RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF4G2 (Homo sapiens)

Ensembl gene IDs: ENSG00000110321

Ensembl transcript IDs: ENST00000339995.11, ENST00000396525.7, ENST00000524932.6, ENST00000525606.5, ENST00000525681.6, ENST00000525972.5, ENST00000525995.1, ENST00000526148.6, ENST00000527015.1, ENST00000527419.6, ENST00000527526.6, ENST00000528562.6, ENST00000528839.1, ENST00000530211.6, ENST00000530564.1, ENST00000530702.2, ENST00000531180.1, ENST00000531416.6, ENST00000531507.5, ENST00000531647.6, ENST00000532082.6, ENST00000532152.5, ENST00000532349.1, ENST00000532383.5, ENST00000532570.6, ENST00000533485.1, ENST00000534246.1, ENST00000534272.1, ENST00000534470.1, ENST00000534605.1

Found 579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCGTCTGAATGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAG +
Preference number: 1 (lower is better)
Translates to: EASECGALLLSWLTL*CWAIKVWCIFCQSQ
Trigger: CTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACATTCAGACGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR GCA 90 bp GCGTCTGAATGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTaGTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAGACA +
Preference number: 1 (lower is better)
Translates to: ASECGALLLSWLTLC*WAIKVWCIFCQSQT
Trigger: TGTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACATTCAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR TCA 90 bp CAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCA +
Preference number: 1 (lower is better)
Translates to: QVLQVGPYPFSSWVA*TVPPERSHFSSLEP
Trigger: TGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CCA 90 bp TCCGCTACCTGGCATTTGTCCAAACATATCAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTC +
Preference number: 1 (lower is better)
Translates to: SATWHLSKHISKSSK*VPIHFHPGWHERSL
Trigger: GAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGACAAATGCCAGGTAGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CCA 90 bp ATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTG +
Preference number: 1 (lower is better)
Translates to: ISKSSKWVPIHFHPG*HERSLQKEVTSHPL
Trigger: CAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CAA 90 bp TTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATCGCAGACATAGCTGAGCATACAGTG +
Preference number: 2 (lower is better)
Translates to: FASVLVDPLLLGHQS*VHLLPIADIAEHTV
Trigger: CACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR-3UTR TCA 90 bp CTCTCCAAACTGCGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAACGTCCCATGGTGGGTaGAAATCTATCCTGGATAAC +
Preference number: 2 (lower is better)
Translates to: LSKLRLCGRHDVSPMAIETSHGG*KSILDN
Trigger: GTTATCCAGGATAGATTTTCACCCACCATGGGACGT...TTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR-3UTR CCA 90 bp GGTGAAAATCTATCCTGGATAACTCCTGGACCAGTACCAATTCCGCTACCTGGCCATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GENLSWITPGPVPIPLPGHFHPG*HERSLQ
Trigger: CTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG...GCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR-3UTR TCA 90 bp TGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTAATCGCAGACATAGCTaGGCATACAGTGAGCTATAC +
Preference number: 2 (lower is better)
Translates to: CGALLLSWLTLCCWAIKVNRRHS*AYSELY
Trigger: GTATAGCTCACTGTATGCTCAGCTATGTCTGCGATT...AACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR-3UTR TCA 90 bp ATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAATCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATA +
Preference number: 2 (lower is better)
Translates to: ISKSSKWVPIHFHPGWHESLLIP*AIGAGI
Trigger: TATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGA...TTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR-3UTR CCA 90 bp CTATCCTGGATAACTCCTGGACCAGTACCAATTCCGCTACCTGGCATTTGTCCAAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCAT +
Preference number: 2 (lower is better)
Translates to: LSWITPGPVPIPLPGICPSKSSK*VPIHFH
Trigger: ATGAAAATGGATAGGGACCCACTTGGAGGACTTGCT...TGGACAAATGCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CAA 90 bp AGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATaGAGGAGCTCAAGGCATAGCTTGTCAAACTTTTCAGGAGTAAGC +
Preference number: 2 (lower is better)
Translates to: SSMTPLRMSLDSTPT*RSSRHSLSNFSGVS
Trigger: GCTTACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528562.6
3UTR-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGCAAAGAAGGTCCTTaGAATAGACTGCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSKEGP*NRLPLL
Trigger: AAGCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAGCAAAGAAGGTCCTTaGAATAGACTGCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSKEGP*NRLPLL
Trigger: AAGCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAACATTACAGCGGAATaGATTTTCGCAGTGGTTAGG +
Preference number: 2 (lower is better)
Translates to: HFKGINDLSKLISFVQVNNITAE*IFAVVR
Trigger: CCTAACCACTGCGAAAATTCATTCCGCTGTAATGTT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGTCCTTGCAATAGACTaGCTCTGCTTGAGAACTTAT +
Preference number: 2 (lower is better)
Translates to: HFKGINDLSKLISFVQVNVLAID*LCLRTY
Trigger: ATAAGTTCTCAAGCAGAGGCAGTCTATTGCAAGGAC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAAAGACTTGTGCACTTaGCCAGGCTCAAGGATATTA +
Preference number: 2 (lower is better)
Translates to: HFKGINDLSKLISFVQVNKDLCT*PGSRIL
Trigger: TAATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAAAGACTTGTGCACTTaGCCAGGCTCAAGGATATTA +
Preference number: 2 (lower is better)
Translates to: NHFKGINDLSKLISFVQVKDLCT*PGSRIL
Trigger: TAATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAATGAATTTTCGCAGTaGTTAGGTCAAATGCAGTTA +
Preference number: 2 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNEFSQ*LGQMQL
Trigger: TAACTGCATTTGACCTAACCACTGCGAAAATTCATT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR CCA 72 bp GGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTaGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCG +
Preference number: 3 (lower is better)
Translates to: GALLLSWLTLCC*AIKVWCIFCQS
Trigger: CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR GCA 72 bp TGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTaGTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: CGALLLSWLTLC*WAIKVWCIFCQ
Trigger: TTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR GCA 72 bp GAATGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGC +
Preference number: 3 (lower is better)
Translates to: ECGALLLSWLTL*CWAIKVWCIFC
Trigger: GCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
3UTR TCA 72 bp CAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGAAGTCACTTCTCATCC +
Preference number: 3 (lower is better)
Translates to: QVGPYPFSSWVA*TVPPERSHFSS
Trigger: GGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CCA 72 bp TCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCT +
Preference number: 3 (lower is better)
Translates to: SSKWVPIHFHPG*HERSLQKEVTS
Trigger: AGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CCA 72 bp TGGCATTTGTCCAAACATATCAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCATCCTGGGTGGCATGAA +
Preference number: 3 (lower is better)
Translates to: WHLSKHISKSSK*VPIHFHPGWHE
Trigger: TTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGACAAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR-3UTR CAA 90 bp GTCCACAATCAGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTA +
Preference number: 3 (lower is better)
Translates to: VHNQQYDPFKDEFRLYTHSSRHS*SNFSGV
Trigger: TACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCT...GTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTGATTGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528562.6
3UTR-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAAAAGACTTGTGCACTaGCCCAGGCTCAAGGATATT +
Preference number: 3 (lower is better)
Translates to: NHFKGINDLSKLISFVQVKRLVH*PRLKDI
Trigger: AATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAAAAGACTTGTGCACTaGCCCAGGCTCAAGGATATT +
Preference number: 3 (lower is better)
Translates to: HFKGINDLSKLISFVQVNKRLVH*PRLKDI
Trigger: AATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR CCA 72 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTaGTTAGGTCAAATGCAGTTACATCATAGCAACAGT +
Preference number: 3 (lower is better)
Translates to: IVKTLQRNEFSQ*LGQMQLHHSNS
Trigger: ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp GCGTCTGAATGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCGCTTTGCTTCTGTCCTaGTTGACCCTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASECGALLLSWLTLCCWAALLLS*LTLCCW
Trigger: CCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGC...GGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACATTCAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR GCA 90 bp CCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGACCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: PSGSLSIFILGGMNGPSRPISPN*DCVGGM
Trigger: CATGCCTCCCACACAATCGCAGTTTGGAGAGATGGG...TCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
3UTR CAA 72 bp GTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATCGCAGACATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLVDPLLLGHQS*VHLLPIADIAE
Trigger: CTCAGCTATGTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR TCA 90 bp CTCTCCAAACTGCGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAGCAGGAATCCATTTCTaGGCGTTTTGCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LSKLRLCGRHDVSPMAIEAGIHF*AFCPGV
Trigger: AACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGC...TTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp CAGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCCACTCGGTACCCGCTaGCACCTCCATAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQYDPFKDEFRLYTHIEEPLGTR*HLHRAP
Trigger: CGGAGCTCTATGGAGGTGGCAGCGGGTACCGAGTGG...CTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp TTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATAGCTTGCAGAGGAGTCGCTGCTaGAGCCGCCACTCGGTACCC +
Preference number: 4 (lower is better)
Translates to: LRMSLDSTPTLRSSRHSLQRSRC*SRHSVP
Trigger: GGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTG...CAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp CCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGATGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: PSGSLSIFILGGMNGPSRCGVVC*GVVISS
Trigger: AGACGAGATGACAACTCCGCAGCAAACAACTCCGCA...TCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp GAGGCGTCTGAATGTGGTGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTaGATCTTCTGCCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: EASECGALLLSWLTLCCWAIKVW*IFCQSQ
Trigger: CTGCGATTGGCAGAAGATGCACCAAACTTTGATGGC...CCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCACCACATTCAGACGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR GCA 90 bp TTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLLSWLTLCCWAIKVWCISWLTL*CWAIKV
Trigger: AACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGA...GATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR TCA 90 bp TCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SIFILGGMNGPSRKKSLLSSWVA*TVPPER
Trigger: TCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGA...GAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp GCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: ASPPSGSLSIFILGGMNGRSTPF*NRTLHF
Trigger: AAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCT...ACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp GGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAA +
Preference number: 4 (lower is better)
Translates to: GSLSIFILGGMNGPSRKKSHSPL*RLDNEE
Trigger: TTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGA...CTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp CGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCAGGAATTGTTGCCAGCAGTCTTaGGATAGTGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RSLQKEVTSHPLSHRSRNCCQQS*DSAEVH
Trigger: GTGCACCTCAGCACTATCCCAAGACTGCTGGCAACA...ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp GACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAGACTGGGCCATCAAAGTTTaGTGCATCTTCTGCCAATCG +
Preference number: 4 (lower is better)
Translates to: DPLLLGHQSLVHLLPIADWAIKV*CIFCQS
Trigger: CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCA...GTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR CCA 90 bp CTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAGACATAGCTGAGTTGACCCTCTGCTGCTaGGCCATCAAAGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLGHQSLVHLLPIADIAELTLCC*AIKVWC
Trigger: GCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAA...CTCAGCTATGTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR CCA 90 bp CATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCCATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HERSLQKEVTSHPLSHRSHFHPG*HERSLQ
Trigger: CTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG...GCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR TCA 90 bp GACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAGACAATCGCAGACATAGCTaGGCATACAGTGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: DPLLLGHQSLVHLLPIADNRRHS*AYSELY
Trigger: GTATAGCTCACTGTATGCTCAGCTATGTCTGCGATT...GTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR TCA 90 bp GCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTGTCCCCCATGGCCATTaGAGAGTTGATTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: ASPPSGSLSIFILGGMNGVPHGH*RVDLND
Trigger: ATCGTTCAAATCAACTCTTCAATGGCCATGGGGGAC...ACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp CTATCCTGGATAACTCCTGGACCAGTACCAATTCCGCTACCTGGCATTTGTCCACCAGGAACTCGCTGTTaGCAGCAGTCTTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: LSWITPGPVPIPLPGICPPGTRC*QQSWDS
Trigger: ACTATCCCAAGACTGCTGGCAACAGCGAGTTCCTGG...TGGACAAATGCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp CGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCAGGAATGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: RSLQKEVTSHPLSHRSRNVCGVV*CGVVIS
Trigger: CGAGATGACAACTCCGCAGCAAACAACTCCGCAAAC...ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR TCA 90 bp CGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCAGGAATACGTCCCATGGTGGGTaGAAATCTATCCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: RSLQKEVTSHPLSHRSRNTSHGG*KSILDN
Trigger: GTTATCCAGGATAGATTTTCACCCACCATGGGACGT...ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACAGAGGAGTCGCTGCTaGAGCCGCCACTCGGTACCC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVQRSRC*SRHSVP
Trigger: GGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339995.11
CDS-3UTR CCA 90 bp GGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: GWHERSLQKEVTSHPLSHSKSSK*VPIHFH
Trigger: ATGAAAATGGATAGGGACCCACTTGGAGGACTTGCT...ATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp CATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCATCCTGGATAACTCCTaGACCAGTACCAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: HERSLQKEVTSHPLSHRSILDNS*TSTNSA
Trigger: AGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGAT...GCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCCCGTGGAGAGCTCGTaGAAAGACGCGCGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNPVESS*KDAREG
Trigger: CCCCTCTCGCGCGTCTTTCCACGAGCTCTCCACGGG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR TCA 90 bp TCTCCAAACTGCGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAGATTGAAGAGTTGATTTaGACGATGACGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: SPNCDCVGGMMCPPWPLKIEELI*TMTSHG
Trigger: ACCATGGGACGTCATCGTTCAAATCAACTCTTCAAT...CTTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCACTCGGTACCCGCTaGCACCTCCATAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPLGTR*HLHRAP
Trigger: CGGAGCTCTATGGAGGTGGCAGCGGGTACCGAGTGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339995.11
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCTCAGAGGAGTCGCTaGTGCAGCCGCCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAQRSR*CSRHSV
Trigger: TACCGAGTGGCGGCTGCAGCAGCGACTCCTCTGAGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339995.11
CDS-3UTR GCA 90 bp TCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCATCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLSIFILGGMNGPSRKKSSSSAS*RNPFLS
Trigger: GCTCAGAAATGGATTCCTGCACGAAGCACTAGACGA...TGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR GCA 90 bp AAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAATCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: KWVPIHFHPGWHERSLQKSFFFV*GVVCCG
Trigger: TCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGA...TTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp TCCAAACTGCGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAGAGACCAATTCCGCTACCTaGCATTTGTCCAAACATATC +
