RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFS (Homo sapiens)

Ensembl gene IDs: ENSG00000100842

Ensembl transcript IDs: ENST00000216733.8, ENST00000351354.3, ENST00000429593.6

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCGTAGTGTGTGTCCCATAGGTATGGCTGCTGAGCACCAGGGCTaGTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACAGCA +
Preference number: 1 (lower is better)
Translates to: FRSVCPIGMAAEHQG*SPCSQEAESGRQTA
Trigger: TGCTGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGCCATACCTATGGGACACACACTACGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR TCA 90 bp GGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAACAGGAAAAGAGAGAGGCTCTATGT +
Preference number: 1 (lower is better)
Translates to: GQFMSCPHSQLTVQC*SSRAKKQEKREALC
Trigger: ACATAGAGCCTCTCTCTTTTCCTGTTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR GCA 90 bp GACTTATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTaGAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCCA +
Preference number: 1 (lower is better)
Translates to: DLFVYPTRTIHSQYT*RTVPGASWEQRTCP
Trigger: TGGACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR GCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCAGGGTTTATTAAGGTaGACACCCATGTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGQGLLR*TPMSEP
Trigger: GGGCTCAGACATGGGTGTGCACCTTAATAAACCCTG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGAGAGAGGCTCTATGTaGCCCCAGGTTTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKERGSM*PQVSAT
Trigger: GGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR CCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGAGAGAGGCTCTATGTaGCCCCAGGTTTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLERGSM*PQVSAT
Trigger: GGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGGACAGTTTATGTCTTaGCCGCACTCTCAGCTAACA +
Preference number: 2 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFGQFMS*PHSQLT
Trigger: TGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR TCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR TCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR TCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCATAGGTATGGCTGCTaGGCACCAGGGCTGCTCACC +
Preference number: 2 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCHRYGC*APGLLT
Trigger: GGTGAGCAGCCCTGGTGCTCAGCAGCCATACCTATG...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR TCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWLTVQC*SSRAKK
Trigger: TTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR GCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGGACAGTTTATGTCTTaGCCGCACTCTCAGCTAACA +
Preference number: 2 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKGQFMS*PHSQLT
Trigger: TGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGAGAGAGGCTCTATGTaGCCCCAGGTTTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: IHNILAELCLARHGSRELERGSM*PQVSAT
Trigger: GGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTC...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR TCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGGACAGTTTATGTCTTaGCCGCACTCTCAGCTAACA +
Preference number: 2 (lower is better)
Translates to: HNILAELCLARHGSRELVGQFMS*PHSQLT
Trigger: TGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR TCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGGAGAAGACACCTCTGTaGGAGGTTGAGATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: FKLWTVYVLPALSANSAVEKTPL*EVEMSR
Trigger: TCTGCTCATCTCAACCTCTCACAGAGGTGTCTTCTC...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR-3UTR TCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGLTVQC*SSRAKK
Trigger: TTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAG...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR GCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCAGGGCTGCTCACCATaGTCCCAAGAAGCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: YLCIPLEQYIHNILAELCQGCSP*SQEAES
Trigger: TGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTG...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR TCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCGAGAAGACACCTCTGTaGGAGGTTGAGATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: YLCIPLEQYIHNILAELCEKTPL*EVEMSR
Trigger: TCTGCTCATCTCAACCTCTCACAGAGGTGTCTTCTC...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR CAA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR GCA 72 bp ATAGGTATGGCTGCTGAGCACCAGGGCTGCTCACCATaGTCCCAAGAAGCAGAGTCAGGGAGGCAGACAGCA +
Preference number: 3 (lower is better)
Translates to: IGMAAEHQGCSP*SQEAESGRQTA
Trigger: TGCTGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGCCATACCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR CAA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACATGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR-3UTR CAA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
3UTR TCA 72 bp TGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCCAGTaGATAGTTGTTGAAGAAAGGAGTAAAATCTCCCCC +
Preference number: 3 (lower is better)
Translates to: CLARHGSRELVQ*IVVEERSKISP
Trigger: GGGGGAGATTTTACTCCTTTCTTCAACAACTATTCACTGGACAAGTTCTCTGCTCCCATGACGCGCCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR GCA 72 bp CTAGAACAATACATTCACAATATACTTGCAGAACTGTaGCTGGCGCGTCATGGGAGCAGAGAACTTGTCCAG +
Preference number: 3 (lower is better)
Translates to: LEQYIHNILAEL*LARHGSRELVQ
Trigger: CTGGACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCCAAGGGCGCGCGCTaGGTGCTGTCCCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPSKGAR*VLSPRP
Trigger: AGGCCGCGGGGACAGCACGCAGCGCGCGCCCTTGGA...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTGGCTGCCCCGCACCATaGTCCGCGGCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPGCPAP*SAASSP
Trigger: GGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCC...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTCCCAGCTGTGGCGCCTaGGTCGTGGCCTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPPSCGA*VVASAK
Trigger: CTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGG...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCCCAGCTGTGGCGCCTaGGTCGTGGCCTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGPSCGA*VVASAK
Trigger: CTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCCCGCCCTCCCCGTCTaGCAGCAGTTCCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFPALPV*QQFLGC
Trigger: GCACCCGAGGAACTGCTGGCAGACGGGGAGGGCGGG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGAGGCCGGTCCTGGATaGTGCCCTTCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFEAGPG*CPSGLG
