RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41L5 (Homo sapiens)

Ensembl gene IDs: ENSG00000115109

Ensembl transcript IDs: ENST00000263713.10, ENST00000331393.8, ENST00000443124.5, ENST00000443902.6, ENST00000452780.1, ENST00000461128.1, ENST00000488691.1, ENST00000489017.5, ENST00000495030.1

Found 568 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACTCCGCAGGAACACAGCTGTGCTGGGGCTGCTGCTGCTGTACTaGGCCAGCAGAGCTGAGTGGGACAGTATTTACCATCTCTGGTCC +
Preference number: 1 (lower is better)
Translates to: GLRRNTAVLGLLLLY*ASRAEWDSIYHLWS
Trigger: GGACCAGAGATGGTAAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp ACAGCAGCCTGCATTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTaGGGTAAATGCCCCAGGGTCTCTTCAACAGTAACCCACCCCACT +
Preference number: 1 (lower is better)
Translates to: TAACILHRARRSADA*GKCPRVSSTVTHPT
Trigger: AGTGGGGTGGGTTACTGTTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAATGCAGGCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR GCA 90 bp CGGCTTTGTAAAGGGGACTCCGCAGGAACACAGCTGTGCTGGGGCTaGTGCTGCTGTACTGCGCCAGCAGAGCTGAGTGGGACAGTATTT +
Preference number: 1 (lower is better)
Translates to: RLCKGDSAGTQLCWG*CCCTAPAELSGTVF
Trigger: AAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCCTTTACAAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp AGTGTTGGCTGCCTCCAAGTGACAGGTAACACTGCAGAACCTATCTaGGGACCTGCCAGCCTCCCGTTTCACGCAGCCACTCTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: SVGCLQVTGNTAEPI*GPASLPFHAATLLL
Trigger: GAGCAGCAGAGTGGCTGCGTGAAACGGGAGGCTGGCAGGTCCTCAGATAGGTTCTGCAGTGTTACCTGTCACTTGGAGGCAGCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 90 bp TGTAAAGGGGACTCCGCAGGAACACAGCTGTGCTGGGGCTGCTGCTaGTGTACTGCGCCAGCAGAGCTGAGTGGGACAGTATTTACCATC +
Preference number: 1 (lower is better)
Translates to: CKGDSAGTQLCWGCC*CTAPAELSGTVFTI
Trigger: GATGGTAAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCCTTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 90 bp CTTTGTAAAGGGGACTCCGCAGGAACACAGCTGTGCTGGGGCTGCTaGTGCTGTACTGCGCCAGCAGAGCTGAGTGGGACAGTATTTACC +
Preference number: 1 (lower is better)
Translates to: LCKGDSAGTQLCWGC*CCTAPAELSGTVFT
Trigger: GGTAAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCCTTTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp CATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACTaGGTTGAGGTTCCTCTCCTGTCTGCCCGCAGGGAGGCAGCACTA +
Preference number: 1 (lower is better)
Translates to: HPVNSHFPYQGYEMD*VEVPLLSARREAAL
Trigger: TAGTGCTGCCTCCCTGCGGGCAGACAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 90 bp CTATCTGAGGACCTGCCAGCCTCCCGTTTCACGCAGCCACTCTGCTaGTCTACAAAGTTTCACATCAGGGGTCAGCGGCTTTGTAAAGGG +
Preference number: 1 (lower is better)
Translates to: LSEDLPASRFTQPLC*STKFHIRGQRLCKG
Trigger: CCCTTTACAAAGCCGCTGACCCCTGATGTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGTGAAACGGGAGGCTGGCAGGTCCTCAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp CACAGCTGTGCTGGGGCTGCTGCTGCTGTACTGCGCCAGCAGAGCTaGGTGGGACAGTATTTACCATCTCTGGTCCTTTACAGAACAAGA +
Preference number: 1 (lower is better)
Translates to: HSCAGAAAAVLRQQS*VGQYLPSLVLYRTR
Trigger: TCTTGTTCTGTAAAGGACCAGAGATGGTAAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp AATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTaGGACTACAGCAGCCTGCATTCTCCACCGGGCTCGGAGGAGTGC +
Preference number: 1 (lower is better)
Translates to: NRKQCGVLLCCAFIT*DYSSLHSPPGSEEC
Trigger: GCACTCCTCCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR GCA 90 bp AACCTATCTGAGGACCTGCCAGCCTCCCGTTTCACGCAGCCACTCTaGTGCTCTACAAAGTTTCACATCAGGGGTCAGCGGCTTTGTAAA +
Preference number: 1 (lower is better)
Translates to: NLSEDLPASRFTQPL*CSTKFHIRGQRLCK
Trigger: TTTACAAAGCCGCTGACCCCTGATGTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGTGAAACGGGAGGCTGGCAGGTCCTCAGATAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp TCACCAGCCTGCTTCTCACCCACTATCATCTCCAACCTTTCTCTTTaGACCCATCAAGGATGCCGGCACACATGCCTCTCTCTTCTCAAG +
Preference number: 1 (lower is better)
Translates to: SPACFSPTIISNLSL*THQGCRHTCLSLLK
Trigger: CTTGAGAAGAGAGAGGCATGTGTGCCGGCATCCTTGATGGGTTCAAAGAGAAAGGTTGGAGATGATAGTGGGTGAGAAGCAGGCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 90 bp CCCAACACGCATTTAATCTGTCGGGGCCAATTCAGCATTCAAGTATaGACTTCCGTGTTTGCCACTTCATGTCAGGGCATGAGACAAAGT +
Preference number: 1 (lower is better)
Translates to: PNTHLICRGQFSIQV*TSVFATSCQGMRQS
Trigger: ACTTTGTCTCATGCCCTGACATGAAGTGGCAAACACGGAAGTTCATACTTGAATGCTGAATTGGCCCCGACAGATTAAATGCGTGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 90 bp AATCTGTCGGGGCCAATTCAGCATTCAAGTATGAACTTCCGTGTTTaGCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTG +
Preference number: 1 (lower is better)
Translates to: NLSGPIQHSSMNFRV*HFMSGHETKFPLSL
Trigger: CAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCAAACACGGAAGTTCATACTTGAATGCTGAATTGGCCCCGACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CCA 90 bp GTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGTGGTaGGGGAATAATGGGCACCTTGTTCACAAACACAAACCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: VCLILLTSISLDGMW*GNNGHLVHKHKPSP
Trigger: AGGAGAAGGTTTGTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR TCA 90 bp TGGGACAGTATTTACCATCTCTGGTCCTTTACAGAACAAGACTGCTaGCTCCTCTCAATGACAAGACAAAAACTCTGCTTCTCGAGACTC +
Preference number: 1 (lower is better)
Translates to: WDSIYHLWSFTEQDC*LLSMTRQKLCFSRL
Trigger: GAGTCTCGAGAAGCAGAGTTTTTGTCTTGTCATTGAGAGGAGTCAGCAGTCTTGTTCTGTAAAGGACCAGAGATGGTAAATACTGTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATT +
Preference number: 1 (lower is better)
Translates to: KGNEVYVQIGNNVEY*CAVPSLPETTAACI
Trigger: AATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR CCA 90 bp TTAGTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGTaGTGGGGGAATAATGGGCACCTTGTTCACAAACACAAACCTTCT +
Preference number: 1 (lower is better)
Translates to: LVCLILLTSISLDGM*WGNNGHLVHKHKPS
Trigger: AGAAGGTTTGTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR CCA 90 bp TTATCATTGATGCTATATGGCTTCCTTGATTCCTTGTCCCTTTCATaGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCAC +
Preference number: 1 (lower is better)
Translates to: LSLMLYGFLDSLSLS*KNSITNSTEQLVTH
Trigger: GTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGAAAGGGACAAGGAATCAAGGAAGCCATATAGCATCAATGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR CCA 90 bp ATTTTAAAGGTTATACAGGATCAGATTATGAGACTGTTGCAAACCTaGGTAATCTGTCAGGTGTATGAGATGAAAGAGAAAAGCCAGTCA +
Preference number: 1 (lower is better)
Translates to: ILKVIQDQIMRLLQT*VICQVYEMKEKSQS
Trigger: TGACTGGCTTTTCTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATCCTGTATAACCTTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR CCA 90 bp AACATTTATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTaGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTGGACGGAAA +
Preference number: 1 (lower is better)
Translates to: NIYKSIESSRPNTLF*AAMQCDSTIPVGRK
Trigger: TTTCCGTCCAACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATAAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR TCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCAGGAGTGCAGATGCCTaGGGTAAATGCCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFRSADA*GKCPRV
Trigger: GACCCTGGGGCATTTACCTCAGGCATCTGCACTCCT...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGCATCCTTCTTCCCCATaGCAACCGAGGTTTACCTTG +
Preference number: 2 (lower is better)
Translates to: SPPPHRAPSEACTANPQQHPSSP*QPRFTL
Trigger: CAAGGTAAACCTCGGTTGCCATGGGGAAGAAGGATG...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCACACTAGTGTGCGTTTaGCTGGACACACGATTATGT +
Preference number: 2 (lower is better)
Translates to: PSEACTANPQQCPRLPLLTLVCV*LDTRLC
Trigger: ACATAATCGTGTGTCCAGGCAAACGCACACTAGTGT...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTA +
Preference number: 2 (lower is better)
Translates to: SPPPHRAPSEACTANPQQNNVEY*CAVPSL
Trigger: TAATGAAGGCACAGCACAGCAGTACTCCACATTGTT...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCGGAAAGTCCAATCCATaGAGTTTTAAGGATCTAAGA +
Preference number: 2 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFGKSNP*SFKDLR
Trigger: TCTTAGATCCTTAAAACTTCATGGATTGGACTTTCC...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CAA 90 bp CTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACTGAGTaGAGGTTCCTCTCCTGTCTGCCCGCAGGGAGGCAGCACTATCTG +
Preference number: 2 (lower is better)
Translates to: LSTPTSPIRAMKWTE*RFLSCLPAGRQHYL
Trigger: CAGATAGTGCTGCCTCCCTGCGGGCAGACAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGGAATGCTGGAGAGATaGGTATTCCAGCTACAGGCC +
Preference number: 2 (lower is better)
Translates to: EYCCAVPSLPETTAACILGMLER*VFQLQA
Trigger: GGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCGGAATGCTGGAGAGATaGGTATTCCAGCTACAGGCC +
Preference number: 2 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAGMLER*VFQLQA
Trigger: GGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCC...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR TCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 2 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR TCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGCTTTCAAAAGGCTGTTaGCTACCAGAGGCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRLSKGC*LPEAGL
Trigger: CAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAG...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLETTAA*ILHRAR
Trigger: CCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTC...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTACTGCTGCTGCTGTACTaGGCCAGCAGAGCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLLLLLY*ASRAEW
Trigger: CCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAG...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CAA 90 bp CCTCGATCTCTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTaGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATG +
Preference number: 2 (lower is better)
Translates to: PRSLWMACGGGIMGT*FTNTNLLLRYSLVM
Trigger: CATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR TCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTGGCAGCTATGCAGTGTaGTTCAACAATTCCAGTTGG +
Preference number: 2 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKIGSYAV*FNNSSW
Trigger: CCAACTGGAATTGTTGAATCACACTGCATAGCTGCC...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGTGTGGTGCCTGTGAGTaGTTCCTGTGGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVCGACE*FLWKGR
Trigger: CCTGCCTTTCCACAGGAAGCACTCACAGGCACCACA...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCAETTAA*ILHRAR
Trigger: CCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTC...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACCCAGTCTCACCAGCCTaGTTCTCACCCACTATCATC +
Preference number: 2 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDPVSPA*FSPTII
Trigger: GATGATAGTGGGTGAGAAGCAGGCTGGTGAGACTGG...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 2 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR TCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACTGTGCCTTCATTACCTaGGACTACAGCAGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDCAFIT*DYSSLH
Trigger: ATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACA...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp ACCTCGATCTCTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTTGTTCACAATTACAAACAGCACTaGACAACTAGTGACTCACTG +
Preference number: 2 (lower is better)
Translates to: TSISLDGMWWGNNGHLVHNYKQH*TTSDSL
Trigger: CAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATT...GTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTGGAATGCTGGAGAGATaGGTATTCCAGCTACAGGCC +
Preference number: 2 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVGMLER*VFQLQA
Trigger: GGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCC...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTCAGCCAGATCAAGGATaGTCTCACCCTGATACTAGA +
Preference number: 2 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPQPDQG*SHPDTR
Trigger: TCTAGTATCAGGGTGAGAGCATCCTTGATCTGGCTG...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAGGATGCCGGCACACATaGCTCTCTCTTCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLGCRHT*LSLLKR
Trigger: TCTCTTGAGAAGAGAGAGGCATGTGTGCCGGCATCC...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGAGGCAGGCTTGTTATaGAGTTGTTATGAACAAATA +
Preference number: 2 (lower is better)
Translates to: EYCCAVPSLPETTAACILEAGLL*SCYEQI
Trigger: TATTTGTTCATAACAACTTCATAACAAGCCTGCCTC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR GCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTAGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCC +
Preference number: 2 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLDPRTE*WRDAYS
Trigger: GGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR CCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTCCCAGGACGGAATGCTaGAGAGATGCGTATTCCAGC +
Preference number: 2 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCAPRTEC*RDAYSS
Trigger: GCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGG...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR CCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTTCAACAATTCCAGTTaGACGGAAAATACAGCTGTC +
Preference number: 2 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAFNNSS*TENTAV
Trigger: GACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAA...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR CCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCCATTCCATCATGTCCTaGGTCAAGCCCCTGGTTCTA +
Preference number: 2 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIHSIMS*VKPLVL
Trigger: TAGAACCAGGGGCTTGACCCAGGACATGATGGAATG...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTGGCAGCTATGCAGTGTaGTTCAACAATTCCAGTTGG +
Preference number: 2 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACGSYAV*FNNSSW
Trigger: CCAACTGGAATTGTTGAATCACACTGCATAGCTGCC...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR TCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGCGGTTGCCAAGACACTaGAAATTTGATGCTCATTCC +
Preference number: 2 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKRLPRH*KFDAHS
Trigger: GGAATGAGCATCAAATTTTCAGTGTCTTGGCAACCG...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTGTGGTGCCTGTGAGTaGTTCCTGTGGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCCGACE*FLWKGR
Trigger: CCTGCCTTTCCACAGGAAGCACTCACAGGCACCACA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAATGAACTTCCGTGTTTaGCACTTCATGTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLMNFRV*HFMSGH
Trigger: ATGCCCTGACATGAAGTGGCAAACACGGAAGTTCAT...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTACCCAGGACGGAATGCTaGAGAGATGCGTATTCCAGC +
Preference number: 2 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVPRTEC*RDAYSS
Trigger: GCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGG...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCC +
Preference number: 2 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVDPRTE*WRDAYS
Trigger: GGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTTCAACAATTCCAGTTaGACGGAAAATACAGCTGTC +
Preference number: 2 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGFNNSS*TENTAV
Trigger: GACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTTTCAACAATTCCAGTTaGACGGAAAATACAGCTGTC +
Preference number: 2 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPFNNSS*TENTAV
Trigger: GACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAA...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR CCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAAATAGAACCGCTAGGTaGAGCCAAGAGTTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLNRTAR*SQEFEG
Trigger: TCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATT...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGGAGGCAGGCTTGTTATaGAGTTGTTATGAACAAATA +
Preference number: 2 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGEAGLL*SCYEQI
Trigger: TATTTGTTCATAACAACTTCATAACAAGCCTGCCTC...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCTTTCAAAAGGCTGTTaGCTACCAGAGGCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCLSKGC*LPEAGL
Trigger: CAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGAATTCCTAGTGCAATaGAGGTTCTTTCGGTATATG +
Preference number: 2 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLEFLVQ*RFFRYM
Trigger: CATATACCGAAAGAACCTGCATTGCACTAGGAATTC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCATTCCATCATGTCCTaGGTCAAGCCCCTGGTTCTA +
Preference number: 2 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCHSIMS*VKPLVL
Trigger: TAGAACCAGGGGCTTGACCCAGGACATGATGGAATG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 2 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGGAGGCAGGCTTGTTATaGAGTTGTTATGAACAAATA +
Preference number: 2 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKEAGLL*SCYEQI
Trigger: TATTTGTTCATAACAACTTCATAACAAGCCTGCCTC...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCGAATTCCTAGTGCAATaGAGGTTCTTTCGGTATATG +
Preference number: 2 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIEFLVQ*RFFRYM
