Pregenerated sensors for ENSA (Homo sapiens)
Ensembl gene IDs: ENSG00000143420Ensembl transcript IDs: ENST00000271690.12, ENST00000354702.3, ENST00000356527.9, ENST00000362052.7, ENST00000369014.10, ENST00000369016.8, ENST00000509582.5, ENST00000513281.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTGCACAATCCTAAAACCTCCAACATTCAAACAGGCAAATGCCTaGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTC | + |
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Preference number: 1 (lower is better) Translates to: KCTILKPPTFKQANA*GQSAFQFLTSFPHF Trigger: GAAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCATTTGCCTGTTTGAATGTTGGAGGTTTTAGGATTGTGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| 3UTR-3UTR CCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTAGCACAGGACCCGGGTaGGGCAGGGAGGGGAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLSTGPG*GREGKR Trigger: ACGCTTCCCCTCCCTGCCCCACCCGGGTCCTGTGCT...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| 3UTR-3UTR GCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTACAGGAAAGGGCTTCTaGCTCTCCAGCCCACACCCG | + |
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Preference number: 2 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLTGKGF*LSSPHP Trigger: CGGGTGTGGGCTGGAGAGGCAGAAGCCCTTTCCTGT...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| 3UTR-3UTR CCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTAGGGGCTCCATGTGCTaGGACACCAACAGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLRGSMC*DTNRKG Trigger: CCCTTTCCTGTTGGTGTCCCAGCACATGGAGCCCCT...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| 3UTR-3UTR GCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTCCAAGGGGCTCCATGTaGTGGGACACCAACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLPRGSM*WDTNRK Trigger: TTTCCTGTTGGTGTCCCAGCACATGGAGCCCCTTGG...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTAAAAAGTGCACAATCCTAAAACCTCCAACATTCAAACAGGCAAATGCCAAATCAGGAGGGAATTaGTACCACATCAGGGATTTA | + |
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Preference number: 2 (lower is better) Translates to: MLKKCTILKPPTFKQANAKSGGN*YHIRDL Trigger: TAAATCCCTGATGTGGTATCAATTCCCTCCTGATTT...GGCATTTGCCTGTTTGAATGTTGGAGGTTTTAGGATTGTGCACTTTTTAAGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| 3UTR TCA 72 bp | CTGCTGGGACTGAGTAGAGTGAGAACCCAGATATCTTaGCTCCTAAACCAGTGCTCGTCCCACTATCCCATG | + |
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Preference number: 3 (lower is better) Translates to: LLGLSRVRTQIS*LLNQCSSHYPM Trigger: CATGGGATAGTGGGACGAGCACTGGTTTAGGAGTCAAGATATCTGGGTTCTCACTCTACTCAGTCCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271690.12 ENST00000356527.9 ENST00000513281.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTCCCCACGAAATCAGGAGGGAATaGATACCACATCAGGGATTT | + |
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Preference number: 3 (lower is better) Translates to: CLGAVCISVSNIFPSFPHEIRRE*IPHQGF Trigger: AAATCCCTGATGTGGTATCAATTCCCTCCTGATTTC...GTGGGGAAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| 3UTR CCA 72 bp | ATCCTAAAACCTCCAACATTCAAACAGGCAAATGCCTaGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: ILKPPTFKQANA*GQSAFQFLTSF Trigger: GAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCATTTGCCTGTTTGAATGTTGGAGGTTTTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| 3UTR TCA 72 bp | AGTTTCTTTTATCTGACACCAGGTCTCCAACCACACTaGAACAAGGCATTTATCTACAGAGCTCAACTAGAA | + |
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Preference number: 3 (lower is better) Translates to: SFFYLTPGLQPH*NKAFIYRAQLE Trigger: TTCTAGTTGAGCTCTGTAGATAAATGCCTTGTTTCAGTGTGGTTGGAGACCTGGTGTCAGATAAAAGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR GCA 90 bp | TGCATACCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCTTCTCCTGCGTGTCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CIPCDPATFNIYRREARCFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGACACGCAGGAGAA...GCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGGTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTGGCTCCGGGAGGCGGAGGTTaGATTGAGCCAAGATTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PVTQQLSIFTVERPGAVAPGGGG*IEPRLR Trigger: ACGCAATCTTGGCTCAATGCAACCTCCGCCTCCCGG...AGCCACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGTCAAAGTACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTAGCACAGGACCCGGGTaGGGCAGGGAGGGGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: PESKYFCISSAQRSTLQCSTGPG*GREGKR Trigger: ACGCTTCCCCTCCCTGCCCCACCCGGGTCCTGTGCT...ACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGTACTTTGACTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR GCA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCTTCTCCTGCGTGTCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLNQCSSHYPMILSKATCFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGACACGCAGGAGAA...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271690.12 ENST00000356527.9 |