Trigger: CCCCAGGCCGGAAGGGCAGCATCCAGGACCGGCCTC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGGAGGCCGGTCCTGGATaGTGCCCTTCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGREAGPG*CPSGLG
Trigger: CCCCAGGCCGGAAGGGCAGCATCCAGGACCGGCCTC...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACAGGACAGGCTCTCAGCTaGGGGGAGCCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTGQALS*GEPGPV
Trigger: CACAGGCCCCGGCTCCCCTCAGCTGAGAGCCTGTCC...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCTCCTCTCCAGGGGGCTaGGGGGCAACCCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFSSPGG*GATRVR
Trigger: TCTGACCCGGGTTGCCCCGCAGCCCCCTGGAGAGGA...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGGCACCCGGAGGGCGGTaGGGGGCACATCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRAPGGR*GAHRRP
Trigger: AGGTCTACGATGTGCCCCCCACCGCCCTCCGGGTGC...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGGGCAGAGGCCGGTCCTaGATGCTGCCCTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRGRGRS*MLPFRP
Trigger: AGGCCGGAAGGGCAGCATCCAGGACCGGCCTCTGCC...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGCTGGGTCGCTGGAGTaGCCGCTTCGGCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFAGSLE*PLRPRH
Trigger: GTGTCTGGGCCGAAGCGGCCACTCCAGCGACCCAGC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCTGCGGCGACCCCGCTaGGAGGAAGGGAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFLRRPR*EEGRAR
Trigger: TCTCGCTCTCCCTTCCTCCCAGCGGGGTCGCCGCAG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGGGACAGGCTCTCAGCTaGGGGGAGCCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWGQALS*GEPGPV
Trigger: CACAGGCCCCGGCTCCCCTCAGCTGAGAGCCTGTCC...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGACTGGACATCAGGGCTaGCACGGCTGCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRTGHQG*HGCLQG
Trigger: GCCCTGCAGGCAGCCGTGGCAGCCCTGATGTCCAGT...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATCGCACCCCCGGCGGTaGGGCGGTTTTCACGCGCGC +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGSHPRR*GGFHAR
Trigger: GCGCGCGTGAAAACCGCCGCACCGCCGGGGGTGCGA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR GCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTAGGCGGGCGCTGGGCTaGGCTCGACGCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTRRALG*ARRLSR
Trigger: CCTGGAGAGGCGTCGAGCGCAGCCCAGCGCCCGCCT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCGTGGCGCCTGAGTCGTaGCCTCCGCCAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGVAPES*PPPRLE
Trigger: CTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCAC...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGGCTGCCCCGCACCATaGTCCGCGGCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGGCPAP*SAASSP
Trigger: GGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTGGCTGCCCCGCACCATaGTCCGCGGCCTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTGCPAP*SAASSP
Trigger: GGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCC...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCTGGACAGGGCCGAGCTaGGGGCGGCACCACATACAC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFWTGPS*GRHHIH
Trigger: GTGTATGTGGTGCCGCCCCCAGCTCGGCCCTGTCCA...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGGGTGGACACAACCAGTaGCTCCCCTGGGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRGGHNQ*LPWGQG
Trigger: GCCCTGTCCCCAGGGGAGCCACTGGTTGTGTCCACC...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGCGTGGCCGTGGGGCTaGGTCGCTGGAGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKAWPWG*VAGVAA
Trigger: AGCGGCCACTCCAGCGACCCAGCCCCACGGCCACGC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTAGGCCCCCGAGAGCGTaGCCGTGGGGCTGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTRPPRA*PWGWVA
Trigger: AGCGACCCAGCCCCACGGCCACGCTCTCGGGGGCCT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR GCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGGACTTCAGCGGTGGCTaGCCCGCACCATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWDFSGG*PAPWSA
Trigger: CGCGGACCATGGTGCGGGGCAGCCACCGCTGAAGTC...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACAGAGGGGCAGAGGCTaGCAGCCGGCCCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKQRGRG*QPAQGV
Trigger: GACACCCTGGGCCGGCTGGCAGCCTCTGCCCCTCTG...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCAGAGGGGCAGAGGCTaGCAGCCGGCCCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLQRGRG*QPAQGV
Trigger: GACACCCTGGGCCGGCTGGCAGCCTCTGCCCCTCTG...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCACAGTGGCCCGCAATaGCTGGCCCAGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFHSGPQ*LAQCCT
Trigger: GGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCACAGTGGCCCGCAATaGCTGGCCCAGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGHSGPQ*LAQCCT
Trigger: GGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTACGCTTGCCCCAAGTTaGCTGGAGCCAAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPTLAPS*LEPKAP
Trigger: GGGGGCCTTTGGCTCCAGGCAACTTGGGGCAAGCGT...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTATCCAAGGGCGCGCGCTaGGTGCTGTCCCCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVSKGAR*VLSPRP
Trigger: AGGCCGCGGGGACAGCACGCAGCGCGCGCCCTTGGA...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCACGTGGCAATGGCCATaGCTTTGGCCTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGTWQWP*LWPPAQ
Trigger: CTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGT...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGCTGCCCTTCCGGCCTaGGGCAGGAGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKAALPA*GRRGHW
Trigger: CCAGTGCCCTCTCCTGCCCCAGGCCGGAAGGGCAGC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGGCTGCCCTTCCGGCCTaGGGCAGGAGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQAALPA*GRRGHW
Trigger: CCAGTGCCCTCTCCTGCCCCAGGCCGGAAGGGCAGC...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCATCTCCCTGCCCTCTaGATCCCCCTCGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFHLPAL*IPLDLG
Trigger: CCCAAGGTCGAGGGGGATCCAGAGGGCAGGGAGATG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAACCAGTGGCTCCCCTaGGGACAGGGCCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWNQWLP*GQGLLR
Trigger: CCGCAGGAGGCCCTGTCCCCAGGGGAGCCACTGGTT...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGTGGGGCTGGGTCGCTaGAGTGGCCGCTTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKVGLGR*SGRFGP
Trigger: TGGGCCGAAGCGGCCACTCCAGCGACCCAGCCCCAC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGACCGAGAGCGTGGCCGTaGGGCTGGGTCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGPRAWP*GWVAGV
Trigger: CACTCCAGCGACCCAGCCCCACGGCCACGCTCTCGG...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR TCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGGGGGCCTAGATCCCTaGGCTTTGTCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFGGLDP*ALSMPF