Trigger: CATATACCGAAAGAACCTGCATTGCACTAGGAATTC...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR TCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCTACCATCAACTTGCATaGCAAAGAGTCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILYHQLA*QRVPKP
Trigger: AGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTA...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
3UTR-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAACAAGACAAAAACTCTaGTTCTCGAGACTCTTACTT +
Preference number: 2 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLTRQKL*FSRLLL
Trigger: AAGTAAGAGTCTCGAGAAGCAGAGTTTTTGTCTTGT...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR GCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATGTATACCATCAACTTaGATGACAAAGAGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCECIPST*MTKSPK
Trigger: TTTGGGACTCTTTGTCATGCAAGTTGATGGTATACA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR TCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATATACCATCAACTTGCATaGCAAAGAGTCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIYHQLA*QRVPKP
Trigger: AGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTA...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
3UTR-3UTR CCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACAATAGAACCGCTAGGTaGAGCCAAGAGTTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNNRTAR*SQEFEG
Trigger: TCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATT...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATCCTTGTCCCTTTCATaGAAGAATTCAATTACAAAC +
Preference number: 2 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCESLSLS*KNSITN
Trigger: GTTTGTAATTGAATTCTTCCATGAAAGGGACAAGGA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR GCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCTGTATACCATCAACTTaGATGACAAAGAGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILCIPST*MTKSPK
Trigger: TTTGGGACTCTTTGTCATGCAAGTTGATGGTATACA...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
3UTR GCA 72 bp TCCTCTCCTGTCTGCCCGCAGGGAGGCAGCACTATCTaGTCCCCGCCACCCCACCGTGCTCCGTCCGAGGCG +
Preference number: 3 (lower is better)
Translates to: SSPVCPQGGSTI*SPPPHRAPSEA
Trigger: CGCCTCGGACGGAGCACGGTGGGGTGGCGGGGAGCAGATAGTGCTGCCTCCCTGCGGGCAGACAGGAGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp GGGGACTCCGCAGGAACACAGCTGTGCTGGGGCTGCTaGTGCTGTACTGCGCCAGCAGAGCTGAGTGGGACA +
Preference number: 3 (lower is better)
Translates to: GDSAGTQLCWGC*CCTAPAELSGT
Trigger: TGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp AAAGGGGACTCCGCAGGAACACAGCTGTGCTGGGGCTaGTGCTGCTGTACTGCGCCAGCAGAGCTGAGTGGG +
Preference number: 3 (lower is better)
Translates to: KGDSAGTQLCWG*CCCTAPAELSG
Trigger: CCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp CGGCTTTGTAAAGGGGACTCCGCAGGAACACAGCTGTaGTGGGGCTGCTGCTGCTGTACTGCGCCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: RLCKGDSAGTQL*WGCCCCTAPAE
Trigger: CTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGCGGAGTCCCCTTTACAAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCTTTAAAATAAGGATGTaGTCACCTCCTGAACTGGAT +
Preference number: 3 (lower is better)
Translates to: PSEACTANPQQCPRLPLLFKIRM*SPPELD
Trigger: ATCCAGTTCAGGAGGTGACAACATCCTTATTTTAAA...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp TGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGGAGGAGTGCAGATGCC +
Preference number: 3 (lower is better)
Translates to: CAVPSLPETTAA*ILHRARRSADA
Trigger: GGCATCTGCACTCCTCCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR GCA 72 bp GACCTGCCAGCCTCCCGTTTCACGCAGCCACTCTGCTaGTCTACAAAGTTTCACATCAGGGGTCAGCGGCTT +
Preference number: 3 (lower is better)
Translates to: DLPASRFTQPLC*STKFHIRGQRL
Trigger: AAGCCGCTGACCCCTGATGTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGTGAAACGGGAGGCTGGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp GCTGGGGCTGCTGCTGCTGTACTGCGCCAGCAGAGCTaGGTGGGACAGTATTTACCATCTCTGGTCCTTTAC +
Preference number: 3 (lower is better)
Translates to: AGAAAAVLRQQS*VGQYLPSLVLY
Trigger: GTAAAGGACCAGAGATGGTAAATACTGTCCCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp TGCCTCCAAGTGACAGGTAACACTGCAGAACCTATCTaGGGACCTGCCAGCCTCCCGTTTCACGCAGCCACT +
Preference number: 3 (lower is better)
Translates to: CLQVTGNTAEPI*GPASLPFHAAT
Trigger: AGTGGCTGCGTGAAACGGGAGGCTGGCAGGTCCTCAGATAGGTTCTGCAGTGTTACCTGTCACTTGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp CAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTaGGACTACAGCAGCCTGCATTCTCCACCGGGCTCG +
Preference number: 3 (lower is better)
Translates to: QCGVLLCCAFIT*DYSSLHSPPGS
Trigger: CGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR TCA 72 bp AACTCCCACTTCCCCTATCAGGGCTATGAAATGGACTaGGTTGAGGTTCCTCTCCTGTCTGCCCGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: NSHFPYQGYEMD*VEVPLLSARRE
Trigger: CTCCCTGCGGGCAGACAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp CACCCACAACAGCACCTCGTTCAGCTGCCACATGTGTaGATAAGGATGCAATGTCCAGAAGTGTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: HPQQHLVQLPHV*IRMQCPEVLAA
Trigger: GGCAGCCAACACTTCTGGACATTGCATCCTTATTCACACATGTGGCAGCTGAACGAGGTGCTGTTGTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CCA 72 bp CATATTCTAGCTGAAACGGATCCCAGGACGGAATGCTaGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: HILAETDPRTEC*RDAYSSYRPSE
Trigger: CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAGAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
3UTR-3UTR CAA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTATGAACTTCCGTGTTaGCCACTTCATGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQYELPC*PLHVRA
Trigger: TGCCCTGACATGAAGTGGCAAACACGGAAGTTCATA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp CAACATATTCTAGCTGAAACGGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCCAGCTACAGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: QHILAETDPRTE*WRDAYSSYRPS
Trigger: TGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
3UTR TCA 72 bp TGCTTCTCACCCACTATCATCTCCAACCTTTCTCTTTaGACCCATCAAGGATGCCGGCACACATGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: CFSPTIISNLSL*THQGCRHTCLS
Trigger: AGAGAGGCATGTGTGCCGGCATCCTTGATGGGTTCAAAGAGAAAGGTTGGAGATGATAGTGGGTGAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp ATTCCTGAGCTTTCCAGTCAGACACTAGTGTGCGTTTaGCTGGACACACGATTATGTTATAAGGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: IPELSSQTLVCV*LDTRLCYKEPR
Trigger: CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTGACTGGAAAGCTCAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACGCTTTCAAAAGGCTGTaGACTACCAGAGGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDAFKRL*TTRGRL
Trigger: AAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGC...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGGACACTAGTGTGCGTTaGCCTGGACACACGATTATG +
Preference number: 3 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKDTSVR*PGHTIM
Trigger: CATAATCGTGTGTCCAGGCAAACGCACACTAGTGTC...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGACACTAGTGTGCGTTaGCCTGGACACACGATTATG +
Preference number: 3 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLDTSVR*PGHTIM
Trigger: CATAATCGTGTGTCCAGGCAAACGCACACTAGTGTC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp ATAATGGACAAGCTCCTGAATCCAACATATTCTAGCTaGAACGGATCCCAGGACGGAATGCTGGAGAGATGC +
Preference number: 3 (lower is better)
Translates to: IMDKLLNPTYSS*NGSQDGMLERC
Trigger: GCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGGATTCAGGAGCTTGTCCATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR TCA 72 bp ACCCCAGGTCTCCAAGCAACCACATGGTCAAGGGCATaGATAATTAAAAGTTGGTGGGAACTCACAAAGACC +
Preference number: 3 (lower is better)
Translates to: TPGLQATTWSRA*IIKSWWELTKT
Trigger: GGTCTTTGTGAGTTCCCACCAACTTTTAATTATTCATGCCCTTGACCATGTGGTTGCTTGGAGACCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp TGTGTGAATAAGGATGCAATGTCCAGAAGTGTTGGCTaGCTCCAAGTGACAGGTAACACTGCAGAACCTATC +
Preference number: 3 (lower is better)
Translates to: CVNKDAMSRSVG*LQVTGNTAEPI
Trigger: GATAGGTTCTGCAGTGTTACCTGTCACTTGGAGGCAGCCAACACTTCTGGACATTGCATCCTTATTCACACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTACTCCAACCTTTCTCTTaGAACCCATCAAGGATGCCG +
Preference number: 3 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLLQPFS*NPSRMP
Trigger: CGGCATCCTTGATGGGTTCAAAGAGAAAGGTTGGAG...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp CATTTAATCTGTCGGGGCCAATTCAGCATTCAAGTATaGACTTCCGTGTTTGCCACTTCATGTCAGGGCATG +
Preference number: 3 (lower is better)
Translates to: HLICRGQFSIQV*TSVFATSCQGM
Trigger: CATGCCCTGACATGAAGTGGCAAACACGGAAGTTCATACTTGAATGCTGAATTGGCCCCGACAGATTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp GGGCCAATTCAGCATTCAAGTATGAACTTCCGTGTTTaGCACTTCATGTCAGGGCATGAGACAAAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: GPIQHSSMNFRV*HFMSGHETKFP
Trigger: AGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCAAACACGGAAGTTCATACTTGAATGCTGAATTGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CCA 72 bp CTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGTaGTGGGGGAATAATGGGCACCTTGTTCACAAACAC +
Preference number: 3 (lower is better)
Translates to: LILLTSISLDGM*WGNNGHLVHKH
Trigger: GTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR CAA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACACATCCAGAATTTCTTaGTACAGGCCCAAAGGGATG +
Preference number: 3 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDTSRIS*YRPKGM
Trigger: CATCCCTTTGGGCCTGTACAAAGAAATTCTGGATGT...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCATGAAATGGACTGAGTaGAGGTTCCTCTCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIMKWTE*RFLSCL
Trigger: CAGACAGGAGAGGAACCTCAACTCAGTCCATTTCAT...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR GCA 72 bp GAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTACCTGAGACTACAGCA +
Preference number: 3 (lower is better)
Translates to: EVYVQIGNNVEY*CAVPSLPETTA
Trigger: TGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR CCA 72 bp TTGACTTTCCTTCTGCAAAAATGTTTTGTGCAAACGTaGGTTCCAATCACTACAGCTCCCTGGGAAACAGTG +
Preference number: 3 (lower is better)
Translates to: LTFLLQKCFVQT*VPITTAPWETV
Trigger: CACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAAGGAAAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp TATGAACTTCCGTGTTTGCCACTTCATGTCAGGGCATaGGACAAAGTTTCCTCTGAGCTTGAAATTCAAGTG +
Preference number: 3 (lower is better)
Translates to: YELPCLPLHVRA*DKVSSELEIQV
Trigger: CACTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCAAACACGGAAGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CCA 72 bp ATTCTTTTAACCTCGATCTCTTTGGATGGCATGTGGTaGGGGAATAATGGGCACCTTGTTCACAAACACAAA +
Preference number: 3 (lower is better)
Translates to: ILLTSISLDGMW*GNNGHLVHKHK
Trigger: TTTGTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGTTAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR CAA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCATTCAACAATTCCAGTaGGACGGAAAATACAGCTGT +
Preference number: 3 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITIQQFQ*DGKYSC
Trigger: ACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAAT...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR-3UTR CAA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTGCTTTCAAAAGGCTGTaGACTACCAGAGGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCAFKRL*TTRGRL
Trigger: AAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGC...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATTCTGCAAAAATGTTTaGTGCAAACGTGGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLFCKNV*CKRGFQ
Trigger: TTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp TGTCCTATAATTAAGAACTGGCAAGAGCCCCACCAGTaGAACTCAGAAGCTGTTTTTAGCATAATGGCTAAG +
Preference number: 3 (lower is better)
Translates to: CPIIKNWQEPHQ*NSEAVFSIMAK
Trigger: CTTAGCCATTATGCTAAAAACAGCTTCTGAGTTTCACTGGTGGGGCTCTTGCCAGTTCTTAATTATAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR TCA 72 bp ATTTACCATCTCTGGTCCTTTACAGAACAAGACTGCTaGCTCCTCTCAATGACAAGACAAAAACTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: IYHLWSFTEQDC*LLSMTRQKLCF
Trigger: GAAGCAGAGTTTTTGTCTTGTCATTGAGAGGAGTCAGCAGTCTTGTTCTGTAAAGGACCAGAGATGGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCTTCTGCAAAAATGTTTaGTGCAAACGTGGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIFCKNV*CKRGFQ
Trigger: TTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTATATGAACTTCCGTGTTaGCCACTTCATGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVYELPC*PLHVRA
Trigger: TGCCCTGACATGAAGTGGCAAACACGGAAGTTCATA...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCTTTAAAATAAGGATGTaGTCACCTCCTGAACTGGAT +
Preference number: 3 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIFKIRM*SPPELD
Trigger: ATCCAGTTCAGGAGGTGACAACATCCTTATTTTAAA...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR-3UTR CAA 90 bp ACTGTGTTTTTAGTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGTGCTATATGGCTTCCTaGATTCCTTGTCCCTTTCAT +
Preference number: 3 (lower is better)
Translates to: TVFLVCLILLTSISLDGMCYMAS*IPCPFH
Trigger: ATGAAAGGGACAAGGAATCAAGGAAGCCATATAGCA...CATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACACTAAAAACACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR TCA 72 bp AGATACAGTCTGGTGATGTGTGAACATACTAAGGTCTaGAAACTCTTCCAAAACCACAATGGTATACACACT +
Preference number: 3 (lower is better)
Translates to: RYSLVMCEHTKV*KLFQNHNGIHT
Trigger: AGTGTGTATACCATTGTGGTTTTGGAAGAGTTTTCAGACCTTAGTATGTTCACACATCACCAGACTGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR CCA 72 bp GTTATACAGGATCAGATTATGAGACTGTTGCAAACCTaGGTAATCTGTCAGGTGTATGAGATGAAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: VIQDQIMRLLQT*VICQVYEMKEK
Trigger: TTTCTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATCCTGTATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR-3UTR CAA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAATTCAACAATTCCAGTaGGACGGAAAATACAGCTGT +
Preference number: 3 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVIQQFQ*DGKYSC
Trigger: ACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAAT...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CCA 72 bp AAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTaGGCAGCTATGCAGTGTGATTCAACAATTCCAGTT +
Preference number: 3 (lower is better)
Translates to: KSIESSRPNTLF*AAMQCDSTIPV
Trigger: AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
3UTR CCA 72 bp ATGCTATATGGCTTCCTTGATTCCTTGTCCCTTTCATaGAAGAATTCAATTACAAACAGCACTGAACAACTA +
Preference number: 3 (lower is better)
Translates to: MLYGFLDSLSLS*KNSITNSTEQL
Trigger: TAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGAAAGGGACAAGGAATCAAGGAAGCCATATAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
3UTR TCA 72 bp ACATTTGTCATTATCATTGATGCTATATGGCTTCCTTaGTTCCTTGTCCCTTTCATGGAAGAATTCAATTAC +
Preference number: 3 (lower is better)
Translates to: TFVIIIDAIWLP*FLVPFMEEFNY
Trigger: GTAATTGAATTCTTCCATGAAAGGGACAAGGAATCAAGGAAGCCATATAGCATCAATGATAATGACAAATGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SPPPHRAPSEACTANPQQETTAA*ILHRAR
Trigger: CCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTC...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCGGAACACAGCTGTGCTaGGGCTGCTGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PSEACTANPQQCPRLPLLGTQLC*GCCCCT
Trigger: AGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCC...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCAGCATCTACCAAGAATaGCGCTGGGGGAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFSIYQE*RWGRDQ
Trigger: CTGATCTCTCCCCCAGCGCCATTCTTGGTAGATGCT...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCGGCAGCTATGCAGTGTaGTTCAACAATTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFGSYAV*FNNSSW
Trigger: CCAACTGGAATTGTTGAATCACACTGCATAGCTGCC...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCCAGCCAGATCAAGGATaGTCTCACCCTGATACTAGA +
Preference number: 4 (lower is better)
Translates to: PSEACTANPQQCPRLPLLQPDQG*SHPDTR
Trigger: TCTAGTATCAGGGTGAGAGCATCCTTGATCTGGCTG...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAGCTCCGTCCGAGGCGTaGACGGCAAACCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQAPSEA*TANPQQ
Trigger: CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGC...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTTTTTTGTCACTGAGCTaGGGACGGCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSFLSLS*GRRSPG
Trigger: GCCGGGGCTGCGCCGTCCCCAGCTCAGTGACAAAAA...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR CCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCACACAGCACTGTTTGTaGCAGCATCCTGAACATTGG +
Preference number: 4 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFTQHCL*QHPEHW
Trigger: CCAATGTTCAGGATGCTGCCACAAACAGTGCTGTGT...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTCCTGTTCTTTGCCCTaGTCATCATCTTCTACAACC +
Preference number: 4 (lower is better)
Translates to: SPPPHRAPSEACTANPQQSCSLP*SSSSTT
Trigger: GGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGA...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCATTGGTTTCAGCCTGTaGTGGTGTTTGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: PSEACTANPQQCPRLPLLIGFSL*WCLTSV
Trigger: TACAGAGGTCAAACACCAGCACAGGCTGAAACCAAT...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGACACTAGTGTGCGTTTaGCTGGACACACGATTATGT +
Preference number: 4 (lower is better)
