RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENPP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000112796

Ensembl transcript IDs: ENST00000230565.3, ENST00000371383.7, ENST00000492313.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGATTCCACTGAGCACCTGGTAGGTGGGTATTCACATATTTCTTaGAACAGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGT +
Preference number: 1 (lower is better)
Translates to: FDSTEHLVGGYSHIS*NRAISSRLPCFDTC
Trigger: ACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCTGTTTCAAGAAATATGTGAATACCCACCTACCAGGTGCTCAGTGGAATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR GCA 90 bp GTTCTCTGGAAAGAAATAAGACAAGAAATGCCCACAGTTGCATTCTaGTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAAGGTTATC +
Preference number: 1 (lower is better)
Translates to: VLWKEIRQEMPTVAF*CWEYISKIQGSKVI
Trigger: GATAACCTTTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTTGTCTTATTTCTTTCCAGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR GCA 90 bp AAACCACGTTCTCTGGAAAGAAATAAGACAAGAAATGCCCACAGTTaGATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAA +
Preference number: 1 (lower is better)
Translates to: KPRSLERNKTRNAHS*ILLLGIHLQNSRFK
Trigger: TTTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTTGTCTTATTTCTTTCCAGAGAACGTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR CCA 90 bp TGGAAAGAAATAAGACAAGAAATGCCCACAGTTGCATTCTGCTGTTaGGAATACATCTCCAAAATTCAAGGTTCAAAGGTTATCACATTT +
Preference number: 1 (lower is better)
Translates to: WKEIRQEMPTVAFCC*EYISKIQGSKVITF
Trigger: AAATGTGATAACCTTTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTTGTCTTATTTCTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR CCA 90 bp ACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATaGTTTGTGCTCTTTCGCAACTTTGAATCTTCAAATGCTCAAATC +
Preference number: 1 (lower is better)
Translates to: TQFFSRIEWPIFYLI*FVLFRNFESSNAQI
Trigger: GATTTGAGCATTTGAAGATTCAAAGTTGCGAAAGAGCACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR TCA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTATCCCTATGCTACAGTaGACAATGGAGACATACTCT +
Preference number: 2 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAAIPMLQ*TMETYS
Trigger: AGAGTATGTCTCCATTGTTCACTGTAGCATAGGGAT...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR CAA 90 bp GGAGACATACTCTCACATCTTTATTCCTTTGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTATACCT +
Preference number: 2 (lower is better)
Translates to: GDILSHLYSFAGVSI*VRVCVCVCVCVCIP
Trigger: AGGTATACACACACACACACACACACATACACACACACGGACCAAAATACTTACACCTGCAAAGGAATAAAGATGTGAGAGTATGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR GCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCTTATCTATCCCTATaGTACAGTGAACAATGGAGA +
Preference number: 2 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGSYLSL*YSEQWR
Trigger: TCTCCATTGTTCACTGTAGCATAGGGATAGATAAGA...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATCTTATCTATCCCTATaGTACAGTGAACAATGGAGA +
Preference number: 2 (lower is better)
Translates to: RAISSRLPCFDTCYHKELSYLSL*YSEQWR
Trigger: TCTCCATTGTTCACTGTAGCATAGGGATAGATAAGA...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR CCA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGGTTTCTGCAAATGTTTaGAACTGGTTTCCCAGAATT +
Preference number: 2 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRVSANV*NWFPRI
Trigger: AATTCTGGGAAACCAGTTCCAAACATTTGCAGAAAC...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGTTTCTGCAAATGTTTaGAACTGGTTTCCCAGAATT +
Preference number: 2 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFVSANV*NWFPRI
Trigger: AATTCTGGGAAACCAGTTCCAAACATTTGCAGAAAC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR TCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGATCCCTATGCTACAGTaGACAATGGAGACATACTCT +
Preference number: 2 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGIPMLQ*TMETYS
Trigger: AGAGTATGTCTCCATTGTTCACTGTAGCATAGGGAT...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR CAA 90 bp CTGGAAAGAAATAAGACAAGAAATGCCCACAGTTGCATTCTGCTGTaGGGAATACATCTCCAAAATTCAAGGTTCAAAGGTTATCACATT +
Preference number: 2 (lower is better)
Translates to: LERNKTRNAHSCILL*GIHLQNSRFKGYHI
Trigger: AATGTGATAACCTTTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTTGTCTTATTTCTTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR CAA 90 bp CACATATTTCTTGAAACAGAGCTATATCATCTCGGCTCCCGTGTTTaGATACCTGTTACCACAAAGAGTTATTTTGCTGCTTTTTCTAGT +
Preference number: 2 (lower is better)
Translates to: HIFLETELYHLGSRV*IPVTTKSYFAAFSS
Trigger: ACTAGAAAAAGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCTGTTTCAAGAAATATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR CAA 90 bp ATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCTGGGGAGTTaGCTACCTACCATATACTTTCTCAGCTTTTTAATCTATAGGCCA +
Preference number: 2 (lower is better)
Translates to: MYSEMSNPEFILLGS*LPTIYFLSFLIYRP
Trigger: TGGCCTATAGATTAAAAAGCTGAGAAAGTATATGGTAGGTAGCAAACTCCCCAGAAGTATGAACTCTGGATTAGACATCTCAGAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR GCA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTTCTAAAAGATGCTTGTaGTCTGTTATTATGCGCTAC +
Preference number: 2 (lower is better)
Translates to: HTVLFKDRVANILPNMVCSKRCL*SVIMRY
Trigger: GTAGCGCATAATAACAGAGCACAAGCATCTTTTAGA...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR TCA 72 bp ACTGAGCACCTGGTAGGTGGGTATTCACATATTTCTTaGAACAGAGCTATATCATCTCGGCTCCCGTGTTTT +
Preference number: 3 (lower is better)
Translates to: TEHLVGGYSHIS*NRAISSRLPCF
Trigger: AAAACACGGGAGCCGAGATGATATAGCTCTGTTTCAAGAAATATGTGAATACCCACCTACCAGGTGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGT +
Preference number: 3 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSAGVSI*VRVCVC
Trigger: ACATACACACACACGGACCAAAATACTTACACCTGC...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGGTTTCTGCAAATGTTaGGAACTGGTTTCCCAGAAT +
Preference number: 3 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSGFCKC*ELVSQN
Trigger: ATTCTGGGAAACCAGTTCCAAACATTTGCAGAAACC...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR CAA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGGTTTCTGCAAATGTTaGGAACTGGTTTCCCAGAAT +
Preference number: 3 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFGFCKC*ELVSQN
Trigger: ATTCTGGGAAACCAGTTCCAAACATTTGCAGAAACC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR-3UTR CAA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCAAACAAGAGAAAACATaGCTGAGATGGTGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: SQHECSCILRCLIQSSYFKQEKT*LRWCLV