Preference number: 4 (lower is better)
Translates to: SKLRLCGRHDVSPMAIEETNSAT*HLSKHI
Trigger: GATATGTTTGGACAAATGCCAGGTAGCGGAATTGGT...CTCTTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp TCCAAACTGCGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAGAGGGTGAAAATCTATCCTaGATAACTCCTGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: SKLRLCGRHDVSPMAIEEGENLS*ITPGPV
Trigger: TACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC...CTCTTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTCGCCTCCTCCCCGTaGAGAGCTCGTGGAAAGACG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFASSP*RARGKT
Trigger: CGTCTTTCCACGAGCTCTCCACGGGGAGGAGGCGAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGACCAGGGCCACAACATaGCAGCAGGAACCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQTRATT*QQEPPP
Trigger: GGGCGGAGGTTCCTGCTGCCATGTTGTGGCCCTGGT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCCCAGAGGTGGTGTTTaGGTGCGTGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSPRGGV*VRGGCA
Trigger: TGCACAACCACCACGCACTCAAACACCACCTCTGGG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCCCAGAGGTGGTGTTTaGGTGCGTGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSPRGGV*VRGGCA
Trigger: TGCACAACCACCACGCACTCAAACACCACCTCTGGG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCATCCTCTTACTTTCCTaGAGATTGCATCATGTCGTT +
Preference number: 4 (lower is better)
Translates to: LLLSWLTLCCWAIKVWCIILLLS*RLHHVV
Trigger: AACGACATGATGCAATCTTCAGGAAAGTAAGAGGAT...GATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR CCA 90 bp AGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATAGCTTGTCATCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAA +
Preference number: 4 (lower is better)
Translates to: RMSLDSTPTLRSSRHSLSSHSPL*RLDNEE
Trigger: TTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGA...TGACAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CCA 90 bp TCCAAACATATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGGATGACGTCCCATGGTaGGTGAAAATCTATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SKHISKSSKWVPIHFHPGDDVPW*VKIYPG
Trigger: TCCAGGATAGATTTTCACCCACCATGGGACGTCATC...CCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR TCA 90 bp CAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAGGGGACAGGAGAAATaGAATACCTTCACCGAGAAC +
Preference number: 4 (lower is better)
Translates to: QYDPFKDEFRLYTHIEELRGQEK*NTFTEN
Trigger: GTTCTCGGTGAAGGTATTTCATTTCTCCTGTCCCCT...GAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR TCA 90 bp TATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGACTCTACACCCACATTaGGGAGCTCAAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: YDPFKDEFRLYTHIEELKTLHPH*GAQGIA
Trigger: AGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGT...CTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSWVA*TVPPER
Trigger: TCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCCAGAGGTGGTGTTTaGGTGCGTGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPRGGV*VRGGCA
Trigger: TGCACAACCACCACGCACTCAAACACCACCTCTGGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCCCAGAGGTGGTGTTTaGGTGCGTGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQPRGGV*VRGGCA
Trigger: TGCACAACCACCACGCACTCAAACACCACCTCTGGG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGGCCAGCGACTAGATaGGGTCTCTCCGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSRPATR*GLSESS
Trigger: AGAGCTTTCGGAGAGACCTCATCTAGTCGCTGGCCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR GCA 90 bp CTATACTTTGGCTCTTCTAGGGCTTTGTCCACAATCAGCAGTATGACCCCTTTAAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: LYFGSSRALSTISSMTPLRSTPF*NRTLHF
Trigger: AAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCT...TAAAGGGGTCATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp TATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGTGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: YDPFKDEFRLYTHIEELKCGVVC*GVVISS
Trigger: AGACGAGATGACAACTCCGCAGCAAACAACTCCGCA...CTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp GAGCTATACTTTGGCTCTTCTAGGGCTTTGTCCACAATCAGCAGTATGACCCCTTCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: ELYFGSSRALSTISSMTPSFFFV*GVVCCG
Trigger: TCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGA...AGGGGTCATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATACAGGACTAGCACTTaGAGGCGGAAGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVYRTST*RRKTRA
Trigger: GGCCCTGGTCTTCCGCCTGCAAGTGCTAGTCCTGTA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGCTTTGCTTCTGTCCTaGTTGACCCTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSALLLS*LTLCCW
Trigger: CCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATAACGATGACGTCCCATaGTGGGTGAAAATCTATCCT +
Preference number: 4 (lower is better)
Translates to: HFHPGWHERSLQKEVTSHNDDVP*WVKIYP
Trigger: AGGATAGATTTTCACCCACCATGGGACGTCATCGTT...ATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGTCTGTCCCAGAGGTaGTGTTTGAGTGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCLSQR*CLSAWW
Trigger: CCACCACGCACTCAAACACCACCTCTGGGACAGACA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGCAGGAATCCATTTCTaGGCGTTTTGCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSAGIHF*AFCPGV
Trigger: AACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSSWVA*TVPPER
Trigger: TCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCATCCTGGGTGGCATaGACGGTCCCTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSSWVA*TVPPER
Trigger: TCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGTTTTGAGACCAAGCTaGGGTGTCTGTCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSVLRPS*GVCPRG
Trigger: ACCTCTGGGACAGACACCTCAGCTTGGTCTCAAAAC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGTTTTGAGACCAAGCTaGGGTGTCTGTCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSVLRPS*GVCPRG
Trigger: ACCTCTGGGACAGACACCTCAGCTTGGTCTCAAAAC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAATGCTCACCAGCTCTaGAATGATGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNAHQL*NDGTSC
Trigger: GCAGCTCGTGCCATCATTTCAGAGCTGGTGAGCATT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGGAAGGAGCAGAGGATaGATCTGTTTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSGRSRG*ICFIAG
Trigger: CCCAGCGATGAAACAGATTCATCCTCTGCTCCTTCC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACAATCAGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: HNQQYDPFKDEFRLYTHIVCGVV*CGVVIS
Trigger: CGAGATGACAACTCCGCAGCAAACAACTCCGCAAAC...AATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSWLTL*CWAIKV
Trigger: AACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSPISPN*DCVGGM
Trigger: CATGCCTCCCACACAATCGCAGTTTGGAGAGATGGG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGTTGCCAGCAGTCTTaGGATAGTGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSCCQQS*DSAEVH
Trigger: GTGCACCTCAGCACTATCCCAAGACTGCTGGCAACA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGTTGCCAGCAGTCTTaGGATAGTGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCCQQS*DSAEVH
Trigger: GTGCACCTCAGCACTATCCCAAGACTGCTGGCAACA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTGACCCTCTGCTGCTaGGCCATCAAAGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLTLCC*AIKVWC
Trigger: GCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTGACCCTCTGCTGCTaGGCCATCAAAGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLTLCC*AIKVWC
Trigger: GCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCTTTGCTTCTGTCCTaGTTGACCCTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVALLLS*LTLCCW
Trigger: CCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGCTTTGCTTCTGTCCTaGTTGACCCTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQALLLS*LTLCCW
Trigger: CCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSHFHPG*HERSLQ
Trigger: CTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGGTGTTTGAGTGCGTaGTGGTTGTGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSWCLSA*WLCTRR
Trigger: CCTCCTAGTGCACAACCACCACGCACTCAAACACCA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGGTGTTTGAGTGCGTaGTGGTTGTGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSWCLSA*WLCTRR
Trigger: CCTCCTAGTGCACAACCACCACGCACTCAAACACCA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTGTCTGTCCCAGAGGTaGTGTTTGAGTGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNCLSQR*CLSAWW
Trigger: CCACCACGCACTCAAACACCACCTCTGGGACAGACA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGTCTGTCCCAGAGGTaGTGTTTGAGTGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCLSQR*CLSAWW
Trigger: CCACCACGCACTCAAACACCACCTCTGGGACAGACA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGTCTGTCCCAGAGGTaGTGTTTGAGTGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQCLSQR*CLSAWW
Trigger: CCACCACGCACTCAAACACCACCTCTGGGACAGACA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCAGGAATCCATTTCTaGGCGTTTTGCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAGIHF*AFCPGV
Trigger: AACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGCAGGAATCCATTTCTaGGCGTTTTGCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQAGIHF*AFCPGV
Trigger: AACCCCAGGGCAAAACGCTCAGAAATGGATTCCTGC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCACTCTACACCCACATTaGGGAGCTCAAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSTLHPH*GAQGIA
Trigger: AGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTCATTAGGAACGACTaGGCAGGCCTCAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSFIRND*AGLRLI
Trigger: GATTAGCCTGAGGCCTGCTCAGTCGTTCCTAATGAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTCATTAGGAACGACTaGGCAGGCCTCAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFIRND*AGLRLI
Trigger: GATTAGCCTGAGGCCTGCTCAGTCGTTCCTAATGAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGTTTTGAGACCAAGCTaGGGTGTCTGTCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVVLRPS*GVCPRG
Trigger: ACCTCTGGGACAGACACCTCAGCTTGGTCTCAAAAC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGTTTTGAGACCAAGCTaGGGTGTCTGTCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNVLRPS*GVCPRG
Trigger: ACCTCTGGGACAGACACCTCAGCTTGGTCTCAAAAC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCACCAGCTCTGAAATaGTGGCACGAGCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSPALK*WHELQT
Trigger: AGTTTGCAGCTCGTGCCATCATTTCAGAGCTGGTGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAATGCTCACCAGCTCTaGAATGATGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNNAHQL*NDGTSC
Trigger: GCAGCTCGTGCCATCATTTCAGAGCTGGTGAGCATT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAATGCTCACCAGCTCTaGAATGATGGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNAHQL*NDGTSC
Trigger: GCAGCTCGTGCCATCATTTCAGAGCTGGTGAGCATT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGGAAGGAGCAGAGGATaGATCTGTTTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVGRSRG*ICFIAG
Trigger: CCCAGCGATGAAACAGATTCATCCTCTGCTCCTTCC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGGAAGGAGCAGAGGATaGATCTGTTTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNGRSRG*ICFIAG
Trigger: CCCAGCGATGAAACAGATTCATCCTCTGCTCCTTCC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGGAAGGAGCAGAGGATaGATCTGTTTCATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQGRSRG*ICFIAG
Trigger: CCCAGCGATGAAACAGATTCATCCTCTGCTCCTTCC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAACCAGGTTAGCCACTaGTTCACCTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSNQVSH*FTWNKA
Trigger: GGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGTT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACCAGGTTAGCCACTaGTTCACCTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNQVSH*FTWNKA
Trigger: GGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSRSTPF*NRTLHF
Trigger: AAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCCAGGAACTCGCTGTTaGCAGCAGTCTTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNPGTRC*QQSWDS
Trigger: ACTATCCCAAGACTGCTGGCAACAGCGAGTTCCTGG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCCAGGAACTCGCTGTTaGCAGCAGTCTTGGGATAGT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQPGTRC*QQSWDS
Trigger: ACTATCCCAAGACTGCTGGCAACAGCGAGTTCCTGG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSVCGVV*CGVVIS
Trigger: CGAGATGACAACTCCGCAGCAAACAACTCCGCAAAC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSWLTL*CWAIKV
Trigger: AACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCCTGGTTGACCCTCTaGTGCTGGGCCATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSWLTL*CWAIKV
Trigger: AACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNPISPN*DCVGGM
Trigger: CATGCCTCCCACACAATCGCAGTTTGGAGAGATGGG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPISPN*DCVGGM
Trigger: CATGCCTCCCACACAATCGCAGTTTGGAGAGATGGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCCTTCGACTGTCCTTaGAGCTGGGATAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSFDCP*SWDKSP
Trigger: GGGACTCTTATCCCAGCTGCAAGGACAGTCGAAGGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCCTTCGACTGTCCTTaGAGCTGGGATAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSFDCP*SWDKSP
Trigger: GGGACTCTTATCCCAGCTGCAAGGACAGTCGAAGGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCCTTCGACTGTCCTTaGAGCTGGGATAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSFDCP*SWDKSP
Trigger: GGGACTCTTATCCCAGCTGCAAGGACAGTCGAAGGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSMTPLRMSLDSTPTLRSSSSAS*RNPFLK
Trigger: TTTCAGAAATGGATTCCTGCACGAAGCACTAGACGA...GCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSHSPL*RLDNEE
Trigger: TTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSHSPL*RLDNEE
Trigger: TTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGTTGCCAGCAGTCTTaGGATAGTGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQCCQQS*DSAEVH
Trigger: GTGCACCTCAGCACTATCCCAAGACTGCTGGCAACA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTGACCCTCTGCTGCTaGGCCATCAAAGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLTLCC*AIKVWC
Trigger: GCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTGCGAGGAACCCAATaGTGTTCTCGCAACTCTACG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLRGTQ*CSRNST
Trigger: CGTAGAGTTGCGAGAACACCATTGGGTTCCTCGCAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACATTTTCATCCTGGGTaGCATGAACGGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVHFHPG*HERSLQ
Trigger: CTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGGTGTTTGAGTGCGTaGTGGTTGTGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQWCLSA*WLCTRR
Trigger: CCTCCTAGTGCACAACCACCACGCACTCAAACACCA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCCGTTTTTCCCTTCCTaGGAACAAAAGAGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSPFFPS*EQKSGA
Trigger: TGCTCCGCTCTTTTGTTCCCAGGAAGGGAAAAACGG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACTCTACACCCACATTaGGGAGCTCAAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTLHPH*GAQGIA
Trigger: AGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACTCTACACCCACATTaGGGAGCTCAAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTLHPH*GAQGIA
Trigger: AGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTACTGTCCTCATTATCTaGCAGAGGCACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSTVLII*QRHSKS
Trigger: GGATTTGGAGTGCCTCTGTCAGATAATGAGGACAGT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSLLIP*AIGAGI
Trigger: TATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGTCCCCCATGGCCATTaGAGAGTTGATTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSVPHGH*RVDLND
Trigger: ATCGTTCAAATCAACTCTTCAATGGCCATGGGGGAC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTCATTAGGAACGACTaGGCAGGCCTCAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQFIRND*AGLRLI
Trigger: GATTAGCCTGAGGCCTGCTCAGTCGTTCCTAATGAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTCATTAGGAACGACTaGGCAGGCCTCAGGCTAATC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNFIRND*AGLRLI
Trigger: GATTAGCCTGAGGCCTGCTCAGTCGTTCCTAATGAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAAGGAGTTCTTCCTTTaGCGGTGGTGGCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSKEFFL*RWWLFA
Trigger: AGCAAAAAGCCACCACCGTCAAAGGAAGAACTCCTT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCAGGAAAGCCTGCATaGAGTTGTCACTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSGKPA*SCHLWL
Trigger: TAGCCACAAGTGACAACTTCATGCAGGCTTTCCTGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCACCAGCTCTGAAATaGTGGCACGAGCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSPALK*WHELQT
Trigger: AGTTTGCAGCTCGTGCCATCATTTCAGAGCTGGTGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCACCAGCTCTGAAATaGTGGCACGAGCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSPALK*WHELQT