Translates to: SPPPHRAPSEACTANPQQTLVCV*LDTRLC
Trigger: ACATAATCGTGTGTCCAGGCAAACGCACACTAGTGT...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAACAGCATTTTTGTCACTaGGCTGGGGACGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQQHFCH*AGDGAA
Trigger: GGCTGCGCCGTCCCCAGCTCAGTGACAAAAATGCTG...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR GCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACGGAGGCAGCACTATCTaGTCCCCGCCACCCCACCGT +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYGGSTI*SPPPHR
Trigger: ACGGTGGGGTGGCGGGGAGCAGATAGTGCTGCCTCC...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCTATGTTCCTGTTCTTTaGCCTGATCATCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: PSEACTANPQQCPRLPLLYVPVL*PDHHLL
Trigger: TAGAAGATGATGATCAGGGCAAAGAACAGGAACATA...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTGGAATGCTGGAGAGATaGGTATTCCAGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSGMLER*VFQLQA
Trigger: GGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCC...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTGGATGCCGGCACACATaGCTCTCTCTTCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSGCRHT*LSLLKR
Trigger: TCTCTTGAGAAGAGAGAGGCATGTGTGCCGGCATCC...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCATGTTTGCATGCTTTTaGATGATCCAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFMFACF*MIQSKD
Trigger: GTCTTTAGACTGGATCATCCAAAAGCATGCAAACAT...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
3UTR CAA 72 bp CCCACTTCCCCTATCAGGGCTATGAAATGGACTGAGTaGAGGTTCCTCTCCTGTCTGCCCGCAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTSPIRAMKWTE*RFLSCLPAGRQ
Trigger: CTGCCTCCCTGCGGGCAGACAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCCCTGATAGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACGTAGACGCCGAGAAATaGCGCCCACAACGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYVDAEK*RPQRAH
Trigger: GTGGGCTCGTTGTGGGCGCCATTTCTCGGCGTCTAC...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR CCA 90 bp GATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGCCCAGGACGGAATGCTaGAGAGATGCGTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: DPRTECWRDAYSSYRPSEPRTEC*RDAYSS
Trigger: GCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGG...CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR TCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCAGCATTTTTGTCACTaGGCTGGGGACGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGQHFCH*AGDGAA
Trigger: GGCTGCGCCGTCCCCAGCTCAGTGACAAAAATGCTG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR TCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAGCCTGTGCTGGTGTTTaGCCTCTGTATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQACAGV*PLYSFH
Trigger: ATGGAAGGAATACAGAGGTCAAACACCAGCACAGGC...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACCGTGTGTGGTGCCTGTaGGTGCTTCCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYRVWCL*VLPVER
Trigger: CCTTTCCACAGGAAGCACTCACAGGCACCACACACG...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGAGGAGTGCAGATGCCTaGGGTAAATGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQRSADA*GKCPRV
Trigger: GACCCTGGGGCATTTACCTCAGGCATCTGCACTCCT...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCAAGAGCCCCACCAGTaGAACTCAGAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSQEPHQ*NSEAVF
Trigger: AAAAACAGCTTCTGAGTTTCACTGGTGGGGCTCTTG...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCTGCTGCTGCTGTACTaGGCCAGCAGAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGLLLLY*ASRAEW
Trigger: CCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCCTGTGCTGGGGCTGCTaGTGCTGTACTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAALCWGC*CCTAPA
Trigger: TGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAG...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGACCTATCTGAGGACCTaGCAGCCTCCCGTTTCACGC +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQTYLRT*QPPVSR
Trigger: GCGTGAAACGGGAGGCTGGCAGGTCCTCAGATAGGT...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCACGAATCTGAACTCTaGGACAAGTTCAGGACTATG +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSHESEL*DKFRTM
Trigger: CATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTG...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTTGGGGGAGAGATCAGTaGGATTCCATCTTTATTACC +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSWGRDQ*DSIFIT
Trigger: GGTAATAAAGATGGAATCTCACTGATCTCTCCCCCA...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCGTGTGTGGTGCCTGTaGGTGCTTCCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGRVWCL*VLPVER
Trigger: CCTTTCCACAGGAAGCACTCACAGGCACCACACACG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCAGGAGTGCAGATGCCTaGGGTAAATGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILRSADA*GKCPRV
Trigger: GACCCTGGGGCATTTACCTCAGGCATCTGCACTCCT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAAGCTGCCAATTGCACTaGTGTATCAAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQSCQLH*CIKGTV
Trigger: GACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCT...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAETTAA*ILHRAR
Trigger: CCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTC...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTGCTCCGTCCGAGGCGTaGACGGCAAACCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPAPSEA*TANPQQ
Trigger: CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGC...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAATTCACGCAGCCACTCTaGTGCTCTACAAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQFTQPL*CSTKFH
Trigger: GTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGTGAA...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTTGCACTGCTTCTACTTaGGCCTTCAAAATGTTACTC +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSCTAST*AFKMLL
Trigger: GAGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCA...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp GATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGGGCAGCTATGCAGTGTaGTTCAACAATTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: DPRTECWRDAYSSYRPSEGSYAV*FNNSSW
Trigger: CCAACTGGAATTGTTGAATCACACTGCATAGCTGCC...CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR GCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCC +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYDPRTE*WRDAYS
Trigger: GGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTCCCGCCACCCCACCGTaGTCCGTCCGAGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCAPATPP*SVRGVH
Trigger: GTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGG...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGGAGGCAGCACTATCTaGTCCCCGCCACCCCACCGT +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLGGSTI*SPPPHR
Trigger: ACGGTGGGGTGGCGGGGAGCAGATAGTGCTGCCTCC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTGGTTCCTCTCCTGTCTaGCCGCAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPGSSPV*PQGGST
Trigger: AGTGCTGCCTCCCTGCGGGCAGACAGGAGAGGAACC...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTGCAGGAACACAGCTGTaGTGGGGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKIAGTQL*WGCCCC
Trigger: ACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGC...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAGAAACTCGGCGGCCCTaGCTCATTGGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IMYTINLHDKESQSLRGSETRRP*LIGRRR
Trigger: GCGGCGGCGGCCAATGAGGCAGGGCCGCCGAGTTTC...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTTTCACCACTTCCTCCTaGCTGTTTATGTTAACATCG +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSFTTSS*LFMLTS
Trigger: CGATGTTAACATAAACAGCCAGGAGGAAGTGGTGAA...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAATCTCAAGAGACTCTTTaGGGAGGGGCACATTATTCT +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQSQETL*GGAHYS
Trigger: AGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGA...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCGGAACACAGCTGTGCTaGGGCTGCTGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAGTQLC*GCCCCT
Trigger: AGTACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCC...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp GATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGTCCTGTTCTTTGCCCTaGTCATCATCTTCTACAACC +
Preference number: 4 (lower is better)
Translates to: DPRTECWRDAYSSYRPSESCSLP*SSSSTT
Trigger: GGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGA...CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTTCTAGAGCAGGTAACTaGAACCTTCACGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSSRAGN*NLHVLF
Trigger: AAATAAGACGTGAAGGTTTCAGTTACCTGCTCTAGA...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAATCCATAGGATATCTGTaGTTGTACAAAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQSIGYL*LYKGKG
Trigger: GCCTTTGCCTTTGTACAATCACAGATATCCTATGGA...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAACTAGCCTTGACCACATaGATATCAACCCCATACATT +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQLALTT*ISTPYI
Trigger: AATGTATGGGGTTGATATGCATGTGGTCAAGGCTAG...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCCCGCCACCCCACCGTaGTCCGTCCGAGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCPATPP*SVRGVH
Trigger: GTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACGGTTCCTCTCCTGTCTaGCCGCAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDGSSPV*PQGGST
Trigger: AGTGCTGCCTCCCTGCGGGCAGACAGGAGAGGAACC...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGCTGCTGCTGCTGTACTaGGCCAGCAGAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGLLLLY*ASRAEW
Trigger: CCACTCAGCTCTGCTGGCGCAGTACAGCAGCAGCAG...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTACTGTGCTGGGGCTGCTaGTGCTGTACTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLLCWGC*CCTAPA
Trigger: TGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCACAG...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGTGTCTTCTTCAGTCTaGAGAAGACCCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILVSSSV*RRPQVS
Trigger: GGAGACCTGGGGTCTTCTGCAGACTGAAGAAGACAC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAAGCGGGATTAATGCCCTaGCGGCCCGACGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCEAGLMP*RPDERG
Trigger: CCCTCTCTCGTCGGGCCGGCAGGGCATTAATCCCGC...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTGTAGACGCCGAGAAATaGCGCCCACAACGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPVDAEK*RPQRAH
Trigger: GTGGGCTCGTTGTGGGCGCCATTTCTCGGCGTCTAC...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR CCA 90 bp ACCTCGATCTCTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTTGTTCACATCCCCCAAGCCTGTTaGGAGCCATTACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSISLDGMWWGNNGHLVHIPQAC*EPLLWV
Trigger: GACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGAT...GTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCATCCCCCAAGCCTGTTaGGAGCCATTACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILIPQAC*EPLLWV
Trigger: GACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGAT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACCATTCCATCATGTCCTaGGTCAAGCCCCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYHSIMS*VKPLVL
Trigger: TAGAACCAGGGGCTTGACCCAGGACATGATGGAATG...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTGAGGCAGGCTTGTTATaGAGTTGTTATGAACAAATA +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSEAGLL*SCYEQI
Trigger: TATTTGTTCATAACAACTTCATAACAAGCCTGCCTC...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAGGAGTGCAGATGCCTaGGGTAAATGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGRSADA*GKCPRV
Trigger: GACCCTGGGGCATTTACCTCAGGCATCTGCACTCCT...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGGCTATGAAATGGACTaGGTTGAGGTTCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILGYEMD*VEVPLL
Trigger: CAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAACATGGTCAAGGGCATaGATAATTAAAAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQTWSRA*IIKSWW
Trigger: CCACCAACTTTTAATTATTCATGCCCTTGACCATGT...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGCTGCCAATTGCACTaGTGTATCAAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYSCQLH*CIKGTV
Trigger: GACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCT...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGAGACTACAGCAGCCTaGATTCTCCACCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLETTAA*ILHRAR
Trigger: CCGAGCCCGGTGGAGAATGCAGGCTGCTGTAGTCTC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTACAAGACAAAAACTCTaGTTCTCGAGACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSTRQKL*FSRLLL
Trigger: AAGTAAGAGTCTCGAGAAGCAGAGTTTTTGTCTTGT...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTTGCTGGGGCTGCTGCTaGTGTACTGCGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVCWGCC*CTAPAE
Trigger: CTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCA...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGGCAGGAACACAGCTGTaGTGGGGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKAGTQL*WGCCCC
Trigger: ACAGCAGCAGCAGCCCCAGCACAGCTGTGTTCCTGC...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCTTTTTGTCACTGAGCTaGGGACGGCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIFLSLS*GRRSPG
Trigger: GCCGGGGCTGCGCCGTCCCCAGCTCAGTGACAAAAA...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263713.10
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACACAGCATTTTTGTCACTaGGCTGGGGACGGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTQHFCH*AGDGAA
Trigger: GGCTGCGCCGTCCCCAGCTCAGTGACAAAAATGCTG...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331393.8
CDS-3UTR TCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQSISSV*IGTNLN
Trigger: GTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTCCTGTTCTTTGCCCTaGTCATCATCTTCTACAACC +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQSCSLP*SSSSTT
Trigger: GGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACATAAATCCTGATCGATaGGAACTCTTTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYINPDR*ELFWTG
Trigger: CCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTAT...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGTGTGCCTTCATTACCTaGGACTACAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRCAFIT*DYSSLH
Trigger: ATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACA...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACTCTCAAGCAATGTGGTaGCATAGGGACTTACAGATC +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYSQAMW*HRDLQI
Trigger: GATCTGTAAGTCCCTATGTCACCACATTGCTTGAGA...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTATGCTGGGGCTGCTGCTaGTGTACTGCGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLCWGCC*CTAPAE
Trigger: CTCTGCTGGCGCAGTACAGCAGCAGCAGCCCCAGCA...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp GATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGCTTTATTCAGATAATTaGTTTCAGCCTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DPRTECWRDAYSSYRPSELYSDN*FQPVLV
Trigger: CACCAGCACAGGCTGAAACCAATTATCTGAATAAAG...CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR CCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCACACAGCACTGTTTGTaGCAGCATCCTGAACATTGG +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILTQHCL*QHPEHW
Trigger: CCAATGTTCAGGATGCTGCCACAAACAGTGCTGTGT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCAAATGGGACCAGAGCTaGTCACAGCATCTACCAAGA +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILKWDQS*SQHLPR
Trigger: TCTTGGTAGATGCTGTGACCAGCTCTGGTCCCATTT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGGCCCTCAGAGCTCAGTaGTCAGTAAACACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRALRAQ*SVNTSA
Trigger: AGCAGAAGTGTTTACTGACCACTGAGCTCTGAGGGC...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTTTCCAACTTTCTTCTaGCCACTGAAGAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQFPTFF*PLKRYS
Trigger: ACTGTACCTCTTCAGTGGTCAGAAGAAAGTTGGAAA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCTCTCAAGCAATGTGGTaGCATAGGGACTTACAGATC +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILSQAMW*HRDLQI
Trigger: GATCTGTAAGTCCCTATGTCACCACATTGCTTGAGA...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACATGGTTTCCACCACGTTaGCAGCAGTCGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTWFPPR*QQSLAA
Trigger: TGCTGCCAGCGACTGCTGTCAACGTGGTGGAAACCA...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp GATCAGATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGTGGTTTCCACCACGTTaGCAGCAGTCGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DQIMRLLQTWVICQVYEMWFPPR*QQSLAA
Trigger: TGCTGCCAGCGACTGCTGTCAACGTGGTGGAAACCA...CATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGATTGGTTTCAGCCTGTaGTGGTGTTTGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGIGFSL*WCLTSV
Trigger: TACAGAGGTCAAACACCAGCACAGGCTGAAACCAAT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACCTAGCCTTGACCACATaGATATCAACCCCATACATT +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYLALTT*ISTPYI
Trigger: AATGTATGGGGTTGATATGCATGTGGTCAAGGCTAG...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp GATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGTATGTTCCTGTTCTTTaGCCTGATCATCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: DPRTECWRDAYSSYRPSEYVPVL*PDHHLL
