Pregenerated sensors for EMD (Homo sapiens)
Ensembl gene IDs: ENSG00000102119Ensembl transcript IDs: ENST00000369835.3, ENST00000369842.9, ENST00000428228.5, ENST00000468294.5, ENST00000471965.1, ENST00000485261.1, ENST00000486738.5, ENST00000492448.1, ENST00000494443.5, ENST00000682114.1, ENST00000682478.1, ENST00000683576.1, ENST00000683627.1, ENST00000684082.1, ENST00000684678.1
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGTCCAGGGAGCTCCTGGAGGCTGAAACAGGGCGGTAGTGCGTaGTGCTCTGGTAGGCACTGTCCCGGCCGTACATGGGGCGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: TGPGSSWRLKQGGSA*CSGRHCPGRTWGVP Trigger: GGGAACGCCCCATGTACGGCCGGGACAGTGCCTACCAGAGCATCACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 90 bp | TCGAATTCAAGTCAGAGAAGCTATAAGAGGAGGCGGCGGACGAGCTaGGGGGCGAGAGCCGCCGCCTCTGGGTCTCGTACTCGAAGATCT | + |
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Preference number: 1 (lower is better) Translates to: SNSSQRSYKRRRRTS*GARAAASGSRTRRS Trigger: AGATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTCGCCCCCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGACTTGAATTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR TCA 90 bp | GGAGGAAGTAGGATAATAGGACAGGTCCAGGGAGCTCCTGGAGGCTaGAACAGGGCGGTAGTGCGTGATGCTCTGGTAGGCACTGTCCCG | + |
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Preference number: 1 (lower is better) Translates to: GGSRIIGQVQGAPGG*NRAVVRDALVGTVP Trigger: CGGGACAGTGCCTACCAGAGCATCACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACCTGTCCTATTATCCTACTTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR TCA 90 bp | CCCTGGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGTAGTCGTCATTGTAGCCCTTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PWTGRQTRAPHKSWW*SSSLHSSRHCSPCS Trigger: AGAGCAAGGGCTACAATGACGACTACTATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 90 bp | AGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTTGCCTTCTTCAGCCTGCATGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: SQDFPKDLALKPRPS*LPLEGVAFFSLHEV Trigger: CACTTCATGCAGGCTGAAGAAGGCAACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCCCAGCCCCAGGAGCACGGTTTTCAGGCCGGATGGCACGGCGGGTGAGCTCATCATGCACCTGGTaGTGGAAAGCGTCAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: PSPAPGARFSGRMARRVSSSCTW*WKASAS Trigger: AGATGCTGACGCTTTCCATCACCAGGTGCATGATGA...GCTCACCCGCCGTGCCATCCGGCCTGAAAACCGTGCTCCTGGGGCTGGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAGGCACTGTCCCGGCCGTACATGGGGCGTTCCCTATCCTTGCACTCCTCGAGAGCCGCCGCCTCTaGGTCTCGTACTCGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: LVGTVPAVHGAFPILALLESRRL*VSYSKI Trigger: GATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTC...GAGGAGTGCAAGGATAGGGAACGCCCCATGTACGGCCGGGACAGTGCCTACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTGAAGTAGCTCTCTTCATAAAGATCATACATATCTaGATCCCCTCTAGTCGAATT | + |
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Preference number: 2 (lower is better) Translates to: AGRLGLPISPGGEVALFIKIIHI*IPSSRI Trigger: AATTCGACTAGAGGGGATGCAGATATGTATGATCTT...TATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR GCA 90 bp | TACATGGGGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGCGTCATTGTAGCCCTTaGTCTGGTAGAGTAAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: YMGRSLSLHSSSEEDKRSRHCSP*SGRVKR Trigger: ACGCTTTACTCTACCAGAGCAAGGGCTACAATGACG...CGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCCCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR CCA 90 bp | CATGGGGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCAAGCGTCCTCTTTCTTaGGAAGATCATACATATCTG | + |
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Preference number: 2 (lower is better) Translates to: HGAFPILALLFRRRQKIVKRPLS*EDHTYL Trigger: CAGATATGTATGATCTTCCCAAGAAAGAGGACGCTT...GACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 72 bp | AGTCAGAGAAGCTATAAGAGGAGGCGGCGGACGAGCTaGGGGGCGAGAGCCGCCGCCTCTGGGTCTCGTACT | + |
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Preference number: 3 (lower is better) Translates to: SQRSYKRRRRTS*GARAAASGSRT Trigger: AGTACGAGACCCAGAGGCGGCGGCTCTCGCCCCCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGACT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR TCA 72 bp | GGGAGCTCCTGGAGGCTGAAACAGGGCGGTAGTGCGTaGTGCTCTGGTAGGCACTGTCCCGGCCGTACATGG | + |
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Preference number: 3 (lower is better) Translates to: GSSWRLKQGGSA*CSGRHCPGRTW Trigger: CCATGTACGGCCGGGACAGTGCCTACCAGAGCATCACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 72 bp | CATCTGGGAATGAAGTCACTGACTGGCGGACAGCCCTaGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: HLGMKSLTGGQP*TGRQTRAPHKS Trigger: GGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGTCAGTGACTTCATTCCCAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 72 bp | AAGAGGACCATGGAGGGCCTGAGTCTGCTGCCTCCCTaGTGGGACAAGGCAGGGGGAGCAAGCACTACTCTG | + |
