RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF1AX (Homo sapiens)

Ensembl gene IDs: ENSG00000173674

Ensembl transcript IDs: ENST00000379593.1, ENST00000379607.10

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGTGAAGAACCTGAAGCTGAGACAAGCAGGAGAATGTGCCAGTaGTCACCTGCAGGTAGAGGGCCAAGTAAGGGTGGGGGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: RGEEPEAETSRRMCQ*SPAGRGPSKGGGKG
Trigger: GCCTTTGCCCCCACCCTTACTTGGCCCTCTACCTGCAGGTGACCACTGGCACATTCTCCTGCTTGTCTCAGCTTCAGGTTCTTCACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379607.10
3UTR-3UTR TCA 90 bp GACAGGTACTGTTTTCATCATCCCCATCTTAGAGGTGAAGAACCTGAAGCTGAGAGTTCATTCTATACCTaGGAGTCTTGTGTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: DRYCFHHPHLRGEEPEAESSFYT*ESCVFS
Trigger: TGAAAAGACACAAGACTCTCAGGTATAGAATGAACT...CTCAGCTTCAGGTTCTTCACCTCTAAGATGGGGATGATGAAAACAGTACCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379607.10
3UTR-3UTR TCA 90 bp ACGTGTTCCTTCTATTGTACGAATCAAAGACTGCACGCAAAAGAAATGGGAAATCCCAACAATTCTGCATaGCAGGTACTGTTTTCATCA +
Preference number: 2 (lower is better)
Translates to: TCSFYCTNQRLHAKEMGNPNNSA*QVLFSS
Trigger: TGATGAAAACAGTACCTGTCATGCAGAATTGTTGGG...ATTTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTACAATAGAAGGAACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379607.10
3UTR CCA 72 bp GAACCTGAAGCTGAGACAAGCAGGAGAATGTGCCAGTaGTCACCTGCAGGTAGAGGGCCAAGTAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: EPEAETSRRMCQ*SPAGRGPSKGG
Trigger: CCCACCCTTACTTGGCCCTCTACCTGCAGGTGACCACTGGCACATTCTCCTGCTTGTCTCAGCTTCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379607.10
3UTR-3UTR CAA 90 bp ACGTGTTCCTTCTATTGTACGAATCAAAGACTGCACGCAAAAGAAATGGGAAATTCCAGTCAATACCGGTaGTTGTTAAGTCTGTATACA +
Preference number: 3 (lower is better)
Translates to: TCSFYCTNQRLHAKEMGNSSQYR*LLSLYT
Trigger: TGTATACAGACTTAACAACAACCGGTATTGACTGGA...ATTTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTACAATAGAAGGAACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379607.10
3UTR-3UTR CAA 90 bp ACGTGTTCCTTCTATTGTACGAATCAAAGACTGCACGCAAAAGAAATGGGAAATCTATACCTGAGAGTCTaGTGTCTTTTCACATTTTGC +
Preference number: 3 (lower is better)
Translates to: TCSFYCTNQRLHAKEMGNLYLRV*CLFTFC
Trigger: GCAAAATGTGAAAAGACACAAGACTCTCAGGTATAG...ATTTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTACAATAGAAGGAACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR TCA 90 bp GACAGGTACTGTTTTCATCATCCCCATCTTAGAGGTGAAGAACCTGAAGCTGAGGGGGCAAAGGCCCTTTaGCCCCAGGATCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: DRYCFHHPHLRGEEPEAEGAKAL*PQDPCS
Trigger: AGAGCATGGATCCTGGGGTCAAAGGGCCTTTGCCCC...CTCAGCTTCAGGTTCTTCACCTCTAAGATGGGGATGATGAAAACAGTACCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR TCA 90 bp CCAGGATCCATGCTCTCCCCTCTCCAGTACACTGCCTCACAAGTACCTAGCAACGTACTGGATATCAAGTaGAAAGAGCAGACACTGATC +
