RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENTHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176177

Ensembl transcript IDs: ENST00000325157.7, ENST00000490326.1

Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp AAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTaGTTAACAAGCTCCATACAGTTGAAAGATAAAGAGCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: KCIPPNSILLGHLRG*LTSSIQLKDKELLP
Trigger: AGGAAGAAGCTCTTTATCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
3UTR-3UTR TCA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTACAAGCTCCATACAGTTaGAAGATAAAGAGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLQAPYS*KIKSFF
Trigger: GAAGAAGCTCTTTATCTTTCAACTGTATGGAGCTTG...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
3UTR-3UTR CAA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAAGGTCACCTCAGAGGCTaGTTAACAAGCTCCATACAG +
Preference number: 3 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKGHLRG*LTSSIQ
Trigger: CTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACC...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
3UTR-3UTR CAA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAACAAGCTCCATACAGTaGAAAGATAAAGAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLTSSIQ*KDKELL
Trigger: AAGAAGCTCTTTATCTTTCAACTGTATGGAGCTTGT...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATCTCCCCTCAGAAGACTaGGGGACCTGGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHLPSED*GTWEDW
Trigger: CCAGTCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAG...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACGTGTGGGGGCAGAAGTaGACGCTGTCAGTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNVWGQK*TLSVSY
Trigger: GTAACTCACTGACAGCGTGCACTTCTGCCCCCACAC...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATAACAGGACAGAGGGATaGACTGGTCTACATTTTGGG +
Preference number: 4 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHNRTEG*TGLHFG
Trigger: CCCAAAATGTAGACCAGTTCATCCCTCTGTCCTGTT...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTACGCCAGTTCTTCCCATaGTCATTGAGTCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLRQFFP*SLSLCH
Trigger: GTGGCACAGACTCAATGACCATGGGAAGAACTGGCG...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTACTCTTGACAGGTAATTaGTCCCCAGTTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLLLTGN*SPVLLL
Trigger: GAGCAGCAGAACTGGGGACCAATTACCTGTCAAGAG...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATCATCAGGTCCTCTGTTaGTTTCCAACCATGAATCTT +
Preference number: 4 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHHQVLC*FPTMNL
Trigger: AAGATTCATGGTTGGAAATCAACAGAGGACCTGATG...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACGTAGAAGACAACTGTTaGTGGGACAGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNVEDNC*WDRVQK
Trigger: CTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTAC...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATGGTCCCCAGTTCTGCTaGTCCCAAATACAAATAATT +
Preference number: 4 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHGPQFC*SQIQII
Trigger: AATTATTTGTATTTGGGAGCAGCAGAACTGGGGACC...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTATACATCAGAAGACACTaGGCCCCTAGAAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLYIRRH*APRSKG
Trigger: TCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTA...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACCTTCTGACAAGCAAGTaGTTGGAGAGACAATGGAAG +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNLLTSK*LERQWK
Trigger: CTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAG...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCAAAAATAGATATTGTGATGAGGAAAGTCGGCCGCTaGCCAACGACCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: KSWGSGTTRVLSKIDIVMRKVGR*PTTKLP
Trigger: AGGAAGTTTGGTCGTTGGGCAGCGGCCGACTTTCCT...CATCACAATATCTATTTTTGATAGAACTCGTGTGGTTCCACTTCCCCAAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATAAACTCACATCTCTCTaGCCAGAAGGACTATTTTCT +
Preference number: 4 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHKLTSL*PEGLFS
Trigger: AGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTT...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGACTGAATGCTGGATTGTaGTGGTTTCTGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLTLASGRKKRFLALGCRLNAGL*WFLVGL
Trigger: AAGGCCTACCAGAAACCAGCACAATCCAGCATTCAG...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp CCATGTCCTTCTTGTTTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAACAGAAATATCCGGTGTaGGGGCAGAAGTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PCPSCFHLTPNTSIWKKEQKYPV*GQKCTL