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| CDS-3UTR TCA 90 bp | ATACCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTAGGCGGAGGTTGCATTaGGCCAAGATTGCGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: IPCDPATFNIYRREARCSRRRLH*AKIASL Trigger: CAGTGACGCAATCTTGGCTCAATGCAACCTCCGCCT...ACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTGGCTAGTAAGCAGAGATCATaGCATTGCACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVTQQLSIFTVERPGAVASKQRS*HCTPAW Trigger: CCAGGCTGGAGTGCAATGGCATGATCTCTGCTTACT...AGCCACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | TGCATACCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCCCAGGAGGCAGAGGTTaGAGTAAGCAGAGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: CIPCDPATFNIYRREARCPGGRG*SKQRSC Trigger: GCATGATCTCTGCTTACTGCAACCTCTGCCTCCTGG...GCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGGTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | TGCATACCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCGCATTGAGCCAAGATTaGGTCACTGTACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CIPCDPATFNIYRREARCALSQD*VTVLQP Trigger: AGGCTGGAGTACAGTGACGCAATCTTGGCTCAATGC...GCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGGTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTTTCTCCTGCGTGTCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGACACGCAGGAGAA...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR GCA 90 bp | CCTACATGGGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTTTCTCCTGCGTGTCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTWEIRRELIPHQGFTLIFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGACACGCAGGAGAA...AATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCCCATGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR GCA 90 bp | CCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTGGCGAGTCAAAGTACTTTTaGATTTCATCCGCACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PCDPATFNIYRREARCSGESKYF*ISSAQR Trigger: TCTCTGTGCGGATGAAATGCAAAAGTACTTTGACTC...GCCACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR GCA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCGAGGGTAAGAGACTATaGCCCATACCCCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLNQCSSHYPMILSKATCEGKRL*PIPLSG Trigger: TCCAGAAAGGGGTATGGGGCATAGTCTCTTACCCTC...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356527.9 |
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| CDS-3UTR GCA 90 bp | TGCCTGGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTCCCCACCCCCACACACCCAAATaGTCCAATTTAGGCCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: CLGAVCISVSNIFPSFPHPHTPK*SNLGLN Trigger: ATTAAGGCCTAAATTGGAGCATTTGGGTGTGTGGGG...GTGGGGAAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR TCA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCAGAACCCAGATATCTTaGCTCCTAAACCAGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LLNQCSSHYPMILSKATCRTQIS*LLNQCS Trigger: CGAGCACTGGTTTAGGAGTCAAGATATCTGGGTTCT...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271690.12 ENST00000356527.9 ENST00000513281.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGTCAAAGTACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTGAGGGTAAGAGACTATaGCCCATACCCCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PESKYFCISSAQRSTLQCEGKRL*PIPLSG Trigger: TCCAGAAAGGGGTATGGGGCATAGTCTCTTACCCTC...ACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGTACTTTGACTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR GCA 90 bp | GGCAAATGCCTGGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTTGCCTGGGGGCAGTCTaGATTTCAGTTTCTAACATC | + |