Trigger: TAGAAGATGATGATCAGGGCAAAGAACAGGAACATA...CTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR GCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCATGCATTTCCTGTCATaGTGGTCTGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAMHFLS*WSVPGL
Trigger: GAGTCCTGGAACAGACCAGCATGACAGGAAATGCAT...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCCAGCCAGATCAAGGATaGTCTCACCCTGATACTAGA +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAQPDQG*SHPDTR
Trigger: TCTAGTATCAGGGTGAGAGCATCCTTGATCTGGCTG...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACTGTGGTGCCTGTGAGTaGTTCCTGTGGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDCGACE*FLWKGR
Trigger: CCTGCCTTTCCACAGGAAGCACTCACAGGCACCACA...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGACACTAGTGTGCGTTTaGCTGGACACACGATTATGT +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGTLVCV*LDTRLC
Trigger: ACATAATCGTGTGTCCAGGCAAACGCACACTAGTGT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGACTCCCCTTCCCTACCTaGCACATTCGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRLPFPT*HIRRPP
Trigger: AGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAG...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGATCCCCCAAGCCTGTTaGGAGCCATTACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGIPQAC*EPLLWV
Trigger: GACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGAT...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILILYLH*HRSRGN
Trigger: ATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAAT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAAAGAGATGTGCGGTCTGGGGTaGGGGCAAGGCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: IMRLLQTWVICQVYEMKEMCGLG*GQGPCV
Trigger: AACACAAGGGCCTTGCCCCCACCCCAGACCGCACAT...CTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCCAATCCACCGGGGTGTaGTCATGGATGTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITQSTGV*SWMWKT
Trigger: TGTCTTCCACATCCATGATCACACCCCGGTGGATTG...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTGTGCCTTCATTACCTaGGACTACAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGCAFIT*DYSSLH
Trigger: ATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACTGTAACCTTATGCACTaGTTCTACTTGAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYCNLMH*FYLSLQ
Trigger: TTGAAGGCTCAAGTAGAAGCAGTGCATAAGGTTACA...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCC +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKDPRTE*WRDAYS
Trigger: GGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTA +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGNNVEY*CAVPSL
Trigger: TAATGAAGGCACAGCACAGCAGTACTCCACATTGTT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTCTCCCCTTCCCTACCTaGCACATTCGTAGACCACCT +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACLPFPT*HIRRPP
Trigger: AGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAG...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGGGATGCCGGCACACATaGCTCTCTCTTCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKGCRHT*LSLLKR
Trigger: TCTCTTGAGAAGAGAGAGGCATGTGTGCCGGCATCC...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTACGCAGCCACTCTGCTaGTCTACAAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKITQPLC*STKFHI
Trigger: GATGTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGT...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTTCCAGAAGTGTTGGCTaGCTCCAAGTGACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPSRSVG*LQVTGN
Trigger: GTTACCTGTCACTTGGAGGCAGCCAACACTTCTGGA...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGTGTCTTCTTCAGTCTaGAGAAGACCCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLVSSSV*RRPQVS
Trigger: GGAGACCTGGGGTCTTCTGCAGACTGAAGAAGACAC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACCTTTATTCAGATAATTaGTTTCAGCCTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYLYSDN*FQPVLV
Trigger: CACCAGCACAGGCTGAAACCAATTATCTGAATAAAG...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACAGCATCTACCAAGAATaGCGCTGGGGGAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDSIYQE*RWGRDQ
Trigger: CTGATCTCTCCCCCAGCGCCATTCTTGGTAGATGCT...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTCATCCTTCTTCCCCATaGCAACCGAGGTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPHPSSP*QPRFTL
Trigger: CAAGGTAAACCTCGGTTGCCATGGGGAAGAAGGATG...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGTGTTTTGTGCAAACGTaGGTTCCAATCACTACAGCT +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGCFVQT*VPITTA
Trigger: AGCTGTAGTGATTGGAACCCACGTTTGCACAAAACA...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTTTCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTTTTTGTCTCTCCCGCTaGACGGCAGCCCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: LSWKNSITNSTEQLVTHCFCLSR*TAAQRT
Trigger: GGTCCGCTGGGCTGCCGTCCAGCGGGAGAGACAAAA...ACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTACAGGAGGAACTCTCATaGCATTCAATCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLQEELS*HSILGS
Trigger: AGAGCCCAGGATTGAATGTCATGAGAGTTCCTCCTG...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTGGCAGCTATGCAGTGTaGTTCAACAATTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPGSYAV*FNNSSW
Trigger: CCAACTGGAATTGTTGAATCACACTGCATAGCTGCC...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGCTTTCAAAAGGCTGTTaGCTACCAGAGGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKLSKGC*LPEAGL
Trigger: CAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAG...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCCTTTCAAAAGGCTGTTaGCTACCAGAGGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITLSKGC*LPEAGL
Trigger: CAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAG...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGATGTGCCTTCATTACCTaGGACTACAGCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRCAFIT*DYSSLH
Trigger: ATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACA...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGTTGGCTGCCTCCAAGTaGCAGGTAACACTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVLAASK*QVTLQN
Trigger: GTTCTGCAGTGTTACCTGTCACTTGGAGGCAGCCAA...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGACATGGTCAAGGGCATaGATAATTAAAAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGTWSRA*IIKSWW
Trigger: CCACCAACTTTTAATTATTCATGCCCTTGACCATGT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTATGTTCCTGTTCTTTaGCCTGATCATCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQYVPVL*PDHHLL
Trigger: TAGAAGATGATGATCAGGGCAAAGAACAGGAACATA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTGGAATGCTGGAGAGATaGGTATTCCAGCTACAGGCC +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACGMLER*VFQLQA
Trigger: GGCCTGTAGCTGGAATACGCATCTCTCCAGCATTCC...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTA +
Preference number: 4 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRNNVEY*CAVPSL
Trigger: TAATGAAGGCACAGCACAGCAGTACTCCACATTGTT...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGAGTCAGACACTAGTGTaGGTTTGCCTGGACACACGA +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKSQTLV*VCLDTR
Trigger: TCGTGTGTCCAGGCAAACGCACACTAGTGTCTGACT...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCAGTCTCACCAGCCTaGTTCTCACCCACTATCATC +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVPVSPA*FSPTII
Trigger: GATGATAGTGGGTGAGAAGCAGGCTGGTGAGACTGG...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTCAGGACAGCTTCTTCTaGCAAAATGGGACCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACQDSFF*QNGTRA
Trigger: CGCTCTGGTCCCATTTTGGCAGAAGAAGCTGTCCTG...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS-3UTR CCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAATTTTTGTCACTGAGCTaGGGACGGCGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQFLSLS*GRRSPG
Trigger: GCCGGGGCTGCGCCGTCCCCAGCTCAGTGACAAAAA...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331393.8
CDS-3UTR CCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGGFSLC*CLTSVF
Trigger: GAATACAGAGGTCAAACACCAGCACAGGCTGAAACC...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCTTTATTCAGATAATTaGTTTCAGCCTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGLYSDN*FQPVLV
Trigger: CACCAGCACAGGCTGAAACCAATTATCTGAATAAAG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACATGTTTGCATGCTTTTaGATGATCCAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LAETDPRTECWRDAYSSYMFACF*MIQSKD
Trigger: GTCTTTAGACTGGATCATCCAAAAGCATGCAAACAT...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCATCCCCCAAGCCTGTTaGGAGCCATTACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIIPQAC*EPLLWV
Trigger: GACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGAT...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACGCCCTCAGAGCTCAGTaGTCAGTAAACACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDALRAQ*SVNTSA
Trigger: AGCAGAAGTGTTTACTGACCACTGAGCTCTGAGGGC...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCGCCCTCAGAGCTCAGTaGTCAGTAAACACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITALRAQ*SVNTSA
Trigger: AGCAGAAGTGTTTACTGACCACTGAGCTCTGAGGGC...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACCCAGGACGGAATGCTaGAGAGATGCGTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLPRTEC*RDAYSS
Trigger: GCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCAATGTCCAGAAGTGTTaGCTGCCTCCAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITNVQKC*LPPSDR
Trigger: CCTGTCACTTGGAGGCAGCCAACACTTCTGGACATT...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAAATGTCCAGAAGTGTTaGCTGCCTCCAAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRNVQKC*LPPSDR
Trigger: CCTGTCACTTGGAGGCAGCCAACACTTCTGGACATT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAGTTGACAGCAGTCGCTaGCAGCAGAGAGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: IMYTINLHDKESQSLRGSVDSSR*QQRAIS
Trigger: GGAAATGGCTCTCTGCTGCCAGCGACTGCTGTCAAC...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
3UTR CAA 72 bp CTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTaGTTCACAAACACAAACCTTCTCCTGAGATACAGT +
Preference number: 4 (lower is better)
Translates to: LWMACGGGIMGT*FTNTNLLLRYS
Trigger: ACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAAGCCTGTGCTGGTGTTTaGCCTCTGTATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCEACAGV*PLYSFH
Trigger: ATGGAAGGAATACAGAGGTCAAACACCAGCACAGGC...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp ACCTCGATCTCTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTTGTTCACTTGCATGCTTTTGGATaGTCCAGTCTAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: TSISLDGMWWGNNGHLVHLHAFG*SSLKTN
Trigger: ATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAA...GTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTCAAAATGTTACTCTTaGAGTCAGGAGGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAASKCYS*SQEELS
Trigger: TGAGAGTTCCTCCTGACTTCAAGAGTAACATTTTGA...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACAATCCACCGGGGTGTaGTCATGGATGTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLQSTGV*SWMWKT
Trigger: TGTCTTCCACATCCATGATCACACCCCGGTGGATTG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGCGTGTGTGGTGCCTGTaGGTGCTTCCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQRVWCL*VLPVER
Trigger: CCTTTCCACAGGAAGCACTCACAGGCACCACACACG...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGGAAAGTCCAATCCATaGAGTTTTAAGGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: EYCCAVPSLPETTAACILGKSNP*SFKDLR
Trigger: TCTTAGATCCTTAAAACTTCATGGATTGGACTTTCC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGCGGTTGCCAAGACACTaGAAATTTGATGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGRLPRH*KFDAHS
Trigger: GGAATGAGCATCAAATTTTCAGTGTCTTGGCAACCG...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTTTCAGCATTCAAGTATaGACTTCCGTGTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKIFSIQV*TSVFAT
Trigger: AGTGGCAAACACGGAAGTTCATACTTGAATGCTGAA...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTTCCATAGGATATCTGTaGTTGTACAAAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKISIGYL*LYKGKG
Trigger: GCCTTTGCCTTTGTACAATCACAGATATCCTATGGA...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGGCTGACTCCTCTCAATaGCAAGACAAAAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGADSSQ*QDKNSA
Trigger: AGCAGAGTTTTTGTCTTGTCATTGAGAGGAGTCAGC...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCATGCATTTCCTGTCATaGTGGTCTGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITMHFLS*WSVPGL
Trigger: GAGTCCTGGAACAGACCAGCATGACAGGAAATGCAT...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGATTAACGTCATTCAGTaGTTGGGATGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGINVIQ*LGCFHS
Trigger: ACTATGGAAACATCCCAAGCACTGAATGACGTTAAT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGGAATTCCTAGTGCAATaGAGGTTCTTTCGGTATATG +
Preference number: 4 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPREFLVQ*RFFRYM
Trigger: CATATACCGAAAGAACCTGCATTGCACTAGGAATTC...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAACGCAGCCACTCTGCTaGTCTACAAAGTTTCACATC +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRTQPLC*STKFHI
Trigger: GATGTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATTCACGCAGCCACTCTaGTGCTCTACAAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLFTQPL*CSTKFH
Trigger: GTGAAACTTTGTAGAGCAGCAGAGTGGCTGCGTGAA...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGGTACAAACAACTCAGTaGAGTGTTTCTAATACAAGT +
Preference number: 4 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQVQTTQ*SVSNTS
Trigger: ACTTGTATTAGAAACACTGCACTGAGTTGTTTGTAC...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRGFSLC*CLTSVF
Trigger: GAATACAGAGGTCAAACACCAGCACAGGCTGAAACC...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAATCCCCCAAGCCTGTTaGGAGCCATTACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: IMYTINLHDKESQSLRGSIPQAC*EPLLWV
Trigger: GACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGAT...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGACACAGCACTGTTTGTaGCAGCATCCTGAACATTGG +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKTQHCL*QHPEHW
Trigger: CCAATGTTCAGGATGCTGCCACAAACAGTGCTGTGT...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGAGGAAATCTTCATTTTaGGGCTTAGCTAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGRKSSF*GLAKRR
Trigger: TCTTCTCTTAGCTAAGCCCCAAAATGAAGATTTCCT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATAATGTGCGGTCTGGGGTaGGGGCAAGGCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIMCGLG*GQGPCV
Trigger: AACACAAGGGCCTTGCCCCCACCCCAGACCGCACAT...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATTGGATGGCATGTGGTaGGGGAATAATGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCELDGMW*GNNGHL
Trigger: AAGGTGCCCATTATTCCCCCACCACATGCCATCCAA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATCTTTGGATGGCATGTaGTGGGGGAATAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCESLDGM*WGNNGH
Trigger: GTGCCCATTATTCCCCCACCACATGCCATCCAAAGA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAGCCTGTGCTGGTGTTTaGCCTCTGTATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: IMYTINLHDKESQSLRGSACAGV*PLYSFH
Trigger: ATGGAAGGAATACAGAGGTCAAACACCAGCACAGGC...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCATCTCAAGCTGTTTaGGCTTCTCTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVPSQAV*ASLRCL
Trigger: AAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGG...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCCCATCTCAAGCTGTTTaGGCTTCTCTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIPSQAV*ASLRCL
Trigger: AAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGG...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACAGGAGGAACTCTCATaGCATTCAATCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLQEELS*HSILGS
Trigger: AGAGCCCAGGATTGAATGTCATGAGAGTTCCTCCTG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTCTTCATGTCAGGGCATaGGACAAAGTTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACLHVRA*DKVSSE
Trigger: CTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAG...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGCTGACTCCTCTCAATaGCAAGACAAAAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLADSSQ*QDKNSA
Trigger: AGCAGAGTTTTTGTCTTGTCATTGAGAGGAGTCAGC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp GATCAGATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAGCTGCCAATTGCACTaGTGTATCAAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: DQIMRLLQTWVICQVYEMSCQLH*CIKGTV
Trigger: GACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCT...CATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGGTGCCTGTGAGTaGTTCCTGTGGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQCGACE*FLWKGR
Trigger: CCTGCCTTTCCACAGGAAGCACTCACAGGCACCACA...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCCATGACATTCAATCCTaGGCTCTCAATGACATTATT +
Preference number: 4 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAHDIQS*ALNDII
Trigger: AATAATGTCATTGAGAGCCCAGGATTGAATGTCATG...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACTTCTTCTGCCAAAATaGGACCAGAGCTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLLLLPK*DQSWSQ
Trigger: CTGTGACCAGCTCTGGTCCCATTTTGGCAGAAGAAG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTTTCAACAATTCCAGTTaGACGGAAAATACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKIFNNSS*TENTAV