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Preference number: 3 (lower is better) Translates to: KRTMEGLSLLPP*WDKAGGASTTL Trigger: CAGAGTAGTGCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTCCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| 3UTR TCA 72 bp | AGGATAATAGGACAGGTCCAGGGAGCTCCTGGAGGCTaGAACAGGGCGGTAGTGCGTGATGCTCTGGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: RIIGQVQGAPGG*NRAVVRDALVG Trigger: GCCTACCAGAGCATCACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACCTGTCCTATTATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR CCA 72 bp | TTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTTGCCTTCTTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: FPKDLALKPRPS*LPLEGVAFFSL Trigger: CAGGCTGAAGAAGGCAACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR TCA 72 bp | GGCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGTAGTCGTCATTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: GRQTRAPHKSWW*SSSLHSSRHCS Trigger: GCTACAATGACGACTACTATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCAAAGCGTCCTCTTTCTaGGGAAGATCATACATATCT | + |
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Preference number: 3 (lower is better) Translates to: HGAFPILALLFRRRQKIVKASSF*GRSYIS Trigger: AGATATGTATGATCTTCCCAAGAAAGAGGACGCTTT...GACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | CCCAGCCCAGCCCCAGGAGCACGGTTTTCAGGCCGGATGGCACGGCGGGTGAGCGGAGCTCCTGGAGGCTaGAACAGGGCGGTAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PSPAPGARFSGRMARRVSGAPGG*NRAVVR Trigger: ACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCC...GCTCACCCGCCGTGCCATCCGGCCTGAAAACCGTGCTCCTGGGGCTGGGCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GACCATGGAGGGCCTGAGTCTGCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGCGGACCATGGAGGGCCTaGGTCTGCTGCCTCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DHGGPESAASLVGQGRGSGPWRA*VCCLPG Trigger: ACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTCC...GCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCCCCCAGAGCGGGACCTaGCGATCCTGGCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QPGLPQRPSSEAQTLMAPPQSGT*RSWPSP Trigger: TGGGCTGGGCCAGGATCGCCAGGTCCCGCTCTGGGG...GGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTG 66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCACTGGCGGACAGCCCTaGACGGGCCGGCAGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: AKAVSQDFPKDLALKPRPTGGQP*TGRQTR Trigger: CCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGT...GGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCACTGGCGGACAGCCCTaGACGGGCCGGCAGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: VSQDFPKDLALKPRPSWLTGGQP*TGRQTR Trigger: CCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGT...GAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGCCCCAGAGCGGGACCTaGCGATCCTGGCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMPQSGT*RSWPSP Trigger: TGGGCTGGGCCAGGATCGCCAGGTCCCGCTCTGGGG...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | AGGACCATGGAGGGCCTGAGTCTGCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGAGAGCCGCCGCCTCTaGGTCTCGTACTCGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: RTMEGLSLLPPWWDKAGGESRRL*VSYSKI Trigger: GATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTC...TCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR TCA 90 bp | GAGTCTGCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGCAAGCACTACTCTGGGGGATGGCACGGCGGGTaGGCCATGAAGAGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: ESAASLVGQGRGSKHYSGGWHGG*AMKRKM Trigger: CATCTTCCTCTTCATGGCTCACCCGCCGTGCCATCC...CCCAGAGTAGTGCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | AAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCACCCCAGAGCGGGACCTaGCGATCCTGGCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KAVSQDFPKDLALKPRPSPQSGT*RSWPSP Trigger: TGGGCTGGGCCAGGATCGCCAGGTCCCGCTCTGGGG...TGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | AGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTGTTGTCCATGGCGGGTaGGGGCTCAGGCGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SQPGLPQRPSSEAQTLMAVVHGG*GLRRRP Trigger: AGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAAC...AGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | CCCACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCCTGCGTAGTTGTCCATaGCGGGTGCGGGCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PTAKAVSQDFPKDLALKPLRSCP*RVRAQA Trigger: CGCCTGAGCCCGCACCCGCCATGGACAACTACGCAG...GGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCGAGCAAGCACTACTCTaGGCTAGGCCCAGCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VSQDFPKDLALKPRPSWLEQALL*ARPSAP Trigger: GGGGGCGCTGGGCCTAGCCCAGAGTAGTGCTTGCTC...GAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCCAGGGCGGTAGTGCGTaGTGCTCTGGTAGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QPGLPQRPSSEAQTLMAPQGGSA*CSGRHC Trigger: ACAGTGCCTACCAGAGCATCACGCACTACCGCCCTG...GGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGGAGCTCCTGGAGGCTaGAACAGGGCGGTAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMGAPGG*NRAVVR Trigger: ACGCACTACCGCCCTGTTTCAGCCTCCAGGAGCTCC...