Trigger: AGTTTGCAGCTCGTGCCATCATTTCAGAGCTGGTGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGAGCATACAGGGCACTaGCTTGTAGATCAACGTGAT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSEHTGH*LVDQRD
Trigger: ATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGAGCATACAGGGCACTaGCTTGTAGATCAACGTGAT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSEHTGH*LVDQRD
Trigger: ATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCAGGTTAGCCACTaGTTCACCTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNQVSH*FTWNKA
Trigger: GGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGGGGACAGGAGAAATaGAATACCTGGAAATTCCCC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSRGQEK*NTWKFP
Trigger: GGGGAATTTCCAGGTATTTCATTTCTCCTGTCCCCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVRSTPF*NRTLHF
Trigger: AAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQRSTPF*NRTLHF
Trigger: AAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSSSAS*RNPFLS
Trigger: GCTCAGAAATGGATTCCTGCACGAAGCACTAGACGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSSAS*RNPFLS
Trigger: GCTCAGAAATGGATTCCTGCACGAAGCACTAGACGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCGVVC*GVVISS
Trigger: AGACGAGATGACAACTCCGCAGCAAACAACTCCGCA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQCGVVC*GVVISS
Trigger: AGACGAGATGACAACTCCGCAGCAAACAACTCCGCA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNVCGVV*CGVVIS
Trigger: CGAGATGACAACTCCGCAGCAAACAACTCCGCAAAC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVVCGVV*CGVVIS
Trigger: CGAGATGACAACTCCGCAGCAAACAACTCCGCAAAC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGTGCGTGGTGGTTGTaGACTAGGAGGAATCATAGT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSAWWL*TRRNHS
Trigger: ACTATGATTCCTCCTAGTGCACAACCACCACGCACT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACGGTGGTGGCTTTTTaGTGGTCTTGGCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTVVAF*WSWQAF
Trigger: AAAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACGGTGGTGGCTTTTTaGTGGTCTTGGCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTVVAF*WSWQAF
Trigger: AAAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCCTGGAACAAAGCCTTaGCTTTTCCCGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSPGTKP*LFPETL
Trigger: AAGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCTAGGAATTTTTACTaGCTTGACGAGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPRNFY*LDEASD
Trigger: GTCGCTGGCCTCGTCAAGGCAGTAAAAATTCCTAGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSHSPL*RLDNEE
Trigger: TTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGGGCCATCAAAGTTTaGTGCATCTTCTGCCAATCG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSWAIKV*CIFCQS
Trigger: CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGACTTGGCTCGTTCATaGTCTAATCTAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSDLARS*SNLGPT
Trigger: AGTGGGACCTAGATTAGACCATGAACGAGCCAAGTC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTGCGAGGAACCCAATaGTGTTCTCGCAACTCTACG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQLRGTQ*CSRNST
Trigger: CGTAGAGTTGCGAGAACACCATTGGGTTCCTCGCAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTGCGAGGAACCCAATaGTGTTCTCGCAACTCTACG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLRGTQ*CSRNST
Trigger: CGTAGAGTTGCGAGAACACCATTGGGTTCCTCGCAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTATCCTGGATAACTCCTaGACCAGTACCAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSILDNS*TSTNSA
Trigger: AGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGAT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGATGACGTCCCATGGTaGGTGAAAATCTATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSDDVPW*VKIYPG
Trigger: TCCAGGATAGATTTTCACCCACCATGGGACGTCATC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGCTGGCTTAGCCCCTaGCTTTTCATAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSWLSP*LFINLP
Trigger: AGGCAAGTTTATGAAAAGCCAGGGGCTAAGCCAGCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCTTAGAAAACCGAGGTaGCATATCCTTCGACTGTCC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLRKPR*HILRLS
Trigger: GGACAGTCGAAGGATATGCCACCTCGGTTTTCTAAG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGTTTGAGTGCGTGGTaGTTGTGCACTAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCLSAW*LCTRRN
Trigger: ATTCCTCCTAGTGCACAACCACCACGCACTCAAACA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGTGGTGGCTTTTTGCTaGTCTTGGCAGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNVVAFC*SWQAFP
Trigger: AGGAAAAGCCTGCCAAGACCAGCAAAAAGCCACCAC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGTGGTGGCTTTTTGCTaGTCTTGGCAGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVVVAFC*SWQAFP
Trigger: AGGAAAAGCCTGCCAAGACCAGCAAAAAGCCACCAC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
3UTR CAA 72 bp ACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATaGAGGAGCTCAAGGCATAGCTTGTCAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: TPLRMSLDSTPT*RSSRHSLSNFS
Trigger: TGAAAAGTTTGACAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGGGGACAGGAGAAATaGAATACCTTCACCGAGAAC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVRGQEK*NTFTEN
Trigger: GTTCTCGGTGAAGGTATTTCATTTCTCCTGTCCCCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339995.11
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCCACTTTGGCGGCTTaGCAACGAAGAATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSTLAA*QRRIFK
Trigger: TTTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCCACTTTGGCGGCTTaGCAACGAAGAATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSTLAA*QRRIFK
Trigger: TTTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAATCGCAGACATAGCTaGGCATACAGTGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNRRHS*AYSELY
Trigger: GTATAGCTCACTGTATGCTCAGCTATGTCTGCGATT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACTGTCCTCATTATCTaGCAGAGGCACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTVLII*QRHSKS
Trigger: GGATTTGGAGTGCCTCTGTCAGATAATGAGGACAGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTATTCGGGCAAAGTACTaGTCCATTAAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSIRAKY*SIKDLA
Trigger: AGCCAAGTCCTTAATGGATCAGTACTTTGCCCGAAT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCATTCGGGCAAAGTACTaGTCCATTAAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSIRAKY*SIKDLA
Trigger: AGCCAAGTCCTTAATGGATCAGTACTTTGCCCGAAT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSLLIP*AIGAGI
Trigger: TATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSLLIP*AIGAGI
Trigger: TATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGACGTCCCATGGTGGGTaGAAATCTATCCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQTSHGG*KSILDN
Trigger: GTTATCCAGGATAGATTTTCACCCACCATGGGACGT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACGTCCCATGGTGGGTaGAAATCTATCCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTSHGG*KSILDN
Trigger: GTTATCCAGGATAGATTTTCACCCACCATGGGACGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACGTCCCATGGTGGGTaGAAATCTATCCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTSHGG*KSILDN
Trigger: GTTATCCAGGATAGATTTTCACCCACCATGGGACGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGTCCCCCATGGCCATTaGAGAGTTGATTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVVPHGH*RVDLND
Trigger: ATCGTTCAAATCAACTCTTCAATGGCCATGGGGGAC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGTCCCCCATGGCCATTaGAGAGTTGATTTGAACGAT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQVPHGH*RVDLND
Trigger: ATCGTTCAAATCAACTCTTCAATGGCCATGGGGGAC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAAGGAGTTCTTCCTTTaGCGGTGGTGGCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVKEFFL*RWWLFA
Trigger: AGCAAAAAGCCACCACCGTCAAAGGAAGAACTCCTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAAGGAGTTCTTCCTTTaGCGGTGGTGGCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNKEFFL*RWWLFA
Trigger: AGCAAAAAGCCACCACCGTCAAAGGAAGAACTCCTT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCAGGAAAGCCTGCATaGAGTTGTCACTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSGKPA*SCHLWL
Trigger: TAGCCACAAGTGACAACTTCATGCAGGCTTTCCTGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCAGGAAAGCCTGCATaGAGTTGTCACTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSGKPA*SCHLWL
Trigger: TAGCCACAAGTGACAACTTCATGCAGGCTTTCCTGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCCACTTTCTAGTGGTTaGGCTAGTTCTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSPLSSG*ASSEML
Trigger: GAGCATTTCAGAACTAGCTCAACCACTAGAAAGTGG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCCACTTTCTAGTGGTTaGGCTAGTTCTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSPLSSG*ASSEML
Trigger: GAGCATTTCAGAACTAGCTCAACCACTAGAAAGTGG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGAGCATACAGGGCACTaGCTTGTAGATCAACGTGAT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNEHTGH*LVDQRD
Trigger: ATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGAGCATACAGGGCACTaGCTTGTAGATCAACGTGAT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQEHTGH*LVDQRD
Trigger: ATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGAATTTTTACTGCCTTaGCGAGGCCAGCGACTAGAT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNEFLLP*RGQRLD
Trigger: ATCTAGTCGCTGGCCTCGTCAAGGCAGTAAAAATTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSSSAS*RNPFLS
Trigger: GCTCAGAAATGGATTCCTGCACGAAGCACTAGACGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSFFFV*GVVCCG
Trigger: TCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGCCATCAAAGTTTGGTaGATCTTCTGCCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNAIKVW*IFCQSQ
Trigger: CTGCGATTGGCAGAAGATGCACCAAACTTTGATGGC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGCCATCAAAGTTTGGTaGATCTTCTGCCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQAIKVW*IFCQSQ
Trigger: CTGCGATTGGCAGAAGATGCACCAAACTTTGATGGC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCCATCAAAGTTTGGTaGATCTTCTGCCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAIKVW*IFCQSQ
Trigger: CTGCGATTGGCAGAAGATGCACCAAACTTTGATGGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGTCAAGAAAAGCCTTaGGAGGAACCCAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCQEKP*EEPNGV
Trigger: AACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGTCAAGAAAAGCCTTaGGAGGAACCCAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSCQEKP*EEPNGV
Trigger: AACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGTGCGTGGTGGTTGTaGACTAGGAGGAATCATAGT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSAWWL*TRRNHS
Trigger: ACTATGATTCCTCCTAGTGCACAACCACCACGCACT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGTGCGTGGTGGTTGTaGACTAGGAGGAATCATAGT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSAWWL*TRRNHS
Trigger: ACTATGATTCCTCCTAGTGCACAACCACCACGCACT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGAGAGGAAAATGGGTaGCACTTTCTAGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSREENG*HFLVVE
Trigger: CTCAACCACTAGAAAGTGGCACCCATTTTCCTCTCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGCCTTTTGGGAAGTTaGTGTTATAGCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCLLGS*CYSSAP
Trigger: AGGTGCACTGCTATAACAGCAACTTCCCAAAAGGCA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCTGGAACAAAGCCTTaGCTTTTCCCGGAAACTCTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPGTKP*LFPETL
Trigger: AAGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGCAAAGAAGGTCCTTaGAATAGACTGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSKEGP*NRLPLL
Trigger: AAGCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGCAAAGAAGGTCCTTaGAATAGACTGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSKEGP*NRLPLL
Trigger: AAGCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGGGCCATCAAAGTTTaGTGCATCTTCTGCCAATCG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQWAIKV*CIFCQS
Trigger: CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTGGGCCATCAAAGTTTaGTGCATCTTCTGCCAATCG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNWAIKV*CIFCQS
Trigger: CGATTGGCAGAAGATGCACCAAACTTTGATGGCCCA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGACTTGGCTCGTTCATaGTCTAATCTAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNDLARS*SNLGPT
Trigger: AGTGGGACCTAGATTAGACCATGAACGAGCCAAGTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGACTTGGCTCGTTCATaGTCTAATCTAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQDLARS*SNLGPT
Trigger: AGTGGGACCTAGATTAGACCATGAACGAGCCAAGTC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGACTTGGCTCGTTCATaGTCTAATCTAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVDLARS*SNLGPT
Trigger: AGTGGGACCTAGATTAGACCATGAACGAGCCAAGTC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSKSSK*VPIHFH
Trigger: ATGAAAATGGATAGGGACCCACTTGGAGGACTTGCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSKSSK*VPIHFH
Trigger: ATGAAAATGGATAGGGACCCACTTGGAGGACTTGCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATCCTGGATAACTCCTaGACCAGTACCAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNILDNS*TSTNSA
Trigger: AGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAATCCTGGATAACTCCTaGACCAGTACCAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVILDNS*TSTNSA
Trigger: AGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGAT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGATGACGTCCCATGGTaGGTGAAAATCTATCCTGGA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNDDVPW*VKIYPG
Trigger: TCCAGGATAGATTTTCACCCACCATGGGACGTCATC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACGATGACGTCCCATaGTGGGTGAAAATCTATCCT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNDDVP*WVKIYP
Trigger: AGGATAGATTTTCACCCACCATGGGACGTCATCGTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAGCTGGCTTAGCCCCTaGCTTTTCATAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSWLSP*LFINLP
Trigger: AGGCAAGTTTATGAAAAGCCAGGGGCTAAGCCAGCT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGCTGGCTTAGCCCCTaGCTTTTCATAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSWLSP*LFINLP
Trigger: AGGCAAGTTTATGAAAAGCCAGGGGCTAAGCCAGCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGTTTGAGTGCGTGGTaGTTGTGCACTAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCLSAW*LCTRRN
Trigger: ATTCCTCCTAGTGCACAACCACCACGCACTCAAACA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTGGCAGGCTTTTCCTaGATAAGCGGTGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLAGFS*ISGGLV
Trigger: AACTAATCCACCGCTTATCCAGGAAAAGCCTGCCAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTGGCAGGCTTTTCCTaGATAAGCGGTGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLAGFS*ISGGLV
Trigger: AACTAATCCACCGCTTATCCAGGAAAAGCCTGCCAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAGGAAGAGAGGAAAATaGGTGCCACTTTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSRKRGK*VPLSSG
Trigger: ACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGGAAGAGAGGAAAATaGGTGCCACTTTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSRKRGK*VPLSSG
Trigger: ACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGGCCTCAGGCTAATCTaGCTTTTCATAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSGLRLI*LFINLP
Trigger: AGGCAAGTTTATGAAAAGCCAGATTAGCCTGAGGCC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396525.7
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACGAGCAACATCACGTaGAAAATGTCTGCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTSNIT*KMSALG
Trigger: TCCTAGGGCAGACATTTTCCACGTGATGTTGCTCGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526148.6
3UTR CAA 72 bp GACTCTACACCCACATTGAGGAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTAAGCTTATTTAGTATG +
Preference number: 4 (lower is better)
Translates to: DSTPTLRSSRHS*SNFSGVSLFSM
Trigger: CATACTAAATAAGCTTACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCCACTTTGGCGGCTTaGCAACGAAGAATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSTLAA*QRRIFK
Trigger: TTTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAATCGCAGACATAGCTaGGCATACAGTGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNRRHS*AYSELY
Trigger: GTATAGCTCACTGTATGCTCAGCTATGTCTGCGATT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCTCTCCCATATCTTTaGGTTGGACTCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPLPYL*VGLSSS
Trigger: AGAAGAAGAGAGTCCAACTCAAAGATATGGGAGAGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCCTCTCCCATATCTTTaGGTTGGACTCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQPLPYL*VGLSSS
Trigger: AGAAGAAGAGAGTCCAACTCAAAGATATGGGAGAGG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATTCGGGCAAAGTACTaGTCCATTAAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQIRAKY*SIKDLA
Trigger: AGCCAAGTCCTTAATGGATCAGTACTTTGCCCGAAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAATTCGGGCAAAGTACTaGTCCATTAAGGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVIRAKY*SIKDLA