Trigger: GAAGGGCATGGACAAAGCTCAGGGATCTAGGCCCCC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATCCCCTGTGCAGGCCTaGTCCGGGGGCCTAGATCCC +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGSPVQA*SGGLDP
Trigger: GGGATCTAGGCCCCCGGATCAGGCCTGCACAGGGGA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAATCCCCTGTGCAGGCCTaGTCCGGGGGCCTAGATCCC +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKSPVQA*SGGLDP
Trigger: GGGATCTAGGCCCCCGGATCAGGCCTGCACAGGGGA...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGAAAAGGCGCGGGGGCTaGTTAGCCTGGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRKRRGG*LAWVLD
Trigger: GTCCAGTACCCAGGCTAATCAGCCCCCGCGCCTTTT...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTACAAACACCAGGCGATaGGCAGCCACCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPTNTRR*AATTTL
Trigger: GAGGGTGGTGGTGGCTGCTCATCGCCTGGTGTTTGT...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCATAGGTATGGCTGCTaGGCACCAGGGCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRHRYGC*APGLLT
Trigger: GGTGAGCAGCCCTGGTGCTCAGCAGCCATACCTATG...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGCCCGCCCTCCCCGTCTaGCAGCAGTTCCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQPALPV*QQFLGC
Trigger: GCACCCGAGGAACTGCTGGCAGACGGGGAGGGCGGG...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR GCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGGCCGGTCCTGGATGCTaGCCTTCCGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQAGPGC*PSGLGQ
Trigger: CTGCCCCAGGCCGGAAGGGCAGCATCCAGGACCGGC...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCATCCTCCATCTCCCTaGCCTCTGGATCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRHPPSP*PLDPPR
Trigger: TCGAGGGGGATCCAGAGGGCAGGGAGATGGAGGATG...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGGTTCAGGATCCCCTGTaGAGGCCTGATCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWVQDPL*RPDPGA
Trigger: GGCCCCCGGATCAGGCCTGCACAGGGGATCCTGAAC...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCAATGCCTGGCCCAGTaGTGTACCTGCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFQCLAQ*CTCSPD
Trigger: GTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACAGGGTCGACGTGGCAATaGCCATGGCTTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTGSTWQ*PWLWPP
Trigger: GGGAGGCCAAAGCCATGGCCATTGCCACGTCGACCC...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTAGTCATAGGGGCCACTaGAGGGCACCCGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTSHRGH*RAPGGR
Trigger: CCGCCCTCCGGGTGCCCTCCAGTGGCCCCTATGACT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTCTTCTGGCCAGAAGCTaGGCCAGGGTGTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPLLARS*ARVSWS
Trigger: TGACCAGGACACCCTGGCCCAGCTTCTGGCCAGAAG...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCTTCTGGCCAGAAGCTaGGCCAGGGTGTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGLLARS*ARVSWS
Trigger: TGACCAGGACACCCTGGCCCAGCTTCTGGCCAGAAG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTGGCAGAGGCCGGTCCTaGATGCTGCCCTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTGRGRS*MLPFRP
Trigger: AGGCCGGAAGGGCAGCATCCAGGACCGGCCTCTGCC...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCGATCCCCCTCGACCTTaGGGCCTCCATAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGDPPRP*GLHNQA
Trigger: TGCCTGGTTATGGAGGCCCCAAGGTCGAGGGGGATC...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAACCAGTGGCTCCCCTaGGGACAGGGCCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQNQWLP*GQGLLR
Trigger: CCGCAGGAGGCCCTGTCCCCAGGGGAGCCACTGGTT...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACAACCACCCTCTTGCTGTaGGGCACGAAAAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTTTLLL*GTKRRG
Trigger: CCCGCGCCTTTTCGTGCCCCACAGCAAGAGGGTGGT...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACACTTGGATGGCAGGGCTaGATGGGTAGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTLGWQG*MGSPGQ
Trigger: CTGCCCTGGGCTACCCATCCAGCCCTGCCATCCAAG...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGCCGGGGCGGTTGGGCTaGACGAGCGAGTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQPGRLG*TSEFRG
Trigger: GCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGG...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCACACCGACGTGGCAATaGCCATGGCTTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFTPTWQ*PWLWPP
Trigger: GGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGT...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTATCCCCTGTGCAGGCCTaGTCCGGGGGCCTAGATCCC +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVSPVQA*SGGLDP
Trigger: GGGATCTAGGCCCCCGGATCAGGCCTGCACAGGGGA...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTAGGGAGAGCGAGAACTaGGACGCTTGCCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPRESEN*DACPKL
Trigger: CAACTTGGGGCAAGCGTCTCAGTTCTCGCTCTCCCT...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCCAGCGCCCTCTCTCTaGAGGACCCGTAGGACATCC +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWPAPSL*RTRRTS
Trigger: GGATGTCCTACGGGTCCTGCAGAGAGAGGGCGCTGG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTGTGGCGCCTGAGTCGTaGCCTCCGCCAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTVAPES*PPPRLE
Trigger: CTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCAC...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTTCTAGCCCCCAGCTGTaGCGCCTGAGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTSSPQL*RLSRGL
Trigger: GAGGCCACGACTCAGGCGCCACAGCTGGGGGCTAGA...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGTATGGTGAGCCAGGCTaGGCTGGGGACGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWYGEPG*AGDAGE
Trigger: CTCTCCTGCGTCCCCAGCCCAGCCTGGCTCACCATA...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGGCACCCGGAGGGCGGTaGGGGGCACATCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQAPGGR*GAHRRP
Trigger: AGGTCTACGATGTGCCCCCCACCGCCCTCCGGGTGC...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGGCTCCAGGGGGCTCTaGAGAAGGGGGAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVGSRGL*RRGSLW
Trigger: CCAGAGGCTCCCCCTTCTCCAGAGCCCCCTGGAGCC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGGCAGAGGCCGGTCCTaGATGCTGCCCTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVGRGRS*MLPFRP
Trigger: AGGCCGGAAGGGCAGCATCCAGGACCGGCCTCTGCC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAAACCAGTGGCTCCCCTaGGGACAGGGCCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVNQWLP*GQGLLR
Trigger: CCGCAGGAGGCCCTGTCCCCAGGGGAGCCACTGGTT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCGCCGGGGCGGTTaGGCTGGACGAGCGAGTTTA +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQSRRGG*AGRASL