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | ACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGAGTTGTCCATGGCGGGTaGGGGCTCAGGCGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TAKAVSQDFPKDLALKPRVVHGG*GLRRRP Trigger: AGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAAC...TCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCTGCGTAGTTGTCCATaGCGGGTGCGGGCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SQPGLPQRPSSEAQTLMALRSCP*RVRAQA Trigger: CGCCTGAGCCCGCACCCGCCATGGACAACTACGCAG...AGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTGAAGTAGCTCTCTTCATACTGCGTAGTTGTCCATaGCGGGTGCGGGCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: AGRLGLPISPGGEVALFILRSCP*RVRAQA Trigger: CGCCTGAGCCCGCACCCGCCATGGACAACTACGCAG...TATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | AGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCTGGTCCAGGGAGCTCCTaGAGGCTGAAACAGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SQDFPKDLALKPRPSWLPGPGSS*RLKQGG Trigger: ACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACC...AGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGAGTCTGCTGCCTCCCTaGTGGGACAAGGCAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMSLLPP*WDKAGG Trigger: TCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACT...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR TCA 90 bp | GCGGACAGCCCTGGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: ADSPGRAGRLGLPISPGGHKSWW*SSSLHS Trigger: ACTATGAAGAGAGCTACTTCACCACCAGGACTTATG...ACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGCAAGCACTACTCTGGGCTAGGCTCATCATGCACCTGGTaGTGGAAAGCGTCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: AASLVGQGRGSKHYSGLGSSCTW*WKASAS Trigger: AGATGCTGACGCTTTCCATCACCAGGTGCATGATGA...GCCTAGCCCAGAGTAGTGCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR TCA 90 bp | GCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGGGATGGCACGGCGGGTaGGCCATGAAGAGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: AVSQDFPKDLALKPRPSWGWHGG*AMKRKM Trigger: CATCTTCCTCTTCATGGCTCACCCGCCGTGCCATCC...CCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGTGTCCCGGCCGTACATaGGGCGTTCCCTATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMCPGRT*GVPYPC Trigger: GCAAGGATAGGGAACGCCCCATGTACGGCCGGGACA...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTGTCCCGGCCGTACATaGGGCGTTCCCTATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AKAVSQDFPKDLALKPRPCPGRT*GVPYPC Trigger: GCAAGGATAGGGAACGCCCCATGTACGGCCGGGACA...GGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GGGCGAGAGCCGCCGCCTCTGGGTCTCGTACTCGAAGATCTTCTTCTCGTAAAGGAGAGCCGCCGCCTCTaGGTCTCGTACTCGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: GREPPPLGLVLEDLLLVKESRRL*VSYSKI Trigger: GATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTC...CTTTACGAGAAGAAGATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | AGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTTCTACTACAGGCCCGTaGGGGATGTTGTACCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SQPGLPQRPSSEAQTLMASTTGP*GMLYRR Trigger: GCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGA...AGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369835.3 |
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| CDS-3UTR GCA 90 bp | GCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGCAAGCACTACTCTGGGCTAGGCCGTCATTGTAGCCCTTaGTCTGGTAGAGTAAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: AASLVGQGRGSKHYSGLGRHCSP*SGRVKR Trigger: ACGCTTTACTCTACCAGAGCAAGGGCTACAATGACG...GCCTAGCCCAGAGTAGTGCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCTACCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQDFPKDLALKPRPSWLPTGAAR*SARYPK Trigger: TTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGT...AGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | GCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTGAAGTAGCTCTCTTCATATGTCCCGGCCGTACATaGGGCGTTCCCTATCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRLGLPISPGGEVALFICPGRT*GVPYPC Trigger: GCAAGGATAGGGAACGCCCCATGTACGGCCGGGACA...TATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCTCCCTGGTGGGACAAGGCAGGGGGAGCAAGCACTACTCTGGGCTAGGCCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AASLVGQGRGSKHYSGLGHKSWW*SSSLHS Trigger: ACTATGAAGAGAGCTACTTCACCACCAGGACTTATG...GCCTAGCCCAGAGTAGTGCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR TCA 90 bp | AGGACCATGGAGGGCCTGAGTCTGCTGCCTCCCTGGTGGGACAAGGCAGGGGGATGCATGTCAACAAAATaGCAAAGAGGACCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTMEGLSLLPPWWDKAGGCMSTK*QRGPWR Trigger: CCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCA...TCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR GCA 90 bp | CCCAGCCCAGCCCCAGGAGCACGGTTTTCAGGCCGGATGGCACGGCGGGTGAGCAAGATCATACATATCTaGATCCCCTCTAGTCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PSPAPGARFSGRMARRVSKIIHI*IPSSRI Trigger: AATTCGACTAGAGGGGATGCAGATATGTATGATCTT...GCTCACCCGCCGTGCCATCCGGCCTGAAAACCGTGCTCCTGGGGCTGGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GCGGACAGCCCTGGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTAAGCGTCCTCTTTCTTaGGAAGATCATACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADSPGRAGRLGLPISPGGKRPLS*EDHTYL Trigger: CAGATATGTATGATCTTCCCAAGAAAGAGGACGCTT...ACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | CCCACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTAKAVSQDFPKDLALKPKPRPS*LPLEGV Trigger: AACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTT...GGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | AGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCTAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQDFPKDLALKPRPSWLPKPRPS*LPLEGV Trigger: AACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTT...AGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | CCCACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCGGTATCCGAAAGATCTaGGTAGTTGTCCATGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAKAVSQDFPKDLALKPGIRKI*VVVHGG