Trigger: AGCCAAGTCCTTAATGGATCAGTACTTTGCCCGAAT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTATTGAAGAGTTGATTTaGACGATGACGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSIEELI*TMTSHG
Trigger: ACCATGGGACGTCATCGTTCAAATCAACTCTTCAAT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCCACTTTCTAGTGGTTaGGCTAGTTCTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNPLSSG*ASSEML
Trigger: GAGCATTTCAGAACTAGCTCAACCACTAGAAAGTGG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCATGCGGTCCTTATTCTaGTCAATTTCTGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSMRSLF*SISGSI
Trigger: AATGCTCCCAGAAATTGATCAGAATAAGGACCGCAT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGTTCCTTCTCCAATTTaGGGAGTGGGAATAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSVPSPI*GVGIRN
Trigger: GTTTCTTATTCCCACTCCTCAAATTGGAGAAGGAAC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACATTACAGCGGAATaGATTTTCGCAGTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNITAE*IFAVVR
Trigger: CCTAACCACTGCGAAAATTCATTCCGCTGTAATGTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGGGGACAGGAGAAATaGAATACCTGGAACGAGAAA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVRGQEK*NTWNEK
Trigger: TTTCTCGTTCCAGGTATTTCATTTCTCCTGTCCCCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525681.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSFFFV*GVVCCG
Trigger: TCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGTCAAGAAAAGCCTTaGGAGGAACCCAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCQEKP*EEPNGV
Trigger: AACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGTCAAGAAAAGCCTTaGGAGGAACCCAATGGTGTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQCQEKP*EEPNGV
Trigger: AACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTACATTCAGGAAAGCCTaGATGAAGTTGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSTFRKA*MKLSLV
Trigger: CACAAGTGACAACTTCATGCAGGCTTTCCTGAATGT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGAGAGGAAAATGGGTaGCACTTTCTAGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVREENG*HFLVVE
Trigger: CTCAACCACTAGAAAGTGGCACCCATTTTCCTCTCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGAGAGGAAAATGGGTaGCACTTTCTAGTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQREENG*HFLVVE
Trigger: CTCAACCACTAGAAAGTGGCACCCATTTTCCTCTCT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGCCTTTTGGGAAGTTaGTGTTATAGCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCLLGS*CYSSAP
Trigger: AGGTGCACTGCTATAACAGCAACTTCCCAAAAGGCA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTGCCTTTTGGGAAGTTaGTGTTATAGCAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNCLLGS*CYSSAP
Trigger: AGGTGCACTGCTATAACAGCAACTTCCCAAAAGGCA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGTCCTTGCAATAGACTaGCTCTGCTTGAGAACTTAT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSVLAID*LCLRTY
Trigger: ATAAGTTCTCAAGCAGAGGCAGTCTATTGCAAGGAC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGCAAAGAAGGTCCTTaGAATAGACTGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSKEGP*NRLPLL
Trigger: AAGCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAAAGACTTGTGCACTTaGCCAGGCTCAAGGATATTA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSKDLCT*PGSRIL
Trigger: TAATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCACGTGGAAAATGTCTaGCCTAGGAATTTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSHVENV*PRNFYC
Trigger: GCAGTAAAAATTCCTAGGGCAGACATTTTCCACGTG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGATCCATTAAGGACTTaGCTCGTTCATGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSDPLRT*LVHGLI
Trigger: GATTAGACCATGAACGAGCCAAGTCCTTAATGGATC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAGCAAGTCCTCCAAGTaGGTCCCTATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSKSSK*VPIHFH
Trigger: ATGAAAATGGATAGGGACCCACTTGGAGGACTTGCT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCACCAATTCCGCTACCTaGCATTTGTCCAAACATATC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSTNSAT*HLSKHI
Trigger: GATATGTTTGGACAAATGCCAGGTAGCGGAATTGGT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTACCAATTCCGCTACCTaGCATTTGTCCAAACATATC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSTNSAT*HLSKHI
Trigger: GATATGTTTGGACAAATGCCAGGTAGCGGAATTGGT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGGTGAAAATCTATCCTaGATAACTCCTGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSGENLS*ITPGPV
Trigger: TACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAACGATGACGTCCCATaGTGGGTGAAAATCTATCCT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQNDDVP*WVKIYP
Trigger: AGGATAGATTTTCACCCACCATGGGACGTCATCGTT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGATGACGTCCCATaGTGGGTGAAAATCTATCCT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNDDVP*WVKIYP
Trigger: AGGATAGATTTTCACCCACCATGGGACGTCATCGTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTCCTGGATAAGCGGTaGATTAGTTTTGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFLDKR*ISFETK
Trigger: CTTGGTCTCAAAACTAATCCACCGCTTATCCAGGAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTGGCAGGCTTTTCCTaGATAAGCGGTGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLAGFS*ISGGLV
Trigger: AACTAATCCACCGCTTATCCAGGAAAAGCCTGCCAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCCAGTTTGGGACACTaGTCCAATACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSLGH*SNTFRK
Trigger: TTTCCTGAATGTATTGGACCAGTGTCCCAAACTGGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGGAAGAGAGGAAAATaGGTGCCACTTTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQRKRGK*VPLSSG
Trigger: ACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAGGAAGAGAGGAAAATaGGTGCCACTTTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNRKRGK*VPLSSG
Trigger: ACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGCTCTAACTGTTCTTTaGAAGGAGCAGAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSALTVL*KEQRMN
Trigger: ATTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGCTCTAACTGTTCTTTaGAAGGAGCAGAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSALTVL*KEQRMN
Trigger: ATTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCTTGACGAATTTGATTaGTCGTCTTTGGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLDEFD*SSLVHC
Trigger: ACAATGGACCAAAGACGATCAATCAAATTCGTCAAG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATTGAAGAGTTGATTTaGACGATGACGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNIEELI*TMTSHG
Trigger: ACCATGGGACGTCATCGTTCAAATCAACTCTTCAAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATTGAAGAGTTGATTTaGACGATGACGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQIEELI*TMTSHG
Trigger: ACCATGGGACGTCATCGTTCAAATCAACTCTTCAAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTTCTCTTACACCATTaGCAGCCTCATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSFLLHH*QPHLHF
Trigger: GAAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATGCGGTCCTTATTCTaGTCAATTTCTGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQMRSLF*SISGSI
Trigger: AATGCTCCCAGAAATTGATCAGAATAAGGACCGCAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATGCGGTCCTTATTCTaGTCAATTTCTGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNMRSLF*SISGSI
Trigger: AATGCTCCCAGAAATTGATCAGAATAAGGACCGCAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGTTCCTTCTCCAATTTaGGGAGTGGGAATAAGAAAC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNVPSPI*GVGIRN
Trigger: GTTTCTTATTCCCACTCCTCAAATTGGAGAAGGAAC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGTTCCTTCTCCAATTTaGGGAGTGGGAATAAGAAAC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQVPSPI*GVGIRN
Trigger: GTTTCTTATTCCCACTCCTCAAATTGGAGAAGGAAC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATTACAGCGGAATaGATTTTCGCAGTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVNITAE*IFAVVR
Trigger: CCTAACCACTGCGAAAATTCATTCCGCTGTAATGTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAACATTACAGCGGAATaGATTTTCGCAGTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQNITAE*IFAVVR
Trigger: CCTAACCACTGCGAAAATTCATTCCGCTGTAATGTT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCAGGCTAATCTCATCTaGATTAAGCTGTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSQANLI*IKLSFL
Trigger: AAGAAAGGACAGCTTAATGCAGATGAGATTAGCCTG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGACATTCAGGAAAGCCTaGATGAAGTTGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQTFRKA*MKLSLV
Trigger: CACAAGTGACAACTTCATGCAGGCTTTCCTGAATGT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACATTCAGGAAAGCCTaGATGAAGTTGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTFRKA*MKLSLV
Trigger: CACAAGTGACAACTTCATGCAGGCTTTCCTGAATGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCCAAAATCTCCAACATaGGGTCCTTATTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSPKSPT*GPYSDQ
Trigger: TTGATCAGAATAAGGACCGCATGTTGGAGATTTTGG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAAAAGCGAAGTAACATaGCTTTTGGGAAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSKSEVT*LLGSCC
Trigger: ACAGCAACTTCCCAAAAGGCATGTTACTTCGCTTTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGCAATAGACTGCCTCTaGTTGAGAACTTATGATGTA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSAIDCL*LRTYDV
Trigger: TACATCATAAGTTCTCAAGCAGAGGCAGTCTATTGC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGTCCTTGCAATAGACTaGCTCTGCTTGAGAACTTAT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQVLAID*LCLRTY
Trigger: ATAAGTTCTCAAGCAGAGGCAGTCTATTGCAAGGAC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCCCATATCTTTGAGTTaGACTCTCTTCTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSPISLS*TLFFFS
Trigger: GGAAAAGAAGAAGAGAGTCCAACTCAAAGATATGGG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGATCCATTAAGGACTTaGCTCGTTCATGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNDPLRT*LVHGLI
Trigger: GATTAGACCATGAACGAGCCAAGTCCTTAATGGATC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACCAATTCCGCTACCTaGCATTTGTCCAAACATATC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTNSAT*HLSKHI
Trigger: GATATGTTTGGACAAATGCCAGGTAGCGGAATTGGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGACCAATTCCGCTACCTaGCATTTGTCCAAACATATC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQTNSAT*HLSKHI
Trigger: GATATGTTTGGACAAATGCCAGGTAGCGGAATTGGT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGGTGAAAATCTATCCTaGATAACTCCTGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNGENLS*ITPGPV
Trigger: TACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGGTGAAAATCTATCCTaGATAACTCCTGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVGENLS*ITPGPV
Trigger: TACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTCCTGGATAAGCGGTaGATTAGTTTTGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNFLDKR*ISFETK
Trigger: CTTGGTCTCAAAACTAATCCACCGCTTATCCAGGAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTCCTGGATAAGCGGTaGATTAGTTTTGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVFLDKR*ISFETK
Trigger: CTTGGTCTCAAAACTAATCCACCGCTTATCCAGGAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCCAGTTTGGGACACTaGTCCAATACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSSLGH*SNTFRK
Trigger: TTTCCTGAATGTATTGGACCAGTGTCCCAAACTGGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCCAGTTTGGGACACTaGTCCAATACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSSLGH*SNTFRK
Trigger: TTTCCTGAATGTATTGGACCAGTGTCCCAAACTGGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGCTCTAACTGTTCTTTaGAAGGAGCAGAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNALTVL*KEQRMN
Trigger: ATTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCTTGACGAATTTGATTaGTCGTCTTTGGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLDEFD*SSLVHC
Trigger: ACAATGGACCAAAGACGATCAATCAAATTCGTCAAG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTTCTCTTACACCATTaGCAGCCTCATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQFLLHH*QPHLHF
Trigger: GAAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTTCTCTTACACCATTaGCAGCCTCATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVFLLHH*QPHLHF
Trigger: GAAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCATTTATATATGGTTTaGGGGGATGGATCCAACTTT +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSHLYMV*GDGSNF
Trigger: AAAGTTGGATCCATCCCCTCAAACCATATATAAATG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCAGGCTAATCTCATCTaGATTAAGCTGTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQQANLI*IKLSFL
Trigger: AAGAAAGGACAGCTTAATGCAGATGAGATTAGCCTG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCAGGCTAATCTCATCTaGATTAAGCTGTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNQANLI*IKLSFL
Trigger: AAGAAAGGACAGCTTAATGCAGATGAGATTAGCCTG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCCAAAATCTCCAACATaGGGTCCTTATTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQPKSPT*GPYSDQ
Trigger: TTGATCAGAATAAGGACCGCATGTTGGAGATTTTGG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACCAAAATCTCCAACATaGGGTCCTTATTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVPKSPT*GPYSDQ
Trigger: TTGATCAGAATAAGGACCGCATGTTGGAGATTTTGG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAAAAGCGAAGTAACATaGCTTTTGGGAAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNKSEVT*LLGSCC
Trigger: ACAGCAACTTCCCAAAAGGCATGTTACTTCGCTTTT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCAATAGACTGCCTCTaGTTGAGAACTTATGATGTA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAIDCL*LRTYDV
Trigger: TACATCATAAGTTCTCAAGCAGAGGCAGTCTATTGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCCCATATCTTTGAGTTaGACTCTCTTCTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQPISLS*TLFFFS
Trigger: GGAAAAGAAGAAGAGAGTCCAACTCAAAGATATGGG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTGATTGATCGTCTTTaGTCCATTGTCAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLIDRL*SIVKKS
Trigger: GCTTTTCTTGACAATGGACCAAAGACGATCAATCAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTTCCCGGAAACTCTTaGGTTATATCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSFPGNS*VISSFQ
Trigger: TTGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTTCCCGGAAACTCTTaGGTTATATCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFPGNS*VISSFQ
Trigger: TTGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACATTTATATATGGTTTaGGGGGATGGATCCAACTTT +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVHLYMV*GDGSNF
Trigger: AAAGTTGGATCCATCCCCTCAAACCATATATAAATG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR TCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCATTTATATATGGTTTaGGGGGATGGATCCAACTTT +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQHLYMV*GDGSNF
Trigger: AAAGTTGGATCCATCCCCTCAAACCATATATAAATG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGTAGTTGTTTTTCCTaGTCTAACTGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSCFS*SNCSLE
Trigger: TTCCAAAGAACAGTTAGAGCAGGAAAAACAACTACT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTGATTGATCGTCTTTaGTCCATTGTCAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQLIDRL*SIVKKS
Trigger: GCTTTTCTTGACAATGGACCAAAGACGATCAATCAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTGATTGATCGTCTTTaGTCCATTGTCAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLIDRL*SIVKKS
Trigger: GCTTTTCTTGACAATGGACCAAAGACGATCAATCAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTTCCCGGAAACTCTTaGGTTATATCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNFPGNS*VISSFQ
Trigger: TTGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTTCCCGGAAACTCTTaGGTTATATCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NHFKGINDLSKLISFVQVFPGNS*VISSFQ
Trigger: TTGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAATGAATTTTCGCAGTaGTTAGGTCAAATGCAGTTA +
Preference number: 4 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNEFSQ*LGQMQL
Trigger: TAACTGCATTTGACCTAACCACTGCGAAAATTCATT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAATGAATTTTCGCAGTaGTTAGGTCAAATGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSNEFSQ*LGQMQL
Trigger: TAACTGCATTTGACCTAACCACTGCGAAAATTCATT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAGTAGTTGTTTTTCCTaGTCTAACTGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSSCFS*SNCSLE
Trigger: TTCCAAAGAACAGTTAGAGCAGGAAAAACAACTACT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR GCA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGTAGTTGTTTTTCCTaGTCTAACTGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSSCFS*SNCSLE
Trigger: TTCCAAAGAACAGTTAGAGCAGGAAAAACAACTACT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CCA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAATGAATTTTCGCAGTaGTTAGGTCAAATGCAGTTA +
Preference number: 4 (lower is better)
Translates to: HFKGINDLSKLISFVQVNNEFSQ*LGQMQL