Trigger: AACCAGGCACCATCTCAGCAATGTTTTCTCTTGTTT...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR CAA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGAAATCTAAAAGATGCTaGTGCTCTGTTATTATGCGC +
Preference number: 3 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWKSKRC*CSVIMR
Trigger: GCGCATAATAACAGAGCACAAGCATCTTTTAGATTT...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR TCA 72 bp TTGAAACAGAGCTATATCATCTCGGCTCCCGTGTTTTaGTACCTGTTACCACAAAGAGTTATTTTGCTGCTT +
Preference number: 3 (lower is better)
Translates to: LKQSYIISAPVF*YLLPQRVILLL
Trigger: AAGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCTGTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR CCA 72 bp TTTCCAGGCTCCACACAGTTCTTTTCAAGGATCGAGTaGCCAATATTTTACCTAATATGGTTTGTGCTCTTT +
Preference number: 3 (lower is better)
Translates to: FPGSTQFFSRIE*PIFYLIWFVLF
Trigger: AAAGAGCACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR-3UTR CAA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGT +
Preference number: 3 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGAGVSI*VRVCVC
Trigger: ACATACACACACACGGACCAAAATACTTACACCTGC...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR GCA 72 bp AATAATTACAAACAAGAGAAAACATTGCTGAGATGGTaGCTGGTTGCTTCTATTCAGGCCATTGCTGAACTA +
Preference number: 3 (lower is better)
Translates to: NNYKQEKTLLRW*LVASIQAIAEL
Trigger: TAGTTCAGCAATGGCCTGAATAGAAGCAACCAGGCACCATCTCAGCAATGTTTTCTCTTGTTTGTAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
3UTR CCA 72 bp TTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATaGTTTGTGCTCTTTCGCAACTTTGAATCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: FSRIEWPIFYLI*FVLFRNFESSN
Trigger: ATTTGAAGATTCAAAGTTGCGAAAGAGCACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGGTAACGGCGGGAGGGTaGCTGGAGGAACGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLVTAGG*LEERPR
Trigger: CCGGGGGCGTTCCTCCAGTCACCCTCCCGCCGTTAC...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCACGGCGGGAGGGTGACTaGAGGAACGCCCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSRREGD*RNAPGT
Trigger: CGTTCCGGGGGCGTTCCTCCAGTCACCCTCCCGCCG...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACGGGAGGGAGGGTCTaGAGGAGACTCCCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSTGGRV*RRLPRA
Trigger: CGCCCGAGGGAGTCTCCTCCAGACCCTCCCTCCCGT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGGTAACGGCGGGAGGGTaGCTGGAGGAACGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGVTAGG*LEERPR
Trigger: CCGGGGGCGTTCCTCCAGTCACCCTCCCGCCGTTAC...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGCGGCGGGAGGGTGACTaGAGGAACGCCCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGRREGD*RNAPGT
Trigger: CGTTCCGGGGGCGTTCCTCCAGTCACCCTCCCGCCG...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTTCCGGGCCACATGGCTaGACCACTAGTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAASGPHG*TTSMSC
Trigger: GCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGA...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAATCCGGGCCACATGGCTaGACCACTAGTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQSGPHG*TTSMSC
Trigger: GCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGA...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCTGTCAGGTCCCAAATaGTGGCCCATGTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGLSGPK*WPMSSG
Trigger: CCCTGATGACATGGGCCACCATTTGGGACCTGACAG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCAGTCCGTATTAGTTTaGAGCAACGGGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGQSVLV*SNGREG
Trigger: ACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCCAGTCCGTATTAGTTTaGAGCAACGGGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFQSVLV*SNGREG
Trigger: ACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTG...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCTCAGGTCCCAAATGGTaGCCCATGTCATCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFSGPKW*PMSSGS
Trigger: AGACCCTGATGACATGGGCCACCATTTGGGACCTGA...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAACCTGCGCTCAACTCTaGAGCGGAGCACCTGACCGC +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGTCAQL*SGAPDR
Trigger: GCGGTCAGGTGCTCCGCTCCAGAGTTGAGCGCAGGT...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCTGCCCTCTGGTTTGTaGTCCATATTGGTGTCGCTT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGLPSGL*SILVSL
Trigger: AAGCGACACCAATATGGATCACAAACCAGAGGGCAG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACTGCCCTCTGGTTTGTaGTCCATATTGGTGTCGCTT +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQLPSGL*SILVSL
Trigger: AAGCGACACCAATATGGATCACAAACCAGAGGGCAG...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCACTGGACATTCCAGAATaGTCCATTGTGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSLDIPE*SIVWHG
Trigger: GCCATGCCACACAATGGATCATTCTGGAATGTCCAG...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCTGGACATTCCAGAATaGTCCATTGTGTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGLDIPE*SIVWHG
Trigger: GCCATGCCACACAATGGATCATTCTGGAATGTCCAG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCACCCTTGGCATTGCTaGATTGAGCAGATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKHPWHC*IEQILD
Trigger: GTCCAGGATCTGCTCAATTCAGCAATGCCAAGGGTG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCCACCCTTGGCATTGCTaGATTGAGCAGATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SQHECSCILRCLIQSSYFHPWHC*IEQILD
Trigger: GTCCAGGATCTGCTCAATTCAGCAATGCCAAGGGTG...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGAGATGGTGCCTGGTTaGTTCTATTCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFEMVPG*FYSGHC
Trigger: GCAATGGCCTGAATAGAAGCAACCAGGCACCATCTC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAGAGATGGTGCCTGGTTaGTTCTATTCAGGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELEMVPG*FYSGHC
Trigger: GCAATGGCCTGAATAGAAGCAACCAGGCACCATCTC...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTGCTATGGATGGTAGTTaGTCTCTCTGTCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAAAMDGS*SLCPFS
Trigger: GGAGAAAGGACAGAGAGAGCAACTACCATCCATAGC...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGAGAGAAAAGGTGGTTaGAAGACTCAGTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFERKGG*KTQCSK
Trigger: CTTGCTGCACTGAGTCTTTCAACCACCTTTTCTCTC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTTGGCATTGCTGAATTaGGCAGATCCTGGACATTCC +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGLALLN*ADPGHS
Trigger: GGAATGTCCAGGATCTGCTCAATTCAGCAATGCCAA...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGTTGGCATTGCTGAATTaGGCAGATCCTGGACATTCC +
Preference number: 4 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLLALLN*ADPGHS