Trigger: CCCGCCATGGACAACTACGCAGATCTTTCGGATACC...GGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | AAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCAGGTATCCGAAAGATCTaGGTAGTTGTCCATGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAVSQDFPKDLALKPRPSGIRKI*VVVHGG Trigger: CCCGCCATGGACAACTACGCAGATCTTTCGGATACC...TGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | ATAAGTCCTGGTGGTGAAGTAGCTCTCTTCATAGTAGTCGTCATTGTAGCCCTTACTGGCGGACAGCCCTaGACGGGCCGGCAGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISPGGEVALFIVVVIVALTGGQP*TGRQTR Trigger: CCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGT...AAGGGCTACAATGACGACTACTATGAAGAGAGCTACTTCACCACCAGGACTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | AAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATCATCATGCACCTGGTaGTGGAAAGCGTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KAVSQDFPKDLALKPRPSSSCTW*WKASAS Trigger: AGATGCTGACGCTTTCCATCACCAGGTGCATGATGA...TGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | CATGGGGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCCAGGGCGGTAGTGCGTaGTGCTCTGGTAGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGAFPILALLFRRRQKIVQGGSA*CSGRHC Trigger: ACAGTGCCTACCAGAGCATCACGCACTACCGCCCTG...GACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | CATGGGGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCGGATGGCACGGCGGGTaGGCCATGAAGAGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HGAFPILALLFRRRQKIVGWHGG*AMKRKM Trigger: CATCTTCCTCTTCATGGCTCACCCGCCGTGCCATCC...GACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMHKSWW*SSSLHS Trigger: ACTATGAAGAGAGCTACTTCACCACCAGGACTTATG...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | TTCTTGGGAAGATCATACATATCTGCATCCCCTCTAGTCGAATTCAAGTCAGAGGTTGTCCATGGCGGGTaGGGGCTCAGGCGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGRSYISASPLVEFKSEVVHGG*GLRRRP Trigger: AGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAAC...CTCTGACTTGAATTCGACTAGAGGGGATGCAGATATGTATGATCTTCCCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | ACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCCTGGGTCCAGGGAGCTCCTaGAGGCTGAAACAGGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGGMHVNKMTKRTMEGLGPGSS*RLKQGG Trigger: ACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACC...CAGGCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | GGCGTTCCCTATCCTTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCATCATGGTCCAGGGAGCTCCTaGAGGCTGAAACAGGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVPYPCTPLQKKTKDRHHGPGSS*RLKQGG Trigger: ACCGCCCTGTTTCAGCCTCCAGGAGCTCCCTGGACC...ATGATGACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR TCA 90 bp | GACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCCTCAGGGCGGTAGTGCGTaGTGCTCTGGTAGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKRRNACQQNDKEDHGGPQGGSA*CSGRHC Trigger: ACAGTGCCTACCAGAGCATCACGCACTACCGCCCTG...AGGCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR GCA 90 bp | ACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACGTCATTGTAGCCCTTaGTCTGGTAGAGTAAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TAKAVSQDFPKDLALKPRRHCSP*SGRVKR Trigger: ACGCTTTACTCTACCAGAGCAAGGGCTACAATGACG...TCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | ATGACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCCCTACTACAGGCCCGTaGGGGATGTTGTACCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MTKGGMHVNKMTKRTMEGPTTGP*GMLYRR Trigger: GCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGG...GCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | ACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCCTGACCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKGGMHVNKMTKRTMEGLTGAAR*SARYPK Trigger: TTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGT...CAGGCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCAAGCGTCCTCTTTCTTaGGAAGATCATACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSQDFPKDLALKPRPSWLKRPLS*EDHTYL Trigger: CAGATATGTATGATCTTCCCAAGAAAGAGGACGCTT...GAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR GCA 90 bp | GCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCAAGATCATACATATCTaGATCCCCTCTAGTCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: AKAVSQDFPKDLALKPRPKIIHI*IPSSRI Trigger: AATTCGACTAGAGGGGATGCAGATATGTATGATCTT...GGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCCTAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKRRNACQQNDKEDHGGPKPRPS*LPLEGV Trigger: AACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTT...AGGCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTCCTGGTGGTGAAGTAGCTCTCTTCATAGTAGTCGTCATTGTAGCCCTTTCCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISPGGEVALFIVVVIVALSGAAR*SARYPK Trigger: TTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGA...AAGGGCTACAATGACGACTACTATGAAGAGAGCTACTTCACCACCAGGACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | ACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGAAAGCGTCCTCTTTCTTaGGAAGATCATACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAKAVSQDFPKDLALKPRKRPLS*EDHTYL Trigger: CAGATATGTATGATCTTCCCAAGAAAGAGGACGCTT...TCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CCA 