Trigger: GACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAA...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAAATAGAACCGCTAGGTaGAGCCAAGAGTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRNRTAR*SQEFEG
Trigger: TCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGTCACCTCCTGAACTaGATGGGAGATTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITCHLLN*MGDLGL
Trigger: AAGACCTAAATCTCCCATCCAGTTCAGGAGGTGACA...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCGTTGACAGCAGTCGCTaGCAGCAGAGAGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILVDSSR*QQRAIS
Trigger: GGAAATGGCTCTCTGCTGCCAGCGACTGCTGTCAAC...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATATTTCTATGTGCGGTCTaGGGTGGGGGCAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIFLCAV*GGGKAL
Trigger: AAGGGCCTTGCCCCCACCCCAGACCGCACATAGAAA...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAATTTCTATGTGCGGTCTaGGGTGGGGGCAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQFLCAV*GGGKAL
Trigger: AAGGGCCTTGCCCCCACCCCAGACCGCACATAGAAA...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp GATCAGATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: DQIMRLLQTWVICQVYEMSISSV*IGTNLN
Trigger: GTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGA...CATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATCCTGTTCTTTGCCCTaGTCATCATCTTCTACAACC +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCESCSLP*SSSSTT
Trigger: GGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTTTGCATGCTTTTGGATaGTCCAGTCTAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKILHAFG*SSLKTN
Trigger: ATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAA...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTATAAATCCTGATCGATaGGAACTCTTTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACINPDR*ELFWTG
Trigger: CCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTAT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAATAAATCCTGATCGATaGGAACTCTTTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTINPDR*ELFWTG
Trigger: CCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTAT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp TTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAAACAGTGCAAGATTGTCGAAACATTATTGTaGACACTAAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LCKRGFQSLQLPGKQCKIVETLL*TLSSSG
Trigger: ACCTGAAGAACTTAGTGTTCACAATAATGTTTCGAC...AATCTTGCACTGTTTCCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTCAAAATGTTACTCTTaGAGTCAGGAGGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGSKCYS*SQEELS
Trigger: TGAGAGTTCCTCCTGACTTCAAGAGTAACATTTTGA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGCACTGCTTCTACTTaGGCCTTCAAAATGTTACTC +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITCTAST*AFKMLL
Trigger: GAGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCA...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCAATCCACCGGGGTGTaGTCATGGATGTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCQSTGV*SWMWKT
Trigger: TGTCTTCCACATCCATGATCACACCCCGGTGGATTG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTGGGGGAGAGATCAGTaGGATTCCATCTTTATTACC +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACWGRDQ*DSIFIT
Trigger: GGTAATAAAGATGGAATCTCACTGATCTCTCCCCCA...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTTGGCTGCCTCCAAGTaGCAGGTAACACTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCLAASK*QVTLQN
Trigger: GTTCTGCAGTGTTACCTGTCACTTGGAGGCAGCCAA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTCTTTCTTCTGACCACTaGAGAGGTACAGTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPLSSDH*RGTVFK
Trigger: TTTAAACACTGTACCTCTTCAGTGGTCAGAAGAAAG...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATACCATCAACTTGCATaGCAAAGAGTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCEYHQLA*QRVPKP
Trigger: AGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAATTGGTTTCAGCCTGTaGTGGTGTTTGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTIGFSL*WCLTSV
Trigger: TACAGAGGTCAAACACCAGCACAGGCTGAAACCAAT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGATTGGTTTCAGCCTGTaGTGGTGTTTGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVIGFSL*WCLTSV
Trigger: TACAGAGGTCAAACACCAGCACAGGCTGAAACCAAT...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTGTAACCTTATGCACTaGTTCTACTTGAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGCNLMH*FYLSLQ
Trigger: TTGAAGGCTCAAGTAGAAGCAGTGCATAAGGTTACA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTGATCCCAGGACGGAATaGTGGAGAGATGCGTATTCC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCDPRTE*WRDAYS
Trigger: GGAATACGCATCTCTCCAGCATTCCGTCCTGGGATC...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACAGCCAGATCAAGGATaGTCTCACCCTGATACTAGA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLQPDQG*SHPDTR
Trigger: TCTAGTATCAGGGTGAGAGCATCCTTGATCTGGCTG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAAGTACTGCTGTGCTGTaGCTTCATTACCTGAGACTA +
Preference number: 4 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLSTAVL*LHYLRL
Trigger: TAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACT...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTAGTCAGACACTAGTGTaGGTTTGCCTGGACACACGA +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCASQTLV*VCLDTR
Trigger: TCGTGTGTCCAGGCAAACGCACACTAGTGTCTGACT...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTATGAACTTCCGTGTTTaGCACTTCATGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVMNFRV*HFMSGH
Trigger: ATGCCCTGACATGAAGTGGCAAACACGGAAGTTCAT...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCCAGTCTCACCAGCCTaGTTCTCACCCACTATCATC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCPVSPA*FSPTII
Trigger: GATGATAGTGGGTGAGAAGCAGGCTGGTGAGACTGG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAAAGAGGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: IMRLLQTWVICQVYEMKEGFSLC*CLTSVF
Trigger: GAATACAGAGGTCAAACACCAGCACAGGCTGAAACC...CTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTILYLH*HRSRGN
Trigger: ATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAAT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp GATCAGATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DQIMRLLQTWVICQVYEMILYLH*HRSRGN
Trigger: ATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAAT...CATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAATCTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACILYLH*HRSRGN
Trigger: ATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAAT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACATGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTCSRTL*KILYLH
Trigger: GTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACA...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVCSRTL*KILYLH
Trigger: GTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACA...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTTCACCACTTCCTCCTaGCTGTTTATGTTAACATCG +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITFTTSS*LFMLTS
Trigger: CGATGTTAACATAAACAGCCAGGAGGAAGTGGTGAA...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTAAAATGGGACCAGAGCTaGTCACAGCATCTACCAAGA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLKWDQS*SQHLPR
Trigger: TCTTGGTAGATGCTGTGACCAGCTCTGGTCCCATTT...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTAATAGAACCGCTAGGTaGAGCCAAGAGTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVNRTAR*SQEFEG
Trigger: TCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATT...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTGCCTGTGCTGGTGTTTaGCCTCTGTATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCACAGV*PLYSFH
Trigger: ATGGAAGGAATACAGAGGTCAAACACCAGCACAGGC...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTCCATCTCAAGCTGTTTaGGCTTCTCTGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCAPSQAV*ASLRCL
Trigger: AAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGG...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTACAGGAGGAACTCTCATaGCATTCAATCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVQEELS*HSILGS
Trigger: AGAGCCCAGGATTGAATGTCATGAGAGTTCCTCCTG...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCTGCACTGCTTCTACTTaGGCCTTCAAAATGTTACTC +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFICTAST*AFKMLL
Trigger: GAGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCA...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCCAACATATTCTAGCTaGAACGGATCCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCPTYSS*NGSQDG
Trigger: TCCGTCCTGGGATCCGTTTCAGCTAGAATATGTTGG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTCTTCATGTCAGGGCATaGGACAAAGTTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCALHVRA*DKVSSE
Trigger: CTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAG...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAGGCTATGAAATGGACTaGGTTGAGGTTCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVGYEMD*VEVPLL
Trigger: CAGGAGAGGAACCTCAACTCAGTCCATTTCATAGCC...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTACAGGACAGCTTCTTCTaGCAAAATGGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVQDSFF*QNGTRA
Trigger: AGCTCTGGTCCCATTTTGGCAGAAGAAGCTGTCCTG...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTAAGTACTGCTGTGCTGTaGCTTCATTACCTGAGACTA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLSTAVL*LHYLRL
Trigger: TAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACT...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTATCCAGAAGTGTTGGCTaGCTCCAAGTGACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVSRSVG*LQVTGN
Trigger: GTTACCTGTCACTTGGAGGCAGCCAACACTTCTGGA...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCAGCCATTTCCTGTCATaGTGGTCTGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILSHFLS*WSVPGL
Trigger: GAGTCCTGGAACAGACCAGCATGACAGGAAATGGCT...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCTTCTTCTGCCAAAATaGGACCAGAGCTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCLLLPK*DQSWSQ
Trigger: CTGTGACCAGCTCTGGTCCCATTTTGGCAGAAGAAG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGTTCAACAATTCCAGTTaGACGGAAAATACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKFNNSS*TENTAV
Trigger: GACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAA...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTAAATAGAACCGCTAGGTaGAGCCAAGAGTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLNRTAR*SQEFEG
Trigger: TCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATT...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCATCCTTCTTCCCCATaGCAACCGAGGTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCHPSSP*QPRFTL
Trigger: CAAGGTAAACCTCGGTTGCCATGGGGAAGAAGGATG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTATGTCACCTCCTGAACTaGATGGGAGATTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLCHLLN*MGDLGL
Trigger: AAGACCTAAATCTCCCATCCAGTTCAGGAGGTGACA...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAGTATTTACCATCTCTaGTCCTTTACAGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGSIYHL*SFTEQD
Trigger: GTCTTGTTCTGTAAAGGACCAGAGATGGTAAATACT...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCASISSV*IGTNLN
Trigger: GTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGA...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACGCCTGTGCTGGTGTTTaGCCTCTGTATTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNACAGV*PLYSFH
Trigger: ATGGAAGGAATACAGAGGTCAAACACCAGCACAGGC...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTTGCATGCTTTTGGATaGTCCAGTCTAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITLHAFG*SSLKTN
Trigger: ATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAA...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTTCAAAATGTTACTCTTaGAGTCAGGAGGAACTCTCA +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVSKCYS*SQEELS
Trigger: TGAGAGTTCCTCCTGACTTCAAGAGTAACATTTTGA...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGGAAAGTCCAATCCATaGAGTTTTAAGGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLGKSNP*SFKDLR
Trigger: TCTTAGATCCTTAAAACTTCATGGATTGGACTTTCC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTACAAGAGCCCCACCAGTaGAACTCAGAAGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVQEPHQ*NSEAVF
Trigger: AAAAACAGCTTCTGAGTTTCACTGGTGGGGCTCTTG...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTCGGTTGCCAAGACACTaGAAATTTGATGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCARLPRH*KFDAHS
Trigger: GGAATGAGCATCAAATTTTCAGTGTCTTGGCAACCG...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTCTTTCTTCTGACCACTaGAGAGGTACAGTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVLSSDH*RGTVFK
Trigger: TTTAAACACTGTACCTCTTCAGTGGTCAGAAGAAAG...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAATCCTGACAAGTAACTaGATGATCATCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRILTSN*MIISSN
Trigger: ATTGCTTGAGATGATCATTCAGTTACTTGTCAGGAT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAAATTACAAACAGCACTaGACAACTAGTGACTCACTG +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTNYKQH*TTSDSL
Trigger: CAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAACCTTTCCCAAGAGACTaGAGTTTTTCTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCEPFPRD*SFSQIQ
Trigger: CTGTATTTGAGAAAAACTTCAGTCTCTTGGGAAAGG...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAAGCTGCCAATTGCACTaGTGTATCAAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVSCQLH*CIKGTV
Trigger: GACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCT...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCAGCTGCCAATTGCACTaGTGTATCAAAGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILSCQLH*CIKGTV
Trigger: GACTGTCCCTTTGATACAGCAGTGCAATTGGCAGCT...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp ATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAAAGAGCTAGCCTTGACCACATaGATATCAACCCCATACATT +
Preference number: 4 (lower is better)
Translates to: IMRLLQTWVICQVYEMKELALTT*ISTPYI
Trigger: AATGTATGGGGTTGATATGCATGTGGTCAAGGCTAG...CTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAATGCATTTCCTGTCATaGTGGTCTGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVMHFLS*WSVPGL
Trigger: GAGTCCTGGAACAGACCAGCATGACAGGAAATGCAT...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCTTCCATAGTGTCAGATaGCCCAATTACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFIFHSVR*PNYITN
Trigger: ATTGGTGATGTAATTGGGGCATCTGACACTATGGAA...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTTTCCATAGTGTCAGATaGCCCAATTACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVFHSVR*PNYITN
Trigger: ATTGGTGATGTAATTGGGGCATCTGACACTATGGAA...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTTGTAACCTTATGCACTaGTTCTACTTGAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVCNLMH*FYLSLQ
Trigger: TTGAAGGCTCAAGTAGAAGCAGTGCATAAGGTTACA...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACCAGGACAGCTTCTTCTaGCAAAATGGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNQDSFF*QNGTRA
Trigger: AGCTCTGGTCCCATTTTGGCAGAAGAAGCTGTCCTG...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGGAATTCCTAGTGCAATaGAGGTTCTTTCGGTATATG +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVEFLVQ*RFFRYM
Trigger: CATATACCGAAAGAACCTGCATTGCACTAGGAATTC...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAAAGCCATTTCCTGTCATaGTGGTCTGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKSHFLS*WSVPGL
Trigger: GAGTCCTGGAACAGACCAGCATGACAGGAAATGGCT...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVGFSLC*CLTSVF
Trigger: GAATACAGAGGTCAAACACCAGCACAGGCTGAAACC...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAATGTTTGCATGCTTTTaGATGATCCAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRMFACF*MIQSKD
Trigger: GTCTTTAGACTGGATCATCCAAAAGCATGCAAACAT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGCATGACATTCAATCCTaGGCTCTCAATGACATTATT +
Preference number: 4 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKHDIQS*ALNDII
Trigger: AATAATGTCATTGAGAGCCCAGGATTGAATGTCATG...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTTCTCAAGAGACTCTTTaGGGAGGGGCACATTATTCT +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCASQETL*GGAHYS
Trigger: AGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGA...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACCATTCCATCATGTCCTaGGTCAAGCCCCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNHSIMS*VKPLVL
Trigger: TAGAACCAGGGGCTTGACCCAGGACATGATGGAATG...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCCACGAATCTGAACTCTaGGACAAGTTCAGGACTATG +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILHESEL*DKFRTM
Trigger: CATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTG...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCSISSV*IGTNLN
Trigger: GTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILSISSV*IGTNLN
Trigger: GTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGA...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACATTGCATGCTTTTGGATaGTCCAGTCTAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTLHAFG*SSLKTN
Trigger: ATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAA...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGTTGCATGCTTTTGGATaGTCCAGTCTAAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVLHAFG*SSLKTN