Trigger: CAGCGTGCACTTCTGCCCCCACACCGGATATTTCTG...TTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAAACAAGAAGGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAGAAGACTGGGGGACCTaGGAAGACTGGCTTATTTGT +
Preference number: 4 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLEDWGT*EDWLIC
Trigger: ACAAATAAGCCAGTCTTCCCAGGTCCCCCAGTCTTC...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
3UTR CAA 72 bp CCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTaGTTAACAAGCTCCATACAGTTGAAAGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPNSILLGHLRG*LTSSIQLKDKE
Trigger: CTCTTTATCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAGTTTCTGTAGGCAAATaGACATCTTGGCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLVSVGK*TSWQCS
Trigger: AGAGCATTGCCAAGATGTTCATTTGCCTACAGAAAC...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATACAGTTGAAAGAAGAAGGACTATTTTCTaGGAGAGTAGGCACAGCATC +
Preference number: 4 (lower is better)
Translates to: NPPRSPQRLVNKLHTVERRRTIF*ESRHSI
Trigger: GATGCTGTGCCTACTCTCTCAGAAAATAGTCCTTCT...TCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGTCTTTGGTTGACTaGAAACCAGAACAGGACAGA +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNKSLVD*KPEQDR
Trigger: TCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTT...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACACTAATGGAATTCTTTaGTTCAGGTTCCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNTNGIL*FRFLGE
Trigger: TTCCCCCAGGAACCTGAAGCAAAGAATTCCATTAGT...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAAAGGGATTTATACACGTaGCGCCAGTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKRDLYT*RQFFPW
Trigger: CCATGGGAAGAACTGGCGCCACGTGTATAAATCCCT...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp GCAAAAGAATGTGTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAATGCTGGATTGTGCTaGTTTCTGGTAGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AKECVKCIPPNSILLGHLNAGLC*FLVGLV
Trigger: AACAAGGCCTACCAGAAACCAGCACAATCCAGCATT...GAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCACACATTCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACGTTGATTTCCAACCATaGATCTTGAGTGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNVDFQP*ILSGSV
Trigger: AACACTTCCACTCAAGATTCATGGTTGGAAATCAAC...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAAGACTGGCTTATTTGTaGACTATTCAGACTCATGCT +
Preference number: 4 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLRLAYL*TIQTHA
Trigger: AGCATGAGTCTGAATAGTTCACAAATAAGCCAGTCT...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCATGAATCTTGAGTaGAAGTGTTTCCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: LLTLASGRKKRFLALGCRTMNLE*KCFLGQ
Trigger: TTGTCCCAGGAAACACTTCCACTCAAGATTCATGGT...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCAAAAATAGATATTGTGATGAAAGTATCAATTTCCTaGGAGGAAAGTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KSWGSGTTRVLSKIDIVMKVSIS*EESRPL
Trigger: CAGCGGCCGACTTTCCTCTCAGGAAATTGATACTTT...CATCACAATATCTATTTTTGATAGAACTCGTGTGGTTCCACTTCCCCAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCAAAAATAGATATTGTGATGTCTTCCCATGGTCATTaGGTCTGTGCCACAGCATAT +
Preference number: 4 (lower is better)
Translates to: KSWGSGTTRVLSKIDIVMSSHGH*VCATAY
Trigger: ATATGCTGTGGCACAGACTCAATGACCATGGGAAGA...CATCACAATATCTATTTTTGATAGAACTCGTGTGGTTCCACTTCCCCAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAATCTGGTAGGCCTTGTTaGTTACAATCTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKSGRPC*LQSPSL
Trigger: GAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGA...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp CCATGTCCTTCTTGTTTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAACTAGAAGCAAAGGAGTaGTGCAGCTTGGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PCPSCFHLTPNTSIWKKELEAKE*CSLAVL
Trigger: TAAGACAGCCAAGCTGCATCACTCCTTTGCTTCTAG...TTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAAACAAGAAGGACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAGAATTCCCAGTAGATTaGGGCTATCATTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LLTLASGRKKRFLALGCREFPVD*GYHFPL
Trigger: TAGAGGAAAATGATAGCCTCAATCTACTGGGAATTC...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp TTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTGGGGAAGTCTTTGGTTaGCTGAAAACCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: FHLTPNTSIWKKEKISGPGEVFG*LKTRTG
Trigger: TCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCC...AGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCAAAAATAGATATTGTGATGCTGTCTAGTCCGACATaGCACTTCCCTCTCTTTACA +