Trigger: GGAATGTCCAGGATCTGCTCAATTCAGCAATGCCAA...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACCACTAGTATGTCCTaGCCTCTGGTTTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSTTSMS*PLVCDP
Trigger: TGGATCACAAACCAGAGGGCAGGACATACTAGTGGT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTGTATGTCCTGCCCTCTaGTTTGTGATCCATATTGGT +
Preference number: 4 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAAVCPAL*FVIHIG
Trigger: ACCAATATGGATCACAAACCAGAGGGCAGGACATAC...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAATTTGCAACAATCCCATaGTTCTCTGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQFATIP*FSAKRP
Trigger: TGGCCTCTTTGCAGAGAATCATGGGATTGTTGCAAA...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCCTTCTTGTCAATATCTaGAATGACAGGCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFLLVNI*NDRPHE
Trigger: CTCATGGGGCCTGTCATTTCAGATATTGACAAGAAG...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACTTCTTGTCAATATCTaGAATGACAGGCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQLLVNI*NDRPHE
Trigger: CTCATGGGGCCTGTCATTTCAGATATTGACAAGAAG...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGCATCAGCCACTGCTATaGTTGGTTGAATTCGACTGT +
Preference number: 4 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRHQPLL*LVEFDC
Trigger: ACAGTCGAATTCAACCAATCATAGCAGTGGCTGATG...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAATTGAGAAATTCTTTCTaGAGGCAGGACCATGGGCTA +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQLRNSF*RQDHGL
Trigger: TAGCCCATGGTCCTGCCTTCAGAAAGAATTTCTCAA...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCAAGAGAGACCCCTATaGAATAAGGGTATGACCCCT +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKQERPL*NKGMTP
Trigger: AGGGGTCATACCCTTATTTCATAGGGGTCTCTCTTG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGAAGAGAAAACATTGCTaGGATGGTGCCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRKRKHC*DGAWLL
Trigger: AAGCAACCAGGCACCATCTCAGCAATGTTTTCTCTT...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGAAGAGAAAACATTGCTaGGATGGTGCCTGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWKRKHC*DGAWLL
Trigger: AAGCAACCAGGCACCATCTCAGCAATGTTTTCTCTT...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCAAAGCAAGCCAACATaGGTGCTCATGTATTCTGAG +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGQSKPT*VLMYSE
Trigger: CTCAGAATACATGAGCACTCATGTTGGCTTGCTTTG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCCCCTTCATCAGCCACTaGTATGATTGGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFPFISH*YDWLNS
Trigger: CGAATTCAACCAATCATAGCAGTGGCTGATGAAGGG...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACATTGCTGAGATGGTaGCTGGTTGCTTCTATTCAG +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSTLLRW*LVASIQ
Trigger: CTGAATAGAAGCAACCAGGCACCATCTCAGCAATGT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAACATTGCTGAGATGGTaGCTGGTTGCTTCTATTCAG +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELTLLRW*LVASIQ
Trigger: CTGAATAGAAGCAACCAGGCACCATCTCAGCAATGT...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGTATGTCCTGCCCTCTaGTTTGTGATCCATATTGGT +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFVCPAL*FVIHIG
Trigger: ACCAATATGGATCACAAACCAGAGGGCAGGACATAC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGACTGTCAGGTCCCAAATaGTGGCCCATGTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGLSGPK*WPMSSG
Trigger: CCCTGATGACATGGGCCACCATTTGGGACCTGACAG...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCTGAAGGCAGGACCATaGGCTAAAAATATTGGATGC +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGLKAGP*AKNIGC
Trigger: GCATCCAATATTTTTAGCCCATGGTCCTGCCTTCAG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGGGTATGACCCCTCTTaGTCATATTCTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSGYDPS*SYSAGL
Trigger: TAAACCAGCAGAATATGACCAAGAGGGGTCATACCC...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCCAGAGTTCATACTTCTaGGGAGTTTGCTACCTACCA +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFQSSYF*GVCYLP
Trigger: TGGTAGGTAGCAAACTCCCCAGAAGTATGAACTCTG...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR CAA 72 bp CTCTCACATCTTTATTCCTTTGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSHLYSFAGVSI*VRVCVCVCVCV
Trigger: CACACACACACACACACATACACACACACGGACCAAAATACTTACACCTGCAAAGGAATAAAGATGTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTCAGTGCAGCAAGTATaGAGGACACCAAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWSVQQV*RTPREI
Trigger: AATTTCTCTTGGTGTCCTTCATACTTGCTGCACTGA...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCCACTGCGTCATTCCATaGTCACTTGTGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: SQHECSCILRCLIQSSYFHCVIP*SLVMIR
Trigger: CCTAATCATCACAAGTGATCATGGAATGACGCAGTG...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCATCAGCCACTGCTATaGTTGGTTGAATTCGACTGT +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKHQPLL*LVEFDC
Trigger: ACAGTCGAATTCAACCAATCATAGCAGTGGCTGATG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAACTAGTAGAACCTTTTaGTGGTCTGGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSTSRTF*WSGWRE
Trigger: TTCTCTCCAACCAGACCAGCAAAAGGTTCTACTAGT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCACTAGTAGAACCTTTTaGTGGTCTGGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFTSRTF*WSGWRE
Trigger: TTCTCTCCAACCAGACCAGCAAAAGGTTCTACTAGT...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCCCTTCATCAGCCACTaGTATGATTGGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKPFISH*YDWLNS
Trigger: CGAATTCAACCAATCATAGCAGTGGCTGATGAAGGG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCCTCTTGGTCATATTCTaGTGGTTTAACACTACCAGG +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFLLVIF*WFNTTR
Trigger: CCTGGTAGTGTTAAACCAGCAGAATATGACCAAGAG...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTACTCTTGGTCATATTCTaGTGGTTTAACACTACCAGG +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELLLVIF*WFNTTR
Trigger: CCTGGTAGTGTTAAACCAGCAGAATATGACCAAGAG...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTAGAAATGCCCACAGTTaGATTCTGCTGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGRNAHS*ILLLGI
Trigger: TATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGAACCTTTTGCTGGTCTaGTTGGAGAGAAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKNLLLV*LERKGG
Trigger: ACCACCTTTTCTCTCCAACCAGACCAGCAAAAGGTT...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCTGAAGGCAGGACCATaGGCTAAAAATATTGGATGC +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKLKAGP*AKNIGC
Trigger: GCATCCAATATTTTTAGCCCATGGTCCTGCCTTCAG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTGTGATATTGAGGAGGTaGCATAGTAGTGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGVILRR*HSSGYK