Trigger: TAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCT...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAAGCCGCCGGGGCGGTTaGGCTGGACGAGCGAGTTTA +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKSRRGG*AGRASL
Trigger: TAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCT...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCAGGCTCGGTTTTGCTaGCTTCAGCGGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLQARFC*LQRWLP
Trigger: GGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTG...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGGACAGGCTCTCAGCTaGGGGGAGCCGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVGQALS*GEPGPV
Trigger: CACAGGCCCCGGCTCCCCTCAGCTGAGAGCCTGTCC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAAAAGGCGCGGGGGCTaGTTAGCCTGGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWKRRGG*LAWVLD
Trigger: GTCCAGTACCCAGGCTAATCAGCCCCCGCGCCTTTT...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCATAGGTATGGCTGCTaGGCACCAGGGCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWHRYGC*APGLLT
Trigger: GGTGAGCAGCCCTGGTGCTCAGCAGCCATACCTATG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGTTCAGGATCCCCTGTaGAGGCCTGATCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVVQDPL*RPDPGA
Trigger: GGCCCCCGGATCAGGCCTGCACAGGGGATCCTGAAC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAACTGGACATCAGGGCTaGCACGGCTGCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVTGHQG*HGCLQG
Trigger: GCCCTGCAGGCAGCCGTGGCAGCCCTGATGTCCAGT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCCAGAGGGGCAGAGGCTaGCAGCCGGCCCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVQRGRG*QPAQGV
Trigger: GACACCCTGGGCCGGCTGGCAGCCTCTGCCCCTCTG...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATGCAGCCCTGACCTGTaGTCTCAGAGGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGCSPDL*SQRGRG
Trigger: GCCTCTGCCCCTCTGAGAGCACAGGTCAGGGCTGCA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCACAGTGGCCCGCAATaGCTGGCCCAGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTHSGPQ*LAQCCT
Trigger: GGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGGAGGAGCAGAGCTGTaGCAAAGGACCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFGGAEL*QRTFME
Trigger: CTCCATGAAGGTCCTTTGGCACAGCTCTGCTCCTCC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCAGGGCTGCTCACCATaGTCCCAAGAAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFQGCSP*SQEAES
Trigger: TGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGGAAGGACAGCTCCTaGGGGGACTCAGCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTRKDSS*GDSAVL
Trigger: CAACACCGCTGAGTCCCCCCAGGAGCTGTCCTTCCG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGTGGACAGGGCCGAGCTaGGGGCGGCACCACATACAC +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQWTGPS*GRHHIH
Trigger: GTGTATGTGGTGCCGCCCCCAGCTCGGCCCTGTCCA...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAACCCGGGTCAGAGGGTaGGAAAAGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGTRVRG*EKEAGQ
Trigger: CTGCCCTGCCTCCTTTTCCCACCCTCTGACCCGGGT...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTACCCGGGTCAGAGGGTaGGAAAAGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTTRVRG*EKEAGQ
Trigger: CTGCCCTGCCTCCTTTTCCCACCCTCTGACCCGGGT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAAGGGTGTCCTGGTCATaGGAGGCCAAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGRVSWS*EAKAPG
Trigger: CCCTGGAGCCTTGGCCTCCCATGACCAGGACACCCT...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATGGGCCAGGGTGTCCTaGTCATGGGAGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGWARVS*SWEAKA
Trigger: AGCCTTGGCCTCCCATGACCAGGACACCCTGGCCCA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGTGGGCCAGGGTGTCCTaGTCATGGGAGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQWARVS*SWEAKA
Trigger: AGCCTTGGCCTCCCATGACCAGGACACCCTGGCCCA...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCATCTCCCTGCCCTCTaGATCCCCCTCGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLHLPAL*IPLDLG
Trigger: CCCAAGGTCGAGGGGGATCCAGAGGGCAGGGAGATG...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACATCTCCCTGCCCTCTaGATCCCCCTCGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKHLPAL*IPLDLG
Trigger: CCCAAGGTCGAGGGGGATCCAGAGGGCAGGGAGATG...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTCCCTCGTACTCATTGTaGTGTCCTGCTGGGTCATCC +
Preference number: 4 (lower is better)
Translates to: PSSLRLLWGEALRSFREPPSYSL*CPAGSS
Trigger: GGATGACCCAGCAGGACACCACAATGAGTACGAGGG...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCCCTCGTACTCATTGTaGTGTCCTGCTGGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGPSYSL*CPAGSS
Trigger: GGATGACCCAGCAGGACACCACAATGAGTACGAGGG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGGTGGACACAACCAGTaGCTCCCCTGGGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVGGHNQ*LPWGQG
Trigger: GCCCTGTCCCCAGGGGAGCCACTGGTTGTGTCCACC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTACCACCCTCTTGCTGTaGGGCACGAAAAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTTTLLL*GTKRRG
Trigger: CCCGCGCCTTTTCGTGCCCCACAGCAAGAGGGTGGT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAGTGGCCCGCAATGCCTaGCCCAGTGCTGTACCTGCA +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKVARNA*PSAVPA
Trigger: TGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCAC...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGTGGCCCGCAATGCCTaGCCCAGTGCTGTACCTGCA +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGVARNA*PSAVPA
Trigger: TGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCAC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTTGGATGGCAGGGCTaGATGGGTAGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKLGWQG*MGSPGQ
Trigger: CTGCCCTGGGCTACCCATCCAGCCCTGCCATCCAAG...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTTGGATGGCAGGGCTaGATGGGTAGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTLGWQG*MGSPGQ
Trigger: CTGCCCTGGGCTACCCATCCAGCCCTGCCATCCAAG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACAGAGAGAGGCTCTATGTaGCCCCAGGTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTERGSM*PQVSAT
Trigger: GGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTC...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGTGGTCCTCATTGCTGTaGTCTGGGGCTGGATATGGT +
Preference number: 4 (lower is better)
Translates to: AAEHQGCSPCSQEAESGRWSSLL*SGAGYG
Trigger: ACCATATCCAGCCCCAGATCACAGCAATGAGGACCA...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR TCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGGGGGCCTAGATCCCTaGGCTTTGTCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLGGLDP*ALSMPF
Trigger: GAAGGGCATGGACAAAGCTCAGGGATCTAGGCCCCC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGACTTCAGCGGTGGCTaGCCCGCACCATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVDFSGG*PAPWSA