Trigger: TAACTGCATTTGACCTAACCACTGCGAAAATTCATT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS CCA 90 bp GCACTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTGCGGTTCCCTaGTCCCGCGCCAACGGCCTGGCCTTCCCTGCCGGCCCGCGTGCC +
Preference number: 5 (lower is better)
Translates to: ALPAGRPGSGTPAVP*SRANGLAFPAGPRA
Trigger: GGCACGCGGGCCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGTGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525995.1
CDS CCA 90 bp CAGGCTCCGGGACGCCTGCGGTTCCCTGGTCCCGCGCCAACGGCCTaGCCTTCCCTGCCGGCCCGCGTGCCTCCCGCCACGGCGCTAGCG +
Preference number: 5 (lower is better)
Translates to: QAPGRLRFPGPAPTA*PSLPARVPPATALA
Trigger: CGCTAGCGCCGTGGCGGGAGGCACGCGGGCCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS CCA 90 bp TACCTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTGCGGTTCCCTaGTCCCGCGCCAACGGCCTGGCCTTCCCTGCCGGCCCGCGTGCC +
Preference number: 5 (lower is better)
Translates to: YLPAGRPGSGTPAVP*SRANGLAFPAGPRA
Trigger: GGCACGCGGGCCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGGTA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524932.6
CDS GCA 90 bp GCCGTCCGAGCACAGCCGTGCCTCGGTCCGCCACGGCCTCGTCCCTaGAGGCGTCGGCCATCCGGCCATGACCGCACGGCGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: AVRAQPCLGPPRPRP*RRRPSGHDRTAAWP
Trigger: TGGCCAGGCCGCCGTGCGGTCATGGCCGGATGGCCGACGCCTGCAGGGACGAGGCCGTGGCGGACCGAGGCACGGCTGTGCTCGGACGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS GCA 90 bp GCCCGAAGAAGCACTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTaGGGTTCCCTGGTCCCGCGCCAACGGCCTGGCCTTCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ARRSTPRREARLRDA*GSLVPRQRPGLPCR
Trigger: CCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGTGCTTCTTCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525995.1
CDS GCA 90 bp AGAAATGAAATACCTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTaGGGTTCCCTGGTCCCGCGCCAACGGCCTGGCCTTCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RNEIPPRREARLRDA*GSLVPRQRPGLPCR
Trigger: CCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGGTATTTCATTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524932.6
CDS GCA 90 bp AAGGAGTCGGGGACGGCCTCAAACTCAGCTCAGAGGAGTCGCTGCTaGAGCCGCCACTCGGTACCCGCTGCCACCTCCATAGAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: KESGTASNSAQRSRC*SRHSVPAATSIELR
Trigger: TCGGAGCTCTATGGAGGTGGCAGCGGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTGAGCTGAGTTTGAGGCCGTCCCCGACTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000524932.6
ENST00000525972.5
ENST00000527419.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531507.5
ENST00000534246.1
CDS GCA 90 bp AGGAAGGAGTCGGGGACGGCCTCAAACTCAGCTCAGAGGAGTCGCTaGTGCAGCCGCCACTCGGTACCCGCTGCCACCTCCATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: RKESGTASNSAQRSR*CSRHSVPAATSIEL
Trigger: GAGCTCTATGGAGGTGGCAGCGGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTGAGCTGAGTTTGAGGCCGTCCCCGACTCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000524932.6
ENST00000525972.5
ENST00000527419.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531507.5
ENST00000534246.1
CDS GCA 90 bp GTGGAAAGACGCGCGAGAGGGGGCCGGGTGTACAGGACTAGCACTTaGAGGCGGAAGACCAGGGCCACAACATGGCAGCAGGAACCTCCG +
Preference number: 5 (lower is better)
Translates to: VERRARGGRVYRTST*RRKTRATTWQQEPP
Trigger: CGGAGGTTCCTGCTGCCATGTTGTGGCCCTGGTCTTCCGCCTGCAAGTGCTAGTCCTGTACACCCGGCCCCCTCTCGCGCGTCTTTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 90 bp CCCCAGGAACTCGCTGTTGCCAGCAGTCTTGGGATAGTGCTGAGGTaGACCCCTACTTCCTCCTCCGCCCGAAGAAGCACTTCACCGAGA +
Preference number: 5 (lower is better)
Translates to: PQELAVASSLGIVLR*TPTSSSARRSTSPR
Trigger: TCTCGGTGAAGTGCTTCTTCGGGCGGAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGCGAGTTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525972.5
CDS GCA 90 bp CCCCAGGAACTCGCTGTTGCCAGCAGTCTTGGGATAGTGCTGAGGTaGACCCCTACTTCCTCCTCCGCCCGAAGAAGCACTGAAACGAGA +
Preference number: 5 (lower is better)
Translates to: PQELAVASSLGIVLR*TPTSSSARRSTETR
Trigger: TCTCGTTTCAGTGCTTCTTCGGGCGGAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGCGAGTTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527526.6
ENST00000530211.6
ENST00000531416.6
ENST00000531647.6
ENST00000532082.6
ENST00000532570.6
CDS CCA 90 bp GTGTACAGGACTAGCACTTGCAGGCGGAAGACCAGGGCCACAACATaGCAGCAGGAACCTCCGCCCCGTTTTTCCCTTCCTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: VYRTSTCRRKTRATT*QQEPPPRFSLPGNK
Trigger: TTTGTTCCCAGGAAGGGAAAAACGGGGCGGAGGTTCCTGCTGCCATGTTGTGGCCCTGGTCTTCCGCCTGCAAGTGCTAGTCCTGTACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS-3UTR CAA 90 bp CTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCTTGCTTCTGTCCTGGTaGACCCTCTGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LSWLTLCCWAIKVWCIFCLLLSW*TLCCWA
Trigger: GGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAA...GCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS GCA 90 bp TCCTCCTCCGCCCGAAGAAGCACTGAAACGAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTTGGCGGCTTGACAACGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: SSSARRSTETRSTPF*NRTLHFGGLTTKNL
Trigger: AAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGTGCTTCTTCGGGCGGAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527526.6
ENST00000530211.6
ENST00000531416.6
ENST00000531647.6
ENST00000532082.6
ENST00000532570.6
ENST00000533485.1
CDS GCA 90 bp ATGTTTACCACACCTGTTGCCAGCAGTCTTGGGATAGTGCTGAGGTaGACCCCTACTTCCTCCTCCGCCCGAAGAAGCACTGAAACGAGA +
Preference number: 5 (lower is better)
Translates to: MFTTPVASSLGIVLR*TPTSSSARRSTETR
Trigger: TCTCGTTTCAGTGCTTCTTCGGGCGGAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGGTGTGGTAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533485.1
CDS-3UTR CAA 90 bp CCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAGTCGTTCTTTTTCGTTaGCGGAGTTGTTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: PSGSLSIFILGGMNGPSRVVLFR*RSCLLR
Trigger: CCGCAGCAAACAACTCCGCAAACGAAAAAGAACGAC...TCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp TCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCGTCACTTCTCATCCCTaGAGCCATAGGAGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SSKWVPIHFHPGWHERSLVTSHP*SHRSRN
Trigger: ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGAC...GAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp TCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGTCTGAATGTGGTGCTTaGCTTCTGTCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: SVLVDPLLLGHQSLVHLLSECGA*LLSWLT
Trigger: GGTCAACCAGGACAGAAGCAAAGCACCACATTCAGA...CAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR CAA 90 bp GGTGAAAATCTATCCTGGATAACTCCTGGACCAGTACCAATTCCGCTACCTGGCCGTTTGCGGAGTTGTTaGCTGCGGAGTTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: GENLSWITPGPVPIPLPGRLRSC*LRSCHL
Trigger: GAGATGACAACTCCGCAGCAAACAACTCCGCAAACG...GCCAGGTAGCGGAATTGGTACTGGTCCAGGAGTTATCCAGGATAGATTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp ATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACTCTCCAAACTGCGATaGTGTGGGAGGCATGATGTG +
Preference number: 5 (lower is better)
Translates to: ISKSSKWVPIHFHPGWHELSKLR*CGRHDV
Trigger: CACATCATGCCTCCCACACAATCGCAGTTTGGAGAG...TTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp TGCTTTGCTTCTGTCCTGGTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGGGCTCTTCTAGGGCTTaGTCCACAATCCTCTTACTT +
Preference number: 5 (lower is better)
Translates to: CFASVLVDPLLLGHQSLVGSSRA*STILLL
Trigger: AAGTAAGAGGATTGTGGACAAAGCCCTAGAAGAGCC...CACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS TCA 90 bp GGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATAAACACCCCTAGATCCCTCTTACTT +
Preference number: 5 (lower is better)
Translates to: GGMNGPSRKKSLLIP*AIGAGINTPRSLLL
Trigger: AAGTAAGAGGGATCTAGGGGTGTTTATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS GCA 90 bp AGGCTAATCTGGCTTTTCATAAACTTGCCTCCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAG +
Preference number: 5 (lower is better)
Translates to: RLIWLFINLPPISPN*DCVGGMMCPPWPLK
Trigger: CTTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCAGATTAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396525.7
ENST00000531416.6
CDS-3UTR CAA 90 bp CATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTGAGCCATAGGAGCCTCCACTTTGGCGGCTaGACAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: HERSLQKEVTSHPLSHRSLHFGG*TTKNLQ
Trigger: TTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAG...GCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp GTTGACCCTCTGCTGCTGGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: VDPLLLGHQSLVHLLPIATVSYT*ALLGLC
Trigger: ACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGT...TGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCCAGCAGCAGAGGGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS TCA 90 bp GGGCCATCAAAGTTTGGTGCATCTTCTGCCAATCGCAGACATAGCTaGGCATACAGTGAGCTATACTTTGGCTCTTCTAGGGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GPSKFGASSANRRHS*AYSELYFGSSRALS
Trigger: GGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAGATGCACCAAACTTTGATGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527015.1
ENST00000527419.6
ENST00000531416.6
ENST00000532082.6
ENST00000532152.5
ENST00000532349.1
ENST00000532383.5
ENST00000534605.1
CDS TCA 90 bp GGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATAAACACCCCTAGATCTTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: GGMNGPSRKKSLLIP*AIGAGINTPRSFTA
Trigger: TGCAGTAAAAGATCTAGGGGTGTTTATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 90 bp TTACTTACCTGGCTTTTCATAAACTTGCCTCCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATGATGTGTCCCCCATGGCCATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLTWLFINLPPISPN*DCVGGMMCPPWPLK
Trigger: CTTCAATGGCCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCAGGTAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 90 bp ATCGTCTTTGGTCCATTGTCAAGAAAAGCCTTGCGAGGAACCCAATaGTGTTCTCGCAACTCTACGGTATCCTGCAGCAGGAAACGAATC +
Preference number: 5 (lower is better)
Translates to: IVFGPLSRKALRGTQ*CSRNSTVSCSRKRI
Trigger: GATTCGTTTCCTGCTGCAGGATACCGTAGAGTTGCGAGAACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACAATGGACCAAAGACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS-3UTR CAA 90 bp AGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCCGTTTGCGGAGTTGTTaGCTGCGGAGTTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: SSMTPLRMSLDSTPTLRSRLRSC*LRSCHL
Trigger: GAGATGACAACTCCGCAGCAAACAACTCCGCAAACG...GCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp ACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATGACTCTACACCCACATaGAGGAGCTCAAGGCATAGC +
Preference number: 5 (lower is better)
Translates to: TPLRMSLDSTPTLRSSRHDSTPT*RSSRHS
Trigger: GCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTC...ATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS GCA 90 bp CCTGAAGATTGCATCATGTCGTTCTTTTTCGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTGCAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: PEDCIMSFFFVCGVV*CGVVISSSASCRNP
Trigger: TGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS GCA 90 bp TGCGGAGTTGTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGCGTTTTGCCAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: CGVVCCGVVISSSAS*RNPFLSVLPTKNLQ
Trigger: TTGAAGATTCTTCGTTGGCAAAACGCTCAGAAATGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531507.5
CDS-3UTR CAA 90 bp GACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCACTCCACTTTGGCGGCTaGACAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: DPFKDEFRLYTHIEELKALHFGG*TTKNLQ
Trigger: TTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAG...TGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp CATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: HFHPGWHERSLQKEVTSHLFAAE*SSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAA...ATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp CATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HFHPGWHERSLQKEVTSHFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...ATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS-3UTR CAA 90 bp ACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATGTCGTTCTTTTTCGTTaGCGGAGTTGTTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TPLRMSLDSTPTLRSSRHVVLFR*RSCLLR
Trigger: CCGCAGCAAACAACTCCGCAAACGAAAAAGAACGAC...ATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp CATCTTCTGCCAATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTTGGCTCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATC +
Preference number: 5 (lower is better)
Translates to: HLLPIADIAEHTVSYTLALGHQS*VHLLPI
Trigger: GATTGGCAGAAGATGCACCAAACTTTGATGGCCCAG...AGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTGCTTCTGTCCTGGTaGACCCTCTGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQLLLSW*TLCCWA
Trigger: GGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTGCTTCTGTCCTGGTaGACCCTCTGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLLLSW*TLCCWA
Trigger: GGCCCAGCAGCAGAGGGTCAACCAGGACAGAAGCAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS GCA 90 bp GCCTCTTACTTTCCTGAAGATTGCATCATGTCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCG +
Preference number: 5 (lower is better)
Translates to: ASYFPEDCIMSFFFV*GVVCCGVVISSSAS
Trigger: CGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTCAGGAAAGTAAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS GCA 90 bp CCCTCTTACTTTCCTGAAGATTGCATCATGTCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCG +
Preference number: 5 (lower is better)
Translates to: PSYFPEDCIMSFFFV*GVVCCGVVISSSAS
Trigger: CGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTCAGGAAAGTAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS GCA 90 bp CACCCAGTTTCTGCTTTCACTGGTTTGGGGTGGGGCCTAAGAATTTaGATGTCTAGTAAATATTCCCAGTATCAACGCTGTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: HPVSAFTGLGWGLRI*MSSKYSQYQRCGTT
Trigger: TGTGGTTCCACAGCGTTGATACTGGGAATATTTACTAGACATGCAAATTCTTAGGCCCCACCCCAAACCAGTGAAAGCAGAAACTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 90 bp ACAGATTGCTGGGCCCACCCAGTTTCTGCTTTCACTGGTTTGGGGTaGGGCCTAAGAATTTGCATGTCTAGTAAATATTCCCAGTATCAA +
Preference number: 5 (lower is better)
Translates to: TDCWAHPVSAFTGLG*GLRICMSSKYSQYQ
Trigger: TTGATACTGGGAATATTTACTAGACATGCAAATTCTTAGGCCCCACCCCAAACCAGTGAAAGCAGAAACTGGGTGGGCCCAGCAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS-3UTR CAA 90 bp GTCCACAATCAGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: VHNQQYDPFKDEFRLYTHLFAAE*SSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAA...GTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTGATTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp AGTGAGCTATACTTTGGCTCTTCTAGGGCTTTGTCCACAATCAGCAGTATGACCTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SELYFGSSRALSTISSMTFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...GGTCATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp TTGTCCACAATCAGCAGTATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCGGCTCTTCTAGGGCTTaGTCCACAATCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: LSTISSMTPLRMSLDSTPGSSRA*STISSM
Trigger: CATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCC...GGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATACTGCTGATTGTGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGACGGTGGTGGCTTTTaGCTGGTCTTGGCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSDGGGF*LVLAGF
Trigger: AAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGTC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS TCA 90 bp AGACAAAGTAGGAAGAGAGGAAAATGGGTGCCACTTTCTAGTGGTTaGGCTAGTTCTGAAATGCTCACCAGCTCTGAAATGATGGCACGA +
Preference number: 5 (lower is better)
Translates to: RQSRKRGKWVPLSSG*ASSEMLTSSEMMAR
Trigger: TCGTGCCATCATTTCAGAGCTGGTGAGCATTTCAGAACTAGCTCAACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCTACTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
CDS GCA 90 bp GAAGATTGCATCATGTCGTTCTTTTTCGTTTGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCTAGTGCTTCGTGCAGGAATCCATTT +
Preference number: 5 (lower is better)
Translates to: EDCIMSFFFVCGVVC*GVVISSSASCRNPF
Trigger: AAATGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCGTTTGCGGAGTTGTTaGCTGCGGAGTTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSRLRSC*LRSCHL
Trigger: GAGATGACAACTCCGCAGCAAACAACTCCGCAAACG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCTCTCCAAACTGCGATaGTGTGGGAGGCATGATGTG +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLSKLR*CGRHDV
Trigger: CACATCATGCCTCCCACACAATCGCAGTTTGGAGAG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCCTCTCCAAACTGCGATaGTGTGGGAGGCATGATGTG +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLSKLR*CGRHDV