90 bp | GATGACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGAAAACAAAGTCAGGGTaGCCTTTGGTTAATCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDKRRNACQQNDKEDHGGKTKSG*PLVNPL Trigger: GAGGGGATTAACCAAAGGCCACCCTGACTTTGTTTT...CCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS-3UTR GCA 90 bp | ATGACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCAAGATCATACATATCTaGATCCCCTCTAGTCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: MTKGGMHVNKMTKRTMEGKIIHI*IPSSRI Trigger: AATTCGACTAGAGGGGATGCAGATATGTATGATCTT...GCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS GCA 90 bp | GGCCTGGCGGCGGCCCGGGCCTACCAAAACCGGCCGAGCAACGGCTaGCGAGGAGCACGGCGGGGGCGGCACGAGCGCATCGGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLAAARAYQNRPSNG*RGARRGRHERIGSG Trigger: GCCGCTCCCGATGCGCTCGTGCCGCCCCCGCCGTGCTCCTCGGCAGCCGTTGCTCGGCCGGTTTTGGTAGGCCCGGGCCGCCGCCAGGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000486738.5 |
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| CDS CCA 90 bp | GCAAGGTGGTCAGCTCGGTATCCGAAAGATCTGCGTAGTTGTCCATaGCGGGTGCGGGCTCAGGCGGAGGCCTGGCGGCGGCCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARWSARYPKDLRSCP*RVRAQAEAWRRPGP Trigger: AGGCCCGGGCCGCCGCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS TCA 90 bp | GTGGTTGGGACTGAGGTCTCAGGTCCTCCCTGTGAGCGGGGTCCCTaGCGAAGTCGGGTGAAGGTGCCAGCGTGCCCACCCAACCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVGTEVSGPPCERGP*RSRVKVPACPPNPC Trigger: GCAGGGGTTGGGTGGGCACGCTGGCACCTTCACCCGACTTCGTCAGGGACCCCGCTCACAGGGAGGACCTGAGACCTCAGTCCCAACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682478.1 ENST00000683576.1 |
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| CDS GCA 90 bp | GGTCAGCTCGGTATCCGAAAGATCTGCGTAGTTGTCCATGGCGGGTaGGGGCTCAGGCGGAGGCCTGGCGGCGGCCCGGGCCTACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQLGIRKICVVVHGG*GLRRRPGGGPGLPK Trigger: TTTTGGTAGGCCCGGGCCGCCGCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS GCA 90 bp | GTTGTACCGGCGCAGCAAGGTGGTCAGCTCGGTATCCGAAAGATCTaGGTAGTTGTCCATGGCGGGTGCGGGCTCAGGCGGAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVPAQQGGQLGIRKI*VVVHGGCGLRRRPG Trigger: GCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGTACAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS GCA 90 bp | GTTGATCCGGCGCAGCAAGGTGGTCAGCTCGGTATCCGAAAGATCTaGGTAGTTGTCCATGGCGGGTGCGGGCTCAGGCGGAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VDPAQQGGQLGIRKI*VVVHGGCGLRRRPG Trigger: GCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGATCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS CCA 90 bp | TGCAGAAGAGAGTCAGGGCGAGGGGACTGGCTGGCAGGGCCACCATaGCCCTGTCATGTCCCTCAGTCCAAACTTCCCCAGCCAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRESGRGDWLAGPP*PCHVPQSKLPQPVP Trigger: GGGGACTGGCTGGGGAAGTTTGGACTGAGGGACATGACAGGGCCATGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS-3UTR CAA 90 bp | GGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGGCCCGTGCGGGATGTaGTACCGGCGCAGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQPGLPQRPSSEAQTLMGPCGM*YRRSKV Trigger: CACCTTGCTGCGCCGGTACAACATCCCGCACGGGCC...CATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000369842.9 |
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| CDS CCA 90 bp | AAGCGTCAGCATCTGGGAATGAAGTCACTGACTGGCGGACAGCCCTaGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCCCTTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRQHLGMKSLTGGQP*TGRQTRAPHKSLAL Trigger: CAGAGCAAGGGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGTCAGTGACTTCATTCCCAGATGCTGACGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684082.1 |
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| CDS-3UTR CAA 90 bp | AAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCAGGCCCGTGCGGGATGTaGTACCGGCGCAGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KAVSQDFPKDLALKPRPSGPCGM*YRRSKV Trigger: CACCTTGCTGCGCCGGTACAACATCCCGCACGGGCC...TGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000369842.9 |
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| CDS CCA 90 bp | CGTCATCATGCACCTGCAGAAGAGAGTCAGGGCGAGGGGACTGGCTaGCAGGGCCACCATGGCCCTGTCATGTCCCTCAGTCCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHHAPAEESQGEGTG*QGHHGPVMSLSPNF Trigger: GAAGTTTGGACTGAGGGACATGACAGGGCCATGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGCATGATGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS-3UTR CAA 90 bp | AGGACCATGGAGGGCCTGAGTCTGCTGCCTCCCTGGTGGGACAAGGCAGGGGGACGTAAAGCCTACGAGTaGATCCTACTACAGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RTMEGLSLLPPWWDKAGGRKAYE*ILLQAR Trigger: ACGGGCCTGTAGTAGGATCAACTCGTAGGCTTTACG...TCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGACTCAGGCCCTCCATGGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS CCA 90 bp | AGATCGTCATCATGCACCTGCAGAAGAGAGTCAGGGCGAGGGGACTaGCTGGCAGGGCCACCATGGCCCTGTCATGTCCCTCAGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSCTCRRESGRGD*LAGPPWPCHVPQSK Trigger: TTTGGACTGAGGGACATGACAGGGCCATGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGCATGATGACGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS CCA 90 bp | AGTCTACTACAGGCCCGTGCGGGATGTTGTACCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAAGATCTGCGTAGTTGTCCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQARAGCCTGAAR*SARYPKDLRSCPWR Trigger: CCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000485261.1 |