Preference number: 4 (lower is better)
Translates to: KSWGSGTTRVLSKIDIVMLSSPT*HFPLFT
Trigger: TGTAAAGAGAGGGAAGTGGCATGTCGGACTAGACAG...CATCACAATATCTATTTTTGATAGAACTCGTGTGGTTCCACTTCCCCAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATACAGTTGAAAGAACAGAGGCCTGGTTATaGAAAGTAGAATCTGACTTT +
Preference number: 4 (lower is better)
Translates to: NPPRSPQRLVNKLHTVERTEAWL*KVESDF
Trigger: AAAGTCAGATTCTACTTTCCATAACCAGGCCTCTGT...TCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTGGGACCTGGGAAGACTaGCTTATTTGTGAACTATTC +
Preference number: 4 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLGTWED*LICELF
Trigger: GAATAGTTCACAAATAAGCCAGTCTTCCCAGGTCCC...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp GCAAAAGAATGTGTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAAGATTTCTGGCCCTTaGTTGCAGAACCTAAAACTT +
Preference number: 4 (lower is better)
Translates to: AKECVKCIPPNSILLGHLKISGP*LQNLKL
Trigger: AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTT...GAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCACACATTCTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATACAGTTGAAAGAAAATCTTTTAGTGTTTaGAGGTTACAGAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: NPPRSPQRLVNKLHTVERKSFSV*RLQNPS
Trigger: AGAGGGGTTCTGTAACCTTCAAACACTAAAAGATTT...TCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAATTTTATCATCCATCTaGATGCTGGATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLILSSI*MLDCAG
Trigger: ACCAGCACAATCCAGCATTCAGATGGATGATAAAAT...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCCCGTGTGGTTGTCTTaGGGATTTTATCATCCATCT +
Preference number: 4 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYPVWLS*GFYHPS
Trigger: AGATGGATGATAAAATCCTCAAGACAACCACACGGG...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAAATTGGTCCCCAGTTCTaGTGCTCCCAAATACAAATA +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKIGPQF*CSQIQI
Trigger: TATTTGTATTTGGGAGCAGCAGAACTGGGGACCAAT...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAAGCAATGTGATGACTTaGTTAGATTTTTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: LLTLASGRKKRFLALGCRSNVMT*LDFSRI
Trigger: TATCCGGGAAAAATCTAAGCAAGTCATCACATTGCT...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTCCTTCTGCAGCTGATTaGTTTTCTAAAGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLPSAAD*FSKGVS
Trigger: GGAAACACCTTTAGAAAAGCAATCAGCTGCAGAAGG...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAGTGGAAGTGTTTCCTaGGACAACATAGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLSGSVS*DNIVSV
Trigger: TACAGAAACTATGTTGTCCCAGGAAACACTTCCACT...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAATGTAAAGATACCATCTaGTCTCTTGTCCAAACTCAC +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKCKDTI*SLVQTH
Trigger: GTGAGTTTGGACAAGAGATCAGATGGTATCTTTACA...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACAAGCTCCATACAGTTaGAAGATAAAGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKQAPYS*KIKSFF
Trigger: GAAGAAGCTCTTTATCTTTCAACTGTATGGAGCTTG...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTAGGGTCGTTAGAAGTTaGTTCCCTGACTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLRVVRS*FPDFYF
Trigger: GAAATAAAAGTCAGGGAAGCAACTTCTAACGACCCT...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTTATCATCCATCTGAATaGTGGATTGTGCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLYHPSE*WIVLVS
Trigger: AGAAACCAGCACAATCCAGCATTCAGATGGATGATA...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTCTTTACACAGCAATaGTTCATCCATCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKLFTQQ*FIHQQC
Trigger: ACATTGCTGATGGATGAACCATTGCTGTGTAAAGAG...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCAAAAATAGATATTGTGATGGAAAACAATATAGAGTaGGAGGTACGCTGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: KSWGSGTTRVLSKIDIVMENNIE*EVRCLV
Trigger: GACTAGACAGCGTACCTCCCACTCTATATTGTTTTC...CATCACAATATCTATTTTTGATAGAACTCGTGTGGTTCCACTTCCCCAAGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATAGGAGTGATGCAGCTTaGCTGTCTTATCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYRSDAA*LSYLHL
Trigger: AAGATGAAGATAAGACAGCCAAGCTGCATCACTCCT...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATCTTATACTTCTTCTCTaGAGCAGAAATATCCGGTGT +
Preference number: 4 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYLILLL*SRNIRC
Trigger: ACACCGGATATTTCTGCTTCAGAGAAGAAGTATAAG...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTCTCTTGTTTCAATCCTaGCTTGCACACATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLLLFQS*LAHISF