Trigger: TTTGTACCCACTACTATGCCACCTCCTCAATATCAC...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCTTGGTCATATTCTGCTaGTTTAACACTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFLVIFC*FNTTRE
Trigger: CTCCCTGGTAGTGTTAAACCAGCAGAATATGACCAA...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTGGTCATATTCTGCTaGTTTAACACTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELLVIFC*FNTTRE
Trigger: CTCCCTGGTAGTGTTAAACCAGCAGAATATGACCAA...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
3UTR CAA 72 bp CTTGAAACAGAGCTATATCATCTCGGCTCCCGTGTTTaGATACCTGTTACCACAAAGAGTTATTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LETELYHLGSRV*IPVTTKSYFAA
Trigger: AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCTGTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGTTCATGGCTTCTTTTaGGAAATTCTTTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSVHGFF*EILSEG
Trigger: GCCTTCAGAAAGAATTTCTCAAAAGAAGCCATGAAC...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAGTTCATGGCTTCTTTTaGGAAATTCTTTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELVHGFF*EILSEG
Trigger: GCCTTCAGAAAGAATTTCTCAAAAGAAGCCATGAAC...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCATATGAAATAAGGGTATaGCCCCTCTTGGTCATATTC +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSYEIRV*PLLVIF
Trigger: GAATATGACCAAGAGGGGTCATACCCTTATTTCATA...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTCAAGAGAGACCCCTATaGAATAAGGGTATGACCCCT +
Preference number: 4 (lower is better)
Translates to: HTVLFKDRVANILPNMVCQERPL*NKGMTP
Trigger: AGGGGTCATACCCTTATTTCATAGGGGTCTCTCTTG...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGATCCCTATGCTACAGTaGACAATGGAGACATACTCT +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKIPMLQ*TMETYS
Trigger: AGAGTATGTCTCCATTGTTCACTGTAGCATAGGGAT...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTACCACTAGTATGTCCTaGCCTCTGGTTTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: HTVLFKDRVANILPNMVCTTSMS*PLVCDP
Trigger: TGGATCACAAACCAGAGGGCAGGACATACTAGTGGT...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTATTCTGTAAAATGTaGCACCCTTCATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRLFCKM*HPSSAT
Trigger: AGTGGCTGATGAAGGGTGGCACATTTTACAGAATAA...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCATTATTCTGTAAAATGTaGCACCCTTCATCAGCCACT +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSLFCKM*HPSSAT
Trigger: AGTGGCTGATGAAGGGTGGCACATTTTACAGAATAA...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGTACTTCTGGGGAGTTTaGTACCTACCATATACTTTC +
Preference number: 4 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLYFWGV*YLPYTF
Trigger: GAAAGTATATGGTAGGTAGCAAACTCCCCAGAAGTA...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCGCAAGCCAACATGAGTaGTCATGTATTCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: SQHECSCILRCLIQSSYFASQHE*SCILRC
Trigger: ACATCTCAGAATACATGAGCACTCATGTTGGCTTGC...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAAATTTACCTTCTTTTaGCAAGATGGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSKFTFF*QDGCYW
Trigger: CCAGTAGCAGCCATCTTGCCAAAAGAAGGTAAATTT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTAAATTTACCTTCTTTTaGCAAGATGGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGKFTFF*QDGCYW
Trigger: CCAGTAGCAGCCATCTTGCCAAAAGAAGGTAAATTT...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGCCACTGCTATGATTaGTTGAATTCGACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFSHCYD*LNSTVV
Trigger: TACAACAGTCGAATTCAACCAATCATAGCAGTGGCT...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCGTGATATTGAGGAGGTaGCATAGTAGTGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: SQHECSCILRCLIQSSYFVILRR*HSSGYK
Trigger: TTTGTACCCACTACTATGCCACCTCCTCAATATCAC...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTAAAACATTGCTGAGATaGTGCCTGGTTGCTTCTATT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGKTLLR*CLVASI
Trigger: AATAGAAGCAACCAGGCACCATCTCAGCAATGTTTT...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAAAAACATTGCTGAGATaGTGCCTGGTTGCTTCTATT +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELKTLLR*CLVASI
Trigger: AATAGAAGCAACCAGGCACCATCTCAGCAATGTTTT...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGACTTTACCACTGTTCTaGGTGTCTTGTAAACATCTC +
Preference number: 4 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWTLPLF*VSCKHL
Trigger: GAGATGTTTACAAGACACCCAGAACAGTGGTAAAGT...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAACTGCTATGATTGGTTaGATTCGACTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQTAMIG*IRLLYL
Trigger: CAAATACAACAGTCGAATTCAACCAATCATAGCAGT...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTGCTTGTAATAATGGTTaGGCTATTTCAGCATGCATA +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGACNNG*AISACI
Trigger: TATGCATGCTGAAATAGCTCAACCATTATTACAAGC...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGGCTTGTAATAATGGTTaGGCTATTTCAGCATGCATA +
Preference number: 4 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLACNNG*AISACI
Trigger: TATGCATGCTGAAATAGCTCAACCATTATTACAAGC...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR TCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGATCGGCTCCCGTGTTTTaGTACCTGTTACCACAAAGA +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGSAPVF*YLLPQR
Trigger: TCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGA...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGTCTTATCTATCCCTATaGTACAGTGAACAATGGAGA +
Preference number: 4 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLSYLSL*YSEQWR
Trigger: TCTCCATTGTTCACTGTAGCATAGGGATAGATAAGA...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATCTAAAAGATGCTTGTaGTCTGTTATTATGCGCTAC +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELSKRCL*SVIMRY
Trigger: GTAGCGCATAATAACAGAGCACAAGCATCTTTTAGA...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTTGTGATCCATATTaGTGTCGCTTCTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKVCDPY*CRFFPK
Trigger: TTTTGGGAAGAAGCGACACCAATATGGATCACAAAC...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp TCTAGTATGCACACTTTACCACTGTTCTGGGTGTCTTGTAAACATCTCACATGTAGCCACTGCTATGATTaGTTGAATTCGACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SSMHTLPLFWVSCKHLTCSHCYD*LNSTVV
Trigger: TACAACAGTCGAATTCAACCAATCATAGCAGTGGCT...ACATGTGAGATGTTTACAAGACACCCAGAACAGTGGTAAAGTGTGCATACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAGTTTCTGCAAATGTTTaGAACTGGTTTCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQVSANV*NWFPRI
Trigger: AATTCTGGGAAACCAGTTCCAAACATTTGCAGAAAC...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTGTTTCTGCAAATGTTTaGAACTGGTTTCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGVSANV*NWFPRI
