGACCCTGCTGAACACAAAATTGGAAACTGCTG...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp AGGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAGACATCGATCTCTTTaGCAAATTCCCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: RFPPTQSYDKDGRKTKRRRHRSL*QIPSQP
Trigger: AGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTCT...TCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp GGTTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAAGACATCGATCTCTTTaGCAAATTCCCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: GSLQHKVMTRTVEKQNEERHRSL*QIPSQP
Trigger: AGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTCT...TTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TTCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAGACATCGATCTCTTTaGCAAATTCCCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: FPPTQSYDKDGRKTKRRNRHRSL*QIPSQP
Trigger: AGGCTGTGAGGGAATTTGCAAAAGAGATCGATGTCT...GTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAAGTTATGACAAGGACGGTAGAAAAACAAAACGAAGAAACAAGATACTGTCCGTGTTaGTCCGAATATTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLQHKVMTRTVEKQNEETRYCPC*SEYSAS
Trigger: AGAAGCAGAATATTCGGACAAACACGGACAGTATCT...TGTTTCTTCGTTTTGTTTTTCTACCGTCCTTGTCATAACTTTGTGTTGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS GCA 72 bp TCCCTGGAGTGGCTCTGCTCGCGCCGCCGGGCCGAGTaGTCTCCTCGCGGGCGGGGATGGTGGGAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: SLEWLCSRRRAE*SPRGRGWWEPE
Trigger: CTCGGGCTCCCACCATCCCCGCCCGCGAGGAGAGCACTCGGCCCGGCGGCGCGAGCAGAGCCACTCCAGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358173.8
ENST00000616502.4
CDS TCA 72 bp GCCCAGCCCGAGGCAGGGACAGGCACTCGAGCATGGTaGAGCGCAGCGTGGCGTACACGTGGACGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: AQPEAGTGTRAW*SAAWRTRGRRP
Trigger: GGGGCGCCGTCCACGTGTACGCCACGCTGCGCTTCACCATGCTCGAGTGCCTGTCCCTGCCTCGGGCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS TCA 72 bp CAGCTGCCTCGAACCCCGGAGCACAGCTGCAGCCCGTaGCCGGCTGTTCGGCCCACTGGCCATCCTCACGGC +
Preference number: 6 (lower is better)
Translates to: QLPRTPEHSCSP*PAVRPTGHPHG
Trigger: GCCGTGAGGATGGCCAGTGGGCCGAACAGCCGGTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS GCA 72 bp CCCTCGGCGCCCTCGGCACTTGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACAGCTGCAGCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: PSAPSALGVPLS*LEPRSTAAARD
Trigger: GTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACCAAGTGCCGAGGGCGCCGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489808.1
ENST00000616502.4
CDS CCA 72 bp CACTCGAGCATGGTGAAGCGCAGCGTGGCGTACACGTaGACGGCGCCCCGCCGTGGGACCCAACCTGTGCGA +
Preference number: 6 (lower is better)
Translates to: HSSMVKRSVAYT*TAPRRGTQPVR
Trigger: TCGCACAGGTTGGGTCCCACGGCGGGGCGCCGTCCACGTGTACGCCACGCTGCGCTTCACCATGCTCGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS TCA 72 bp CCGGGGAACAGCCCAGGCCAGGCTCAAGCTGCTGGGTaGGGACCGCGTCACCCGGATGTCAGACACTGCAGG +
Preference number: 6 (lower is better)
Translates to: PGNSPGQAQAAG*GPRHPDVRHCR
Trigger: CCTGCAGTGTCTGACATCCGGGTGACGCGGTCCTCACCCAGCAGCTTGAGCCTGGCCTGGGCTGTTCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS GCA 72 bp CTGGGCACAGGCTCGGCACTTGGTGTTCCCCTCAGCTaGCTCGAACCCCGGAGCACAGCTGCAGCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: LGTGSALGVPLS*LEPRSTAAARD
Trigger: GTCACGGGCTGCAGCTGTGCTCCGGGGTTCGAGGCAGCTGAGGGGAACACCAAGTGCCGAGCCTGTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
CDS CCA 72 bp TGCGCCCTGGTCCTGACCCCCACGAGCAGAGGCTGCTaGTGTGGGAGGGGAACCTCTTGTCTCAGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: CALVLTPTSRGC*CGRGTSCLSLH