Trigger: CGCGGACCATGGTGCGGGGCAGCCACCGCTGAAGTC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACATCCTCCATCTCCCTaGCCTCTGGATCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKHPPSP*PLDPPR
Trigger: TCGAGGGGGATCCAGAGGGCAGGGAGATGGAGGATG...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGCCCAGTGCTGTACCTaGAGCCCTGACCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGAQCCT*SPDLCS
Trigger: AGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGAGGCGGGCGCTGGGCTaGGCTCGACGCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVRRALG*ARRLSR
Trigger: CCTGGAGAGGCGTCGAGCGCAGCCCAGCGCCCGCCT...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGACCCGGGTCAGAGGGTaGGAAAAGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQTRVRG*EKEAGQ
Trigger: CTGCCCTGCCTCCTTTTCCCACCCTCTGACCCGGGT...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCTCTGCAGGTGGCTTTaGGGTCAGAGGCACATCATA +
Preference number: 4 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFLCRWL*GQRHII
Trigger: TATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAG...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAAGGGTGTCCTGGTCATaGGAGGCCAAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVRVSWS*EAKAPG
Trigger: CCCTGGAGCCTTGGCCTCCCATGACCAGGACACCCT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGGCACCATCTCTTGGATaGCAGGGCTGGATGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWAPSLG*QGWMGS
Trigger: GCTACCCATCCAGCCCTGCCATCCAAGAGATGGTGC...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTTCTCTCCGCCTTCTGTaGGGAGAAGCCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTSLRLL*GEALRS
Trigger: AGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGA...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAATCTCTCCGCCTTCTGTaGGGAGAAGCCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKSLRLL*GEALRS
Trigger: AGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGA...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATTGCCCCAAGTTGCCTaGAGCCAAAGGCCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGLPQVA*SQRPPR
Trigger: TCTCGGGGGCCTTTGGCTCCAGGCAACTTGGGGCAA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCCTGCGGCGACCCCGCTaGGAGGAAGGGAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVLRRPR*EEGRAR
Trigger: TCTCGCTCTCCCTTCCTCCCAGCGGGGTCGCCGCAG...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGACACCGACGTGGCAATaGCCATGGCTTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQTPTWQ*PWLWPP
Trigger: GGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGT...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAACAAACACCAGGCGATaGGCAGCCACCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVTNTRR*AATTTL
Trigger: GAGGGTGGTGGTGGCTGCTCATCGCCTGGTGTTTGT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGCCGGTCCTGGATGCTaGCCTTCCGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELAGPGC*PSGLGQ
Trigger: CTGCCCCAGGCCGGAAGGGCAGCATCCAGGACCGGC...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGCCCAGTGCTGTACCTaGAGCCCTGACCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVAQCCT*SPDLCS
Trigger: AGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGCAATGCCTGGCCCAGTaGTGTACCTGCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQQCLAQ*CTCSPD
Trigger: GTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTG...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGCTGAGCACCAGGGCTaGTCACCATGCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLAEHQG*SPCSQE
Trigger: TTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCTGGACAGGGCCGAGCTaGGGGCGGCACCACATACAC +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVWTGPS*GRHHIH
Trigger: GTGTATGTGGTGCCGCCCCCAGCTCGGCCCTGTCCA...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTACTTCTGGCCAGAAGCTaGGCCAGGGTGTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVLLARS*ARVSWS
Trigger: TGACCAGGACACCCTGGCCCAGCTTCTGGCCAGAAG...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGGCACCATCTCTTGGATaGCAGGGCTGGATGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQAPSLG*QGWMGS
Trigger: GCTACCCATCCAGCCCTGCCATCCAAGAGATGGTGC...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCACTGCACCATCTCTTaGATGGCAGGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTHCTIS*MAGLDG
Trigger: CCCATCCAGCCCTGCCATCCAAGAGATGGTGCAGTG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGTGCCTGGCGCGTCATaGGAGCAGAGAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLVPGAS*EQRTCP
Trigger: TGGACAAGTTCTCTGCTCCCATGACGCGCCAGGCAC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGTTGCAGAACTGTGCCTaGCGCGTCATGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQLQNCA*RVMGAE
Trigger: CTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAA...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCCGGGGCGGTTGGGCTaGACGAGCGAGTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCPGRLG*TSEFRG
Trigger: GCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGG...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429593.6
CDS-3UTR CCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCCACATACACCGACGTaGCAATGGCCATGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWPHTPT*QWPWLW
Trigger: CCAAAGCCATGGCCATTGCCACGTCGGTGTATGTGG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGTCCTCTCCAGGGGGCTaGGGGGCAACCCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVSSPGG*GATRVR
Trigger: TCTGACCCGGGTTGCCCCGCAGCCCCCTGGAGAGGA...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGGTTCAGGATCCCCTGTaGAGGCCTGATCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLVQDPL*RPDPGA
Trigger: GGCCCCCGGATCAGGCCTGCACAGGGGATCCTGAAC...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGATTGCAGGGCCTGCCCTaGCAGTTCTGTTACACACTG +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGLQGLP*QFCYTL
Trigger: CAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAA...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGGGAGGAGCAGAGCTGTaGCAAAGGACCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQGGAEL*QRTFME
Trigger: CTCCATGAAGGTCCTTTGGCACAGCTCTGCTCCTCC...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCAGGGCTGCTCACCATaGTCCCAAGAAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTQGCSP*SQEAES
Trigger: TGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTATACTTGCAGAACTGTaGCTGGCGCGTCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTILAEL*LARHGS
Trigger: GCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTAT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCCATTCACAATATACTTaGAGAACTGTGCCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGHSQYT*RTVPGA