Trigger: ATTTGTCTTTAGACTGGATCATCCAAAAGCATGCAA...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCATAAATCCTGATCGATaGGAACTCTTTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILINPDR*ELFWTG
Trigger: CCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTAT...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGATAAATCCTGATCGATaGGAACTCTTTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQINPDR*ELFWTG
Trigger: CCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTAT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTGTCGAAACATTATTGTaGACACTAAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVVETLL*TLSSSG
Trigger: ACCTGAAGAACTTAGTGTTCACAATAATGTTTCGAC...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAGTCGAAACATTATTGTaGACACTAAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MYTINLHDKESQSLRGSTVETLL*TLSSSG
Trigger: ACCTGAAGAACTTAGTGTTCACAATAATGTTTCGAC...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGGAGGCAGGCTTGTTATaGAGTTGTTATGAACAAATA +
Preference number: 4 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVEAGLL*SCYEQI
Trigger: TATTTGTTCATAACAACTTCATAACAAGCCTGCCTC...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTATCTAGAGCAGGTAACTaGAACCTTCACGTCTTATTT +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLSRAGN*NLHVLF
Trigger: AAATAAGACGTGAAGGTTTCAGTTACCTGCTCTAGA...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTATCCTGACAAGTAACTaGATGATCATCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACILTSN*MIISSN
Trigger: ATTGCTTGAGATGATCATTCAGTTACTTGTCAGGAT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAGATAACAAGTAGTCCAGATCCAAGAACCCAAGAACAACTCAGGGCTTTCATCCTGGAACACACTAAATaGATAGTGCACTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: KITSSPDPRTQEQLRAFILEHTK*IVHLIE
Trigger: TTCTATCAAGTGCACTATTCATTTAGTGTGTTCCAG...GATGAAAGCCCTGAGTTGTTCTTGGGTTCTTGGATCTGGACTACTTGTTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp ATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAAAGAGAATCTGTCAGGTGTATaGGATGAAAGAGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IMRLLQTWVICQVYEMKENLSGV*DEREKP
Trigger: TGGCTTTTCTCTTTCATCTCATACACCTGACAGATT...CTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR GCA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCATTGGTTTCAGCCTGTaGTGGTGTTTGACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILIGFSL*WCLTSV
Trigger: TACAGAGGTCAAACACCAGCACAGGCTGAAACCAAT...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTAATTAACGTCATTCAGTaGTTGGGATGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLINVIQ*LGCFHS
Trigger: ACTATGGAAACATCCCAAGCACTGAATGACGTTAAT...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTATTAACGTCATTCAGTaGTTGGGATGTTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVINVIQ*LGCFHS
Trigger: ACTATGGAAACATCCCAAGCACTGAATGACGTTAAT...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGAGTACTGCTGTGCTGTaGCTTCATTACCTGAGACTA +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQSTAVL*LHYLRL
Trigger: TAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR GCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGATGAACTTCCGTGTTTaGCACTTCATGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQMNFRV*HFMSGH
Trigger: ATGCCCTGACATGAAGTGGCAAACACGGAAGTTCAT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTATGAAATGGACGTACAAACAACTCAGTaGAGTGTTTCTAATACAAGT +
Preference number: 4 (lower is better)
Translates to: ILNHPVNSHFPYQGYEMDVQTTQ*SVSNTS
Trigger: ACTTGTATTAGAAACACTGCACTGAGTTGTTTGTAC...GTCCATTTCATAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp ATTATGAGACTGTTGCAAACCTGGGTAATCTGTCAGGTGTATGAGATGAAAGAGAAGGCTGATATATTATaGCTAGACATGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: IMRLLQTWVICQVYEMKEKADIL*LDMLPL
Trigger: CAGTGGAAGCATGTCTAGGCATAATATATCAGCCTT...CTCTTTCATCTCATACACCTGACAGATTACCCAGGTTTGCAACAGTCTCATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTC +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQGFSLC*CLTSVF
Trigger: GAATACAGAGGTCAAACACCAGCACAGGCTGAAACC...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQILYLH*HRSRGN
Trigger: ATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAAT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCCSRTL*KILYLH
Trigger: GTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTATGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVCSRTL*KILYLH
Trigger: GTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACA...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTCATGACATTCAATCCTaGGCTCTCAATGACATTATT +
Preference number: 4 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVHDIQS*ALNDII
Trigger: AATAATGTCATTGAGAGCCCAGGATTGAATGTCATG...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTCTCAAGAGACTCTTTaGGGAGGGGCACATTATTCT +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCSQETL*GGAHYS
Trigger: AGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTAGGAAATCTTCATTTTaGGGCTTAGCTAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACRKSSF*GLAKRR
Trigger: TCTTCTCTTAGCTAAGCCCCAAAATGAAGATTTCCT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATCCTGTTCTTTGCCCTaGTCATCATCTTCTACAACC +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKSCSLP*SSSSTT
Trigger: GGTTGTAGAAGATGATGATCAGGGCAAAGAACAGGA...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACTGGAACACACTAAATaGATAGTGCACTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLLEHTK*IVHLIE
Trigger: TTCTATCAAGTGCACTATTCATTTAGTGTGTTCCAG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATACCATCAACTTGCATaGCAAAGAGTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKYHQLA*QRVPKP
Trigger: AGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTA...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR TCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATAGCTATATGGCTTCCTTaGTTCCTTGTCCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIAIWLP*FLVPFM
Trigger: CATGAAAGGGACAAGGAATCAAGGAAGCCATATAGC...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATACAGGATCAGATTATaGGACTGTTGCAAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKYRIRL*DCCKPG
Trigger: CCCAGGTTTGCAACAGTCTCATAATCTGATCCTGTA...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp ACTGTGTTTTTAGTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGCTTTATTCAGATAATTaGTTTCAGCCTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TVFLVCLILLTSISLDGMLYSDN*FQPVLV
Trigger: CACCAGCACAGGCTGAAACCAATTATCTGAATAAAG...CATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACACTAAAAACACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CCA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTTCACCACTTCCTCCTaGCTGTTTATGTTAACATCG +
Preference number: 4 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCFTTSS*LFMLTS
Trigger: CGATGTTAACATAAACAGCCAGGAGGAAGTGGTGAA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTATGTTTTGTGCAAACGTaGGTTCCAATCACTACAGCT +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVCFVQT*VPITTA
Trigger: AGCTGTAGTGATTGGAACCCACGTTTGCACAAAACA...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTCGAAACATTATTGTaGACACTAAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCAVETLL*TLSSSG
Trigger: ACCTGAAGAACTTAGTGTTCACAATAATGTTTCGAC...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR TCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACTTCAGCATTCAAGTATaGACTTCCGTGTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNFSIQV*TSVFAT
Trigger: AGTGGCAAACACGGAAGTTCATACTTGAATGCTGAA...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACTTTCCAACTTTCTTCTaGCCACTGAAGAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNFPTFF*PLKRYS
Trigger: ACTGTACCTCTTCAGTGGTCAGAAGAAAGTTGGAAA...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTAGCCTTGACCACATaGATATCAACCCCATACATT +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQILALTT*ISTPYI
Trigger: AATGTATGGGGTTGATATGCATGTGGTCAAGGCTAG...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTATTCCATAGTGTCAGATaGCCCAATTACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVFHSVR*PNYITN
Trigger: ATTGGTGATGTAATTGGGGCATCTGACACTATGGAA...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACAACAATGTGGAGTACTaGTGTGCTGTGCCTTCATTA +
Preference number: 4 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNNNVEY*CAVPSL
Trigger: TAATGAAGGCACAGCACAGCAGTACTCCACATTGTT...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR GCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAAATCATGACGGATTCCTaGATTCTTCACATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKIMTDS*ILHIVL
Trigger: GAGCACAATGTGAAGAATGCAGGAATCCGTCATGAT...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATAATCATGACGGATTCCTaGATTCTTCACATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIIMTDS*ILHIVL
Trigger: GAGCACAATGTGAAGAATGCAGGAATCCGTCATGAT...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAACTCATATCTCAGTCATaGCTGTATGGCCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQLISQS*LYGQEN
Trigger: ATTTTCCTGGCCATACAGCCATGACTGAGATATGAG...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAACTCATATCTCAGTCATaGCTGTATGGCCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKLISQS*LYGQEN
Trigger: ATTTTCCTGGCCATACAGCCATGACTGAGATATGAG...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAAAGACTGTTGCAAACCTaGGTAATCTGTCAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKRLLQT*VICQVY
Trigger: ATACACCTGACAGATTACCCAGGTTTGCAACAGTCT...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR TCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAAATTACAAACAGCACTaGACAACTAGTGACTCACTG +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQNYKQH*TTSDSL
Trigger: CAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATT...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGACAAGACAAAAACTCTaGTTCTCGAGACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQTRQKL*FSRLLL
Trigger: AAGTAAGAGTCTCGAGAAGCAGAGTTTTTGTCTTGT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAACTTTATTCAGATAATTaGTTTCAGCCTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKLYSDN*FQPVLV
Trigger: CACCAGCACAGGCTGAAACCAATTATCTGAATAAAG...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTAAGTATTTACCATCTCTaGTCCTTTACAGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVSIYHL*SFTEQD
Trigger: GTCTTGTTCTGTAAAGGACCAGAGATGGTAAATACT...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR TCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAAGTCGAAACATTATTGTaGACACTAAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKVETLL*TLSSSG
Trigger: ACCTGAAGAACTTAGTGTTCACAATAATGTTTCGAC...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATATGTTCCTGTTCTTTaGCCTGATCATCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKYVPVL*PDHHLL
Trigger: TAGAAGATGATGATCAGGGCAAAGAACAGGAACATA...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATATATGTTCCTGTTCTTTaGCCTGATCATCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIYVPVL*PDHHLL
Trigger: TAGAAGATGATGATCAGGGCAAAGAACAGGAACATA...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR GCA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATGTATACCATCAACTTaGATGACAAAGAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKCIPST*MTKSPK
Trigger: TTTGGGACTCTTTGTCATGCAAGTTGATGGTATACA...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATAATGTTTGCATGCTTTTaGATGATCCAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIMFACF*MIQSKD
Trigger: GTCTTTAGACTGGATCATCCAAAAGCATGCAAACAT...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CCA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATGTTTGCATGCTTTTaGATGATCCAGTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQMFACF*MIQSKD
Trigger: GTCTTTAGACTGGATCATCCAAAAGCATGCAAACAT...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS GCA 90 bp CCTCATTGGCCGCCGCCGCCCCTCCCTCCGGCGGGATTAATGCCCTaGCGGCCCGACGAGAGAGGGGCCGGCCGCCCTAGGGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PHWPPPPLPPAGLMP*RPDERGAGRPRVWV
Trigger: CACCCAGACCCTAGGGCGGCCGGCCCCTCTCTCGTCGGGCCGGCAGGGCATTAATCCCGCCGGAGGGAGGGGCGGCGGCGGCCAATGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp TCCCCGCCACCCCACCGTGCTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTTCCCATCTCTAGCCTaGACCACATGCATATCAACC +
Preference number: 5 (lower is better)
Translates to: SPPPHRAPSEACTANPQQFPSLA*TTCIST
Trigger: GGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAA...CTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAGCACGGTGGGGTGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCTCACCCCTGTTCCTATaGCCTATTTTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSEACTANPQQCPRLPLLSPLFL*PILVLV
Trigger: CACCAAGACCAAAATAGGCAATAGGAACAGGGGTGA...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTCTATGAACTTCCGTGTTaGCCACTTCATGTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PSEACTANPQQCPRLPLLYELPC*PLHVRA
Trigger: TGCCCTGACATGAAGTGGCAAACACGGAAGTTCATA...GAGAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTTACATCACCAATCGTaGCTTCCAATAAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFLHHQS*LPISLG
Trigger: GCCCAGACTTATTGGAAGCAACGATTGGTGATGTAA...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS TCA 90 bp TGGGGTGGGGGCAAGGCCCTTGTGTTCCACTGGTTTCCACCACGTTaGCAGCAGTCGCTGGCAGCAGAGAGCCATTTCCTGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: WGGGKALVFHWFPPR*QQSLAAESHFLSCW
Trigger: CCAGCATGACAGGAAATGGCTCTCTGCTGCCAGCGACTGCTGTCAACGTGGTGGAAACCAGTGGAACACAAGGGCCTTGCCCCCACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp CTCCGTCCGAGGCGTGCACGGCAAACCCTCAGCAGTGCCCCCGGCTGCCCCTTCTTGGGAGCCATTACTTaGGGTCGAAACATTATTGTG +
Preference number: 5 (lower is better)
Translates to: LRPRRARQTLSSAPGCPFLGAIT*GRNIIV
Trigger: CACAATAATGTTTCGACCCAAAGTAATGGCTCCCAA...GAAGGGGCAGCCGGGGGCACTGCTGAGGGTTTGCCGTGCACGCCTCGGACGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTAGCCTGTGCTGGTGTTaGACCTCTGTATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSSLCWC*TSVFLP
Trigger: TGGAAGGAATACAGAGGTCAAACACCAGCACAGGCT...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTCCACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTAAACAAGGACTCCTGTaGGTGTTAGTCCCAAACTAT +
Preference number: 5 (lower is better)
Translates to: FSTGLGGVQMPEVNAPGSKQGLL*VLVPNY
Trigger: ATAGTTTGGGACTAACACCAACAGGAGTCCTTGTTT...AGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAATTACATCACCAATCGTaGCTTCCAATAAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQLHHQS*LPISLG
Trigger: GCCCAGACTTATTGGAAGCAACGATTGGTGATGTAA...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAACATCCAGAATTTCTTaGTACAGGCCCAAAGGGATG +
Preference number: 5 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQTSRIS*YRPKGM
Trigger: CATCCCTTTGGGCCTGTACAAAGAAATTCTGGATGT...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAATTATAAGCTGCCAATaGCACTGCTGTATCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQIISCQ*HCCIKG
Trigger: CCCTTTGATACAGCAGTGCAATTGGCAGCTTATAAT...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CCA 90 bp AGCAGAGAGCCATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGAGGAAATGGA +
Preference number: 5 (lower is better)
Translates to: SREPFPVMLVCSRTL*KILYLHWHRSRGNG
Trigger: TCCATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGGCTCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331393.8
ENST00000443124.5
ENST00000495030.1
CDS-3UTR CAA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGAGAAACTCAGCATTTTaGTCACTGAGCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGRNSAF*SLSWGR
Trigger: CCGTCCCCAGCTCAGTGACAAAAATGCTGAGTTTCT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR CAA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTTCGATGAGAACTCTTTaGGACGGGGCCTCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPSMRTL*DGASKA
Trigger: CGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGA...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTC +
Preference number: 5 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGVSRDS*GRGTLF
Trigger: GAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGAC...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTC +
Preference number: 5 (lower is better)
Translates to: EYCCAVPSLPETTAACILVSRDS*GRGTLF
Trigger: GAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGAC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCGGGCTCGGAGGAGTGCAGATGCCTGAGGTAAATGCCCCAGGGTCTCTTCAAATTCAACAATTCCAGTaGGACGGAAAATACAGCTGT +
Preference number: 5 (lower is better)
Translates to: TGLGGVQMPEVNAPGSLQIQQFQ*DGKYSC
Trigger: ACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAAT...TTGAAGAGACCCTGGGGCATTTACCTCAGGCATCTGCACTCCTCCGAGCCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCGCTTTCAAAAGGCTGTaGACTACCAGAGGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: EYCCAVPSLPETTAACILAFKRL*TTRGRL
Trigger: AAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGC...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGCTCCAACCTTTCTCTTaGAACCCATCAAGGATGCCG +
Preference number: 5 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGLQPFS*NPSRMP