Trigger: AAAAGAAATGTGTGCAAGGCAGGATTGAAACAAGAG...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATGTTCTTGGATCACTGTaGTCAGATCTTCATGTAATC +
Preference number: 4 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYVLGSL*SDLHVI
Trigger: GATTACATGAAGATCTGAGCACAGTGATCCAAGAAC...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CCA 90 bp ATCCAAAAGCTCTTGAATAGTCATTTGCAGTTTGAGGTCTTACCACAATTTTCACATCCATCTGAATGCTaGATTGTGCTGGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IQKLLNSHLQFEVLPQFSHPSEC*IVLVSG
Trigger: ACCAGAAACCAGCACAATCCAGCATTCAGATGGATG...TGAAAATTGTGGTAAGACCTCAAACTGCAAATGACTATTCAAGAGCTTTTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR TCA 90 bp ATCCAAAAGCTCTTGAATAGTCATTTGCAGTTTGAGGTCTTACCACAATTTTCACCCTCTCTGCAATGCTaGATAACTTTCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: IQKLLNSHLQFEVLPQFSPSLQC*ITFFDP
Trigger: TGGATCAAAGAAAGTTATTCAGCATTGCAGAGAGGG...TGAAAATTGTGGTAAGACCTCAAACTGCAAATGACTATTCAAGAGCTTTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR GCA 90 bp CCATGTCCTTCTTGTTTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAAGACAGTAAAAACATTTaGCCCATGTCCTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PCPSCFHLTPNTSIWKKEDSKNI*PMSFLF
Trigger: AAACAAGAAGGACATGGGGCAAATGTTTTTACTGTC...TTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAAACAAGAAGGACATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 90 bp GGCTCAAGGGCCCAGGCCGGTCCCCACTTCCGCTTCCTCACTTTCTaGCCTGGTGCAGTTCCTGTCAGGGCGTCAAGCAAGATGGTTGCA +
Preference number: 5 (lower is better)
Translates to: GSRAQAGPHFRFLTF*PGAVPVRASSKMVA
Trigger: TGCAACCATCTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCGGCCTGGGCCCTTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS GCA 90 bp GGCCCAGGCCGGTCCCCACTTCCGCTTCCTCACTTTCTGGCCTGGTaGAGTTCCTGTCAGGGCGTCAAGCAAGATGGTTGCAGATACCTG +
Preference number: 5 (lower is better)
Translates to: GPGRSPLPLPHFLAW*SSCQGVKQDGCRYL
Trigger: CAGGTATCTGCAACCATCTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCGGCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS CCA 90 bp AAGGGCCCAGGCCGGTCCCCACTTCCGCTTCCTCACTTTCTGGCCTaGTGCAGTTCCTGTCAGGGCGTCAAGCAAGATGGTTGCAGATAC +
Preference number: 5 (lower is better)
Translates to: KGPGRSPLPLPHFLA*CSSCQGVKQDGCRY
Trigger: GTATCTGCAACCATCTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCGGCCTGGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS TCA 90 bp AAACGAGATGCTTTGGAAAGAATTTTGAAAATGGCGGGTGGAGGCTaGGCAAGAATCAACTTTCTGTGGGCAGGGCCTTTCCTCGGCATC +
Preference number: 5 (lower is better)
Translates to: KRDALERILKMAGGG*ARINFLWAGPFLGI
Trigger: GATGCCGAGGAAAGGCCCTGCCCACAGAAAGTTGATTCTTGCTCAGCCTCCACCCGCCATTTTCAAAATTCTTTCCAAAGCATCTCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS-3UTR CAA 90 bp GCAAAAGAATGTGTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCCTCCCTCAGAAGCAGTaGAAACCCGTGTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: AKECVKCIPPNSILLGHLLPQKQ*KPVWLS
Trigger: AGACAACCACACGGGTTTCAACTGCTTCTGAGGGAG...GAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCACACATTCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 90 bp ACGCTGTCTAGTCCGACATGCCACTTCCCTCTCTTTACACAGCAATaGTTCATCCATCAGCAATGTGATGACTTGCTTAGATTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: TLSSPTCHFPLFTQQ*FIHQQCDDLLRFFP
Trigger: CGGGAAAAATCTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGACAGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACTTCTTCCCATGGTCATaGAGTCTGTGCCACAGCATA +
Preference number: 5 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNFFPWS*SLCHSI
Trigger: TATGCTGTGGCACAGACTCAATGACCATGGGAAGAA...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATACAGTTGAAAGACAATGGAAGGAGGTGTaGCTAGTAAAGGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: NPPRSPQRLVNKLHTVERQWKEV*LVKAAL
Trigger: CAGAGCTGCCTTTACTAGCAACACCTCCTTCCATTG...TCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp CTGCACCCGAAAGATTACAAACTTCTTCTGCTTCTGACAAGCAAGTaGTTGGAGAGACAATGGAAGGAGGTGTTGCTAGTAAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LHPKDYKLLLLLTSK*LERQWKEVLLVKAA
Trigger: AGCTGCCTTTACTAGCAACACCTCCTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTTGTAATCTTTCGGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp TTGGCTGTCTTATCTTCATCTTTAAAGGAGGTAGAAGACAACTGTTaGTGGGACAGAGTCCAGAAGGAAGGTCCGGCCAGAATTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LAVLSSSLKEVEDNC*WDRVQKEGPARIGD