Trigger: CGCGCCAGGCACAGTTCTGCAAGTATATTGTGAATG...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCACGTGGCAATGGCCATaGCTTTGGCCTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVTWQWP*LWPPAQ
Trigger: CTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGT...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGCACCCGGAGGGCGGTaGGGGGCACATCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELAPGGR*GAHRRP
Trigger: AGGTCTACGATGTGCCCCCCACCGCCCTCCGGGTGC...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTAGTCATAGGGGCCACTaGAGGGCACCCGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELSHRGH*RAPGGR
Trigger: CCGCCCTCCGGGTGCCCTCCAGTGGCCCCTATGACT...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTACGCTCGTTTCAGGTTaGAGGGGGCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTTLVSG*RGQHRW
Trigger: CCATCTATGCTGCCCCCTCCAACCTGAAACGAGCGT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGCCCTCGTACTCATTGTaGTGTCCTGCTGGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQPSYSL*CPAGSS
Trigger: GGATGACCCAGCAGGACACCACAATGAGTACGAGGG...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGGCACCATCTCTTGGATaGCAGGGCTGGATGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQAPSLG*QGWMGS
Trigger: GCTACCCATCCAGCCCTGCCATCCAAGAGATGGTGC...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCACATACACCGACGTaGCAATGGCCATGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTPHTPT*QWPWLW
Trigger: CCAAAGCCATGGCCATTGCCACGTCGGTGTATGTGG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGATCTGGTTCCAGCTCTaGAGGTGGCTTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQIWFQL*RWLWGQ
Trigger: CTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGAT...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR GCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGCTCATTGTGGTGTCCTaGTGGGTCATCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQLIVVS*WVILHL
Trigger: GAGATGGAGGATGACCCAGCAGGACACCACAATGAG...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCTCATTGTGGTGTCCTaGTGGGTCATCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLLIVVS*WVILHL
Trigger: GAGATGGAGGATGACCCAGCAGGACACCACAATGAG...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGCCTCGGCCATCGGAATaGCCTCGTACTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQPRPSE*PRTHCG
Trigger: ACCACAATGAGTACGAGGGCATTCCGATGGCCGAGG...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCCTGAGCTTTGTCCATaGCCTTCAGGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWPELCP*PSGGHS
Trigger: ACTATGTCCACCTGAAGGGCATGGACAAAGCTCAGG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGCCCAGTGCTGTACCTaGAGCCCTGACCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVAQCCT*SPDLCS
Trigger: AGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGTGAATTGCAGGGCCTaGCCTGCCAGTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLVNCRA*PASSVT
Trigger: TGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCAC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTGGCACAATGCCCTGCTaGCCGTGTAGGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCGTMPC*PCREQR
Trigger: CCTCTGCTCCCTACACGGCCAGCAGGGCATTGTGCC...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGCTCTGCAGGTGGCTTTaGGGTCAGAGGCACATCATA +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQLCRWL*GQRHII
Trigger: TATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAG...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGAGGGTGTCCTGGTCATaGGAGGCCAAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLRVSWS*EAKAPG
Trigger: CCCTGGAGCCTTGGCCTCCCATGACCAGGACACCCT...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGCCAAAGGACCTTCATaGAGCCAGGCTAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVAKGPS*SQASEQ
Trigger: CTGCTCACTAGCCTGGCTCCATGAAGGTCCTTTGGC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCCCCAGCTGTGGCGCCTaGGTCGTGGCCTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGPSCGA*VVASAK
Trigger: CTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGG...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTAAAAGGCGCGGGGGCTaGTTAGCCTGGGTACTGGAC +
Preference number: 4 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCKRRGG*LAWVLD
Trigger: GTCCAGTACCCAGGCTAATCAGCCCCCGCGCCTTTT...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGAGAAGACACCTCTGTaGGAGGTTGAGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGEKTPL*EVEMSR
Trigger: TCTGCTCATCTCAACCTCTCACAGAGGTGTCTTCTC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCGCCGGTCCTGGATGCTaGCCTTCCGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGAGPGC*PSGLGQ
Trigger: CTGCCCCAGGCCGGAAGGGCAGCATCCAGGACCGGC...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGACCTGAGCTTTGTCCATaGCCTTCAGGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: RLLWGEALRSFREPSNSGPELCP*PSGGHS
Trigger: ACTATGTCCACCTGAAGGGCATGGACAAAGCTCAGG...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGTGAATTGCAGGGCCTaGCCTGCCAGTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVVNCRA*PASSVT
Trigger: TGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCAC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGCAGGGTTTATTAAGGTaGACACCCATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQQGLLR*TPMSEP
Trigger: GGGCTCAGACATGGGTGTGCACCTTAATAAACCCTG...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCCAGGGTTTATTAAGGTaGACACCCATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLQGLLR*TPMSEP
Trigger: GGGCTCAGACATGGGTGTGCACCTTAATAAACCCTG...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGCTGAGCACCAGGGCTaGTCACCATGCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVAEHQG*SPCSQE
Trigger: TTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGACGTGGCAATGGCCATaGCTTTGGCCTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVTWQWP*LWPPAQ
Trigger: CTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGT...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCGCTGCCCTTCCGGCCTaGGGCAGGAGAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGAALPA*GRRGHW
Trigger: CCAGTGCCCTCTCCTGCCCCAGGCCGGAAGGGCAGC...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGGGGGGCCTAGATCCCTaGGCTTTGTCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVGGLDP*ALSMPF
Trigger: GAAGGGCATGGACAAAGCTCAGGGATCTAGGCCCCC...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGGAGAAGACACCTCTGTaGGAGGTTGAGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQEKTPL*EVEMSR
Trigger: TCTGCTCATCTCAACCTCTCACAGAGGTGTCTTCTC...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTCAATGCCTGGCCCAGTaGTGTACCTGCAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELQCLAQ*CTCSPD