Trigger: AATTCTGGGAAACCAGTTCCAAACATTTGCAGAAAC...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGTTGCATTCTGCTGTTaGGAATACATCTCCAAAATT +
Preference number: 4 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFVAFCC*EYISKI
Trigger: AATTTTGGAGATGTATTCCCAACAGCAGAATGCAAC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTGTTGCATTCTGCTGTTaGGAATACATCTCCAAAATT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGVAFCC*EYISKI
Trigger: AATTTTGGAGATGTATTCCCAACAGCAGAATGCAAC...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGATTTGCAACAATCCCATaGTTCTCTGCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGFATIP*FSAKRP
Trigger: TGGCCTCTTTGCAGAGAATCATGGGATTGTTGCAAA...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGACACTGCGTCATTCCATaGTCACTTGTGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGHCVIP*SLVMIR
Trigger: CCTAATCATCACAAGTGATCATGGAATGACGCAGTG...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAATCCCATGATTCTCTaGAAAGAGGCCAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGNPMIL*KEASYQ
Trigger: TTGGTAACTGGCCTCTTTGCAGAGAATCATGGGATT...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAGAAATGGGAATTATGTaGCAACATTCCTTATTGGTA +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELEMGIM*QHSLLV
Trigger: TACCAATAAGGAATGTTGGCACATAATTCCCATTTC...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAGTTGGAGAGAAAAGGTaGTTGAAAGACTCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGVGEKR*LKDSVQ
Trigger: CTGCACTGAGTCTTTCAACCACCTTTTCTCTCCAAC...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAAACCTTTTGCTGGTCTaGTTGGAGAGAAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGNLLLV*LERKGG
Trigger: ACCACCTTTTCTCTCCAACCAGACCAGCAAAAGGTT...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCTTTATCCAGGTACTaGTCAAGTTCTATTAACCTT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGSLSRY*SSSINL
Trigger: AAGGTTAATAGAACTTGACCAGTACCTGGATAAAGA...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATCTTTATCCAGGTACTaGTCAAGTTCTATTAACCTT +
Preference number: 4 (lower is better)
Translates to: RAISSRLPCFDTCYHKELSLSRY*SSSINL
Trigger: AAGGTTAATAGAACTTGACCAGTACCTGGATAAAGA...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAAATCTGTGGAGTTCATaGCTTCTTTTGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQNLWSS*LLLRNS
Trigger: AGAATTTCTCAAAAGAAGCCATGAACTCCACAGATT...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTAATCTGTGGAGTTCATaGCTTCTTTTGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGNLWSS*LLLRNS
Trigger: AGAATTTCTCAAAAGAAGCCATGAACTCCACAGATT...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGGAATTGAGCAGATCCTaGACATTCCAGAATGATCCA +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGELSRS*TFQNDP
Trigger: TGGATCATTCTGGAATGTCCAGGATCTGCTCAATTC...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAGGGTATGACCCCTCTTaGTCATATTCTGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGGYDPS*SYSAGL
Trigger: TAAACCAGCAGAATATGACCAAGAGGGGTCATACCC...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGATCAGTGCAGCAAGTATaGAGGACACCAAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGSVQQV*RTPREI
Trigger: AATTTCTCTTGGTGTCCTTCATACTTGCTGCACTGA...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTTATGAAATAAGGGTATaGCCCCTCTTGGTCATATTC +
Preference number: 4 (lower is better)
Translates to: HTVLFKDRVANILPNMVCYEIRV*PLLVIF
Trigger: GAATATGACCAAGAGGGGTCATACCCTTATTTCATA...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR GCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGTTTTGGCAAGATGGCTaGTACTGGAGATTGATCAAT +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGFWQDG*YWRLIN
Trigger: ATTGATCAATCTCCAGTAGCAGCCATCTTGCCAAAA...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAAGAAATGCCCACAGTTaGATTCTGCTGTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGRNAHS*ILLLGI
Trigger: TATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CCA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTGTTTGTGATCCATATTaGTGTCGCTTCTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HTVLFKDRVANILPNMVCVCDPY*CRFFPK
Trigger: TTTTGGGAAGAAGCGACACCAATATGGATCACAAAC...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGAAAACCACGTTCTCTaGAAAGAAATAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKENHVL*KEIRQE
Trigger: TTCTTGTCTTATTTCTTTCCAGAGAACGTGGTTTTC...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR TCA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGACTGCTATGATTGGTTaGATTCGACTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGTAMIG*IRLLYL
Trigger: CAAATACAACAGTCGAATTCAACCAATCATAGCAGT...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR GCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGACTGCTTTTTCTAGTATaGACACTTTACCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGLLFLV*TLYHCS
Trigger: AGAACAGTGGTAAAGTGTGCATACTAGAAAAAGCAG...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CCA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAAGTAATGCTCTAAAATaGACCAATTTCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGSNALK*TNFTFQ
Trigger: CTGGAAGGTGAAATTGGTCCATTTTAGAGCATTACT...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS TCA 90 bp CTGGAGGAGACTCCCTCGGGCGCGCCGCGGGTAACGGCGGGAGGGTaGCTGGAGGAACGCCCCCGGAACGCGCAGGAGCTCACCTGCGCT +
Preference number: 5 (lower is better)
Translates to: LEETPSGAPRVTAGG*LEERPRNAQELTCA
Trigger: AGCGCAGGTGAGCTCCTGCGCGTTCCGGGGGCGTTCCTCCAGTCACCCTCCCGCCGTTACCCGCGGCGCGCCCGAGGGAGTCTCCTCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 90 bp TTTTCTCTCCCACCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTTaGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCCCTCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: FSLPPSQRSVQSVLV*SNGREGLEETPSGA
Trigger: CGCGCCCGAGGGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGGTGGGAGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS CCA 90 bp TCTGTTCCGGGCCACATGGCTGCACCACTAGTATGTCCTGCCCTCTaGTTTGTGATCCATATTGGTGTCGCTTCTTCCCAAAACTTGGAA +
Preference number: 5 (lower is better)
Translates to: SVPGHMAAPLVCPAL*FVIHIGVASSQNLE
Trigger: TTCCAAGTTTTGGGAAGAAGCGACACCAATATGGATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS GCA 90 bp TTTTACATCTGTTCCGGGCCACATGGCTGCACCACTAGTATGTCCTaGCCTCTGGTTTGTGATCCATATTGGTGTCGCTTCTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: FYICSGPHGCTTSMS*PLVCDPYWCRFFPK
Trigger: TTTTGGGAAGAAGCGACACCAATATGGATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGAACAGATGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS GCA 90 bp AGGAAAGCGCTTATGTATTTTTACATCTGTTCCGGGCCACATGGCTaGACCACTAGTATGTCCTGCCCTCTGGTTTGTGATCCATATTGG +