Trigger: CGGCATCCTTGATGGGTTCAAAGAGAAAGGTTGGAG...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACATGAAATGGACTGAGTaGAGGTTCCTCTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LAETDPRTECWRDAYSSYMKWTE*RFLSCL
Trigger: CAGACAGGAGAGGAACCTCAACTCAGTCCATTTCAT...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS TCA 90 bp GCTGGTCACAGCATCTACCAAGAATGGCGCTGGGGGAGAGATCAGTaGGATTCCATCTTTATTACCATGTCCCTCCTTCCCTGTCAAAAG +
Preference number: 5 (lower is better)
Translates to: AGHSIYQEWRWGRDQ*DSIFITMSLLPCQK
Trigger: CTTTTGACAGGGAAGGAGGGACATGGTAATAAAGATGGAATCTCACTGATCTCTCCCCCAGCGCCATTCTTGGTAGATGCTGTGACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS CCA 90 bp CAGAGGAATGCATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGAGGAAATGGA +
Preference number: 5 (lower is better)
Translates to: QRNAFPVMLVCSRTL*KILYLHWHRSRGNG
Trigger: TCCATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGCATTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
CDS CCA 90 bp ATGCTGGAGAGATGCGTATTCCAGCTACAGGCCCTCAGAGCTCAGTaGTCAGTAAACACTTCTGCTTCAGGACAGCTTCTTCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: MLERCVFQLQALRAQ*SVNTSASGQLLLPK
Trigger: TTTTGGCAGAAGAAGCTGTCCTGAAGCAGAAGTGTTTACTGACCACTGAGCTCTGAGGGCCTGTAGCTGGAATACGCATCTCTCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCAGCCTGTGCTGGTGTTaGACCTCTGTATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: NNVEYCCAVPSLPETTAASLCWC*TSVFLP
Trigger: TGGAAGGAATACAGAGGTCAAACACCAGCACAGGCT...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGAGCCTGTGCTGGTGTTaGACCTCTGTATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRSLCWC*TSVFLP
Trigger: TGGAAGGAATACAGAGGTCAAACACCAGCACAGGCT...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGATCGATGAGAACTCTTTaGGACGGGGCCTCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRSMRTL*DGASKA
Trigger: CGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGA...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGATGTTAACATCGATGTaGGATCGAGGGGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQMLTSM*DRGDSK
Trigger: TTTGCTGTCCCCTCGATCCAACATCGATGTTAACAT...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTAGCTGAAACGGATCCCAGGACGGAATGCTGGAGAGATGCGTATTCCAGCTACTTAACACAGCACTGTTaGTGGCAGCATCCTGAACAT +
Preference number: 5 (lower is better)
Translates to: LAETDPRTECWRDAYSSYLTQHC*WQHPEH
Trigger: ATGTTCAGGATGCTGCCACAAACAGTGCTGTGTTAA...GTAGCTGGAATACGCATCTCTCCAGCATTCCGTCCTGGGATCCGTTTCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACATCGATGAGAACTCTTTaGGACGGGGCCTCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: MYTINLHDKESQSLRGSTSMRTL*DGASKA
Trigger: CGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGA...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTCGATGAGAACTCTTTaGGACGGGGCCTCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACSMRTL*DGASKA
Trigger: CGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGA...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTACATCCCCCAAGCCTGTaGGGAGCCATTACTTTGGGT +
Preference number: 5 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLHPPSL*GAITLG
Trigger: ACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATG...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp GAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCTGCATTCTCATGTTAACATCGATGTaGGATCGAGGGGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: EYCCAVPSLPETTAACILMLTSM*DRGDSK
Trigger: TTTGCTGTCCCCTCGATCCAACATCGATGTTAACAT...GAGAATGCAGGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAGTGGGGGCAAGGCCCTaGTGTTCCACTGGTTTCCAC +
Preference number: 5 (lower is better)
Translates to: IMYTINLHDKESQSLRGSVGARP*CSTGFH
Trigger: GTGGAAACCAGTGGAACACAAGGGCCTTGCCCCCAC...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS CCA 90 bp CCTAATCCCGGAAGCCTGGTGGCTACATTAACGTCATTCAGTGCTTaGGATGTTTCCATAGTGTCAGATGCCCCAATTACATCACCAATC +
Preference number: 5 (lower is better)
Translates to: PNPGSLVATLTSFSA*DVSIVSDAPITSPI
Trigger: GATTGGTGATGTAATTGGGGCATCTGACACTATGGAAACATCCCAAGCACTGAATGACGTTAATGTAGCCACCAGGCTTCCGGGATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
CDS-3UTR CAA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGCGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRRLEYR*LGLLSK
Trigger: CTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACG...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGATGCACTGCTTCTACTaGAGCCTTCAAAATGTTACT +
Preference number: 5 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQMHCFY*SLQNVT
Trigger: AGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCAT...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TCAAGAGACAGACATCTCCCCTTCCCTACCTGCCACATTCGTAGACCACCTCAGTTCTGCAAAAATGTTTaGTGCAAACGTGGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SRDRHLPFPTCHIRRPPQFCKNV*CKRGFQ
Trigger: TTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA...CTGAGGTGGTCTACGAATGTGGCAGGTAGGGAAGGGGAGATGTCTGTCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGCTCCAACCTTTCTCTTaGAACCCATCAAGGATGCCG +
Preference number: 5 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGLQPFS*NPSRMP
Trigger: CGGCATCCTTGATGGGTTCAAAGAGAAAGGTTGGAG...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACTGTGTTTTTAGTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGCTTCCCTTGCGACTTTaGTCTCTCCCGCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: TVFLVCLILLTSISLDGMLPLRL*SLPLDG
Trigger: GCCGTCCAGCGGGAGAGACAAAAGTCGCAAGGGAAG...CATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACACTAAAAACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp ACCTCGATCTCTTTGGATGGCATGTGGTGGGGGAATAATGGGCACCTTGTTCACCAGATTATGAGACTGTaGCAAACCTGGGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: TSISLDGMWWGNNGHLVHQIMRL*QTWVIC
Trigger: ACAGATTACCCAGGTTTGCAACAGTCTCATAATCTG...GTGAACAAGGTGCCCATTATTCCCCCACCACATGCCATCCAAAGAGATCGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS CCA 90 bp ACTAAACAAACATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGAGGAAATGGA +
Preference number: 5 (lower is better)
Translates to: TKQTFPVMLVCSRTL*KILYLHWHRSRGNG
Trigger: TCCATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGTTTGTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489017.5
CDS-3UTR CAA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCAGAAACTCAGCATTTTaGTCACTGAGCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITRNSAF*SLSWGR
Trigger: CCGTCCCCAGCTCAGTGACAAAAATGCTGAGTTTCT...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000443902.6
CDS-3UTR CAA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTACATCCCCCAAGCCTGTaGGGAGCCATTACTTTGGGT +
Preference number: 5 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLHPPSL*GAITLG
Trigger: ACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATG...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAGTTACATGATACGTGTGTGGTGCCTGTGAGTGCTTCCTGTGGAAAGGCAGGGATGCACTGCTTCTACTaGAGCCTTCAAAATGTTACT +
Preference number: 5 (lower is better)
Translates to: KLHDTCVVPVSASCGKAGMHCFY*SLQNVT
Trigger: AGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCAT...CCCTGCCTTTCCACAGGAAGCACTCACAGGCACCACACACGTATCATGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAGCTTTCAAAAGGCTGTaGACTACCAGAGGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLAFKRL*TTRGRL
Trigger: AAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGC...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCGACACTAGTGTGCGTTaGCCTGGACACACGATTATG +
Preference number: 5 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITDTSVR*PGHTIM
Trigger: CATAATCGTGTGTCCAGGCAAACGCACACTAGTGTC...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTATGAACTTCCGTGTTaGCCACTTCATGTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGYELPC*PLHVRA
Trigger: TGCCCTGACATGAAGTGGCAAACACGGAAGTTCATA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCCTGGTTTCCACCACGTaGACAGCAGTCGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILLVSTT*TAVAGS
Trigger: GCTGCCAGCGACTGCTGTCAACGTGGTGGAAACCAG...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCGTGGGGGCAAGGCCCTaGTGTTCCACTGGTTTCCAC +
Preference number: 5 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILVGARP*CSTGFH
Trigger: GTGGAAACCAGTGGAACACAAGGGCCTTGCCCCCAC...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS TCA 90 bp AGCCAGTTCCATCTCTTCAGTCTGAATAGGCACGAATCTGAACTCTaGGACAAGTTCAGGACTATGCTCAGCAAGATCATAGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: SQFHLFSLNRHESEL*DKFRTMLSKIIVTK
Trigger: CTTGGTGACTATGATCTTGCTGAGCATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGAACTGGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS CCA 90 bp AAAGAGTCCCAAAGCCTAAGAGGCTCAACACTCATATCTCAGTCATaGCTGTATGGCCAGGAAAATGAACATCATGACGGATTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: KESQSLRGSTLISQS*LYGQENEHHDGFLH
Trigger: ATGCAGGAATCCGTCATGATGTTCATTTTCCTGGCCATACAGCCATGACTGAGATATGAGTGTTGAGCCTCTTAGGCTTTGGGACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAAGAAACTCAGCATTTTaGTCACTGAGCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: MYTINLHDKESQSLRGSTRNSAF*SLSWGR
Trigger: CCGTCCCCAGCTCAGTGACAAAAATGCTGAGTTTCT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331393.8
CDS-3UTR CAA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTGTCACCAAGTTCAGCTaGCAGATTATAAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPVTKFS*QIISCQ
Trigger: TTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGAC...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp CTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTTCCCATCTCTAGCCTaGACCACATGCATATCAACC +
Preference number: 5 (lower is better)
Translates to: LCPNRKQCGVLLCCAFITFPSLA*TTCIST
Trigger: GGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAA...GGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGCGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGRLEYR*LGLLSK
Trigger: CTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACG...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TCTTCAACAGTAACCCACCCCACTGATAAGTTACATGATACGTGTGTGGTGCCTAACGTCATTCAGTGCTaGGGATGTTTCCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: SSTVTHPTDKLHDTCVVPNVIQC*GCFHSV
Trigger: GACACTATGGAAACATCCCAAGCACTGAATGACGTT...AGGCACCACACACGTATCATGTAACTTATCAGTGGGGTGGGTTACTGTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTC +
Preference number: 5 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVVSRDS*GRGTLF
Trigger: GAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGAC...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AACAATGTGGAGTACTGCTGTGCTGTGCCTTCATTACCTGAGACTACAGCAGCCATTCAACAATTCCAGTaGGACGGAAAATACAGCTGT +
Preference number: 5 (lower is better)
Translates to: NNVEYCCAVPSLPETTAAIQQFQ*DGKYSC
Trigger: ACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAAT...GGCTGCTGTAGTCTCAGGTAATGAAGGCACAGCACAGCAGTACTCCACATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp CAGACACTAGTGTGCGTTTGCCTGGACACACGATTATGTTATAAGGAGCCCAGGTTCTGCAAAAATGTTTaGTGCAAACGTGGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: QTLVCVCLDTRLCYKEPRFCKNV*CKRGFQ
Trigger: TTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA...CCTGGGCTCCTTATAACATAATCGTGTGTCCAGGCAAACGCACACTAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS TCA 90 bp TGGATCGAGGGGACAGCAAAGGACTGTTCTCCATCTCAAGCTGTTTaGGCTTCTCTGAGGTGTCTTTTAATGTCTCATATTCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: WIEGTAKDCSPSQAV*ASLRCLLMSHIQLQ
Trigger: CTGAAGTTGAATATGAGACATTAAAAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGAGAACAGTCCTTTGCTGTCCCCTCGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAAGCCTGTGCTGGTGTTaGACCTCTGTATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: IMYTINLHDKESQSLRGSSLCWC*TSVFLP
Trigger: TGGAAGGAATACAGAGGTCAAACACCAGCACAGGCT...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACATTCCCATCTCTAGCCTaGACCACATGCATATCAACC +
Preference number: 5 (lower is better)
Translates to: MYTINLHDKESQSLRGSTFPSLA*TTCIST
Trigger: GGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAA...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp AAGAACAACTCAGGGCTTTCATCCTTAAATCTCCATAGGATATCTGTGATTGTACATCCCCCAAGCCTGTaGGGAGCCATTACTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KNNSGLSSLNLHRISVIVHPPSL*GAITLG
Trigger: ACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATG...TACAATCACAGATATCCTATGGAGATTTAAGGATGAAAGCCCTGAGTTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTTTCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTCATCCCCCAAGCCTGTaGGGAGCCATTACTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LSWKNSITNSTEQLVTHCHPPSL*GAITLG
Trigger: ACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATG...ACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp CATAGCTCTACCAATGTGTTAACACAACCCAGTTCAGCTCAGGGCAAATTTCTATCCATCTCAAGCTGTTaGAGCTTCTCTGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HSSTNVLTQPSSAQGKFLSISSC*SFSEVS
Trigger: AGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGA...TAGAAATTTGCCCTGAGCTGAACTGGGTTGTGTTAACACATTGGTAGAGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGAATGTTAACATCGATGTaGGATCGAGGGGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRMLTSM*DRGDSK
Trigger: TTTGCTGTCCCCTCGATCCAACATCGATGTTAACAT...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TGCCACTTCATGTCAGGGCATGAGACAAAGTTTCCTCTGAGCTTGAAATTCAAGTTAACACAGCACTGTTaGTGGCAGCATCCTGAACAT +
Preference number: 5 (lower is better)
Translates to: CHFMSGHETKFPLSLKFKLTQHC*WQHPEH
Trigger: ATGTTCAGGATGCTGCCACAAACAGTGCTGTGTTAA...CTTGAATTTCAAGCTCAGAGGAAACTTTGTCTCATGCCCTGACATGAAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp AGACCAAACACTCTCTTTTGGGCAGCTATGCAGTGTGATTCAACAATTCCAGTTTCACCCCTGTTCCTATaGCCTATTTTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RPNTLFWAAMQCDSTIPVSPLFL*PILVLV
Trigger: CACCAAGACCAAAATAGGCAATAGGAACAGGGGTGA...AACTGGAATTGTTGAATCACACTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGAGCCAGCAAGAAGTGTaGACTTTCCTTCTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGSQQEV*TFLLQK
Trigger: TTTTTGCAGAAGGAAAGTCAACACTTCTTGCTGGCT...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTATGAAATGGACTGAGTaGAGGTTCCTCTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACMKWTE*RFLSCL
Trigger: CAGACAGGAGAGGAACCTCAACTCAGTCCATTTCAT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGGTCACCAAGTTCAGCTaGCAGATTATAAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVVTKFS*QIISCQ
Trigger: TTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGAC...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCATTCCCATCTCTAGCCTaGACCACATGCATATCAACC +
Preference number: 5 (lower is better)
Translates to: IMYTINLHDKESQSLRGSFPSLA*TTCIST
Trigger: GGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAA...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTATTCCCATCTCTAGCCTaGACCACATGCATATCAACC +
Preference number: 5 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLFPSLA*TTCIST
Trigger: GGTTGATATGCATGTGGTCAAGGCTAGAGATGGGAA...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAACATCCCCCAAGCCTGTaGGGAGCCATTACTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKHPPSL*GAITLG
Trigger: ACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATG...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGACACTAGTGTGCGTTaGCCTGGACACACGATTATG +
Preference number: 5 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCADTSVR*PGHTIM
Trigger: CATAATCGTGTGTCCAGGCAAACGCACACTAGTGTC...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAAAGAAACTCAGCATTTTaGTCACTGCCTCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCERNSAF*SLPLLS
Trigger: GGAAAGGAGAGGCAGTGACAAAAATGCTGAGTTTCT...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCTTAACCTCGATCTCTTaGGATGGCATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILLTSIS*DGMWWG
Trigger: CCCCCACCACATGCCATCCAAAGAGATCGAGGTTAA...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS GCA 90 bp AGTCATGGCTGTATGGCCAGGAAAATGAACATCATGACGGATTCCTaGATTCTTCACATTGTGCTCATGAACAAAGTCAGTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SHGCMARKMNIMTDS*ILHIVLMNKVSVVS
Trigger: AGAAACTACACTGACTTTGTTCATGAGCACAATGTGAAGAATGCAGGAATCCGTCATGATGTTCATTTTCCTGGCCATACAGCCATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAACAATTATAAGCTGCCAATaGCACTGCTGTATCAAAGGG +
Preference number: 5 (lower is better)
Translates to: MYTINLHDKESQSLRGSTIISCQ*HCCIKG
Trigger: CCCTTTGATACAGCAGTGCAATTGGCAGCTTATAAT...TGTTGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATAATGTATACCATCAACTTGCATGACAAAGAGTCCCAAAGCCTAAGAGGCTCAGTCACCAAGTTCAGCTaGCAGATTATAAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: IMYTINLHDKESQSLRGSVTKFS*QIISCQ
Trigger: TTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGAC...TGAGCCTCTTAGGCTTTGGGACTCTTTGTCATGCAAGTTGATGGTATACATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTAAACGTCATTCAGTGCTaGGGATGTTTCCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLNVIQC*GCFHSV
Trigger: GACACTATGGAAACATCCCAAGCACTGAATGACGTT...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTTCCATCTCAAGCTGTTaGAGCTTCTCTGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCASISSC*SFSEVS
Trigger: AGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGA...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCACGTCTTATTTTAAACCATCCTGTCAACTCCCACTTCCCCTATCAGGGCTAATTCAACAATTCCAGTaGGACGGAAAATACAGCTGT +