Trigger: ATCACCAATTCTGGCCGGACCTTCCTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp ATGGAATTCTTTGCTTCAGGTTCCTGGGGGAAGTCTTTGGTTGACTaGAAACCAGAACAGGACAGAGGGATGAACTGGTCTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: MEFFASGSWGKSLVD*KPEQDRGMNWSTFW
Trigger: CCAAAATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCCAGGAACCTGAAGCAAAGAATTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACCCGTGTGGTTGTCTaGAGGATTTTATCATCCATC +
Preference number: 5 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLTRVVV*RILSSI
Trigger: GATGGATGATAAAATCCTCAAGACAACCACACGGGT...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp TTTTCCTCTACATCAGAAGACACTGGGCCCCTAGAAGCAAAGGAGTaGTGCAGCTTGGCTGTCTTATCTTCATCTTTAAAGGAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: FSSTSEDTGPLEAKE*CSLAVLSSSLKEVE
Trigger: TTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAAGCTGCATCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp ACTAATGGAATTCTTTGCTTCAGGTTCCTGGGGGAAGTCTTTGGTTaGCTGAAAACCAGAACAGGACAGAGGGATGAACTGGTCTACATT +
Preference number: 5 (lower is better)
Translates to: TNGILCFRFLGEVFG*LKTRTGQRDELVYI
Trigger: AATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCCAGGAACCTGAAGCAAAGAATTCCATTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 90 bp TTTAGAAAACAATATAGAGTGGGAGGTACGCTGTCTAGTCCGACATaGCACTTCCCTCTCTTTACACAGCAATGGTTCATCCATCAGCAA +
Preference number: 5 (lower is better)
Translates to: FRKQYRVGGTLSSPT*HFPLFTQQWFIHQQ
Trigger: TTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGACAGCGTACCTCCCACTCTATATTGTTTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 90 bp GGTTGTCTTGAGGATTTTATCATCCATCTGAATGCTGGATTGTGCTaGTTTCTGGTAGGCCTTGTTGATTACAATCTCCTTCACTCGGTC +
Preference number: 5 (lower is better)
Translates to: GCLEDFIIHLNAGLC*FLVGLVDYNLLHSV
Trigger: GACCGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTCAAGACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACGGGTTTATAAAACTCTaGACAGGTAATTGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNGFIKL*TGNWSP
Trigger: TGGGGACCAATTACCTGTCAAGAGTTTTATAAACCC...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GTGAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTACACAAAGTTTTTCACTaGTCTCCTGAACGCCATAAG +
Preference number: 5 (lower is better)
Translates to: VKCIPPNSILLGHLRGLLHKVFH*SPERHK
Trigger: CTTATGGCGTTCAGGAGACAAGTGAAAAACTTTGTG...TAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACATACCATCTGATCTCTaGTCCAAACTCACATCTCTC +
Preference number: 5 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNIPSDL*SKLTSL
Trigger: GAGAGATGTGAGTTTGGACAAGAGATCAGATGGTAT...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp ACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACATCTGAATGCTGGATaGTGCTGGTTTCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TSIWKKEKISGPWLQNLKHLNAG*CWFLVG
Trigger: GCCTACCAGAAACCAGCACAATCCAGCATTCAGATG...TTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp ACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATCAGAATCAGAGTTATTaGGAAGAATTCCCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: TPKLNPPRSPQRLVNKLHQNQSY*EEFPVD
Trigger: ATCTACTGGGAATTCTTCCAAATAACTCTGATTCTG...ATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp GAAATGTATACCCCCAAACTCAATCCTCCTAGGTCACCTCAGAGGCTTGTTAACGATGACATTAAGTTCTaGGATCACTGTGCTCAGATC +
Preference number: 5 (lower is better)
Translates to: EMYTPKLNPPRSPQRLVNDDIKF*DHCAQI
Trigger: GATCTGAGCACAGTGATCCAAGAACTTAATGTCATC...GTTAACAAGCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 90 bp TTTGTAAAGATACCATCTGATCTCTTGTCCAAACTCACATCTCTCTaGCCAGAAGGACTATTTTCTGAGAGAGTAGGCACAGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: FVKIPSDLLSKLTSL*PEGLFSERVGTASA
Trigger: TGCAGATGCTGTGCCTACTCTCTCAGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTTGGACAAGAGATCAGATGGTATCTTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 90 bp TGTGGTTGTCTTGAGGATTTTATCATCCATCTGAATGCTGGATTGTaGTGGTTTCTGGTAGGCCTTGTTGATTACAATCTCCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: CGCLEDFIIHLNAGL*WFLVGLVDYNLLHS
Trigger: CGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTCAAGACAACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGACAGCAATGTGATGACTaGCTTAGATTTTTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: LLTLASGRKKRFLALGCRQQCDD*LRFFPD
Trigger: ATCCGGGAAAAATCTAAGCAAGTCATCACATTGCTG...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTGGTAGAAGACAACTGTaGATGGGACAGAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLGRRQL*MGQSPE