Trigger: CACATCATGCCTCCCACACAATCGCAGTTTGGAGAG...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGACGGTGGTGGCTTTTaGCTGGTCTTGGCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVDGGGF*LVLAGF
Trigger: AAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGTC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS TCA 90 bp GGAAGTTGCTGTTATAGCAGTGCACCTGGAGAGCATACAGGGCACTaGCTTGTAGATCAACGTGATCATGAAGAAATTTCTGCATTACTG +
Preference number: 5 (lower is better)
Translates to: GSCCYSSAPGEHTGH*LVDQRDHEEISALL
Trigger: CAGTAATGCAGAAATTTCTTCATGATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTCTCCAGGTGCACTGCTATAACAGCAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
ENST00000534272.1
ENST00000534470.1
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACGTTTGCGGAGTTGTTaGCTGCGGAGTTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVRLRSC*LRSCHL
Trigger: GAGATGACAACTCCGCAGCAAACAACTCCGCAAACG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCGTTTGCGGAGTTGTTaGCTGCGGAGTTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNRLRSC*LRSCHL
Trigger: GAGATGACAACTCCGCAGCAAACAACTCCGCAAACG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGTCGTTCTTTTTCGTTaGCGGAGTTGTTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSVVLFR*RSCLLR
Trigger: CCGCAGCAAACAACTCCGCAAACGAAAAAGAACGAC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGACTCTACACCCACATaGAGGAGCTCAAGGCATAGC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVDSTPT*RSSRHS
Trigger: GCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGACTCTACACCCACATaGAGGAGCTCAAGGCATAGC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNDSTPT*RSSRHS
Trigger: GCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGGCTCTTCTAGGGCTTaGTCCACAATCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSGSSRA*STISSM
Trigger: CATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGGCTCTTCTAGGGCTTaGTCCACAATCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSGSSRA*STISSM
Trigger: CATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATAGCTTGACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LRMSLDSTPTLRSSRHSLTVSYT*ALLGLC
Trigger: ACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGT...CAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLGHQS*VHLLPI
Trigger: GATTGGCAGAAGATGCACCAAACTTTGATGGCCCAG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCTGAATGTGGTGCTTaGCTTCTGTCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSECGA*LLSWLT
Trigger: GGTCAACCAGGACAGAAGCAAAGCACCACATTCAGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTCTGAATGTGGTGCTTaGCTTCTGTCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSECGA*LLSWLT
Trigger: GGTCAACCAGGACAGAAGCAAAGCACCACATTCAGA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGTCACTTCTCATCCCTaGAGCCATAGGAGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSVTSHP*SHRSRN
Trigger: ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGAC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCTCTCCAAACTGCGATaGTGTGGGAGGCATGATGTG +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLSKLR*CGRHDV
Trigger: CACATCATGCCTCCCACACAATCGCAGTTTGGAGAG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTGAGTGCGTGGTGGTaGTGCACTAGGAGGAATCAT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLSAWW*CTRRNH
Trigger: ATGATTCCTCCTAGTGCACAACCACCACGCACTCAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCACCTGGAACAAAGCCTaGCCTTTTCCCGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSTWNKA*PFPGNS
Trigger: AGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGGT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS TCA 90 bp TTTCTAGTGGTTGAGCTAGTTCTGAAATGCTCACCAGCTCTGAAATaGTGGCACGAGCTGCAAACTGTGCTAAATAGGATTTCACCAAAG +
Preference number: 5 (lower is better)
Translates to: FLVVELVLKCSPALK*WHELQTVLNRISPK
Trigger: CTTTGGTGAAATCCTATTTAGCACAGTTTGCAGCTCGTGCCATCATTTCAGAGCTGGTGAGCATTTCAGAACTAGCTCAACCACTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
CDS TCA 90 bp ACTGTAAGAAGCTGGACAGAAAGAGGTCTTGTTAGAACCCAACAGTaGGTTTTCTTGCTCAAGAGACAACTCTTAGTCTCCTACGCTTCT +
Preference number: 5 (lower is better)
Translates to: TVRSWTERGLVRTQQ*VFLLKRQLLVSYAS
Trigger: AGAAGCGTAGGAGACTAAGAGTTGTCTCTTGAGCAAGAAAACTCACTGTTGGGTTCTAACAAGACCTCTTTCTGTCCAGCTTCTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525606.5
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTCTCCACTTTGGCGGCTaGACAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLHFGG*TTKNLQ
Trigger: TTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAG...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSLFAAE*SSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLFAAE*SSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGTCGTTCTTTTTCGTTaGCGGAGTTGTTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQVVLFR*RSCLLR
Trigger: CCGCAGCAAACAACTCCGCAAACGAAAAAGAACGAC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TATGACCCCTTTAAGGATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: YDPFKDEFRLYTHIEELKSSRHS*SNFSGV
Trigger: TACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCT...CTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCATCCTTAAAGGGGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGGCTCTTCTAGGGCTTaGTCCACAATCAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVGSSRA*STISSM
Trigger: CATACTGCTGATTGTGGACAAAGCCCTAGAAGAGCC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQLGHQS*VHLLPI
Trigger: GATTGGCAGAAGATGCACCAAACTTTGATGGCCCAG...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCTGGGCCATCAAAGTTaGGTGCATCTTCTGCCAATC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLGHQS*VHLLPI
Trigger: GATTGGCAGAAGATGCACCAAACTTTGATGGCCCAG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCTGAATGTGGTGCTTaGCTTCTGTCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSECGA*LLSWLT
Trigger: GGTCAACCAGGACAGAAGCAAAGCACCACATTCAGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTGTCAAGAAAAGCCTaGCGAGGAACCCAATGGTGT +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSLSRKA*RGTQWC
Trigger: ACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGTCACTTCTCATCCCTaGAGCCATAGGAGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVVTSHP*SHRSRN
Trigger: ATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGAC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTGAGTGCGTGGTGGTaGTGCACTAGGAGGAATCAT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLSAWW*CTRRNH
Trigger: ATGATTCCTCCTAGTGCACAACCACCACGCACTCAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTGAGTGCGTGGTGGTaGTGCACTAGGAGGAATCAT +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLSAWW*CTRRNH
Trigger: ATGATTCCTCCTAGTGCACAACCACCACGCACTCAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAAAGCCTGCATGAAGTaGTCACTTGTGGCTATCCCT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSKACMK*SLVAIP
Trigger: AGGGATAGCCACAAGTGACAACTTCATGCAGGCTTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAAAGCCTGCATGAAGTaGTCACTTGTGGCTATCCCT +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSKACMK*SLVAIP
Trigger: AGGGATAGCCACAAGTGACAACTTCATGCAGGCTTT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCATGTCAACCTCCAGTTaGGGACACTGGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSMSTSS*GHWSNT
Trigger: TGTATTGGACCAGTGTCCCAAACTGGAGGTTGACAT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACCTGGAACAAAGCCTaGCCTTTTCCCGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTWNKA*PFPGNS
Trigger: AGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACACCTGGAACAAAGCCTaGCCTTTTCCCGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNTWNKA*PFPGNS
Trigger: AGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGGT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGGAATTTTTACTGCCTaGACGAGGCCAGCGACTAGA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVGIFTA*TRPATR
Trigger: TCTAGTCGCTGGCCTCGTCAAGGCAGTAAAAATTCC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACTCCACTTTGGCGGCTaGACAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLHFGG*TTKNLQ
Trigger: TTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACCTCCACTTTGGCGGCTaGACAACGAAGAATCTTCAA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLHFGG*TTKNLQ
Trigger: TTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAG...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQLFAAE*SSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNFSFAE*FAAELS
Trigger: TGACAACTCCGCAGCAAACAACTCCGCAAACGAAAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSTVSYT*ALLGLC
Trigger: ACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGCAGGAAACGAATCCTaGCTGGCAATTCCTTACTTA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSAGNES*LAIPYL
Trigger: TAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTGC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGCAGGAAACGAATCCTaGCTGGCAATTCCTTACTTA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSAGNES*LAIPYL
Trigger: TAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTGC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTGTCAAGAAAAGCCTaGCGAGGAACCCAATGGTGT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLSRKA*RGTQWC
Trigger: ACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTGTCAAGAAAAGCCTaGCGAGGAACCCAATGGTGT +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNLSRKA*RGTQWC
Trigger: ACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCATCGTCTTTGGTCCATaGTCAAGAAAAGCCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSIVFGP*SRKALR
Trigger: TCGCAAGGCTTTTCTTGACAATGGACCAAAGACGAT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGGCTTTTCATAAACTaGCCTCCCATCTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSWLFIN*PPISPN
Trigger: GTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAAAGCCTGCATGAAGTaGTCACTTGTGGCTATCCCT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVKACMK*SLVAIP
Trigger: AGGGATAGCCACAAGTGACAACTTCATGCAGGCTTT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAAAGCCTGCATGAAGTaGTCACTTGTGGCTATCCCT +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQKACMK*SLVAIP
Trigger: AGGGATAGCCACAAGTGACAACTTCATGCAGGCTTT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATGTCAACCTCCAGTTaGGGACACTGGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQMSTSS*GHWSNT
Trigger: TGTATTGGACCAGTGTCCCAAACTGGAGGTTGACAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATGTCAACCTCCAGTTaGGGACACTGGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNMSTSS*GHWSNT
Trigger: TGTATTGGACCAGTGTCCCAAACTGGAGGTTGACAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGCTCTAACTGTTCTTaGGAAGGAGCAGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSCSNCS*EGAEDE
Trigger: TTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGCA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTGCACAATTTAAGGCTTaGGCTGGTTCTTTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSAQFKA*AGSLVS
Trigger: GCTGACTAAAGAACCAGCCAAAGCCTTAAATTGTGC...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTAAAAGACTTGTGCACTaGCCCAGGCTCAAGGATATT +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSKRLVH*PRLKDI
Trigger: AATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAAAAGACTTGTGCACTaGCCCAGGCTCAAGGATATT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSKRLVH*PRLKDI
Trigger: AATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSRHS*SNFSGV
Trigger: TACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVTVSYT*ALLGLC
Trigger: ACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTATGTTTCCCAACATCTaGATCTTAGCAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSMFPNI*ILAMAL
Trigger: GAGAGCCATTGCTAAGATCAAGATGTTGGGAAACAT...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGCAGGAAACGAATCCTaGCTGGCAATTCCTTACTTA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQAGNES*LAIPYL
Trigger: TAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTGC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCAGGAAACGAATCCTaGCTGGCAATTCCTTACTTA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAGNES*LAIPYL
Trigger: TAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATCGTCTTTGGTCCATaGTCAAGAAAAGCCTTGCGA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQIVFGP*SRKALR
Trigger: TCGCAAGGCTTTTCTTGACAATGGACCAAAGACGAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAATCGTCTTTGGTCCATaGTCAAGAAAAGCCTTGCGA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVIVFGP*SRKALR
Trigger: TCGCAAGGCTTTTCTTGACAATGGACCAAAGACGAT...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATCGTCTTTGGTCCATaGTCAAGAAAAGCCTTGCGA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNIVFGP*SRKALR
Trigger: TCGCAAGGCTTTTCTTGACAATGGACCAAAGACGAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCTGCATCTTGACGAATTaGATTGATCGTCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSCILTN*IDRLWS
Trigger: GGACCAAAGACGATCAATCAAATTCGTCAAGATGCA...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGGCTTTTCATAAACTaGCCTCCCATCTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQWLFIN*PPISPN
Trigger: GTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCTGGGGCTGAAGCTTaGGCACTTGATTTTTATTCA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSGAEA*ALDFYS
Trigger: TGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGCTCTAACTGTTCTTaGGAAGGAGCAGAGGATGAA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCSNCS*EGAEDE
Trigger: TTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGCA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGAAGTAACATGCCTTTaGGGAAGTTGCTGTTATAGC +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSEVTCL*GSCCYS
Trigger: GCTATAACAGCAACTTCCCAAAAGGCATGTTACTTC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAGCACAATTTAAGGCTTaGGCTGGTTCTTTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVAQFKA*AGSLVS
Trigger: GCTGACTAAAGAACCAGCCAAAGCCTTAAATTGTGC...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGCACAATTTAAGGCTTaGGCTGGTTCTTTAGTCAGC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNAQFKA*AGSLVS
Trigger: GCTGACTAAAGAACCAGCCAAAGCCTTAAATTGTGC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAAAAGACTTGTGCACTaGCCCAGGCTCAAGGATATT +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQKRLVH*PRLKDI
Trigger: AATATCCTTGAGCCTGGGCAAGTGCACAAGTCTTTT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS TCA 90 bp GCTCAAGAGACAACTCTTAGTCTCCTACGCTTCTTTTCCAGTACATaGAACATTACCATATGCAGAAAACCATTCGTCTTACCTAGTCAT +
Preference number: 5 (lower is better)
Translates to: AQETTLSLLRFFSST*NITICRKPFVLPSH
Trigger: ATGACTAGGTAAGACGAATGGTTTTCTGCATATGGTAATGTTTCATGTACTGGAAAAGAAGCGTAGGAGACTAAGAGTTGTCTCTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525606.5
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSSRHS*SNFSGV
Trigger: TACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSSRHS*SNFSGV
Trigger: TACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATGTTTCCCAACATCTaGATCTTAGCAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQMFPNI*ILAMAL
Trigger: GAGAGCCATTGCTAAGATCAAGATGTTGGGAAACAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATGTTTCCCAACATCTaGATCTTAGCAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNMFPNI*ILAMAL
Trigger: GAGAGCCATTGCTAAGATCAAGATGTTGGGAAACAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAGCTCTCCAATGAATTaGATGTTTCCCAACATCTTG +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSSSPMN*MFPNIL
Trigger: CAAGATGTTGGGAAACATCAAATTCATTGGAGAGCT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGCATCTTGACGAATTaGATTGATCGTCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVCILTN*IDRLWS
Trigger: GGACCAAAGACGATCAATCAAATTCGTCAAGATGCA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCTGGGGCTGAAGCTTaGGCACTTGATTTTTATTCA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSGAEA*ALDFYS
Trigger: TGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTCTGGGGCTGAAGCTTaGGCACTTGATTTTTATTCA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQSGAEA*ALDFYS
Trigger: TGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCTGGGGCTGAAGCTTaGGCACTTGATTTTTATTCA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSGAEA*ALDFYS
Trigger: TGAATAAAAATCAAGTGCCAAAGCTTCAGCCCCAGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCGACAGGATGATTACTTaGCTTAACATCTCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSDRMIT*LNISGR
Trigger: TCTTCCTGAGATGTTAAGCAAAGTAATCATCCTGTC...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTGGATCCAACTTTATTaGCTTCAACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSWIQLY*LQQFLL
Trigger: GAGAAGGAACTGTTGAAGCAAATAAAGTTGGATCCA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGAAGTAACATGCCTTTaGGGAAGTTGCTGTTATAGC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNEVTCL*GSCCYS