Preference number: 5 (lower is better)
Translates to: FTSYFKPSCQLPLPLSGLIQQFQ*DGKYSC
Trigger: ACAGCTGTATTTTCCGTCCAACTGGAATTGTTGAAT...TAGCCCTGATAGGGGAAGTGGGAGTTGACAGGATGGTTTAAAATAAGACGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ATACTAGATGGAAATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTAGCCAGCAAGAAGTGTaGACTTTCCTTCTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ILDGNSFQKAVDYQRQACSQQEV*TFLLQK
Trigger: TTTTTGCAGAAGGAAAGTCAACACTTCTTGCTGGCT...ACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTATTTCCATCTAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TTCTGCAAAAATGTTTTGTGCAAACGTGGGTTCCAATCACTACAGCTCCCTGGGTTTAAAATAAGGATGTaGTCACCTCCTGAACTGGAT +
Preference number: 5 (lower is better)
Translates to: FCKNVLCKRGFQSLQLPGFKIRM*SPPELD
Trigger: ATCCAGTTCAGGAGGTGACAACATCCTTATTTTAAA...CCCAGGGAGCTGTAGTGATTGGAACCCACGTTTGCACAAAACATTTTTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACCTTGTTCACAAACACAAACCTTCTCCTGAGATACAGTCTGGTGATGTGTGAATGCTATATGGCTTCCTaGATTCCTTGTCCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: TLFTNTNLLLRYSLVMCECYMAS*IPCPFH
Trigger: ATGAAAGGGACAAGGAATCAAGGAAGCCATATAGCA...TTCACACATCACCAGACTGTATCTCAGGAGAAGGTTTGTGTTTGTGAACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS TCA 90 bp TATTCCTTCCATTTCTCAAAAATAGCCAGTTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAACTCTGAGACAAGTTCAGGACTATGC +
Preference number: 5 (lower is better)
Translates to: YSFHFSKIASSISSV*IGTNLNSETSSGLC
Trigger: GCATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGAACTGGCTATTTTTGAGAAATGGAAGGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ACTGTGTTTTTAGTGTGTCTGATTCTTTTAACCTCGATCTCTTTGGATGGCATGGTCACCAAGTTCAGCTaGCAGATTATAAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: TVFLVCLILLTSISLDGMVTKFS*QIISCQ
Trigger: TTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGAC...CATGCCATCCAAAGAGATCGAGGTTAAAAGAATCAGACACACTAAAAACACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp TCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAAAGCCTGTGCTGGTGTTaGACCTCTGTATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SWKNSITNSTEQLVTHCKSLCWC*TSVFLP
Trigger: TGGAAGGAATACAGAGGTCAAACACCAGCACAGGCT...TTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTTCCATCTCAAGCTGTTaGAGCTTCTCTGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCSISSC*SFSEVS
Trigger: AGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGA...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp GGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTGTGATGCACTGCTTCTACTaGAGCCTTCAAAATGTTACT +
Preference number: 5 (lower is better)
Translates to: GNEVYVQIGNNVEYCCAVMHCFY*SLQNVT
Trigger: AGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCAT...CACAGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTACATCCAGAATTTCTTaGTACAGGCCCAAAGGGATG +
Preference number: 5 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCATSRIS*YRPKGM
Trigger: CATCCCTTTGGGCCTGTACAAAGAAATTCTGGATGT...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ACAAATAGAACCGCTAGGTGGAGCCAAGAGTTTGAAGGAAACCCCAGAAAAAGACAAGACACTGAAAATTaGATGCTCATTCCATCATGT +
Preference number: 5 (lower is better)
Translates to: TNRTARWSQEFEGNPRKRQDTEN*MLIPSC
Trigger: ACATGATGGAATGAGCATCAAATTTTCAGTGTCTTG...TCTTTTTCTGGGGTTTCCTTCAAACTCTTGGCTCCACCTAGCGGTTCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS CCA 90 bp AATGTTACTCTTGAAGTCAGGAGGAACTCTCATGACATTCAATCCTaGGCTCTCAATGACATTATTAAGGCATTTCTCAGTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: NVTLEVRRNSHDIQS*ALNDIIKAFLSQLH
Trigger: GTGAAGTTGACTGAGAAATGCCTTAATAATGTCATTGAGAGCCCAGGATTGAATGTCATGAGAGTTCCTCCTGACTTCAAGAGTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTGTCACCAAGTTCAGCTaGCAGATTATAAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCVTKFS*QIISCQ
Trigger: TTGGCAGCTTATAATCTGCAAGCTGAACTTGGTGAC...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACTCCGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: ITNSTEQLVTHCKFSQILRLEYR*LGLLSK
Trigger: CTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACG...GAGTATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGCGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQRLEYR*LGLLSK
Trigger: CTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACG...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp AAAGGAAATGAAGTCTATGTCCAAATAGGAAACAATGTGGAGTACTGCTGTGCTTTGGGAGCCATTACTTaGGGTCGAAACATTATTGTG +
Preference number: 5 (lower is better)
Translates to: KGNEVYVQIGNNVEYCCALGAIT*GRNIIV
Trigger: CACAATAATGTTTCGACCCAAAGTAATGGCTCCCAA...AGCACAGCAGTACTCCACATTGTTTCCTATTTGGACATAGACTTCATTTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTAACGTCATTCAGTGCTaGGGATGTTTCCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCNVIQC*GCFHSV
Trigger: GACACTATGGAAACATCCCAAGCACTGAATGACGTT...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGAAACAAGGACTCCTGTaGGTGTTAGTCCCAAACTAT +
Preference number: 5 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQKQGLL*VLVPNY
Trigger: ATAGTTTGGGACTAACACCAACAGGAGTCCTTGTTT...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATACGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIRLEYR*LGLLSK
Trigger: CTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACG...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp TATAAAAGTATAGAAAGTTCAAGACCAAACACTCTCTTTTGGGCAGCTATGCAGTTGGGAGCCATTACTTaGGGTCGAAACATTATTGTG +
Preference number: 5 (lower is better)
Translates to: YKSIESSRPNTLFWAAMQLGAIT*GRNIIV
Trigger: CACAATAATGTTTCGACCCAAAGTAATGGCTCCCAA...CTGCATAGCTGCCCAAAAGAGAGTGTTTGGTCTTGAACTTTCTATACTTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS-3UTR CAA 90 bp CTTTCGGTATATGCTGTGTATAGCTTCATACATGGTAGGTATTTAAGAAACAACTTACATCACCAATCGTaGCTTCCAATAAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSVYAVYSFIHGRYLRNNLHHQS*LPISLG
Trigger: GCCCAGACTTATTGGAAGCAACGATTGGTGATGTAA...GTTGTTTCTTAAATACCTACCATGTATGAAGCTATACACAGCATATACCGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp ATAGCTTTCAAAAGGCTGTTGACTACCAGAGGCAGGCTTGTTATGAAGTTGTTATTTAAAATAAGGATGTaGTCACCTCCTGAACTGGAT +
Preference number: 5 (lower is better)
Translates to: IAFKRLLTTRGRLVMKLLFKIRM*SPPELD
Trigger: ATCCAGTTCAGGAGGTGACAACATCCTTATTTTAAA...TAACAACTTCATAACAAGCCTGCCTCTGGTAGTCAACAGCCTTTTGAAAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS-3UTR CAA 90 bp CTTTCATGGAAGAATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTGGAATAATGGGCACCTaGTTCACAAACACAAACCTT +
Preference number: 5 (lower is better)
Translates to: LSWKNSITNSTEQLVTHCGIMGT*FTNTNL
Trigger: AAGGTTTGTGTTTGTGAACAAGGTGCCCATTATTCC...ACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATTCTTCCATGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS-3UTR CAA 90 bp TCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAAATAAAACAAGGACTCCTGTaGGTGTTAGTCCCAAACTAT +
Preference number: 5 (lower is better)
Translates to: SITNSTEQLVTHCKFSQIKQGLL*VLVPNY
Trigger: ATAGTTTGGGACTAACACCAACAGGAGTCCTTGTTT...TATTTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp AATTCAATTACAAACAGCACTGAACAACTAGTGACTCACTGTAAATTCTCCCAATTGGGAGCCATTACTTaGGGTCGAAACATTATTGTG +
Preference number: 5 (lower is better)
Translates to: NSITNSTEQLVTHCKFSQLGAIT*GRNIIV
Trigger: CACAATAATGTTTCGACCCAAAGTAATGGCTCCCAA...TTGGGAGAATTTACAGTGAGTCACTAGTTGTTCAGTGCTGTTTGTAATTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS-3UTR CAA 90 bp ATTCTAACTGTCAAGAATACAGGTATCCAACGACATAAAGGTCACAGACTATGTCAAGACACTGAAAATTaGATGCTCATTCCATCATGT +
Preference number: 5 (lower is better)
Translates to: ILTVKNTGIQRHKGHRLCQDTEN*MLIPSC
Trigger: ACATGATGGAATGAGCATCAAATTTTCAGTGTCTTG...ACATAGTCTGTGACCTTTATGTCGTTGGATACCTGTATTCTTGACAGTTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000452780.1
CDS GCA 72 bp CCGCCGCCGCCCCTCCCTCCGGCGGGATTAATGCCCTaGCGGCCCGACGAGAGAGGGGCCGGCCGCCCTAGG +
Preference number: 6 (lower is better)
Translates to: PPPPLPPAGLMP*RPDERGAGRPR
Trigger: CCTAGGGCGGCCGGCCCCTCTCTCGTCGGGCCGGCAGGGCATTAATCCCGCCGGAGGGAGGGGCGGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS CCA 72 bp CGCGGTATCGACCGAAACTCGGCGGCCCTGCCTCATTaGCCGCCGCCGCCCCTCCCTCCGGCGGGATTAATG +
Preference number: 6 (lower is better)
Translates to: RGIDRNSAALPH*PPPPLPPAGLM
Trigger: CATTAATCCCGCCGGAGGGAGGGGCGGCGGCGGCCAATGAGGCAGGGCCGCCGAGTTTCGGTCGATACCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS CAA 90 bp CTGGGGTGGGGGCAAGGCCCTTGTGTTCCACTGGTTTCCACCACGTaGACAGCAGTCGCTGGCAGCAGAGAGCCATTTCCTGTCATGCTG +
Preference number: 6 (lower is better)
Translates to: LGWGQGPCVPLVSTT*TAVAGSREPFPVML
Trigger: CAGCATGACAGGAAATGGCTCTCTGCTGCCAGCGACTGCTGTCAACGTGGTGGAAACCAGTGGAACACAAGGGCCTTGCCCCCACCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS CAA 90 bp AGTCAGTGTAGTTTCTATGTGCGGTCTGGGGTGGGGGCAAGGCCCTaGTGTTCCACTGGTTTCCACCACGTTGACAGCAGTCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SQCSFYVRSGVGARP*CSTGFHHVDSSRWQ
Trigger: CTGCCAGCGACTGCTGTCAACGTGGTGGAAACCAGTGGAACACAAGGGCCTTGCCCCCACCCCAGACCGCACATAGAAACTACACTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS CAA 72 bp CAAACTCAGTTCGTTTTTCCCCTTCCCTTGCGACTTTaGTCTCTCCCGCTGGACGGCAGCCCAGCGGACCAG +
Preference number: 6 (lower is better)
Translates to: QTQFVFPLPLRL*SLPLDGSPADQ
Trigger: CTGGTCCGCTGGGCTGCCGTCCAGCGGGAGAGACAAAAGTCGCAAGGGAAGGGGAAAAACGAACTGAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443124.5
CDS TCA 72 bp ACATGGCACCACTCTGCGGAACAATCCACCGGGGTGTaGTCATGGATGTGGAAGACACCTGAGGTGCAACTG +
Preference number: 6 (lower is better)
Translates to: TWHHSAEQSTGV*SWMWKTPEVQL
Trigger: CAGTTGCACCTCAGGTGTCTTCCACATCCATGATCACACCCCGGTGGATTGTTCCGCAGAGTGGTGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263713.10
ENST00000488691.1
CDS TCA 72 bp CAAAATGGGACCAGAGCGGAACAATCCACCGGGGTGTaGTCATGGATGTGGAAGACACCTGAGGTGCAACTG +
Preference number: 6 (lower is better)
Translates to: QNGTRAEQSTGV*SWMWKTPEVQL
Trigger: CAGTTGCACCTCAGGTGTCTTCCACATCCATGATCACACCCCGGTGGATTGTTCCGCTCTGGTCCCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443902.6
CDS CCA 72 bp TGTTCCAGGACTCTGTGGAAGATTCTCTATCTCCACTaGCACAGGAGCAGAGGAAATGGAAGGACTCACAGG +
Preference number: 6 (lower is better)
Translates to: CSRTLWKILYLH*HRSRGNGRTHR
Trigger: CCTGTGAGTCCTTCCATTTCCTCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
ENST00000489017.5
ENST00000495030.1
CDS CCA 72 bp GCATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: AFPVMLVCSRTL*KILYLHWHRSR
Trigger: TCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
CDS CCA 72 bp CCATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PFPVMLVCSRTL*KILYLHWHRSR
Trigger: TCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331393.8
ENST00000443124.5
ENST00000495030.1
CDS GCA 72 bp TCCCGGAAGCCTGGTGGCTACATTAACGTCATTCAGTaGTTGGGATGTTTCCATAGTGTCAGATGCCCCAAT +
Preference number: 6 (lower is better)
Translates to: SRKPGGYINVIQ*LGCFHSVRCPN
Trigger: ATTGGGGCATCTGACACTATGGAAACATCCCAAGCACTGAATGACGTTAATGTAGCCACCAGGCTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
CDS CCA 72 bp AGATGCGTATTCCAGCTACAGGCCCTCAGAGCTCAGTaGTCAGTAAACACTTCTGCTTCAGGACAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: RCVFQLQALRAQ*SVNTSASGQLL
Trigger: AAGAAGCTGTCCTGAAGCAGAAGTGTTTACTGACCACTGAGCTCTGAGGGCCTGTAGCTGGAATACGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CCA 72 bp ACATTTCCTGTCATGCTGGTCTGTTCCAGGACTCTGTaGAAGATTCTCTATCTCCACTGGCACAGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: TFPVMLVCSRTL*KILYLHWHRSR
Trigger: TCTGCTCCTGTGCCAGTGGAGATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489017.5
CDS TCA 72 bp CTAAATCGTGATCCTAGTCGAATAAATCCTGATCGATaGGAACTCTTTTGGACGGGGCCTCGAAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: LNRDPSRINPDR*ELFWTGPRRRK
Trigger: CTTCCGCCTTCGAGGCCCCGTCCAAAAGAGTTCTCATCGATCAGGATTTATTCGACTAGGATCACGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS CAA 72 bp ACCACTTCCTCCTGGCTGTTTATGTTAACATCGATGTaGGATCGAGGGGACAGCAAAGGACTGTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: TTSSWLFMLTSM*DRGDSKGLFSI
Trigger: GATGGAGAACAGTCCTTTGCTGTCCCCTCGATCCAACATCGATGTTAACATAAACAGCCAGGAGGAAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CAA 90 bp CCACTGTCGGCAGGTGTGATAAGCATCAGAGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTCTCATTTAACACAGCACTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: PLSAGVISIRVSRDS*GRGTLFSFNTALFV
Trigger: CACAAACAGTGCTGTGTTAAATGAGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGACTCTGATGCTTATCACACCTGCCGACAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CAA 90 bp CCACTGTCGGCAGGTGTGATAAGCATCAGAGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTCTCATTTAACACAGCACTAGGAAGA +
Preference number: 6 (lower is better)
Translates to: PLSAGVISIRVSRDS*GRGTLFSFNTALGR
Trigger: TCTTCCTAGTGCTGTGTTAAATGAGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGACTCTGATGCTTATCACACCTGCCGACAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488691.1
CDS CCA 72 bp CAAAGCCTAAGAGGCTCAACACTCATATCTCAGTCATaGCTGTATGGCCAGGAAAATGAACATCATGACGGA +
Preference number: 6 (lower is better)
Translates to: QSLRGSTLISQS*LYGQENEHHDG
Trigger: TCCGTCATGATGTTCATTTTCCTGGCCATACAGCCATGACTGAGATATGAGTGTTGAGCCTCTTAGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS CAA 72 bp GCAGGTGTGATAAGCATCAGAGTCTCAAGAGACTCTTaGGGGAGGGGCACATTATTCTCATTTAACACAGCA +
Preference number: 6 (lower is better)
Translates to: AGVISIRVSRDS*GRGTLFSFNTA
Trigger: TGCTGTGTTAAATGAGAATAATGTGCCCCTCCCCAAAGAGTCTCTTGAGACTCTGATGCTTATCACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
ENST00000488691.1
CDS CAA 72 bp AGATCTCATCCCCCAAGCCTGTTGGGAGCCATTACTTaGGGTCGAAACATTATTGTGAACACTAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: RSHPPSLLGAIT*GRNIIVNTKFF
Trigger: GAAGAACTTAGTGTTCACAATAATGTTTCGACCCAAAGTAATGGCTCCCAACAGGCTTGGGGGATGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
ENST00000461128.1
ENST00000489017.5
CDS CAA 72 bp GGGGACAGCAAAGGACTGTTCTCCATCTCAAGCTGTTaGAGCTTCTCTGAGGTGTCTTTTAATGTCTCATAT +
Preference number: 6 (lower is better)
Translates to: GDSKGLFSISSC*SFSEVSFNVSY
Trigger: ATATGAGACATTAAAAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGAGAACAGTCCTTTGCTGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CAA 90 bp TTGGATCGAGGGGACAGCAAAGGACTGTTCTCCATCTCAAGCTGTTaGAGCTTCTCTGAGGTGTCTTTTAATGTCTCATATTCAACTTCA +
Preference number: 6 (lower is better)
Translates to: LDRGDSKGLFSISSC*SFSEVSFNVSYSTS
Trigger: TGAAGTTGAATATGAGACATTAAAAGACACCTCAGAGAAGCTCAAACAGCTTGAGATGGAGAACAGTCCTTTGCTGTCCCCTCGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS TCA 72 bp CATCTCTTCAGTCTGAATAGGCACGAATCTGAACTCTaGGACAAGTTCAGGACTATGCTCAGCAAGATCATA +
Preference number: 6 (lower is better)
Translates to: HLFSLNRHESEL*DKFRTMLSKII
Trigger: TATGATCTTGCTGAGCATAGTCCTGAACTTGTCTCAGAGTTCAGATTCGTGCCTATTCAGACTGAAGAGATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS GCA 72 bp TGTATGGCCAGGAAAATGAACATCATGACGGATTCCTaGATTCTTCACATTGTGCTCATGAACAAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: CMARKMNIMTDS*ILHIVLMNKVS
Trigger: ACTGACTTTGTTCATGAGCACAATGTGAAGAATGCAGGAATCCGTCATGATGTTCATTTTCCTGGCCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331393.8
ENST00000443124.5
CDS CCA 72 bp CTTGAAGTCAGGAGGAACTCTCATGACATTCAATCCTaGGCTCTCAATGACATTATTAAGGCATTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: LEVRRNSHDIQS*ALNDIIKAFLS
Trigger: ACTGAGAAATGCCTTAATAATGTCATTGAGAGCCCAGGATTGAATGTCATGAGAGTTCCTCCTGACTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CCA 72 bp AGATTTCAGGTACTAAACAAACATTTCCTGTCATGCTaGTCTGTTCCAGGACTCTGTGGAAGATTCTCTATC +
Preference number: 6 (lower is better)
Translates to: RFQVLNKHFLSC*SVPGLCGRFSI
Trigger: GATAGAGAATCTTCCACAGAGTCCTGGAACAGACCAGCATGACAGGAAATGTTTGTTTAGTACCTGAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489017.5
CDS TCA 72 bp CATTTCTCAAAAATAGCCAGTTCCATCTCTTCAGTCTaGATAGGCACGAATCTGAACTCTGAGACAAGTTCA +
Preference number: 6 (lower is better)
Translates to: HFSKIASSISSV*IGTNLNSETSS
Trigger: TGAACTTGTCTCAGAGTTCAGATTCGTGCCTATTCAGACTGAAGAGATGGAACTGGCTATTTTTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS CAA 72 bp GCTATCTTCTTTTGTAACCTTATGCACTGCTTCTACTaGAGCCTTCAAAATGTTACTCTTGAAGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AIFFCNLMHCFY*SLQNVTLEVRR
Trigger: CCTCCTGACTTCAAGAGTAACATTTTGAAGGCTCAAGTAGAAGCAGTGCATAAGGTTACAAAAGAAGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263713.10
ENST00000443902.6
ENST00000452780.1
CDS CCA 72 bp TTTGGCTTTATTCAGATAATTGGTTTCAGCCTGTGCTaGTGTTTGACCTCTGTATTCCTTCCATTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: FGFIQIIGFSLC*CLTSVFLPFLK
Trigger: TTTGAGAAATGGAAGGAATACAGAGGTCAAACACCAGCACAGGCTGAAACCAATTATCTGAATAAAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
CDS CAA 72 bp CATGCTTTCATTTGTAGAGTTCGTCTAGAATATCGTTaGCTGGGCCTTCTTTCAAAGGATGTTGATCTTCTT +
Preference number: 6 (lower is better)
Translates to: HAFICRVRLEYR*LGLLSKDVDLL
Trigger: AAGAAGATCAACATCCTTTGAAAGAAGGCCCAGCAAACGATATTCTAGACGAACTCTACAAATGAAAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263713.10
ENST00000331393.8
ENST00000443124.5
ENST00000443902.6
ENST00000452780.1
ENST00000489017.5