Trigger: GTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTG...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCTTGCAGGGCCTGCCCTaGCAGTTCTGTTACACACTG +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVLQGLP*QFCYTL
Trigger: CAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAA...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCGGACAGTTTATGTCTTaGCCGCACTCTCAGCTAACA +
Preference number: 4 (lower is better)
Translates to: SPPSVGRSPPVFPRTFKLGQFMS*PHSQLT
Trigger: TGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCC...GAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGATCCCCCTCGACCTTaGGGCCTCCATAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELDPPRP*GLHNQA
Trigger: TGCCTGGTTATGGAGGCCCCAAGGTCGAGGGGGATC...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGGATCCCCCTCGACCTTaGGGCCTCCATAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVDPPRP*GLHNQA
Trigger: TGCCTGGTTATGGAGGCCCCAAGGTCGAGGGGGATC...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGTCTCTCCGCCTTCTGTaGGGAGAAGCCCTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVSLRLL*GEALRS
Trigger: AGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGA...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGGTGCCTGGCGCGTCATaGGAGCAGAGAACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLVPGAS*EQRTCP
Trigger: TGGACAAGTTCTCTGCTCCCATGACGCGCCAGGCAC...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTLTVQC*SSRAKK
Trigger: TTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAG...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGAGGGAGAGCGAGAACTaGGACGCTTGCCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVRESEN*DACPKL
Trigger: CAACTTGGGGCAAGCGTCTCAGTTCTCGCTCTCCCT...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGCCTCCTGGTCCTCATTaGTGTGATCTGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLPPGPH*CDLGLD
Trigger: ATCCAGCCCCAGATCACAGCAATGAGGACCAGGAGG...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCACTGGACATCAGGGCTaGCACGGCTGCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGTGHQG*HGCLQG
Trigger: GCCCTGCAGGCAGCCGTGGCAGCCCTGATGTCCAGT...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCGTGAATTGCAGGGCCTaGCCTGCCAGTTCTGTTACA +
Preference number: 4 (lower is better)
Translates to: HNILAELCLARHGSRELVVNCRA*PASSVT
Trigger: TGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCAC...GACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTGGAGGAGCAGAGCTGTaGCAAAGGACCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCGGAEL*QRTFME
Trigger: CTCCATGAAGGTCCTTTGGCACAGCTCTGCTCCTCC...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTAGAGCTTCACCCTGTTaGCGGGCACAATGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELRASPC*RAQCPA
Trigger: AGCAGGGCATTGTGCCCGCCAACAGGGTGAAGCTCT...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGCACTGCACCATCTCTTaGATGGCAGGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVHCTIS*MAGLDG
Trigger: CCCATCCAGCCCTGCCATCCAAGAGATGGTGCAGTG...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGGTGCTTCATACAAATTaGGTAAGGCTGACGCTCGTT +
Preference number: 4 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQVLHTN*VRLTLV
Trigger: AACGAGCGTCAGCCTTACTCAATTTGTATGAAGCAC...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR GCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGTCCTCTCCAGGGGGCTaGGGGGCAACCCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLSSPGG*GATRVR
Trigger: TCTGACCCGGGTTGCCCCGCAGCCCCCTGGAGAGGA...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTCCTCGGCCATCGGAATaGCCTCGTACTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELPRPSE*PRTHCG
Trigger: ACCACAATGAGTACGAGGGCATTCCGATGGCCGAGG...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGCCTCGGCCATCGGAATaGCCTCGTACTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVPRPSE*PRTHCG
Trigger: ACCACAATGAGTACGAGGGCATTCCGATGGCCGAGG...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCTGCAGCCCTGACCTGTaGTCTCAGAGGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGCSPDL*SQRGRG
Trigger: GCCTCTGCCCCTCTGAGAGCACAGGTCAGGGCTGCA...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAAGTTCTGTTACACACTaGACCATCTCTTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVSSVTH*TISWMA
Trigger: TGCCATCCAAGAGATGGTGCAGTGTGTAACAGAACT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTACGCTCGTTTCAGGTTaGAGGGGGCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELTLVSG*RGQHRW
Trigger: CCATCTATGCTGCCCCCTCCAACCTGAAACGAGCGT...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCGTGGCCCGCAATGCCTaGCCCAGTGCTGTACCTGCA +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGVARNA*PSAVPA
Trigger: TGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCAC...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGACCTCTGTGAGAGGTTaGGATGAGCAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVTSVRG*DEQKGQ
Trigger: CTGCCCTTTCTGCTCATCTCAACCTCTCACAGAGGT...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGGAGAAGACACCTCTGTaGGAGGTTGAGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLEKTPL*EVEMSR
Trigger: TCTGCTCATCTCAACCTCTCACAGAGGTGTCTTCTC...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAAAGAGAACTTGTCCAGTaGATAGTTGTTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKRELVQ*IVVEER
Trigger: CCTTTCTTCAACAACTATTCACTGGACAAGTTCTCT...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCGGGCACAATGCCCTaGTGGCCGTGTAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLAGTMP*WPCREQ
Trigger: CTGCTCCCTACACGGCCAGCAGGGCATTGTGCCCGC...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCCATCCTCCATCTCCCTaGCCTCTGGATCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGHPPSP*PLDPPR
Trigger: TCGAGGGGGATCCAGAGGGCAGGGAGATGGAGGATG...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTCTCATTGTGGTGTCCTaGTGGGTCATCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: IHNILAELCLARHGSRELLIVVS*WVILHL
Trigger: GAGATGGAGGATGACCCAGCAGGACACCACAATGAG...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGTGGCGCCTGAGTCGTaGCCTCCGCCAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLVAPES*PPPRLE
Trigger: CTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCAC...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGCCTGAGCTTTGTCCATaGCCTTCAGGTGGACATAGT +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVPELCP*PSGGHS
Trigger: ACTATGTCCACCTGAAGGGCATGGACAAAGCTCAGG...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR GCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGCAGGGTTTATTAAGGTaGACACCCATGTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVQGLLR*TPMSEP