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| CDS CCA 90 bp | ATCCTACTACAGGCCCGTGCGGGATGTTGTACCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAAGATCTGCGTAGTTGTCCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLQARAGCCTGAAR*SARYPKDLRSCPWR Trigger: CCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369842.9 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS TCA 90 bp | CCCTGGACGGGCCGGCAGACTCGGGCTCCCCATAAGTCCTGGTGGTaGAGTAGCTCTCTTCATAGTAGTCGTCATTGTAGCCTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PWTGRQTRAPHKSWW*SSSLHSSRHCSLGK Trigger: CTTCCCAAGGCTACAATGACGACTACTATGAAGAGAGCTACTTCACCACCAGGACTTATGGGGAGCCCGAGTCTGCCGGCCCGTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682478.1 ENST00000683576.1 |
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| CDS GCA 90 bp | AAACACAGCCGCGATCCCCTAGGTTGTACCCAAGTACAGGACGCCTaGCAGCCAGCTCACCTGGTGATGGAAAGCGTCAGCATCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: KHSRDPLGCTQVQDA*QPAHLVMESVSIWE Trigger: TTCCCAGATGCTGACGCTTTCCATCACCAGGTGAGCTGGCTGGCAGGCGTCCTGTACTTGGGTACAACCTAGGGGATCGCGGCTGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494443.5 |
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| CDS CCA 90 bp | CCCTCTGACCTTTGGTTAGAGGCCAGGAACCCACACCCTCCTGAATaGCTCTGGGTGTTCAGCCCTTTATCCATGGGGCCTTGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: PSDLWLEARNPHPPE*LWVFSPLSMGPCHL Trigger: CAAGTGGCAAGGCCCCATGGATAAAGGGCTGAACACCCAGAGCCATTCAGGAGGGTGTGGGTTCCTGGCCTCTAACCAAAGGTCAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS CCA 90 bp | GACCTTTGGTTAGAGGCCAGGAACCCACACCCTCCTGAATGGCTCTaGGTGTTCAGCCCTTTATCCATGGGGCCTTGCCACTTGTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: DLWLEARNPHPPEWL*VFSPLSMGPCHLCS Trigger: TGAGCACAAGTGGCAAGGCCCCATGGATAAAGGGCTGAACACCCAGAGCCATTCAGGAGGGTGTGGGTTCCTGGCCTCTAACCAAAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS-3UTR CAA 90 bp | CCCACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCGGGCGTTCCCTATCCTaGCACTCCTCTTCAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PTAKAVSQDFPKDLALKPGRSLS*HSSSEE Trigger: TTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCC...GGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS GCA 90 bp | CCAGAACCAGCCCGTCCCTGGGCTCCCCCACTACGCACCTATCCTTaGACTCCTCTTCAGAAGAAGACAAAAGATCGTCATCATGCACCT | + |
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Preference number: 5 (lower is better) Translates to: PEPARPWAPPLRTYP*TPLQKKTKDRHHAP Trigger: AGGTGCATGATGACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGTGCGTAGTGGGGGAGCCCAGGGACGGGCTGGTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000468294.5 ENST00000485261.1 ENST00000486738.5 |
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| CDS GCA 90 bp | TTGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCATCATGCACCTaGAGAAGAGAGTCAGGGCGAGGGGACTGGCTGGCAGGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LHSSSEEDKRSSSCT*RRESGRGDWLAGPP Trigger: TGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGCATGATGACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTGGGCGTTCCCTATCCTaGCACTCCTCTTCAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SQPGLPQRPSSEAQTLMAGRSLS*HSSSEE Trigger: TTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCC...AGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CAA 90 bp | CCCACCCCCACTGCTAAGGCAGTCAGCCAGGACTTCCCCAAAGACCTAGCTCTGAAAGCGTCCTCTTTCTaGGGAAGATCATACATATCT | + |
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Preference number: 5 (lower is better) Translates to: PTPTAKAVSQDFPKDLALKASSF*GRSYIS Trigger: AGATATGTATGATCTTCCCAAGAAAGAGGACGCTTT...CAGAGCTAGGTCTTTGGGGAAGTCCTGGCTGACTGCCTTAGCAGTGGGGGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CAA 90 bp | AGCCAGGACTTCCCCAAAGACCTAGCTCTGAAGCCCAGACCCTCATGGCTCCCTAAAGCGTCCTCTTTCTaGGGAAGATCATACATATCT | + |
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Preference number: 5 (lower is better) Translates to: SQDFPKDLALKPRPSWLPKASSF*GRSYIS Trigger: AGATATGTATGATCTTCCCAAGAAAGAGGACGCTTT...AGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGGTCTTTGGGGAAGTCCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 |
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| CDS-3UTR CAA 90 bp | TTCTTGGGAAGATCATACATATCTGCATCCCCTCTAGTCGAATTCAAGTCAGAGCGTAAAGCCTACGAGTaGATCCGGCGCAGCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FLGRSYISASPLVEFKSERKAYE*IRRSKV Trigger: CACCTTGCTGCGCCGGATCAACTCGTAGGCTTTACG...CTCTGACTTGAATTCGACTAGAGGGGATGCAGATATGTATGATCTTCCCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CAA 90 bp | TTCTTGGGAAGATCATACATATCTGCATCCCCTCTAGTCGAATTCAAGTCAGAGGGGCGTTCCCTATCCTaGCACTCCTCTTCAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: FLGRSYISASPLVEFKSEGRSLS*HSSSEE Trigger: TTCTTCTGAAGAGGAGTGCAAGGATAGGGAACGCCC...CTCTGACTTGAATTCGACTAGAGGGGATGCAGATATGTATGATCTTCCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428228.5 |
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| CDS-3UTR CAA 90 bp | ATGACAAAAGGAGGAATGCATGTCAACAAAATGACAAAGAGGACCATGGAGGGCAAAGCGTCCTCTTTCTaGGGAAGATCATACATATCT | + |