Trigger: GTGGAGGCTGAGACAAGAGGTTCCCCTCCCACACCAGCAGCCTCTGCTCGTGGGGGTCAGGACCAGGGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CCA 72 bp CCCGGTTTTCTGACGTCTTCAGGAACCGCACGCTGCTaGGACCCTCGGCGCCCTCGGCACTTGGTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: PGFLTSSGTARC*DPRRPRHLVFP
Trigger: GGGGAACACCAAGTGCCGAGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCCTGAAGACGTCAGAAAACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489808.1
ENST00000616502.4
CDS CAA 72 bp AAGCCAGCCTTGCTGAGCGGTCCCAGACGCAGCGTCTaGACATTCACCTTCCCGGTGGCCTCGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: KPALLSGPRRSV*TFTFPVASAPG
Trigger: CCCTGGGGCCGAGGCCACCGGGAAGGTGAATGTCAAGACGCTGCGTCTGGGACCGCTCAGCAAGGCTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000489808.1
ENST00000616502.4
CDS TCA 72 bp GGCATGGCTGGCAGGACCCTTCTCCTGACAGGGGCTTaGAGGTGCCCTGGGCACAGGCTCGGCACTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GMAGRTLLLTGA*RCPGHRLGTWC
Trigger: ACACCAAGTGCCGAGCCTGTGCCCAGGGCACCTTCAAGCCCCTGTCAGGAGAAGGGTCCTGCCAGCCATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
CDS TCA 72 bp CCTCCAGCTAGGGGTCAGATGGGAAGCCAGCCAGCCTaGGGTGAGAGGCGCAAGGTCCCCATGGGTGGCAAG +
Preference number: 6 (lower is better)
Translates to: PPARGQMGSQPA*GERRKVPMGGK
Trigger: CTTGCCACCCATGGGGACCTTGCGCCTCTCACCTCAGGCTGGCTGGCTTCCCATCTGACCCCTAGCTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS GCA 72 bp AGGCGCAAGGTCCCCATGGGTGGCAAGAGACAGCCCTaGTCACTGGGGACAGGATGCCCGGGTTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: RRKVPMGGKRQP*SLGTGCPGSGK
Trigger: CTTCCCAGAACCCGGGCATCCTGTCCCCAGTGAGCAGGGCTGTCTCTTGCCACCCATGGGGACCTTGCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS GCA 72 bp CTGCCCGGTTTTCTGACGTCTTCAGGAACCGCACGCTaGTGGGACCCTCGGCGCCCTCGGCACTTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: LPGFLTSSGTAR*WDPRRPRHLVF
Trigger: GAACACCAAGTGCCGAGGGCGCCGAGGGTCCCAGCAGCGTGCGGTTCCTGAAGACGTCAGAAAACCGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489808.1
ENST00000616502.4
CDS CCA 72 bp CCAACGAAGCCCAGCAGAGCAGCACCCGGAGCTCCATaGCGCCGCCTCACTCGGGTAGGATCCGAACTGAGT +
Preference number: 6 (lower is better)
Translates to: PTKPSRAAPGAP*RRLTRVGSELS
Trigger: ACTCAGTTCGGATCCTACCCGAGTGAGGCGGCGCCATGGAGCTCCGGGTGCTGCTCTGCTGGGCTTCGTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000616502.4
CDS TCA 72 bp GCCCCCATCCCAGTACCTCCCTCCCCACGAGTGCCCTaGTCAGGAAGCACTGGAGGTCGGGATGCTAGGGTT +
Preference number: 6 (lower is better)
Translates to: APIPVPPSPRVP*SGSTGGRDARV
Trigger: AACCCTAGCATCCCGACCTCCAGTGCTTCCTGATCAGGGCACTCGTGGGGAGGGAGGTACTGGGATGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CCA 72 bp CCTGGTCCTGACCCCCACGAGCAGAGGCTGCTGGTGTaGGAGGGGAACCTCTTGTCTCAGCCTCCACGTTTC +
Preference number: 6 (lower is better)
Translates to: PGPDPHEQRLLV*EGNLLSQPPRF
Trigger: GAAACGTGGAGGCTGAGACAAGAGGTTCCCCTCCCACACCAGCAGCCTCTGCTCGTGGGGGTCAGGACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS TCA 72 bp CCGCCAGCCCTCGCTCTCTGCGGAAGGAAAGGCTGCTaGTCAGGAGAAACTGATGGTCCTGTAGGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PPALALCGRKGC*SGETDGPVGGP
Trigger: GGGGCCTCCTACAGGACCATCAGTTTCTCCTGATCAGCAGCCTTTCCTTCCGCAGAGAGCGAGGGCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478459.5
CDS CCA 72 bp GGGTCTGTGCGTGCCCGGAAGTACCCGACGCGGCACTaGCAGACGGCTGATCCAATGGTGTTAGAGTGGCTA +
Preference number: 6 (lower is better)
Translates to: GSVRARKYPTRH*QTADPMVLEWL
Trigger: TAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTACTTCCGGGCACGCACAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CAA 72 bp CTCTGCTTTCAGACCAAACACCCCGTCCTTCCCTCCTaGAAGGGAGCGCTCCGTGCCTGGGGCATAGCCCTG +