Trigger: TTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACC...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATGGTCACCTCAGAGGCTaGTTAACAAGCTCCATACAG +
Preference number: 5 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYGHLRG*LTSSIQ
Trigger: CTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACC...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 90 bp AGTGAGTTACTTGAACCAAGTTGTCTTTTAGAAAACAATATAGAGTaGGAGGTACGCTGTCTAGTCCGACATGCCACTTCCCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: SELLEPSCLLENNIE*EVRCLVRHATSLSL
Trigger: TAAAGAGAGGGAAGTGGCATGTCGGACTAGACAGCGTACCTCCCACTCTATATTGTTTTCTAAAAGACAACTTGGTTCAAGTAACTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTATCATCAGGTCCTCTGTaGATTTCCAACCATGAATCT +
Preference number: 5 (lower is better)
Translates to: NTSIWKKEKISGPWLQNLSSGPL*ISNHES
Trigger: AGATTCATGGTTGGAAATCAACAGAGGACCTGATGA...TAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AATCCTCCTAGGTCACCTCAGAGGCTTGTTAACAAGCTCCATACAGTTGAAAGAAGAATTCCCAGTAGATaGAGGCTATCATTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NPPRSPQRLVNKLHTVERRIPSR*RLSFSS
Trigger: AGAGGAAAATGATAGCCTCAATCTACTGGGAATTCT...TCTTTCAACTGTATGGAGCTTGTTAACAAGCCTCTGAGGTGACCTAGGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATATCTTGGCAATGCTCTaGTTTCAATCCTGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYILAML*FQSCLA
Trigger: TGCAAGGCAGGATTGAAACAAGAGCATTGCCAAGAT...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp ATCCAAAAGCTCTTGAATAGTCATTTGCAGTTTGAGGTCTTACCACAATTTTCAGGGGGAAGTCTTTGGTaGACTGAAAACCAGAACAGG +
Preference number: 5 (lower is better)
Translates to: IQKLLNSHLQFEVLPQFSGGSLW*TENQNR
Trigger: CCTGTTCTGGTTTTCAGTCAACCAAAGACTTCCCCC...TGAAAATTGTGGTAAGACCTCAAACTGCAAATGACTATTCAAGAGCTTTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp CTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACAAGCTCCATACAGTaGAAAGATAAAGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LLTLASGRKKRFLALGCRTSSIQ*KDKELL
Trigger: AAGAAGCTCTTTATCTTTCAACTGTATGGAGCTTGT...TCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp CCATGTCCTTCTTGTTTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAAATTTCTGGCCCTTGGTaGCAGAACCTAAAACTTGCA +
Preference number: 5 (lower is better)
Translates to: PCPSCFHLTPNTSIWKKEISGPW*QNLKLA
Trigger: TGCAAGTTTTAGGTTCTGCAACCAAGGGCCAGAAAT...TTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAAACAAGAAGGACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 90 bp TGTTTCCAAGAGGTTTTCTGTGACAGTATTTGTAAAGATACCATCTaGTCTCTTGTCCAAACTCACATCTCTCTGCCCAGAAGGACTATT +
Preference number: 5 (lower is better)
Translates to: CFQEVFCDSICKDTI*SLVQTHISLPRRTI
Trigger: AATAGTCCTTCTGGGCAGAGAGATGTGAGTTTGGACAAGAGATCAGATGGTATCTTTACAAATACTGTCACAGAAAACCTCTTGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 90 bp TTCAGACTCATGCTCATCAAGATGTTATTGATGACATTAAGTTCTTaGATCACTGTGCTCAGATCTTCATGTAATCTAGCGATCGCACGT +
Preference number: 5 (lower is better)
Translates to: FRLMLIKMLLMTLSS*ITVLRSSCNLAIAR
Trigger: ACGTGCGATCGCTAGATTACATGAAGATCTGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AATTTATACAATGCTAACGTAAGTCTTGGGGAAGTGGAACCACACGAGTTCTATAAAGATTTCTGGCCCTaGGTTGCAGAACCTAAAACT +
Preference number: 5 (lower is better)
Translates to: NLYNANVSLGEVEPHEFYKDFWP*VAEPKT
Trigger: AGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTT...ATAGAACTCGTGTGGTTCCACTTCCCCAAGACTTACGTTAGCATTGTATAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp AGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTTGGTTGCAGAACCTAAAACTTGAGAGAGAAATTGTGTaGAAAGTCAAGTCACTGATA +
Preference number: 5 (lower is better)
Translates to: SIWKKEKISGPWLQNLKLEREIV*KVKSLI
Trigger: TATCAGTGACTTGACTTTCAACACAATTTCTCTCTC...AAGTTTTAGGTTCTGCAACCAAGGGCCAGAAATCTTTTCTTTCTTCCAGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS-3UTR CAA 90 bp TTCCATTTAACTCCTAACACTAGCATCTGGAAGAAAGAAAAGATTTCTGGCCCTAGGCAAATGAACATCTaGGCAATGCTCTTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: FHLTPNTSIWKKEKISGPRQMNI*AMLLFQ
Trigger: TTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCT...AGGGCCAGAAATCTTTTCTTTCTTCCAGATGCTAGTGTTAGGAGTTAAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp GCCCAGGCCGGTCCCCACTTCCGCTTCCTCACTTTCTaGCCTGGTGCAGTTCCTGTCAGGGCGTCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: AQAGPHFRFLTF*PGAVPVRASSK
Trigger: CTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCGGCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS CCA 72 bp GGCCGGTCCCCACTTCCGCTTCCTCACTTTCTGGCCTaGTGCAGTTCCTGTCAGGGCGTCAAGCAAGATGGT +