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Preference number: 4 (lower is better) Translates to: GKCLGAVCISVSNIFPSFCLGAV*ISVSNI Trigger: GATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCA...AAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCATTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR GCA 90 bp | ACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTAATGATTTATAATTTCTCCTGCGTGTCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TFAFHPHREAHSNVMIYNFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGACACGCAGGAGAA...ATTATAAATCATTACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR CCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTCAGCATCATTCAACTTaGCCACCCGCAAGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLQHHST*PPASLL Trigger: CAGCAAGCTTGCGGGTGGCCAAGTTGAATGATGCTG...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR GCA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCATACCTTCTTTCTCCTaGGTGTCCTCTACAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: LLNQCSSHYPMILSKATCIPSFS*VSSTNQ Trigger: TTGGTTTGTAGAGGACACGCAGGAGAAAGAAGGTAT...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513281.5 |
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| CDS-3UTR GCA 90 bp | GCCTGGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTCCCCACACTAATGCTTAAAAAGTaGACAATCCTAAAACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AWGQSAFQFLTSFPHFPTLMLKK*TILKPP Trigger: TGGAGGTTTTAGGATTGTGCACTTTTTAAGCATTAG...TGTGGGGAAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR TCA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCTCCAGAGAGGCTAAATaGCTTAATCAAGGTTATACA | + |
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Preference number: 4 (lower is better) Translates to: LLNQCSSHYPMILSKATCSREAK*LNQGYT Trigger: TGTATAACCTTGATTAAGTCATTTAGCCTCTCTGGA...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271690.12 ENST00000356527.9 ENST00000513281.5 |
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| CDS-3UTR TCA 90 bp | GGCAAATGCCTGGGGGCAGTCTGCATTTCAGTTTCTAACATCTTTCCCTCATTTGGTTTGATCTTCTTCTaGAATGATGCATCCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GKCLGAVCISVSNIFPSFGLIFF*NDASQN Trigger: ATTTTGGGATGCATCATTTCAGAAGAAGATCAAACC...AAATGAGGGAAAGATGTTAGAAACTGAAATGCAGACTGCCCCCAGGCATTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR TCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTGGTCTCCAACCACACTaGAACAAGGCATTTATCTAC | + |
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Preference number: 4 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLGLQPH*NKAFIY Trigger: GTAGATAAATGCCTTGTTTCAGTGTGGTTGGAGACC...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGTCAAAGTACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTGAGTCAAAGTACTTTTaGATTTCATCCGCACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PESKYFCISSAQRSTLQCESKYF*ISSAQR Trigger: TCTCTGTGCGGATGAAATGCAAAAGTACTTTGACTC...ACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGTACTTTGACTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR GCA 90 bp | ATGGGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTTGACTGAGGGTAAGAGACTATaGCCCATACCCCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MGNQEGIDTTSGIYINLTEGKRL*PIPLSG Trigger: TCCAGAAAGGGGTATGGGGCATAGTCTCTTACCCTC...AGTCAAATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR GCA 90 bp | CCTACATGGGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTATTCAAACAGGCAAATaGCTGGGGGCAGTCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: PTWEIRRELIPHQGFTLIIQTGK*LGAVCI Trigger: AATGCAGACTGCCCCCAGGCATTTGCCTGTTTGAAT...AATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCCCATGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR CCA 90 bp | ACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTAATGATTTATAATCAGCATCATTCAACTTaGCCACCCGCAAGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TFAFHPHREAHSNVMIYNQHHST*PPASLL Trigger: CAGCAAGCTTGCGGGTGGCCAAGTTGAATGATGCTG...ATTATAAATCATTACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR CCA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTATCTGTCTGTGCGGATaGAGTTTCTTTTATCTGACA | + |
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Preference number: 4 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLICLCG*SFFYLT Trigger: TGTCAGATAAAAGAAACTCCATCCGCACAGACAGAT...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR TCA 90 bp | ATGGGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTTGACTAAATCAGGAGGGAATTaGTACCACATCAGGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: MGNQEGIDTTSGIYINLTKSGGN*YHIRDL Trigger: TAAATCCCTGATGTGGTATCAATTCCCTCCTGATTT...AGTCAAATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS-3UTR CAA 90 bp | CCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTGGCTGCAGAGATCATGCCATaGCACTCCAGCCTGGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: PVTQQLSIFTVERPGAVAAEIMP*HSSLGD Trigger: GTCGCCCAGGCTGGAGTGCAATGGCATGATCTCTGC...AGCCACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR CAA 90 bp | CCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTGGCGAGGCGGAGGTTGCATaGAGCCAAGATTGCGTCACT | + |