Preference number: 5 (lower is better)
Translates to: RKALMYFYICSGPHG*TTSMSCPLVCDPYW
Trigger: CCAATATGGATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGAACAGATGTAAAAATACATAAGCGCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCTCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFSVRIS*EQREGG
Trigger: CCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGA...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAATCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQSVRIS*EQREGG
Trigger: CCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGA...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTGGCATGGCGGTGATATaGAGGAGGTGGCATAGTAGT +
Preference number: 5 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGGMAVI*RRWHSS
Trigger: ACTACTATGCCACCTCCTCAATATCACCGCCATGCC...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCGGCATGGCGGTGATATaGAGGAGGTGGCATAGTAGT +
Preference number: 5 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFGMAVI*RRWHSS
Trigger: ACTACTATGCCACCTCCTCAATATCACCGCCATGCC...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 90 bp TTCCAGAATGATCCATTGTGTGGCATGGCGGTGATATTGAGGAGGTaGCATAGTAGTGGGTACAAATCTGTGGAGTTCATGGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: FQNDPLCGMAVILRR*HSSGYKSVEFMASF
Trigger: AAAAGAAGCCATGAACTCCACAGATTTGTACCCACTACTATGCCACCTCCTCAATATCACCGCCATGCCACACAATGGATCATTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 90 bp AATCACTATAATGCTGCCAAGAGAGACCCCTATGAAATAAGGGTATaGCCCCTCTTGGTCATATTCTGCTGGTTTAACACTACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: NHYNAAKRDPYEIRV*PLLVIFCWFNTTRE
Trigger: CTCCCTGGTAGTGTTAAACCAGCAGAATATGACCAAGAGGGGTCATACCCTTATTTCATAGGGGTCTCTCTTGGCAGCATTATAGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCATTCCAGAATGATCCATaGTGTGGCATGGCGGTGATA +
Preference number: 5 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSFQNDP*CGMAVI
Trigger: TATCACCGCCATGCCACACAATGGATCATTCTGGAA...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAATTCCAGAATGATCCATaGTGTGGCATGGCGGTGATA +
Preference number: 5 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQFQNDP*CGMAVI
Trigger: TATCACCGCCATGCCACACAATGGATCATTCTGGAA...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGCTTGGCATTGCTGAATaGAGCAGATCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRLGIAE*SRSWTF
Trigger: GAATGTCCAGGATCTGCTCAATTCAGCAATGCCAAG...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp GACCAGGCAGGTCAAAAGTACTACCTTGGAAGTAGAAGTCTATTTGTGAACTTGCTTGGCATTGCTGAATaGAGCAGATCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: DQAGQKYYLGSRSLFVNLLGIAE*SRSWTF
Trigger: GAATGTCCAGGATCTGCTCAATTCAGCAATGCCAAG...CAAGTTCACAAATAGACTTCTACTTCCAAGGTAGTACTTTTGACCTGCCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS TCA 90 bp TGGTCAAGTTCTATTAACCTTTCCTCAGAGCACTGCGTCATTCCATaGTCACTTGTGATGATTAGGTTCAGAGTGTTCCACAACTTTGCC +
Preference number: 5 (lower is better)
Translates to: WSSSINLSSEHCVIP*SLVMIRFRVFHNFA
Trigger: GGCAAAGTTGTGGAACACTCTGAACCTAATCATCACAAGTGATCATGGAATGACGCAGTGCTCTGAGGAAAGGTTAATAGAACTTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGGCTGCTACTGGAGATaGATCAATCAGGGTATAGTG +
Preference number: 5 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKGCYWR*INQGIV
Trigger: CACTATACCCTGATTGATCAATCTCCAGTAGCAGCC...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAGAAATGCCCACAGTaGCATTCTGCTGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFKKCPQ*HSAVGN
Trigger: ATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp GAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTCACAGCCTTAGGTTGTaGGAATGGAAAAGACTGAGA +
Preference number: 5 (lower is better)
Translates to: EMPTVAFCCWEYISKIQGHSLRL*EWKRLR
Trigger: TCTCAGTCTTTTCCATTCCAACAACCTAAGGCTGTG...ACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTTCCAAGGAGAAAGATTaGTTCCGAATAGGATCAAAC +
Preference number: 5 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAASKEKD*FRIGSN
Trigger: GTTTGATCCTATTCGGAACAAATCTTTCTCCTTGGA...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGCAAATTTACCTTCTTTaGGCAAGATGGCTGCTACTG +
Preference number: 5 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRQIYLL*ARWLLL
Trigger: CAGTAGCAGCCATCTTGCCAAAAGAAGGTAAATTTG...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp CATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTATTTTGCTGCTCATGGGCTAAAAATATaGGATGCATATCTGCTAACG +
Preference number: 5 (lower is better)
Translates to: HLGSRVLIPVTTKSYFAAHGLKI*DAYLLT
Trigger: CGTTAGCAGATATGCATCCAATATTTTTAGCCCATG...AGCAGCAAAATAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp TGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAGGTTTCTGCAAATGTTaGGAACTGGTTTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: CPQLHSAVGNTSPKFKVQGFCKC*ELVSQN
Trigger: ATTCTGGGAAACCAGTTCCAAACATTTGCAGAAACC...TTGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGT +
Preference number: 5 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKAGVSI*VRVCVC
Trigger: ACATACACACACACGGACCAAAATACTTACACCTGC...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp TCTAGTATGCACACTTTACCACTGTTCTGGGTGTCTTGTAAACATCTCACATGTGCAGGTGTAAGTATTTaGGTCCGTGTGTGTGTATGT +
Preference number: 5 (lower is better)
Translates to: SSMHTLPLFWVSCKHLTCAGVSI*VRVCVC
Trigger: ACATACACACACACGGACCAAAATACTTACACCTGC...ACATGTGAGATGTTTACAAGACACCCAGAACAGTGGTAAAGTGTGCATACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAAACAAGAGAAAACATaGCTGAGATGGTGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSKQEKT*LRWCLV
Trigger: AACCAGGCACCATCTCAGCAATGTTTTCTCTTGTTT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGAAACAAGAGAAAACATaGCTGAGATGGTGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWKQEKT*LRWCLV
Trigger: AACCAGGCACCATCTCAGCAATGTTTTCTCTTGTTT...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGCTCGGCTCCCGTGTTTaGATACCTGTTACCACAAAG +
Preference number: 5 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGLGSRV*IPVTTK
Trigger: CTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAG...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp TCTAGTATGCACACTTTACCACTGTTCTGGGTGTCTTGTAAACATCTCACATGTAACTTGGATTCATCTTaGATTCCACTGAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: SSMHTLPLFWVSCKHLTCNLDSS*IPLSTW
Trigger: CCAGGTGCTCAGTGGAATCAAAGATGAATCCAAGTT...ACATGTGAGATGTTTACAAGACACCCAGAACAGTGGTAAAGTGTGCATACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp AGCCAACATGAGTGCTCATGTATTCTGAGATGTCTAATCCAGAGTTCATACTTCAAGCACAGCCTTAGGTaGTTGGAATGGAAAAGACTG +