Trigger: GCTATAACAGCAACTTCCCAAAAGGCATGTTACTTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGAAGTAACATGCCTTTaGGGAAGTTGCTGTTATAGC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQEVTCL*GSCCYS
Trigger: GCTATAACAGCAACTTCCCAAAAGGCATGTTACTTC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTTTCCCGGAAACTCTaGGGTTATATCTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFSRKL*GYIFFP
Trigger: TGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAATTCATCTTGTAATTaGGAAATTAGGAGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSNSSCN*EIRRRL
Trigger: CAGACGCCTCCTAATTTCCAAATTACAAGATGAATT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCCCATATCTTTGAGTaGGACTCTCTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSHIFE*DSLLLF
Trigger: GAAAAGAAGAAGAGAGTCCAACTCAAAGATATGGGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATCCCATATCTTTGAGTaGGACTCTCTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVSHIFE*DSLLLF
Trigger: GAAAAGAAGAAGAGAGTCCAACTCAAAGATATGGGA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp TTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCATTTCTCTTACACCATaGACAGCCTCATTTGCATTT +
Preference number: 5 (lower is better)
Translates to: LQRNEFSQWLGQMQLHHSISLTP*TASFAF
Trigger: AAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAAT...GCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGACAGGATGATTACTTaGCTTAACATCTCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNDRMIT*LNISGR
Trigger: TCTTCCTGAGATGTTAAGCAAAGTAATCATCCTGTC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGGCTATCCCTTCCTGTTaGAGTAAACTGATCAAAGAA +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQAIPSC*SKLIKE
Trigger: TTCTTTGATCAGTTTACTCAAACAGGAAGGGATAGC...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACGCTATCCCTTCCTGTTaGAGTAAACTGATCAAAGAA +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNAIPSC*SKLIKE
Trigger: TTCTTTGATCAGTTTACTCAAACAGGAAGGGATAGC...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTGGATCCAACTTTATTaGCTTCAACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQWIQLY*LQQFLL
Trigger: GAGAAGGAACTGTTGAAGCAAATAAAGTTGGATCCA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATGGATCCAACTTTATTaGCTTCAACAGTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVWIQLY*LQQFLL
Trigger: GAGAAGGAACTGTTGAAGCAAATAAAGTTGGATCCA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTTCTGCATTACTGGCTaGAAAGATAGTAGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSFCITG*KDSSSC
Trigger: ACAACTACTACTATCTTTCAAGCCAGTAATGCAGAA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTATTTTCCCGGAAACTCTaGGGTTATATCTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVFSRKL*GYIFFP
Trigger: TGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAAA...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTACATCATAGCAACAGTTCAAATTCTCACCATTaGTTTCACACCCACAAAAAC +
Preference number: 5 (lower is better)
Translates to: RNEFSQWLGQMQLHHSNSSNSHH*FHTHKN
Trigger: GTTTTTGTGGGTGTGAAACAAATGGTGAGAATTTGA...ACTGTTGCTATGATGTAACTGCATTTGACCTAACCACTGCGAAAATTCATTCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS TCA 90 bp ACAAACAAGTCAGCATTCTCTTACCTGGGAGCATTTTCTGCATATTaGCCTTGCTTTGTTGAAAAAGTTCTGTTAACCATTCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: TNKSAFSYLGAFSAY*PCFVEKVLLTILDL
Trigger: AAGATCGAGAATGGTTAACAGAACTTTTTCAACAAAGCAAGGTCAATATGCAGAAAATGCTCCCAGGTAAGAGAATGCTGACTTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS GCA 90 bp AATTTCTGCATTACTGGCTTGAAAGATAGTAGTAGTTGTTTTTCCTaGTCTAACTGTTCTTTGGAAGGAGCAGAGGATGAATCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: NFCITGLKDSSSCFS*SNCSLEGAEDESVS
Trigger: TGAAACAGATTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGCAGGAAAAACAACTACTACTATCTTTCAAGCCAGTAATGCAGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
ENST00000534272.1
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGAATTCATCTTGTAATTaGGAAATTAGGAGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQNSSCN*EIRRRL
Trigger: CAGACGCCTCCTAATTTCCAAATTACAAGATGAATT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACAATTCATCTTGTAATTaGGAAATTAGGAGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNNSSCN*EIRRRL
Trigger: CAGACGCCTCCTAATTTCCAAATTACAAGATGAATT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGATTTCTCTTACACCATaGACAGCCTCATTTGCATTT +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQISLTP*TASFAF
Trigger: AAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAAT...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACATTTCTCTTACACCATaGACAGCCTCATTTGCATTT +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNISLTP*TASFAF
Trigger: AAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAAT...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp ATTGTGAAAACATTACAGCGGAATGAATTTTCGCAGTGGTTAGGTCAAATGCAGTTCTGCATTACTGGCTaGAAAGATAGTAGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: IVKTLQRNEFSQWLGQMQFCITG*KDSSSC
Trigger: ACAACTACTACTATCTTTCAAGCCAGTAATGCAGAA...CTGCATTTGACCTAACCACTGCGAAAATTCATTCCGCTGTAATGTTTTCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTTCTGCATTACTGGCTaGAAAGATAGTAGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNFCITG*KDSSSC
Trigger: ACAACTACTACTATCTTTCAAGCCAGTAATGCAGAA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp CACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTAAACTCAAATTCTCACCATTaGTTTCACACCCACAAAAAC +
Preference number: 5 (lower is better)
Translates to: HFKGINDLSKLISFVQVNSNSHH*FHTHKN
Trigger: GTTTTTGTGGGTGTGAAACAAATGGTGAGAATTTGA...GTTTACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339995.11
ENST00000525681.6
ENST00000526148.6
CDS-3UTR CAA 90 bp AACCACTTCAAGGGCATTAACGATCTCTCAAAACTGATCAGTTTTGTGCAAGTACTCAGAACGAATCTTTaGAAAAAGCCACATTCTACT +
Preference number: 5 (lower is better)
Translates to: NHFKGINDLSKLISFVQVLRTNL*KKPHST
Trigger: AGTAGAATGTGGCTTTTTCAAAAGATTCGTTCTGAG...TACTTGCACAAAACTGATCAGTTTTGAGAGATCGTTAATGCCCTTGAAGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526148.6
CDS GCA 90 bp ATACAGATTTCATCTAGTCACATCCATCTCCTGGGAGTCAGAAAATaGCATGGATATCAAAACTTTCAAGTCTACATAAACTGTCATACA +
Preference number: 5 (lower is better)
Translates to: IQISSSHIHLLGVRK*HGYQNFQVYINCHT
Trigger: TGTATGACAGTTTATGTAGACTTGAAAGTTTTGATATCCATGGCATTTTCTGACTCCCAGGAGATGGATGTGACTAGATGAAATCTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS TCA 90 bp GAGATGTTATCTGGGAGCATTTTCTGCATATTGACCTTGCTTTGTTaGAAAAGTTCTGTTAACCATTCTCGATCTTGTAATTTAGCTAAC +
Preference number: 5 (lower is better)
Translates to: EMLSGSIFCILTLLC*KSSVNHSRSCNLAN
Trigger: GTTAGCTAAATTACAAGATCGAGAATGGTTAACAGAACTTTTTCAACAAAGCAAGGTCAATATGCAGAAAATGCTCCCAGATAACATCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528839.1
CDS CCA 72 bp GGACGCCTGCGGTTCCCTGGTCCCGCGCCAACGGCCTaGCCTTCCCTGCCGGCCCGCGTGCCTCCCGCCACG +
Preference number: 6 (lower is better)
Translates to: GRLRFPGPAPTA*PSLPARVPPAT
Trigger: CGTGGCGGGAGGCACGCGGGCCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS CCA 72 bp GCCGGGAGGCCAGGCTCCGGGACGCCTGCGGTTCCCTaGTCCCGCGCCAACGGCCTGGCCTTCCCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: AGRPGSGTPAVP*SRANGLAFPAG
Trigger: GCCGGCAGGGAAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS GCA 72 bp GCACAGCCGTGCCTCGGTCCGCCACGGCCTCGTCCCTaGAGGCGTCGGCCATCCGGCCATGACCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: AQPCLGPPRPRP*RRRPSGHDRTA
Trigger: CGCCGTGCGGTCATGGCCGGATGGCCGACGCCTGCAGGGACGAGGCCGTGGCGGACCGAGGCACGGCTGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS GCA 72 bp AGCACTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTaGGGTTCCCTGGTCCCGCGCCAACGGCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: STPRREARLRDA*GSLVPRQRPGL
Trigger: AAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525995.1
CDS GCA 72 bp TCCGAGCCACGCTCCCTCGCCGTCCGAGCACAGCCGTaGCTCGGTCCGCCACGGCCTCGTCCCTGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: SEPRSLAVRAQP*LGPPRPRPCRR
Trigger: ACGCCTGCAGGGACGAGGCCGTGGCGGACCGAGGCACGGCTGTGCTCGGACGGCGAGGGAGCGTGGCTCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS GCA 72 bp ATACCTCCCCGCCGGGAGGCCAGGCTCCGGGACGCCTaGGGTTCCCTGGTCCCGCGCCAACGGCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: IPPRREARLRDA*GSLVPRQRPGL
Trigger: AAGGCCAGGCCGTTGGCGCGGGACCAGGGAACCGCAGGCGTCCCGGAGCCTGGCCTCCCGGCGGGGAGGTAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524932.6
CDS TCA 72 bp ACGGCCTCGTCCCTGCAGGCGTCGGCCATCCGGCCATaGCCGCACGGCGGCCTGGCCAACACTGACGTTTTC +
Preference number: 6 (lower is better)
Translates to: TASSLQASAIRP*PHGGLANTDVF
Trigger: GAAAACGTCAGTGTTGGCCAGGCCGCCGTGCGGTCATGGCCGGATGGCCGACGCCTGCAGGGACGAGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524932.6
ENST00000525995.1
CDS GCA 72 bp TCGGGGACGGCCTCAAACTCAGCTCAGAGGAGTCGCTaGTGCAGCCGCCACTCGGTACCCGCTGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SGTASNSAQRSR*CSRHSVPAATS
Trigger: GGAGGTGGCAGCGGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTGAGCTGAGTTTGAGGCCGTCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000524932.6
ENST00000525972.5
ENST00000527419.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531507.5
ENST00000534246.1
CDS GCA 72 bp CGCGCGAGAGGGGGCCGGGTGTACAGGACTAGCACTTaGAGGCGGAAGACCAGGGCCACAACATGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RARGGRVYRTST*RRKTRATTWQQ
Trigger: CTGCTGCCATGTTGTGGCCCTGGTCTTCCGCCTGCAAGTGCTAGTCCTGTACACCCGGCCCCCTCTCGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp GGAGCATTCCTCCCACCCAGGCGCAAGTTAGGGAAGTaGTTCCGACAACCTCCCCGCGAGGCCCGGGTCGCT +
Preference number: 6 (lower is better)
Translates to: GAFLPPRRKLGK*FRQPPREARVA
Trigger: AGCGACCCGGGCCTCGCGGGGAGGTTGTCGGAAGCACTTCCCTAACTTGCGCCTGGGTGGGAGGAATGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531416.6
CDS CCA 72 bp TGTCCACCCTTTCGCCTCCTCCCCGTGGAGAGCTCGTaGAAAGACGCGCGAGAGGGGGCCGGGTGTACAGGA +
Preference number: 6 (lower is better)
Translates to: CPPFRLLPVESS*KDAREGAGCTG
Trigger: TCCTGTACACCCGGCCCCCTCTCGCGCGTCTTTCCACGAGCTCTCCACGGGGAGGAGGCGAAAGGGTGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526148.6
ENST00000527526.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp GGGACGGCCTCAAACTCAGCTCAGAGGAGTCGCTGCTaGAGCCGCCACTCGGTACCCGCTGCCACCTCCATA +
Preference number: 6 (lower is better)
Translates to: GTASNSAQRSRC*SRHSVPAATSI
Trigger: TATGGAGGTGGCAGCGGGTACCGAGTGGCGGCTGCAGCAGCGACTCCTCTGAGCTGAGTTTGAGGCCGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000524932.6
ENST00000525972.5
ENST00000527419.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531507.5
ENST00000534246.1
CDS TCA 72 bp CATCCGGCCATGACCGCACGGCGGCCTGGCCAACACTaGCGTTTTCCTTCTTCACCGAGAACTCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HPAMTARRPGQH*RFPSSPRTQQL
Trigger: CAGCTGCTGAGTTCTCGGTGAAGAAGGAAAACGTCAGTGTTGGCCAGGCCGCCGTGCGGTCATGGCCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524932.6
CDS CCA 72 bp ACTAGCACTTGCAGGCGGAAGACCAGGGCCACAACATaGCAGCAGGAACCTCCGCCCCGTTTTTCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: TSTCRRKTRATT*QQEPPPRFSLP
Trigger: AGGAAGGGAAAAACGGGGCGGAGGTTCCTGCTGCCATGTTGTGGCCCTGGTCTTCCGCCTGCAAGTGCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp CCCCAGGAACTCGCTGAAACGAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTTGGCGGCTTGACAACG +
Preference number: 6 (lower is better)
Translates to: PQELAETRSTPF*NRTLHFGGLTT
Trigger: CGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGCGAGTTCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530702.2
CDS GCA 72 bp GCCCGAAGAAGCACTGAAACGAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTTGGCGGCTTGACAACG +
Preference number: 6 (lower is better)
Translates to: ARRSTETRSTPF*NRTLHFGGLTT
Trigger: CGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGTGCTTCTTCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527526.6
ENST00000530211.6
ENST00000531416.6
ENST00000531647.6
ENST00000532082.6
ENST00000532570.6
ENST00000533485.1
CDS TCA 72 bp CCCCCTTCTGCAATCGCACTCTCCACTTTGGCGGCTTaGCAACGAAGAATCTTCACCGAGAACTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PPSAIALSTLAA*QRRIFTENSAA
Trigger: AGCTGCTGAGTTCTCGGTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530211.6
CDS CAA 72 bp ACCCCCTTCTGCAATCGCACTCTCCACTTTGGCGGCTaGACAACGAAGAATCTTCACCGAGAACTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TPFCNRTLHFGG*TTKNLHRELSS
Trigger: GCTGCTGAGTTCTCGGTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530211.6
CDS GCA 72 bp CTGTCCCAGAGGTGGTGTTTGAGTGCGTGGTGGTTGTaGACTAGGAGGAATCATAGTTATCTGGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LSQRWCLSAWWL*TRRNHSYLGLK
Trigger: CTTCAGCCCCAGATAACTATGATTCCTCCTAGTGCACAACCACCACGCACTCAAACACCACCTCTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000532383.5
CDS GCA 72 bp CAGGAATCCATTTCTGAAACGAGAAGCACCCCCTTCTaGAATCGCACTCTCCACTTTGGCGGCTTGACAACG +
Preference number: 6 (lower is better)
Translates to: QESISETRSTPF*NRTLHFGGLTT
Trigger: CGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTCGTTTCAGAAATGGATTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS CCA 72 bp GGTCCATTGTCAAGAAAAGCCTTGCGAGGAACCCAATaGTGTTCTCGCAACTCTACGGTATCCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPLSRKALRGTQ*CSRNSTVSCSR
Trigger: CCTGCTGCAGGATACCGTAGAGTTGCGAGAACACCATTGGGTTCCTCGCAAGGCTTTTCTTGACAATGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS CCA 72 bp AGGTGTCTGTCCCAGAGGTGGTGTTTGAGTGCGTGGTaGTTGTGCACTAGGAGGAATCATAGTTATCTGGGG +
Preference number: 6 (lower is better)
Translates to: RCLSQRWCLSAW*LCTRRNHSYLG
Trigger: CCCCAGATAACTATGATTCCTCCTAGTGCACAACCACCACGCACTCAAACACCACCTCTGGGACAGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000532383.5
CDS CCA 72 bp GAGAAGCACCCCCTTCTGCAATCGCACTCTCCACTTTaGCGGCTTGACAACGAAGAATCTTCACCGAGAACT +
Preference number: 6 (lower is better)
Translates to: EKHPLLQSHSPL*RLDNEESSPRT
Trigger: AGTTCTCGGTGAAGATTCTTCGTTGTCAAGCCGCCAAAGTGGAGAGTGCGATTGCAGAAGGGGGTGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530211.6
CDS CAA 72 bp TGTCTGTCCCAGAGGTGGTGTTTGAGTGCGTGGTGGTaGTGCACTAGGAGGAATCATAGTTATCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: CLSQRWCLSAWW*CTRRNHSYLGL
Trigger: CAGCCCCAGATAACTATGATTCCTCCTAGTGCACAACCACCACGCACTCAAACACCACCTCTGGGACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000532383.5
CDS TCA 72 bp GGAATTTTTACTGCCTTGACGAGGCCAGCGACTAGATaGGGTCTCTCCGAAAGCTCTTCAGCAGTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: GIFTALTRPATR*GLSESSSAVFP
Trigger: GGGGAAAACTGCTGAAGAGCTTTCGGAGAGACCTCATCTAGTCGCTGGCCTCGTCAAGGCAGTAAAAATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp TGGCTTTTCATAAACTTGCCTCCCATCTCTCCAAACTaGGATTGTGTGGGAGGCATGATGTGTCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: WLFINLPPISPN*DCVGGMMCPPW
Trigger: CCATGGGGGACACATCATGCCTCCCACACAATCGCAGTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp GTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAAACGAGAAGCACCCCCT +
Preference number: 6 (lower is better)
Translates to: VCCGVVISSSAS*RNPFLKREAPP
Trigger: AGGGGGTGCTTCTCGTTTCAGAAATGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528562.6
CDS TCA 72 bp AACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATAAACACCCCTAGATCC +
Preference number: 6 (lower is better)
Translates to: NGPSRKKSLLIP*AIGAGINTPRS
Trigger: GGATCTAGGGGTGTTTATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531647.6
CDS GCA 72 bp GTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTaGAGGAATCCATTTCTGAGCGTTTTGCCAACGAAG +
Preference number: 6 (lower is better)
Translates to: VCCGVVISSSAS*RNPFLSVLPTK
Trigger: CTTCGTTGGCAAAACGCTCAGAAATGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531507.5
CDS CCA 72 bp TTTGCTGGTCTTGGCAGGCTTTTCCTGGATAAGCGGTaGATTAGTTTTGAGACCAAGCTGAGGTGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FAGLGRLFLDKR*ISFETKLRCLS
Trigger: GGACAGACACCTCAGCTTGGTCTCAAAACTAATCCACCGCTTATCCAGGAAAAGCCTGCCAAGACCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000531180.1
ENST00000532383.5
CDS CCA 72 bp TTTTTACATGTTTACCACACCTGTTGCCAGCAGTCTTaGGATAGTGCTGAGGTGCACCCCTACTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: FLHVYHTCCQQS*DSAEVHPYFLL
Trigger: GAGGAGGAAGTAGGGGTGCACCTCAGCACTATCCCAAGACTGCTGGCAACAGGTGTGGTAAACATGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532383.5
ENST00000533485.1
CDS CCA 72 bp TCAGAATCACCTGAAGGGCTTGTTAATACAGATTGCTaGGCCCACCCAGTTTCTGCTTTCACTGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: SESPEGLVNTDC*AHPVSAFTGLG
Trigger: CCCCAAACCAGTGAAAGCAGAAACTGGGTGGGCCCAGCAATCTGTATTAACAAGCCCTTCAGGTGATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CAA 72 bp GATTGCTGGGCCCACCCAGTTTCTGCTTTCACTGGTTaGGGGTGGGGCCTAAGAATTTGCATGTCTAGTAAA +