Preference number: 6 (lower is better)
Translates to: GRSPLPLPHFLA*CSSCQGVKQDG
Trigger: ACCATCTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS GCA 72 bp CGGTCCCCACTTCCGCTTCCTCACTTTCTGGCCTGGTaGAGTTCCTGTCAGGGCGTCAAGCAAGATGGTTGC +
Preference number: 6 (lower is better)
Translates to: RSPLPLPHFLAW*SSCQGVKQDGC
Trigger: GCAACCATCTTGCTTGACGCCCTGACAGGAACTGCACCAGGCCAGAAAGTGAGGAAGCGGAAGTGGGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS GCA 72 bp GACCTCAGGAAAGCCTCTGAGAGGAAAGTCGGCCGCTaGCCAACGACCAAACTTCCTCTCCCCAGGATATTC +
Preference number: 6 (lower is better)
Translates to: DLRKASERKVGR*PTTKLPLPRIF
Trigger: GAATATCCTGGGGAGAGGAAGTTTGGTCGTTGGGCAGCGGCCGACTTTCCTCTCAGAGGCTTTCCTGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS CCA 72 bp GAGCTCCCCTCAGAAGACTGGGGGACCTGGGAAGACTaGCTTATTTGTGAACTATTCAGACTCATGCTCATC +
Preference number: 6 (lower is better)
Translates to: ELPSEDWGTWED*LICELFRLMLI
Trigger: GATGAGCATGAGTCTGAATAGTTCACAAATAAGCCAGTCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 72 bp TCTCTGAAGCAGAAATATCCGGTGTGGGGGCAGAAGTaGACGCTGTCAGTGAGTTACTTGAACCAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: SLKQKYPVWGQK*TLSVSYLNQVV
Trigger: GACAACTTGGTTCAAGTAACTCACTGACAGCGTGCACTTCTGCCCCCACACCGGATATTTCTGCTTCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp ACAACTGTTGATGGGACAGAGTCCAGAAGGAAGGTCCGGCCAGAATaGGTGATAAGAGATGAGCTGACTTCTCTGGAGAGGCTAAATCAG +
Preference number: 6 (lower is better)
Translates to: TTVDGTESRRKVRPE*VIRDELTSLERLNQ
Trigger: CTGATTTAGCCTCTCCAGAGAAGTCAGCTCATCTCTTATCACCAATTCTGGCCGGACCTTCCTTCTGGACTCTGTCCCATCAACAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 72 bp GCTTTGGAAAGAATTTTGAAAATGGCGGGTGGAGGCTaGGCAAGAATCAACTTTCTGTGGGCAGGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: ALERILKMAGGG*ARINFLWAGPF
Trigger: GAAAGGCCCTGCCCACAGAAAGTTGATTCTTGCTCAGCCTCCACCCGCCATTTTCAAAATTCTTTCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS GCA 72 bp CAATATAGAGTGGGAGGTACGCTGTCTAGTCCGACATaGCACTTCCCTCTCTTTACACAGCAATGGTTCATC +
Preference number: 6 (lower is better)
Translates to: QYRVGGTLSSPT*HFPLFTQQWFI
Trigger: GATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACTAGACAGCGTACCTCCCACTCTATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp GCTTATACTTCTTCTCTGAAGCAGAAATATCCGGTGTaGGGGCAGAAGTGCACGCTGTCAGTGAGTTACTTG +
Preference number: 6 (lower is better)
Translates to: AYTSSLKQKYPV*GQKCTLSVSYL
Trigger: CAAGTAACTCACTGACAGCGTGCACTTCTGCCCCCACACCGGATATTTCTGCTTCAGAGAAGAAGTATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp ATTGAGGCTATCATTTTCCTCTACATCAGAAGACACTaGGCCCCTAGAAGCAAAGGAGTGATGCAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: IEAIIFLYIRRH*APRSKGVMQLG
Trigger: GCCAAGCTGCATCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp ACGAGATGCTTTGGAAAGAATTTTGAAAATGGCGGGTaGAGGCTGAGCAAGAATCAACTTTCTGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: TRCFGKNFENGG*RLSKNQLSVGR
Trigger: CCTGCCCACAGAAAGTTGATTCTTGCTCAGCCTCCACCCGCCATTTTCAAAATTCTTTCCAAAGCATCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490326.1
CDS TCA 72 bp CTCCCTCAGAAGCAGTTGAAACCCGTGTGGTTGTCTTaGGGATTTTATCATCCATCTGAATGCTGGATTGTG +
Preference number: 6 (lower is better)
Translates to: LPQKQLKPVWLS*GFYHPSECWIV
Trigger: CACAATCCAGCATTCAGATGGATGATAAAATCCTCAAGACAACCACACGGGTTTCAACTGCTTCTGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp AGTCCGACATGCCACTTCCCTCTCTTTACACAGCAATaGTTCATCCATCAGCAATGTGATGACTTGCTTAGA +
Preference number: 6 (lower is better)
Translates to: SPTCHFPLFTQQ*FIHQQCDDLLR
Trigger: TCTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGGGAAGTGGCATGTCGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp CCGTGTGGTTGTCTTGAGGATTTTATCATCCATCTGAATGCTGGATaGTGCTGGTTTCTGGTAGGCCTTGTTGATTACAATCTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: PCGCLEDFIIHLNAG*CWFLVGLVDYNLLH
Trigger: GTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTCAAGACAACCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 72 bp ATACCATCTGATCTCTTGTCCAAACTCACATCTCTCTaGCCAGAAGGACTATTTTCTGAGAGAGTAGGCACA +
Preference number: 6 (lower is better)
Translates to: IPSDLLSKLTSL*PEGLFSERVGT
Trigger: TGTGCCTACTCTCTCAGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTTGGACAAGAGATCAGATGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 72 bp AGTGTTTCCTGGGACAACATAGTTTCTGTAGGCAAATaGACATCTTGGCAATGCTCTTGTTTCAATCCTGCC +
Preference number: 6 (lower is better)
Translates to: SVSWDNIVSVGK*TSWQCSCFNPA