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Preference number: 5 (lower is better) Translates to: PCDPATFNIYRREARCSGEAEVA*SQDCVT Trigger: AGTGACGCAATCTTGGCTCAATGCAACCTCCGCCTC...GCCACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR CAA 90 bp | ATACCCTGTGACCCAGCAACTTTCAATATTTACCGTAGAGAGGCCAGGTGCAGTTGCATTGAGCCAAGATaGCGTCACTGTACTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: IPCDPATFNIYRREARCSCIEPR*RHCTPA Trigger: GGCTGGAGTACAGTGACGCAATCTTGGCTCAATGCA...ACTGCACCTGGCCTCTCTACGGTAAATATTGAAAGTTGCTGGGTCACAGGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369016.8 |
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| CDS-3UTR CAA 90 bp | CTCCTAAACCAGTGCTCGTCCCACTATCCCATGATACTTTCAAAAGCAACATGCGAGAACCCAGATATCTaGACTCCTAAACCAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LLNQCSSHYPMILSKATCENPDI*TPKPVL Trigger: GAGCACTGGTTTAGGAGTCAAGATATCTGGGTTCTC...GCATGTTGCTTTTGAAAGTATCATGGGATAGTGGGACGAGCACTGGTTTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271690.12 ENST00000356527.9 ENST00000513281.5 |
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| CDS-3UTR CAA 90 bp | TTTATCTACAGAGCTCAACTAGAACCCCTTTTCATTAGGCTACTCCACTTCCTTGCAGCATCATTCAACTaGGCCACCCGCAAGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: FIYRAQLEPLFIRLLHFLAASFN*ATRKLA Trigger: AGCAAGCTTGCGGGTGGCCAAGTTGAATGATGCTGC...AAGGAAGTGGAGTAGCCTAATGAAAAGGGGTTCTAGTTGAGCTCTGTAGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369014.10 |
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| CDS-3UTR CAA 90 bp | ACTTTTGCATTTCATCCGCACAGAGAAGCACACTCCAATGTAATGATTTATAATGCAGCATCATTCAACTaGGCCACCCGCAAGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TFAFHPHREAHSNVMIYNAASFN*ATRKLA Trigger: AGCAAGCTTGCGGGTGGCCAAGTTGAATGATGCTGC...ATTATAAATCATTACATTGGAGTGTGCTTCTCTGTGCGGATGAAATGCAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509582.5 |
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| CDS-3UTR CAA 90 bp | CCTACATGGGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTGAAATCAGGAGGGAATaGATACCACATCAGGGATTT | + |
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Preference number: 5 (lower is better) Translates to: PTWEIRRELIPHQGFTLIEIRRE*IPHQGF Trigger: AAATCCCTGATGTGGTATCAATTCCCTCCTGATTTC...AATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCCCATGTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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| CDS TCA 72 bp | TTCTCCTGCGTGTCCTCGACCCCTATCTTTGCGGATTaGGGCTGCGGGCCCCAGCCCGGTTGCTGGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: FSCVSSTPIFAD*GCGPQPGCWVT Trigger: AGTGACCCAGCAACCGGGCTGGGGCCCGCAGCCTCAATCCGCAAAGATAGGGGTCGAGGACACGCAGGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354702.3 |
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| CDS CAA 72 bp | TTTCTCCTGCGTGTCCTCGACCCCTATCTTTGCGGATaGAGGCTGCGGGCCCCAGCCCGGTTGCTGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FLLRVLDPYLCG*RLRAPARLLGH Trigger: GTGACCCAGCAACCGGGCTGGGGCCCGCAGCCTCAATCCGCAAAGATAGGGGTCGAGGACACGCAGGAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354702.3 |
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| CDS CAA 72 bp | TATCTTTGCGGATTGAGGCTGCGGGCCCCAGCCCGGTaGCTGGGTCACTTACCTCTACAAACCAATAACACA | + |
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Preference number: 6 (lower is better) Translates to: YLCGLRLRAPAR*LGHLPLQTNNT Trigger: TGTGTTATTGGTTTGTAGAGGTAAGTGACCCAGCAACCGGGCTGGGGCCCGCAGCCTCAATCCGCAAAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354702.3 |
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| CDS CAA 90 bp | GGAAATCAGGAGGGAATTGATACCACATCAGGGATTTACATTAATTaGACTTGCTCTTTTCAAATTTCAAATTCGCCTCTACTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GNQEGIDTTSGIYIN*TCSFQISNSPLLLF Trigger: GAACAGAAGTAGAGGCGAATTTGAAATTTGAAAAGAGCAAGTCAAATTAATGTAAATCCCTGATGTGGTATCAATTCCCTCCTGATTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362052.7 |
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