Preference number: 5 (lower is better)
Translates to: SQHECSCILRCLIQSSYFKHSLR*LEWKRL
Trigger: CAGTCTTTTCCATTCCAACAACCTAAGGCTGTGCTT...GAAGTATGAACTCTGGATTAGACATCTCAGAATACATGAGCACTCATGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS TCA 90 bp CTGACTTATTCTGTAAAATGTGCCACCCTTCATCAGCCACTGCTATaGTTGGTTGAATTCGACTGTTGTATTTGTAATGCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LTYSVKCATLHQPLL*LVEFDCCICNATFL
Trigger: CAGAAAGGTGGCATTACAAATACAACAGTCGAATTCAACCAATCATAGCAGTGGCTGATGAAGGGTGGCACATTTTACAGAATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230565.3
ENST00000371383.7
ENST00000492313.1
CDS-3UTR CAA 90 bp AGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGGAGTGTTCCACAACTTaGCCTTTTTCAGCATTTGTA +
Preference number: 5 (lower is better)
Translates to: RNAHSCILLLGIHLQNSRECSTT*PFSAFV
Trigger: TACAAATGCTGAAAAAGGCAAAGTTGTGGAACACTC...CCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp CACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGTTTGTGGCTGCTACTGGAGATaGATCAATCAGGGTATAGTG +
Preference number: 5 (lower is better)
Translates to: HTVLFKDRVANILPNMVCGCYWR*INQGIV
Trigger: CACTATACCCTGATTGATCAATCTCCAGTAGCAGCC...ACAAACCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCACATGGGCTAAAAATATaGGATGCATATCTGCTAACG +
Preference number: 5 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSHGLKI*DAYLLT
Trigger: CGTTAGCAGATATGCATCCAATATTTTTAGCCCATG...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAGTTGCATTCTGCTGTaGGGAATACATCTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: NAHSCILLLGIHLQNSRFSCILL*GIHLQN
Trigger: ATTTTGGAGATGTATTCCCAACAGCAGAATGCAACT...GAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp GGCTCCACACAGTTCTTTTCAAGGATCGAGTGGCCAATATTTTACCTAATATGGATACTTCTGGGGAGTTaGCTACCTACCATATACTTT +
Preference number: 5 (lower is better)
Translates to: GSTQFFSRIEWPIFYLIWILLGS*LPTIYF
Trigger: AAAGTATATGGTAGGTAGCAAACTCCCCAGAAGTAT...CCATATTAGGTAAAATATTGGCCACTCGATCCTTGAAAAGAACTGTGTGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS TCA 90 bp TATGAAGGACACCAAGAGAAATTTCGAAGTCATTTTCAAAGTACTTaGTCAGTTCAGTGTAAGATAATCCTCGCAGCGATCCGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: YEGHQEKFRSHFQST*SVQCKIILAAIRSV
Trigger: GACTGAACGGATCGCTGCGAGGATTATCTTACACTGAACTGATCAAGTACTTTGAAAATGACTTCGAAATTTCTCTTGGTGTCCTTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230565.3
CDS CCA 90 bp ATAGACTTCATCAAATTTACCTTCTTTTGGCAAGATGGCTGCTACTaGAGATTGATCAATCAGGGTATAGTGGTCTTTATCCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: IDFIKFTFFWQDGCY*RLINQGIVVFIQVL
Trigger: CAGTACCTGGATAAAGACCACTATACCCTGATTGATCAATCTCCAGTAGCAGCCATCTTGCCAAAAGAAGGTAAATTTGATGAAGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230565.3
ENST00000371383.7
ENST00000492313.1
CDS-3UTR CAA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGTCCAAGGAGAAAGATTaGTTCCGAATAGGATCAAAC +
Preference number: 5 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKSKEKD*FRIGSN
Trigger: GTTTGATCCTATTCGGAACAAATCTTTCTCCTTGGA...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAAGAAATGCCCACAGTaGCATTCTGCTGTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGKKCPQ*HSAVGN
Trigger: ATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp ATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGGTTCAAAATCTAAAAGATGCTaGTGCTCTGTTATTATGCGC +
Preference number: 5 (lower is better)
Translates to: MPTVAFCCWEYISKIQGSKSKRC*CSVIMR
Trigger: GCGCATAATAACAGAGCACAAGCATCTTTTAGATTT...TGAACCTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTACCACAAAGAGTTATTTaGCTGCTTTTTCTAGTATGC +
Preference number: 5 (lower is better)
Translates to: RAISSRLPCFDTCYHKELPQRVI*LLFLVC
Trigger: GCATACTAGAAAAAGCAGCAAAATAACTCTTTGTGG...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp AGAGCTATATCATCTCGGCTCCCGTGTTTTGATACCTGTTACCACAAAGAGTTAGTCAAAAGTACTACCTaGGAAGTAGAAGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: RAISSRLPCFDTCYHKELVKSTT*EVEVYL
Trigger: CAAATAGACTTCTACTTCCAAGGTAGTACTTTTGAC...TAACTCTTTGTGGTAACAGGTATCAAAACACGGGAGCCGAGATGATATAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS GCA 90 bp CCGAATAGGATCAAACATATCATTTGCAACAATCCCATGATTCTCTaGAAAGAGGCCAGTTACCAAAGTATAATGGTTAGGGTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: PNRIKHIICNNPMIL*KEASYQSIMVRVGF
Trigger: AAAACCTACCCTAACCATTATACTTTGGTAACTGGCCTCTTTGCAGAGAATCATGGGATTGTTGCAAATGATATGTTTGATCCTATTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp AAGAAATGCCCACAGTTGCATTCTGCTGTTGGGAATACATCTCCAAAATTCAAGCACTGCTATGATTGGTaGAATTCGACTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: KKCPQLHSAVGNTSPKFKHCYDW*NSTVVF
Trigger: AAATACAACAGTCGAATTCAACCAATCATAGCAGTG...CTTGAATTTTGGAGATGTATTCCCAACAGCAGAATGCAACTGTGGGCATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp CACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGCACTGCTATGATTGGTaGAATTCGACTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: HLLLLSIYGDRFLRSLFGHCYDW*NSTVVF
Trigger: AAATACAACAGTCGAATTCAACCAATCATAGCAGTG...CCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS-3UTR CAA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGAAGTTGCATTCTGCTGTaGGGAATACATCTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGSCILL*GIHLQN
Trigger: ATTTTGGAGATGTATTCCCAACAGCAGAATGCAACT...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 90 bp TATGAAGGACACCAAGAGAAATTTCGAAGTCATTTTCAAAGTACTTaGTCAGTTCAGTGTAAGATAATCTATCTGGCTATGGATGGTAGT +
Preference number: 5 (lower is better)
Translates to: YEGHQEKFRSHFQST*SVQCKIIYLAMDGS
Trigger: ACTACCATCCATAGCCAGATAGATTATCTTACACTGAACTGATCAAGTACTTTGAAAATGACTTCGAAATTTCTCTTGGTGTCCTTCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS-3UTR CAA 90 bp ACCTTCTTCTTCTCTCAATTTATGGAGATAGATTTCTACGTTCATTATTCGGGATGCTCTTTCGCAACTTaGAATCTTCAAATGCTCAAA +
Preference number: 5 (lower is better)
Translates to: TFFFSQFMEIDFYVHYSGCSFAT*NLQMLK
Trigger: TTTGAGCATTTGAAGATTCAAAGTTGCGAAAGAGCA...TCCCGAATAATGAACGTAGAAATCTATCTCCATAAATTGAGAGAAGAAGAAGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS TCA 72 bp ACTCCCTCGGGCGCGCCGCGGGTAACGGCGGGAGGGTaGCTGGAGGAACGCCCCCGGAACGCGCAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: TPSGAPRVTAGG*LEERPRNAQEL
Trigger: GAGCTCCTGCGCGTTCCGGGGGCGTTCCTCCAGTCACCCTCCCGCCGTTACCCGCGGCGCGCCCGAGGGAGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 72 bp CCACCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTTaGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCCC +
Preference number: 6 (lower is better)
Translates to: PPSQRSVQSVLV*SNGREGLEETP