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Preference number: 5 (lower is better) Translates to: MTKGGMHVNKMTKRTMEGKASSF*GRSYIS Trigger: AGATATGTATGATCTTCCCAAGAAAGAGGACGCTTT...GCCCTCCATGGTCCTCTTTGTCATTTTGTTGACATGCATTCCTCCTTTTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369842.9 |
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| CDS GCA 72 bp | GCGGCCCGGGCCTACCAAAACCGGCCGAGCAACGGCTaGCGAGGAGCACGGCGGGGGCGGCACGAGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: AARAYQNRPSNG*RGARRGRHERI Trigger: GATGCGCTCGTGCCGCCCCCGCCGTGCTCCTCGGCAGCCGTTGCTCGGCCGGTTTTGGTAGGCCCGGGCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000486738.5 |
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| CDS GCA 72 bp | GGTATCCGAAAGATCTGCGTAGTTGTCCATGGCGGGTaGGGGCTCAGGCGGAGGCCTGGCGGCGGCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GIRKICVVVHGG*GLRRRPGGGPG Trigger: GCCCGGGCCGCCGCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS CAA 90 bp | CACGAGCGCATCGGGAGCGGCCGCGCTCGCGTCACAGCCGAATCGTaGTCGCGTCACAGCCGAATCGTTGTCGCGTCACGGCCGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HERIGSGRARVTAES*SRHSRIVVASRPLA Trigger: AGCCAGCGGCCGTGACGCGACAACGATTCGGCTGTGACGCGACAACGATTCGGCTGTGACGCGAGCGCGGCCGCTCCCGATGCGCTCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000369842.9 |
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| CDS TCA 72 bp | ACTGAGGTCTCAGGTCCTCCCTGTGAGCGGGGTCCCTaGCGAAGTCGGGTGAAGGTGCCAGCGTGCCCACCC | + |
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Preference number: 6 (lower is better) Translates to: TEVSGPPCERGP*RSRVKVPACPP Trigger: GGGTGGGCACGCTGGCACCTTCACCCGACTTCGTCAGGGACCCCGCTCACAGGGAGGACCTGAGACCTCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682478.1 ENST00000683576.1 |
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| CDS CCA 72 bp | TCAGCTCGGTATCCGAAAGATCTGCGTAGTTGTCCATaGCGGGTGCGGGCTCAGGCGGAGGCCTGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SARYPKDLRSCP*RVRAQAEAWRR Trigger: CCGCCGCCAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS CCA 72 bp | TGGGCCAGGAGCCTGGACCCAGAACCAGCCCGTCCCTaGGCTCCCCCACTACGCACCTATCCTTGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: WARSLDPEPARP*APPLRTYPCTP Trigger: AGGAGTGCAAGGATAGGTGCGTAGTGGGGGAGCCCAGGGACGGGCTGGTTCTGGGTCCAGGCTCCTGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000468294.5 ENST00000485261.1 ENST00000486738.5 |
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| CDS CCA 72 bp | GCACCTGCAGAAGAGAGTCAGGGCGAGGGGACTGGCTaGCAGGGCCACCATGGCCCTGTCATGTCCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: APAEESQGEGTG*QGHHGPVMSLS Trigger: ACTGAGGGACATGACAGGGCCATGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS GCA 72 bp | GCGCAGCAAGGTGGTCAGCTCGGTATCCGAAAGATCTaGGTAGTTGTCCATGGCGGGTGCGGGCTCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AQQGGQLGIRKI*VVVHGGCGLRR Trigger: CCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000428228.5 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 |
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| CDS CCA 72 bp | TCATGCACCTGCAGAAGAGAGTCAGGGCGAGGGGACTaGCTGGCAGGGCCACCATGGCCCTGTCATGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SCTCRRESGRGD*LAGPPWPCHVP Trigger: AGGGACATGACAGGGCCATGGTGGCCCTGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGCATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS CCA 72 bp | GCAGCGGTAGCAGAGGGGGCATCGGTGTGCCCCGCCTaGCCTGATGGCCCTAATCTGAATCCCATTTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AAVAEGASVCPA*PDGPNLNPISG Trigger: TCCCGAAATGGGATTCAGATTAGGGCCATCAGGCCAGGCGGGGCACACCGATGCCCCCTCTGCTACCGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682478.1 ENST00000683576.1 |
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| CDS CAA 90 bp | TCTGGGTCTCGTACTCGAAGATCTTCTTCTCGTAAAGCCTACGAGTaGATCCTGGCCGGACACGGGGCGGTCAGGGCCGCGGGCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SGSRTRRSSSRKAYE*ILAGHGAVRAAGRG Trigger: TCCCCGGCCCGCGGCCCTGACCGCCCCGTGTCCGGCCAGGATCAACTCGTAGGCTTTACGAGAAGAAGATCTTCGAGTACGAGACCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492448.1 |
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| CDS TCA 72 bp | GTACTCGAAGATCTTCTTCTCGTAAAGCCTACGAGTTaGTCCTGGCCGGACACGGGGCGGTCAGGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: VLEDLLLVKPTS*SWPDTGRSGPR Trigger: CCGCGGCCCTGACCGCCCCGTGTCCGGCCAGGATCAACTCGTAGGCTTTACGAGAAGAAGATCTTCGAGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492448.1 |
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| CDS GCA 72 bp | CGCGATCCCCTAGGTTGTACCCAAGTACAGGACGCCTaGCAGCCAGCTCACCTGGTGATGGAAAGCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RDPLGCTQVQDA*QPAHLVMESVS Trigger: GCTGACGCTTTCCATCACCAGGTGAGCTGGCTGGCAGGCGTCCTGTACTTGGGTACAACCTAGGGGATCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494443.5 |
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| CDS CAA 72 bp | CGTACTCGAAGATCTTCTTCTCGTAAAGCCTACGAGTaGATCCTGGCCGGACACGGGGCGGTCAGGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RTRRSSSRKAYE*ILAGHGAVRAA Trigger: CGCGGCCCTGACCGCCCCGTGTCCGGCCAGGATCAACTCGTAGGCTTTACGAGAAGAAGATCTTCGAGTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492448.1 |