Trigger: GGCAGGATTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCTACAGAAACTATGTTGTCCCAGGAAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 72 bp TGGAATAACAGTTTATGTCACGGGTTTATAAAACTCTaGACAGGTAATTGGTCCCCAGTTCTGCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: WNNSLCHGFIKL*TGNWSPVLLLP
Trigger: TGGGAGCAGCAGAACTGGGGACCAATTACCTGTCAAGAGTTTTATAAACCCGTGACATAAACTGTTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS GCA 72 bp CTTGAGGATTTTATCATCCATCTGAATGCTGGATTGTaGTGGTTTCTGGTAGGCCTTGTTGATTACAATCTC +
Preference number: 6 (lower is better)
Translates to: LEDFIIHLNAGL*WFLVGLVDYNL
Trigger: GAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp GAGGATTTTATCATCCATCTGAATGCTGGATTGTGCTaGTTTCTGGTAGGCCTTGTTGATTACAATCTCCTT +
Preference number: 6 (lower is better)
Translates to: EDFIIHLNAGLC*FLVGLVDYNLL
Trigger: AAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp CCTCTCTTTACACAGCAATGGTTCATCCATCAGCAATGTGATGACTaGCTTAGATTTTTCCCGGATATAATAACCTTGGTCTTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: PLFTQQWFIHQQCDD*LRFFPDIITLVFSS
Trigger: GCTGGAAAAGACCAAGGTTATTATATCCGGGAAAAATCTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp AAGTGTTTCCTGGGACAACATAGTTTCTGTAGGCAAATGAACATCTaGGCAATGCTCTTGTTTCAATCCTGCCTTGCACACATTTCTTTT +
Preference number: 6 (lower is better)
Translates to: KCFLGQHSFCRQMNI*AMLLFQSCLAHISF
Trigger: AAAAGAAATGTGTGCAAGGCAGGATTGAAACAAGAGCATTGCCAAGATGTTCATTTGCCTACAGAAACTATGTTGTCCCAGGAAACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 72 bp AAAGATTACAAACTTCTTCTGCTTCTGACAAGCAAGTaGTTGGAGAGACAATGGAAGGAGGTGTTGCTAGTA +
Preference number: 6 (lower is better)
Translates to: KDYKLLLLLTSK*LERQWKEVLLV
Trigger: TACTAGCAACACCTCCTTCCATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTTGTAATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 72 bp ACACAGCAATGGTTCATCCATCAGCAATGTGATGACTaGCTTAGATTTTTCCCGGATATAATAACCTTGGTC +
Preference number: 6 (lower is better)
Translates to: TQQWFIHQQCDD*LRFFPDIITLV
Trigger: GACCAAGGTTATTATATCCGGGAAAAATCTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 72 bp TGTCTTGAGGATTTTATCATCCATCTGAATGCTGGATaGTGCTGGTTTCTGGTAGGCCTTGTTGATTACAAT +
Preference number: 6 (lower is better)
Translates to: CLEDFIIHLNAG*CWFLVGLVDYN
Trigger: ATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGATGATAAAATCCTCAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp AGTCTGTGCCACAGCATATTCATAATCTCTGAGAGAGAAATTGTGTaGAAAGTCAAGTCACTGATATCTAACATCAGAGAACTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: SLCHSIFIISEREIV*KVKSLISNIRELEG
Trigger: TCCCTCTAGTTCTCTGATGTTAGATATCAGTGACTTGACTTTCAACACAATTTCTCTCTCAGAGATTATGAATATGCTGTGGCACAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS TCA 72 bp CAGAATCAGAGTTATTTGGAAGAATTCCCAGTAGATTaGGGCTATCATTTTCCTCTACATCAGAAGACACTG +
Preference number: 6 (lower is better)
Translates to: QNQSYLEEFPVD*GYHFPLHQKTL
Trigger: CAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTACTGGGAATTCTTCCAAATAACTCTGATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp TTATGTCACGGGTTTATAAAACTCTTGACAGGTAATTaGTCCCCAGTTCTGCTGCTCCCAAATACAAATAAT +
Preference number: 6 (lower is better)
Translates to: LCHGFIKLLTGN*SPVLLLPNTNN
Trigger: ATTATTTGTATTTGGGAGCAGCAGAACTGGGGACCAATTACCTGTCAAGAGTTTTATAAACCCGTGACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 72 bp GCAGAATCAGAGTTATTTGGAAGAATTCCCAGTAGATaGAGGCTATCATTTTCCTCTACATCAGAAGACACT +
Preference number: 6 (lower is better)
Translates to: AESELFGRIPSR*RLSFSSTSEDT
Trigger: AGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTACTGGGAATTCTTCCAAATAACTCTGATTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CCA 72 bp ATGCTCATCAAGATGTTATTGATGACATTAAGTTCTTaGATCACTGTGCTCAGATCTTCATGTAATCTAGCG +
Preference number: 6 (lower is better)
Translates to: MLIKMLLMTLSS*ITVLRSSCNLA
Trigger: CGCTAGATTACATGAAGATCTGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 72 bp TGTGAACTATTCAGACTCATGCTCATCAAGATGTTATaGATGACATTAAGTTCTTGGATCACTGTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: CELFRLMLIKML*MTLSSWITVLR
Trigger: TCTGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAATAGTTCACA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7
CDS CAA 90 bp TGGCTTATTTGTGAACTATTCAGACTCATGCTCATCAAGATGTTATaGATGACATTAAGTTCTTGGATCACTGTGCTCAGATCTTCATGT +
Preference number: 6 (lower is better)
Translates to: WLICELFRLMLIKML*MTLSSWITVLRSSC
Trigger: ACATGAAGATCTGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGAGTCTGAATAGTTCACAAATAAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325157.7