Preference number: 4 (lower is better)
Translates to: PGSMLSPLQYTASQVPSNVLDIK*KEQTLI
Trigger: GATCAGTGTCTGCTCTTTTCACTTGATATCCAGTAC...GTTGCTAGGTACTTGTGAGGCAGTGTACTGGAGAGGGGAGAGCATGGATCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR GCA 90 bp CCAGGATCCATGCTCTCCCCTCTCCAGTACACTGCCTCACAAGTACCTAGCAACGTACGAATCAAAGACTaGACGCAAAAGAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: PGSMLSPLQYTASQVPSNVRIKD*TQKKWE
Trigger: TTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTAC...GTTGCTAGGTACTTGTGAGGCAGTGTACTGGAGAGGGGAGAGCATGGATCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR TCA 90 bp ACGTGTTCCTTCTATTGTACGAATCAAAGACTGCACGCAAAAGAAATGGGAAATGAAAAGAGCAGACACTaGTCTAAGTACATTACATGT +
Preference number: 4 (lower is better)
Translates to: TCSFYCTNQRLHAKEMGNEKSRH*SKYITC
Trigger: ACATGTAATGTACTTAGATCAGTGTCTGCTCTTTTC...ATTTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTACAATAGAAGGAACACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR TCA 90 bp ACGTGTTCCTTCTATTGTACGAATCAAAGACTGCACGCAAAAGAAATGGGAAATTTACATCATTCCATATaGTGGGAAAGGAAACCTCTA +
Preference number: 4 (lower is better)
Translates to: TCSFYCTNQRLHAKEMGNLHHSI*WERKPL
Trigger: TAGAGGTTTCCTTTCCCATCATATGGAATGATGTAA...ATTTCCCATTTCTTTTGCGTGCAGTCTTTGATTCGTACAATAGAAGGAACACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR CAA 90 bp CCAGGATCCATGCTCTCCCCTCTCCAGTACACTGCCTCACAAGTACCTAGCAACTACGTGTTCCTTCTATaGTACGAATCAAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: PGSMLSPLQYTASQVPSNYVFLL*YESKTA
Trigger: TGCAGTCTTTGATTCGTACAATAGAAGGAACACGTA...GTTGCTAGGTACTTGTGAGGCAGTGTACTGGAGAGGGGAGAGCATGGATCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR CAA 90 bp GAGGTGAAGAACCTGAAGCTGAGACAAGCAGGAGAATGTGCCAGTGGTCACCTGCTATACCTGAGAGTCTaGTGTCTTTTCACATTTTGC +
Preference number: 5 (lower is better)
Translates to: EVKNLKLRQAGECASGHLLYLRV*CLFTFC
Trigger: GCAAAATGTGAAAAGACACAAGACTCTCAGGTATAG...CAGGTGACCACTGGCACATTCTCCTGCTTGTCTCAGCTTCAGGTTCTTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS-3UTR CAA 90 bp GACAGGTACTGTTTTCATCATCCCCATCTTAGAGGTGAAGAACCTGAAGCTGAGTCCAGTCAATACCGGTaGTTGTTAAGTCTGTATACA +
Preference number: 5 (lower is better)
Translates to: DRYCFHHPHLRGEEPEAESSQYR*LLSLYT
Trigger: TGTATACAGACTTAACAACAACCGGTATTGACTGGA...CTCAGCTTCAGGTTCTTCACCTCTAAGATGGGGATGATGAAAACAGTACCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379607.10
CDS TCA 72 bp TCAATATCTTCATCATCATCTCCAATGTCATCAAACTaGATTTCATCATCATCTCCAGGACCAAATGTATCA +
Preference number: 6 (lower is better)
Translates to: SISSSSSPMSSN*ISSSSPGPNVS
Trigger: TGATACATTTGGTCCTGGAGATGATGATGAAATTCAGTTTGATGACATTGGAGATGATGATGAAGATATTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379593.1
ENST00000379607.10