Trigger: GGGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS CAA 72 bp CCCACCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCC +
Preference number: 6 (lower is better)
Translates to: PTLAAIRSVRIS*EQREGGSGGDS
Trigger: GGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS CAA 90 bp ATTTTCTCTCCCACCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCCCTCGGGCGC +
Preference number: 6 (lower is better)
Translates to: IFSPTLAAIRSVRIS*EQREGGSGGDSLGR
Trigger: GCGCCCGAGGGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGGTGGGAGAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371383.7
CDS CAA 90 bp CAGTGTAAGATAATCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCCCTCGGGCGC +
Preference number: 6 (lower is better)
Translates to: QCKIILAAIRSVRIS*EQREGGSGGDSLGR
Trigger: GCGCCCGAGGGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGATTATCTTACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230565.3
CDS CAA 72 bp ATAATCCTCGCAGCGATCCGTTCAGTCCGTATTAGTTaGGAGCAACGGGAGGGAGGGTCTGGAGGAGACTCC +
Preference number: 6 (lower is better)
Translates to: IILAAIRSVRIS*EQREGGSGGDS
Trigger: GGAGTCTCCTCCAGACCCTCCCTCCCGTTGCTCCAAACTAATACGGACTGAACGGATCGCTGCGAGGATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230565.3
CDS GCA 72 bp TGTTCCGGGCCACATGGCTGCACCACTAGTATGTCCTaGCCTCTGGTTTGTGATCCATATTGGTGTCGCTTC +
Preference number: 6 (lower is better)
Translates to: CSGPHGCTTSMS*PLVCDPYWCRF
Trigger: GAAGCGACACCAATATGGATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 72 bp GGCCACATGGCTGCACCACTAGTATGTCCTGCCCTCTaGTTTGTGATCCATATTGGTGTCGCTTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: GHMAAPLVCPAL*FVIHIGVASSQ
Trigger: TTGGGAAGAAGCGACACCAATATGGATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 72 bp GGGACCACCCTTGGCATTGCTGAATTGAGCAGATCCTaGACATTCCAGAATGATCCATTGTGTGGCATGGCG +
Preference number: 6 (lower is better)
Translates to: GTTLGIAELSRS*TFQNDPLCGMA
Trigger: CGCCATGCCACACAATGGATCATTCTGGAATGTCCAGGATCTGCTCAATTCAGCAATGCCAAGGGTGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CAA 90 bp GGCATTGCTGAATTGAGCAGATCCTGGACATTCCAGAATGATCCATaGTGTGGCATGGCGGTGATATTGAGGAGGTGGCATAGTAGTGGG +
Preference number: 6 (lower is better)
Translates to: GIAELSRSWTFQNDP*CGMAVILRRWHSSG
Trigger: CCCACTACTATGCCACCTCCTCAATATCACCGCCATGCCACACAATGGATCATTCTGGAATGTCCAGGATCTGCTCAATTCAGCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CCA 72 bp GATCCATTGTGTGGCATGGCGGTGATATTGAGGAGGTaGCATAGTAGTGGGTACAAATCTGTGGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: DPLCGMAVILRR*HSSGYKSVEFM
Trigger: CATGAACTCCACAGATTTGTACCCACTACTATGCCACCTCCTCAATATCACCGCCATGCCACACAATGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CAA 72 bp GAATTGAGCAGATCCTGGACATTCCAGAATGATCCATaGTGTGGCATGGCGGTGATATTGAGGAGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: ELSRSWTFQNDP*CGMAVILRRWH
Trigger: ATGCCACCTCCTCAATATCACCGCCATGCCACACAATGGATCATTCTGGAATGTCCAGGATCTGCTCAATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CAA 90 bp TCCTGGACATTCCAGAATGATCCATTGTGTGGCATGGCGGTGATATaGAGGAGGTGGCATAGTAGTGGGTACAAATCTGTGGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: SWTFQNDPLCGMAVI*RRWHSSGYKSVEFM
Trigger: CATGAACTCCACAGATTTGTACCCACTACTATGCCACCTCCTCAATATCACCGCCATGCCACACAATGGATCATTCTGGAATGTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS GCA 72 bp CTTATGTATTTTTACATCTGTTCCGGGCCACATGGCTaGACCACTAGTATGTCCTGCCCTCTGGTTTGTGAT +
Preference number: 6 (lower is better)
Translates to: LMYFYICSGPHG*TTSMSCPLVCD
Trigger: ATCACAAACCAGAGGGCAGGACATACTAGTGGTGCAGCCATGTGGCCCGGAACAGATGTAAAAATACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 72 bp TCTGTGTATAAGGGACCACCCTTGGCATTGCTGAATTaGGCAGATCCTGGACATTCCAGAATGATCCATTGT +
Preference number: 6 (lower is better)
Translates to: SVYKGPPLALLN*ADPGHSRMIHC
Trigger: ACAATGGATCATTCTGGAATGTCCAGGATCTGCTCAATTCAGCAATGCCAAGGGTGGTCCCTTATACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 72 bp TCTATTAACCTTTCCTCAGAGCACTGCGTCATTCCATaGTCACTTGTGATGATTAGGTTCAGAGTGTTCCAC +
Preference number: 6 (lower is better)
Translates to: SINLSSEHCVIP*SLVMIRFRVFH
Trigger: GTGGAACACTCTGAACCTAATCATCACAAGTGATCATGGAATGACGCAGTGCTCTGAGGAAAGGTTAATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 72 bp AACCAGAAACCATGTATCTGTATACATCTGCCACTATaGGTCACGAGCACACTACAAATGCCATTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: NQKPCICIHLPL*VTSTLQMPLFR
Trigger: CCTGAACAATGGCATTTGTAGTGTGCTCGTGACTCATAGTGGCAGATGTATACAGATACATGGTTTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492313.1
CDS CAA 90 bp CACAACTTTGCCTTTTTCAGCATTTGTATGAGATATCCTAACTTCTaGTCAATATCTGAAATGACAGGCCCCATGAGCGGACTGTCAGGT +
Preference number: 6 (lower is better)
Translates to: HNFAFFSICMRYPNF*SISEMTGPMSGLSG
Trigger: ACCTGACAGTCCGCTCATGGGGCCTGTCATTTCAGATATTGACAAGAAGTTAGGATATCTCATACAAATGCTGAAAAAGGCAAAGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS TCA 72 bp TCTGTAAAATGTGCCACCCTTCATCAGCCACTGCTATaGTTGGTTGAATTCGACTGTTGTATTTGTAATGCC +
Preference number: 6 (lower is better)
Translates to: SVKCATLHQPLL*LVEFDCCICNA
Trigger: GGCATTACAAATACAACAGTCGAATTCAACCAATCATAGCAGTGGCTGATGAAGGGTGGCACATTTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230565.3
ENST00000371383.7
ENST00000492313.1
CDS CAA 72 bp GCCTTTTTCAGCATTTGTATGAGATATCCTAACTTCTaGTCAATATCTGAAATGACAGGCCCCATGAGCGGA +
Preference number: 6 (lower is better)
Translates to: AFFSICMRYPNF*SISEMTGPMSG
Trigger: TCCGCTCATGGGGCCTGTCATTTCAGATATTGACAAGAAGTTAGGATATCTCATACAAATGCTGAAAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7
CDS CAA 72 bp TTTACCTTCTTTTGGCAAGATGGCTGCTACTGGAGATaGATCAATCAGGGTATAGTGGTCTTTATCCAGGTA +
Preference number: 6 (lower is better)
Translates to: FTFFWQDGCYWR*INQGIVVFIQV
Trigger: TACCTGGATAAAGACCACTATACCCTGATTGATCAATCTCCAGTAGCAGCCATCTTGCCAAAAGAAGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230565.3
ENST00000371383.7
ENST00000492313.1
CDS CAA 90 bp TTCATCAAATTTACCTTCTTTTGGCAAGATGGCTGCTACTGGAGATaGATCAATCAGGGTATAGTGGTCTTTATCCAGGTACTGGTCAAG +
Preference number: 6 (lower is better)
Translates to: FIKFTFFWQDGCYWR*INQGIVVFIQVLVK
Trigger: CTTGACCAGTACCTGGATAAAGACCACTATACCCTGATTGATCAATCTCCAGTAGCAGCCATCTTGCCAAAAGAAGGTAAATTTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230565.3
ENST00000371383.7
ENST00000492313.1
CDS TCA 72 bp TTCCCAATAGAGAAGACCAAGATTTATGGGCTCTTTTaGCGTAAACCATTCAATAATTTTGGCAACTCTATC +
Preference number: 6 (lower is better)
Translates to: FPIEKTKIYGLF*RKPFNNFGNSI
Trigger: GATAGAGTTGCCAAAATTATTGAATGGTTTACGTCAAAAGAGCCCATAAATCTTGGTCTTCTCTATTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230565.3
ENST00000371383.7