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| CDS CAA 90 bp | TTCGGGACCTGTAACAGTTTCTCCCTCCTAAGGCTGCTGGAGTGGTaGGGACTGAGGTCTCAGGTCCTCCCTGTGAGCGGGGTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FGTCNSFSLLRLLEW*GLRSQVLPVSGVPD Trigger: GTCAGGGACCCCGCTCACAGGGAGGACCTGAGACCTCAGTCCCAACCACTCCAGCAGCCTTAGGAGGGAGAAACTGTTACAGGTCCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682478.1 ENST00000683576.1 |
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| CDS TCA 72 bp | TGTCCCTCAGTCCAAACTTCCCCAGCCAGTCCCCTCTaGCCTTTGGTTAGAGGCCAGGAACCCACACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CPSVQTSPASPL*PLVRGQEPTPS Trigger: GGAGGGTGTGGGTTCCTGGCCTCTAACCAAAGGTCAGAGGGGACTGGCTGGGGAAGTTTGGACTGAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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| CDS CCA 72 bp | CAGGCCCGTGCGGGATGTTGTACCGGCGCAGCAAGGTaGTCAGCTCGGTATCCGAAAGATCTGCGTAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QARAGCCTGAAR*SARYPKDLRSC Trigger: ACAACTACGCAGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000369835.3 ENST00000369842.9 ENST00000485261.1 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 ENST00000683627.1 ENST00000684082.1 ENST00000684678.1 |
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| CDS CAA 72 bp | CTACGAGTTGATCCTACTACAGGCCCGTGCGGGATGTaGTACCGGCGCAGCAAGGTGGTCAGCTCGGTATCC | + |
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Preference number: 6 (lower is better) Translates to: LRVDPTTGPCGM*YRRSKVVSSVS Trigger: GGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGGATCAACTCGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000369842.9 ENST00000486738.5 ENST00000494443.5 ENST00000682114.1 ENST00000683627.1 ENST00000684082.1 |
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| CDS GCA 72 bp | TCCCCTCTAGTCGAATTCAAGTCTACTACAGGCCCGTaGGGGATGTTGTACCGGCGCAGCAAGGTGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLVEFKSTTGP*GMLYRRSKVVS Trigger: GCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGACTTGAATTCGACTAGAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000485261.1 |
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| CDS CCA 72 bp | CACTACTCTGGGCTAGCTCTGAAGCCCAGACCCTCATaGCTCCCTCTAGAAGGGGTTGCCTTCTTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HYSGLALKPRPS*LPLEGVAFFSL Trigger: CAGGCTGAAGAAGGCAACCCCTTCTAGAGGGAGCCATGAGGGTCTGGGCTTCAGAGCTAGCCCAGAGTAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683627.1 |
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| CDS CAA 72 bp | GTCGAATTCAAGTCTACTACAGGCCCGTGCGGGATGTaGTACCGGCGCAGCAAGGTGGTCAGCTCGGTATCC | + |
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Preference number: 6 (lower is better) Translates to: VEFKSTTGPCGM*YRRSKVVSSVS Trigger: GGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGACTTGAATTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000485261.1 |
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| CDS CAA 90 bp | CCCAGAACCAGCCCGTCCCTGGGCTCCCCCACTACGCACCTATCCTaGCACTCCTCTTCAGAAGAAGACAAAAGATCGTCATCATGCACC | + |
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Preference number: 6 (lower is better) Translates to: PRTSPSLGSPTTHLS*HSSSEEDKRSSSCT Trigger: GGTGCATGATGACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGTGCGTAGTGGGGGAGCCCAGGGACGGGCTGGTTCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000468294.5 ENST00000485261.1 ENST00000486738.5 |
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| CDS TCA 72 bp | CCCAAGTACAGGACGCCTGCCAGCCAGCTCACCTGGTaGTGGAAAGCGTCAGCATCTGGGAATGAAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: PKYRTPASQLTW*WKASASGNEVT Trigger: AGTGACTTCATTCCCAGATGCTGACGCTTTCCATCACCAGGTGAGCTGGCTGGCAGGCGTCCTGTACTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494443.5 |
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| CDS CAA 72 bp | CCTGGATTTATCCAAACACAGCCGCGATCCCCTAGGTaGTACCCAAGTACAGGACGCCTGCCAGCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGFIQTQPRSPR*YPSTGRLPASS Trigger: TGAGCTGGCTGGCAGGCGTCCTGTACTTGGGTACAACCTAGGGGATCGCGGCTGTGTTTGGATAAATCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494443.5 |
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| CDS CAA 90 bp | TCCCCTCTAGTCGAATTCAAGTCTACTACAGGCCCGTGCGGGATGTaGTACCGGCGCAGCAAGGTGGTCAGCTCGGTATCCGAAAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLVEFKSTTGPCGM*YRRSKVVSSVSERS Trigger: AGATCTTTCGGATACCGAGCTGACCACCTTGCTGCGCCGGTACAACATCCCGCACGGGCCTGTAGTAGACTTGAATTCGACTAGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369835.3 ENST00000485261.1 |
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| CDS GCA 72 bp | GCCCGTCCCTGGGCTCCCCCACTACGCACCTATCCTTaGACTCCTCTTCAGAAGAAGACAAAAGATCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ARPWAPPLRTYP*TPLQKKTKDRH Trigger: ATGACGATCTTTTGTCTTCTTCTGAAGAGGAGTGCAAGGATAGGTGCGTAGTGGGGGAGCCCAGGGACGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000468294.5 ENST00000485261.1 ENST00000486738.5 |
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| CDS GCA 72 bp | TCTTCAGAAGAAGACAAAAGATCGTCATCATGCACCTaGAGAAGAGAGTCAGGGCGAGGGGACTGGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSEEDKRSSSCT*RRESGRGDWLA Trigger: TGCCAGCCAGTCCCCTCGCCCTGACTCTCTTCTGCAGGTGCATGATGACGATCTTTTGTCTTCTTCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471965.1 |
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