Preference number: 6 (lower is better)
Translates to: DCWAHPVSAFTG*GWGLRICMSSK
Trigger: TTTACTAGACATGCAAATTCTTAGGCCCCACCCCAAACCAGTGAAAGCAGAAACTGGGTGGGCCCAGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CAA 90 bp TCAAGCTTGCCAAGCTCTCCAATGAATTTGATGTTTCCCAACATCTaGATCTTAGCAATGGCTCTCTGTTCCTCCTCCTCGGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSLPSSPMNLMFPNI*ILAMALCSSSSGRR
Trigger: CCTCCTCCCCGAGGAGGAGGAACAGAGAGCCATTGCTAAGATCAAGATGTTGGGAAACATCAAATTCATTGGAGAGCTTGGCAAGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532082.6
ENST00000532349.1
ENST00000532383.5
CDS TCA 72 bp AACGGTCCCTCCAGAAAGAAGTCACTTCTCATCCCTTaGGCCATAGGAGCAGGAATAAACACCCCTAGATCT +
Preference number: 6 (lower is better)
Translates to: NGPSRKKSLLIP*AIGAGINTPRS
Trigger: AGATCTAGGGGTGTTTATTCCTGCTCCTATGGCTCAAGGGATGAGAAGTGACTTCTTTCTGGAGGGACCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp ATCATGTCGTTCTTTTTCGTTTGCGGAGTTGTTTGCTaGGGAGTTGTCATCTCGTCTAGTGCTTCGTGCAGG +
Preference number: 6 (lower is better)
Translates to: IMSFFFVCGVVC*GVVISSSASCR
Trigger: CCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS GCA 72 bp TGCATCATGTCGTTCTTTTTCGTTTGCGGAGTTGTTTaGTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTGC +
Preference number: 6 (lower is better)
Translates to: CIMSFFFVCGVV*CGVVISSSASC
Trigger: GCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS GCA 72 bp AACTACAGACACGAGCAACATCACGTGGAAAATGTCTaGCCTAGGAATTTTTACTGCCTTGACGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: NYRHEQHHVENV*PRNFYCLDEAS
Trigger: GCTGGCCTCGTCAAGGCAGTAAAAATTCCTAGGGCAGACATTTTCCACGTGATGTTGCTCGTGTCTGTAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS GCA 72 bp GCATCAGAATCACCTGAAGGGCTTGTTAATACAGATTaGTGGGCCCACCCAGTTTCTGCTTTCACTGGTTTG +
Preference number: 6 (lower is better)
Translates to: ASESPEGLVNTD*WAHPVSAFTGL
Trigger: CAAACCAGTGAAAGCAGAAACTGGGTGGGCCCAGCAATCTGTATTAACAAGCCCTTCAGGTGATTCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 72 bp TGGGCCCACCCAGTTTCTGCTTTCACTGGTTTGGGGTaGGGCCTAAGAATTTGCATGTCTAGTAAATATTCC +
Preference number: 6 (lower is better)
Translates to: WAHPVSAFTGLG*GLRICMSSKYS
Trigger: GGAATATTTACTAGACATGCAAATTCTTAGGCCCCACCCCAAACCAGTGAAAGCAGAAACTGGGTGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CAA 72 bp CGTTCTTTTTCGTTTGCGGAGTTGTTTGCTGCGGAGTaGTCATCTCGTCTAGTGCTTCGTGCAGGAATCCAT +
Preference number: 6 (lower is better)
Translates to: RSFSFAELFAAE*SSRLVLRAGIH
Trigger: ATGGATTCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS CAA 72 bp AGTTTAAGGAGTTCTTCCTTTGACGGTGGTGGCTTTTaGCTGGTCTTGGCAGGCTTTTCCTGGATAAGCGGT +
Preference number: 6 (lower is better)
Translates to: SLRSSSFDGGGF*LVLAGFSWISG
Trigger: ACCGCTTATCCAGGAAAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGTCAAAGGAAGAACTCCTTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000531180.1
ENST00000532383.5
CDS CAA 72 bp TGGAACAGTAGTGTGCATCAGAATCACCTGAAGGGCTaGTTAATACAGATTGCTGGGCCCACCCAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: WNSSVHQNHLKG*LIQIAGPTQFL
Trigger: CAGAAACTGGGTGGGCCCAGCAATCTGTATTAACAAGCCCTTCAGGTGATTCTGATGCACACTACTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532152.5
ENST00000532383.5
CDS CAA 90 bp ACTTTCCTGAAGATTGCATCATGTCGTTCTTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTTCGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: TFLKIASCRSFSFAE*FAAELSSRLVLRAG
Trigger: TCCTGCACGAAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTCAGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS CAA 90 bp GTTAATACAGATTGCTGGGCCCACCCAGTTTCTGCTTTCACTGGTTaGGGGTGGGGCCTAAGAATTTGCATGTCTAGTAAATATTCCCAG +
Preference number: 6 (lower is better)
Translates to: VNTDCWAHPVSAFTG*GWGLRICMSSKYSQ
Trigger: CTGGGAATATTTACTAGACATGCAAATTCTTAGGCCCCACCCCAAACCAGTGAAAGCAGAAACTGGGTGGGCCCAGCAATCTGTATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 72 bp TTCACCAAAGGGATGTCAACCTCCAGTTTGGGACACTaGTCCAATACATTCAGGAAAGCCTGCATGAAGTTG +
Preference number: 6 (lower is better)
Translates to: FTKGMSTSSLGH*SNTFRKACMKL
Trigger: CAACTTCATGCAGGCTTTCCTGAATGTATTGGACCAGTGTCCCAAACTGGAGGTTGACATCCCTTTGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000531180.1
ENST00000532383.5
CDS CAA 72 bp GCAACTCTACGGTATCCTGCAGCAGGAAACGAATCCTaGCTGGCAATTCCTTACTTAACATCAAGGAGCACA +
Preference number: 6 (lower is better)
Translates to: ATLRYPAAGNES*LAIPYLTSRST
Trigger: TGTGCTCCTTGATGTTAAGTAAGGAATTGCCAGCAAGGATTCGTTTCCTGCTGCAGGATACCGTAGAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS CAA 90 bp GTTTCAGTTAGTTTAAGGAGTTCTTCCTTTGACGGTGGTGGCTTTTaGCTGGTCTTGGCAGGCTTTTCCTGGATAAGCGGTGGATTAGTT +
Preference number: 6 (lower is better)
Translates to: VSVSLRSSSFDGGGF*LVLAGFSWISGGLV
Trigger: AACTAATCCACCGCTTATCCAGGAAAAGCCTGCCAAGACCAGCAAAAAGCCACCACCGTCAAAGGAAGAACTCCTTAAACTAACTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000531180.1
ENST00000532383.5
CDS CAA 90 bp CTTCTGCCAATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGTCCACAATCCTCTTACTTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: LLPIADIAEHTVSYT*ALLGLCPQSSYFPE
Trigger: TTCAGGAAAGTAAGAGGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS TCA 72 bp AAGTTTGGTGCATCTTCTGCCAATCGCAGACATAGCTaGGCATACAGTGAGCTATACTTTGGCTCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: KFGASSANRRHS*AYSELYFGSSR
Trigger: CCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAGATGCACCAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527015.1
ENST00000527419.6
ENST00000531416.6
ENST00000532082.6
ENST00000532152.5
ENST00000532349.1
ENST00000532383.5
ENST00000534605.1
CDS TCA 72 bp AGGAAGAGAGGAAAATGGGTGCCACTTTCTAGTGGTTaGGCTAGTTCTGAAATGCTCACCAGCTCTGAAATG +
Preference number: 6 (lower is better)
Translates to: RKRGKWVPLSSG*ASSEMLTSSEM
Trigger: CATTTCAGAGCTGGTGAGCATTTCAGAACTAGCTCAACCACTAGAAAGTGGCACCCATTTTCCTCTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
CDS TCA 72 bp CCAAGTTGTCCTGTCCAGAGAGCAGAGCTTCACAAATaGTGTCCCCAAGTATGTAAGATCCATGTAGCAGAA +
Preference number: 6 (lower is better)
Translates to: PSCPVQRAELHK*CPQVCKIHVAE
Trigger: TTCTGCTACATGGATCTTACATACTTGGGGACATCATTTGTGAAGCTCTGCTCTCTGGACAGGACAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS GCA 72 bp ACCAGGTTAGCCACTGATTCACCTGGAACAAAGCCTTaGCTTTTCCCGGAAACTCTTGGGTTATATCTTCTT +
Preference number: 6 (lower is better)
Translates to: TRLATDSPGTKP*LFPETLGLYLL
Trigger: AAGAAGATATAACCCAAGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGGTGAATCAGTGGCTAACCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000532383.5
CDS CAA 72 bp ATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGTCCACAATCAGCAGTA +
Preference number: 6 (lower is better)
Translates to: IADIAEHTVSYT*ALLGLCPQSAV
Trigger: TACTGCTGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527419.6
ENST00000531416.6
ENST00000531507.5
ENST00000532082.6
ENST00000532152.5
CDS CAA 72 bp ATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGTCCACAATCCTCTTAC +
Preference number: 6 (lower is better)
Translates to: IADIAEHTVSYT*ALLGLCPQSSY
Trigger: GTAAGAGGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534605.1
CDS CAA 72 bp ACCCAACAGAAACCACGCCCCTTAAGATTAGGAGTCTaGATGGCTATTGCCTTAATTATACCGTCACATGGG +
Preference number: 6 (lower is better)
Translates to: TQQKPRPLRLGV*MAIALIIPSHG
Trigger: CCCATGTGACGGTATAATTAAGGCAATAGCCATCAAGACTCCTAATCTTAAGGGGCGTGGTTTCTGTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532383.5
ENST00000533485.1
CDS TCA 72 bp GTTGAGCTAGTTCTGAAATGCTCACCAGCTCTGAAATaGTGGCACGAGCTGCAAACTGTGCTAAATAGGATT +
Preference number: 6 (lower is better)
Translates to: VELVLKCSPALK*WHELQTVLNRI
Trigger: AATCCTATTTAGCACAGTTTGCAGCTCGTGCCATCATTTCAGAGCTGGTGAGCATTTCAGAACTAGCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
CDS GCA 72 bp TTTCCTGAAGATTGCATCATGTCGTTCTTTTTCGTTTaGGGAGTTGTTTGCTGCGGAGTTGTCATCTCGTCT +
Preference number: 6 (lower is better)
Translates to: FPEDCIMSFFFV*GVVCCGVVISS
Trigger: AGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTTCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS CAA 72 bp AAGATTGCATCATGTCGTTCTTTTTCGTTTGCGGAGTaGTTTGCTGCGGAGTTGTCATCTCGTCTAGTGCTT +
Preference number: 6 (lower is better)
Translates to: KIASCRSFSFAE*FAAELSSRLVL
Trigger: AAGCACTAGACGAGATGACAACTCCGCAGCAAACAACTCCGCAAACGAAAAAGAACGACATGATGCAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000525995.1
ENST00000526148.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000530702.2
ENST00000531416.6
ENST00000531507.5
ENST00000531647.6
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS CAA 72 bp ATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGTCCACAATCTACAGAA +
Preference number: 6 (lower is better)
Translates to: IADIAEHTVSYT*ALLGLCPQSTE
Trigger: TTCTGTAGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527015.1
ENST00000532349.1
ENST00000532383.5
CDS CAA 90 bp CCACTGATTCACCTGGAACAAAGCCTTGCCTTTTCCCGGAAACTCTaGGGTTATATCTTCTTTCCAAGCCAAGAAAGCTTCTTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: PLIHLEQSLAFSRKL*GYIFFPSQESFFFN
Trigger: ATTGAAGAAGAAGCTTTCTTGGCTTGGAAAGAAGATATAACCCAAGAGTTTCCGGGAAAAGGCAAGGCTTTGTTCCAGGTGAATCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000532383.5
CDS CAA 90 bp CTTCTGCCAATCGCAGACATAGCTGAGCATACAGTGAGCTATACTTaGGCTCTTCTAGGGCTTTGTCCACAATCTACAGAAAATGTCATT +
Preference number: 6 (lower is better)
Translates to: LLPIADIAEHTVSYT*ALLGLCPQSTENVI
Trigger: AATGACATTTTCTGTAGATTGTGGACAAAGCCCTAGAAGAGCCAAAGTATAGCTCACTGTATGCTCAGCTATGTCTGCGATTGGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527015.1
ENST00000532349.1
ENST00000532383.5
CDS CAA 90 bp GAAAACATGCACACTCAAATATTACTTACCTGGCTTTTCATAAACTaGCCTCCCATCTCTCCAAACTGCGATTGTGTGGGAGGCATGATG +
Preference number: 6 (lower is better)
Translates to: ENMHTQILLTWLFIN*PPISPNCDCVGGMM
Trigger: CATCATGCCTCCCACACAATCGCAGTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCAGGTAAGTAATATTTGAGTGTGCATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS TCA 72 bp TGTTATAGCAGTGCACCTGGAGAGCATACAGGGCACTaGCTTGTAGATCAACGTGATCATGAAGAAATTTCT +
Preference number: 6 (lower is better)
Translates to: CYSSAPGEHTGH*LVDQRDHEEIS
Trigger: AGAAATTTCTTCATGATCACGTTGATCTACAAGTCAGTGCCCTGTATGCTCTCCAGGTGCACTGCTATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
ENST00000534272.1
ENST00000534470.1
CDS CAA 72 bp CACACTCAAATATTACTTACCTGGCTTTTCATAAACTaGCCTCCCATCTCTCCAAACTGCGATTGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: HTQILLTWLFIN*PPISPNCDCVG
Trigger: TCCCACACAATCGCAGTTTGGAGAGATGGGAGGCAAGTTTATGAAAAGCCAGGTAAGTAATATTTGAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS TCA 72 bp TTACTTAACATCAAGGAGCACATTCGGGCAAAGTACTaGTCCATTAAGGACTTGGCTCGTTCATGGTCTAAT +
Preference number: 6 (lower is better)
Translates to: LLNIKEHIRAKY*SIKDLARSWSN
Trigger: ATTAGACCATGAACGAGCCAAGTCCTTAATGGATCAGTACTTTGCCCGAATGTGCTCCTTGATGTTAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS TCA 72 bp TTTCCTTCCAAAATCTCCAACATGCGGTCCTTATTCTaGTCAATTTCTGAAGAGACAAAGCCACCTGCATCA +
Preference number: 6 (lower is better)
Translates to: FPSKISNMRSLF*SISEETKPPAS
Trigger: TGATGCAGGTGGCTTTGTCTCTTCAGAAATTGATCAGAATAAGGACCGCATGTTGGAGATTTTGGAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 72 bp TTTTACTGCATCTTGACGAATTTGATTGATCGTCTTTaGTCCATTGTCAAGAAAAGCCTTGCGAGGAACCCA +
Preference number: 6 (lower is better)
Translates to: FYCILTNLIDRL*SIVKKSLARNP
Trigger: TGGGTTCCTCGCAAGGCTTTTCTTGACAATGGACCAAAGACGATCAATCAAATTCGTCAAGATGCAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531416.6
ENST00000532383.5
CDS CAA 90 bp ATGAGTTTAGACTCTACACCCACATTGAGGAGCTCAAGGCATAGCTaGTCAAACTTTTCAGGAGTAAGCTTATTTAGTATGCCTCTTACT +
Preference number: 6 (lower is better)
Translates to: MSLDSTPTLRSSRHS*SNFSGVSLFSMPLT
Trigger: AGTAAGAGGCATACTAAATAAGCTTACTCCTGAAAAGTTTGACAAGCTATGCCTTGAGCTCCTCAATGTGGGTGTAGAGTCTAAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000525972.5
ENST00000526148.6
ENST00000527419.6
ENST00000527526.6
ENST00000528562.6
ENST00000530211.6
ENST00000531416.6
ENST00000531507.5
ENST00000532082.6
ENST00000532152.5
ENST00000532383.5
ENST00000532570.6
CDS CAA 72 bp TCTTCATCGCTTCTATCTAGTGACAGGATGATTACTTaGCTTAACATCTCAGGAAGAAAGTGTTTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: SSSLLSSDRMIT*LNISGRKCLGA
Trigger: GGCTCCTAAACACTTTCTTCCTGAGATGTTAAGCAAAGTAATCATCCTGTCACTAGATAGAAGCGATGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531180.1
ENST00000532383.5
CDS CAA 90 bp ATCTCAGGAAGAAAGTGTTTAGGAGCCCTCATTTCTCTTACACCATaGACAGCCTCATTTGCATTTCCACTATTTAGATATTCAGTCACA +
Preference number: 6 (lower is better)
Translates to: ISGRKCLGALISLTP*TASFAFPLFRYSVT
Trigger: TGTGACTGAATATCTAAATAGTGGAAATGCAAATGAGGCTGTCAATGGTGTAAGAGAAATGAGGGCTCCTAAACACTTTCTTCCTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000530564.1
ENST00000531180.1
ENST00000532383.5
CDS TCA 72 bp GGCCTGTATTTTAGTGCTTGTATATTATGCTACAAATaGAGACTGAACTCGGACCCAAAGGAAAGGCAAATA +
Preference number: 6 (lower is better)
Translates to: GLYFSACILCYK*RLNSDPKERQI
Trigger: TATTTGCCTTTCCTTTGGGTCCGAGTTCAGTCTTCATTTGTAGCATAATATACAAGCACTAAAATACAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS GCA 72 bp ATTACTGGCTTGAAAGATAGTAGTAGTTGTTTTTCCTaGTCTAACTGTTCTTTGGAAGGAGCAGAGGATGAA +
Preference number: 6 (lower is better)
Translates to: ITGLKDSSSCFS*SNCSLEGAEDE
Trigger: TTCATCCTCTGCTCCTTCCAAAGAACAGTTAGAGCAGGAAAAACAACTACTACTATCTTTCAAGCCAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525606.5
ENST00000525681.6
ENST00000526148.6
ENST00000528839.1
ENST00000532383.5
ENST00000534272.1
CDS GCA 72 bp TCATCTAGTCACATCCATCTCCTGGGAGTCAGAAAATaGCATGGATATCAAAACTTTCAAGTCTACATAAAC +
Preference number: 6 (lower is better)
Translates to: SSSHIHLLGVRK*HGYQNFQVYIN
Trigger: GTTTATGTAGACTTGAAAGTTTTGATATCCATGGCATTTTCTGACTCCCAGGAGATGGATGTGACTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532383.5
CDS CCA 72 bp CAGTTATACAGATTTCATCTAGTCACATCCATCTCCTaGGAGTCAGAAAATGCCATGGATATCAAAACTTTC +
Preference number: 6 (lower is better)
Translates to: QLYRFHLVTSIS*ESENAMDIKTF
Trigger: GAAAGTTTTGATATCCATGGCATTTTCTGACTCCCAGGAGATGGATGTGACTAGATGAAATCTGTATAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527015.1
ENST00000532383.5
CDS CAA 90 bp TTACCATCAACATTTCTAGTTCGGTTTTCAAATTCATCTTGTAATTaGGAAATTAGGAGGCGTCTGAATGTGGTGCTTTGCTTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LPSTFLVRFSNSSCN*EIRRRLNVVLCFCP
Trigger: AGGACAGAAGCAAAGCACCACATTCAGACGCCTCCTAATTTCCAAATTACAAGATGAATTTGAAAACCGAACTAGAAATGTTGATGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527015.1
CDS CAA 90 bp TTCATTCAATTACAACGTATTTCAGATCCTGGCACTGTCACTGCATaGCAGATCTGTAAGACTAACCTAAAATGTACTCAAAACACTGAC +
Preference number: 6 (lower is better)
Translates to: FIQLQRISDPGTVTA*QICKTNLKCTQNTD
Trigger: GTCAGTGTTTTGAGTACATTTTAGGTTAGTCTTACAGATCTGCAATGCAGTGACAGTGCCAGGATCTGAAATACGTTGTAATTGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532383.5
ENST00000533485.1
CDS CAA 72 bp ACATTTCTAGTTCGGTTTTCAAATTCATCTTGTAATTaGGAAATTAGGAGGCGTCTGAATGTGGTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: TFLVRFSNSSCN*EIRRRLNVVLC
Trigger: GCAAAGCACCACATTCAGACGCCTCCTAATTTCCAAATTACAAGATGAATTTGAAAACCGAACTAGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000524932.6
ENST00000525681.6
ENST00000526148.6
ENST00000527015.1
ENST00000531416.6
ENST00000532082.6
ENST00000532349.1
ENST00000532383.5
CDS CAA 72 bp TGCATGAAGTTGTCACTTGTGGCTATCCCTTCCTGTTaGAGTAAACTGATCAAAGAACTTGCTTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: CMKLSLVAIPSC*SKLIKELAFSL
Trigger: TAAAGAAAAAGCAAGTTCTTTGATCAGTTTACTCAAACAGGAAGGGATAGCCACAAGTGACAACTTCATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531180.1
ENST00000532383.5
CDS CAA 90 bp TTTTCTTTATCTTCATCGCTTCTATCTAGTGACAGGATGATTACTTaGCTTAACATCTCAGGAAGAAAGTGTTTAGGAGCCCTCATTTCT +
Preference number: 6 (lower is better)
Translates to: FSLSSSLLSSDRMIT*LNISGRKCLGALIS
Trigger: AGAAATGAGGGCTCCTAAACACTTTCTTCCTGAGATGTTAAGCAAAGTAATCATCCTGTCACTAGATAGAAGCGATGAAGATAAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339995.11
ENST00000396525.7
ENST00000525681.6
ENST00000526148.6
ENST00000531180.1
ENST00000532383.5
CDS CCA 72 bp TTAAGATGTTCACAAATCCTTTATCTACATGAAGTTTaGGAGAGATGTTATCTGGGAGCATTTTCTGCATAT +
Preference number: 6 (lower is better)
Translates to: LRCSQILYLHEV*ERCYLGAFSAY
Trigger: ATATGCAGAAAATGCTCCCAGATAACATCTCTCCCAAACTTCATGTAGATAAAGGATTTGTGAACATCTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528839.1
CDS CAA 72 bp TTTCTACCAGTCTGGTTGATCAGTTCTAACTCTACTTaGTCAAACACACCACGTATTTCAAATTATTCTGTT +
Preference number: 6 (lower is better)
Translates to: FLPVWLISSNST*SNTPRISNYSV
Trigger: AACAGAATAATTTGAAATACGTGGTGTGTTTGACAAAGTAGAGTTAGAACTGATCAACCAGACTGGTAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532383.5