Preference number: 6 (lower is better)
Translates to: LCFQTKHPVLPS*KGALRAWGIAL
Trigger: CAGGGCTATGCCCCAGGCACGGAGCGCTCCCTTCAAGGAGGGAAGGACGGGGTGTTTGGTCTGAAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CAA 90 bp ACGCGGCACTGGCAGACGGCTGATCCAATGGTGTTAGAGTGGCTATaGGCTGGGCATGGCTGGCAGGACCCTTCTCCTGACAGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: TRHWQTADPMVLEWL*AGHGWQDPSPDRGL
Trigger: CAAGCCCCTGTCAGGAGAAGGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS TCA 72 bp TGCCCGGAAGTACCCGACGCGGCACTGGCAGACGGCTaGTCCAATGGTGTTAGAGTGGCTATTGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: CPEVPDAALADG*SNGVRVAIGWA
Trigger: TGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCGCGTCGGGTACTTCCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CCA 72 bp GTTCCCAGGCTCCCGCCGAGGCCTCACATCTGGATTTaGTTATGGGAAGGCAGAGGGGAGGAGATTCTGGGG +
Preference number: 6 (lower is better)
Translates to: VPRLPPRPHIWI*LWEGRGEEILG
Trigger: CCCCAGAATCTCCTCCCCTCTGCCTTCCCATAACCAAATCCAGATGTGAGGCCTCGGCGGGAGCCTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CAA 72 bp GGTTCCCAGGCTCCCGCCGAGGCCTCACATCTGGATTaGGTTATGGGAAGGCAGAGGGGAGGAGATTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSQAPAEASHLD*VMGRQRGGDSG
Trigger: CCCAGAATCTCCTCCCCTCTGCCTTCCCATAACCAAATCCAGATGTGAGGCCTCGGCGGGAGCCTGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CCA 72 bp CGGCACTGGCAGACGGCTGATCCAATGGTGTTAGAGTaGCTATTGGCTGGGCATGGCTGGCAGGACCCTTCT +
Preference number: 6 (lower is better)
Translates to: RHWQTADPMVLE*LLAGHGWQDPS
Trigger: AGAAGGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCAGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CCA 72 bp GCTAGGGTTCCCAGGCTCCCGCCGAGGCCTCACATCTaGATTTGGTTATGGGAAGGCAGAGGGGAGGAGATT +
Preference number: 6 (lower is better)
Translates to: ARVPRLPPRPHI*IWLWEGRGEEI
Trigger: AATCTCCTCCCCTCTGCCTTCCCATAACCAAATCCAGATGTGAGGCCTCGGCGGGAGCCTGGGAACCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487222.5
CDS CAA 72 bp GACACTGCAGGAGGTACCTCTCGGTCAGTGGTGACATaGACAGGCTCAAATGGGACGGGCCCCGTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: DTAGGTSRSVVT*TGSNGTGPVAK
Trigger: CTTAGCCACGGGGCCCGTCCCATTTGAGCCTGTCAATGTCACCACTGACCGAGAGGTACCTCCTGCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CAA 72 bp TGGCAGACGGCTGATCCAATGGTGTTAGAGTGGCTATaGGCTGGGCATGGCTGGCAGGACCCTTCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: WQTADPMVLEWL*AGHGWQDPSPD
Trigger: GTCAGGAGAAGGGTCCTGCCAGCCATGCCCAGCCAATAGCCACTCTAACACCATTGGATCAGCCGTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000487222.5
ENST00000492878.1
CDS CAA 90 bp CACCCTTCACCCCAAATCCCAGGTGAGAGAACACTCGAGGAAAGCTaGGTAGGACCACGGGACACTTACGTCCTGATTGCTCATGTCCCA +
Preference number: 6 (lower is better)
Translates to: HPSPQIPGERTLEES*VGPRDTYVLIAHVP
Trigger: TGGGACATGAGCAATCAGGACGTAAGTGTCCCGTGGTCCTACCAAGCTTTCCTCGAGTGTTCTCTCACCTGGGATTTGGGGTGAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492403.1
CDS CAA 72 bp CCCCAAATCCCAGGTGAGAGAACACTCGAGGAAAGCTaGGTAGGACCACGGGACACTTACGTCCTGATTGCT +
Preference number: 6 (lower is better)
Translates to: PQIPGERTLEES*VGPRDTYVLIA
Trigger: AGCAATCAGGACGTAAGTGTCCCGTGGTCCTACCAAGCTTTCCTCGAGTGTTCTCTCACCTGGGATTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492403.1
CDS CAA 72 bp GGAATGTCACCCACTTCAGATCAGCAGTTTCCAATTTaGTGTTCAGCAGGGTCTCTTCCAAAGCTGCGGCCA +
Preference number: 6 (lower is better)
Translates to: GMSPTSDQQFPI*CSAGSLPKLRP
Trigger: TGGCCGCAGCTTTGGAAGAGACCCTGCTGAACACAAAATTGGAAACTGCTGATCTGAAGTGGGTGACATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358173.8
ENST00000360620.7
ENST00000477446.5
ENST00000489808.1
ENST00000616502.4