Trigger: GGGCTCAGACATGGGTGTGCACCTTAATAAACCCTG...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCTTGCAGAACTGTGCCTaGCGCGTCATGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGLQNCA*RVMGAE
Trigger: CTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAA...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
3UTR CAA 72 bp TTTCCGAGAACCTTCAAACTCTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAACAGTGCAGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FPRTFKLWTVYV*PALSANSAVLI
Trigger: GATCAGCACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAAGGTTCTCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR TCA 90 bp TCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQYTCRTVPGASWEQRTCLTVQC*SSRAKK
Trigger: TTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAG...ACAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCATCTGGTTCCAGCTCTaGAGGTGGCTTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGIWFQL*RWLWGQ
Trigger: CTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGAT...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCTCTAGCCCCCAGCTGTaGCGCCTGAGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCSSPQL*RLSRGL
Trigger: GAGGCCACGACTCAGGCGCCACAGCTGGGGGCTAGA...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCGGTGGACACAACCAGTaGCTCCCCTGGGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCGGHNQ*LPWGQG
Trigger: GCCCTGTCCCCAGGGGAGCCACTGGTTGTGTCCACC...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCAGGCTCGGTTTTGCTaGCTTCAGCGGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCQARFC*LQRWLP
Trigger: GGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTG...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCTGTTGGCGGGCACAATaGCCTGCTGGCCGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCCWRAQ*PAGRVG
Trigger: CCCTACACGGCCAGCAGGGCATTGTGCCCGCCAACA...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR TCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCACAAACACCAGGCGATaGGCAGCCACCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCTNTRR*AATTTL
Trigger: GAGGGTGGTGGTGGCTGCTCATCGCCTGGTGTTTGT...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCGGTGTTGTCATACAGTaGCCGGGCCAGCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCGVVIQ*PGQLGR
Trigger: TCGACCCAGCTGGCCCGGGCACTGTATGACAACACC...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCCAGCTGGGTCGACGTaGCAATGGCCATGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCPAGST*QWPWLW
Trigger: CCAAAGCCATGGCCATTGCCACGTCGACCCAGCTGG...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCCAAAGGACCTTCATaGAGCCAGGCTAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLAKGPS*SQASEQ
Trigger: CTGCTCACTAGCCTGGCTCCATGAAGGTCCTTTGGC...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TTCAAACTCTGGACAGTTTATGTCTTGCCCGCACTCTCAGCTAACAGTGCAGTGAGAGAACTTGTCCAGTaGATAGTTGTTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FKLWTVYVLPALSANSAVRELVQ*IVVEER
Trigger: CCTTTCTTCAACAACTATTCACTGGACAAGTTCTCT...CACTGCACTGTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCAGAGTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCCATTCACAATATACTTaGAGAACTGTGCCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGHSQYT*RTVPGA
Trigger: CGCGCCAGGCACAGTTCTGCAAGTATATTGTGAATG...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCGAGAGAGGCTCTATGTaGCCCCAGGTTTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCERGSM*PQVSAT
Trigger: GGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTC...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR GCA 90 bp TATTTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCATACTTGCAGAACTGTaGCTGGCGCGTCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: YLCIPLEQYIHNILAELCILAEL*LARHGS
Trigger: GCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTAT...GCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR TCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGTGCTTCATACAAATTaGGTAAGGCTGACGCTCGTT +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLVLHTN*VRLTLV
Trigger: AACGAGCGTCAGCCTTACTCAATTTGTATGAAGCAC...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR TCA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGCTAACAGTGCAGTGCTaGTCTTCTAGAGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LCIPLEQYIHNILAELCLLTVQC*SSRAKK
Trigger: TTTCTTGGCTCTAGAAGATCAGCACTGCACTGTTAG...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS CCA 90 bp CCGTCTCCACCCGCCGGCCGCGCTGCAGAGCGGTGCTCCCAGGGCTaGGGTCTGCGGCGACCCCGCTGGGAGGAAGGGAGAGCGAGAACT +
Preference number: 5 (lower is better)
Translates to: PSPPAGRAAERCSQG*GLRRPRWEEGRART
Trigger: AGTTCTCGCTCTCCCTTCCTCCCAGCGGGGTCGCCGCAGACCCCAGCCCTGGGAGCACCGCTCTGCAGCGCGGCCGGCGGGTGGAGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp CAGGAGAGCCTCGAGGGCTGGGAGAAGCCGCCGGGGCGGTTGGGCTaGACGAGCGAGTTTAGGGGCCAACCGTCTCCACCCGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: QESLEGWEKPPGRLG*TSEFRGQPSPPAGR
Trigger: GCGGCCGGCGGGTGGAGACGGTTGGCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAGGCTCTCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp CCGCTCAGGAGAGCCTCGAGGGCTGGGAGAAGCCGCCGGGGCGGTTaGGCTGGACGAGCGAGTTTAGGGGCCAACCGTCTCCACCCGCCG +
Preference number: 5 (lower is better)
Translates to: PLRRASRAGRSRRGG*AGRASLGANRLHPP
Trigger: CGGCGGGTGGAGACGGTTGGCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAGGCTCTCCTGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS GCA 90 bp GGCCCGCAATGCCTGGCCCAGTGCTGTACCTGCAGCCCTGACCTGTaGTCTCAGAGGGGCAGAGGCTGCCAGCCGGCCCAGGGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GPQCLAQCCTCSPDL*SQRGRGCQPAQGVP
Trigger: GGGGACACCCTGGGCCGGCTGGCAGCCTCTGCCCCTCTGAGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTGCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp CTGCGCTCGACGCCTCTCCAGGCCGCTCAGGAGAGCCTCGAGGGCTaGGAGAAGCCGCCGGGGCGGTTGGGCTGGACGAGCGAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: LRSTPLQAAQESLEG*EKPPGRLGWTSEFR
Trigger: CCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAGGCTCTCCTGAGCGGCCTGGAGAGGCGTCGAGCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS GCA 90 bp AGCCTGCCTCAGGCCAGGCTCGGTTTTGCTGACTTCAGCGGTGGCTaGCCCGCACCATGGTCCGCGGCCTCTAGCCCCCAGCTGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SLPQARLGFADFSGG*PAPWSAASSPQLWR
Trigger: GCGCCACAGCTGGGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTGAGGCAGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp GGTGGCTGCCCCGCACCATGGTCCGCGGCCTCTAGCCCCCAGCTGTaGCGCCTGAGTCGTGGCCTCCGCCAAGGTTGGAGGAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: GGCPAPWSAASSPQL*RLSRGLRQGWRRRK
Trigger: CTTTCTCCTCCTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp TTGCCCCAAGTTGCCTGGAGCCAAAGGCCCCCGAGAGCGTGGCCGTaGGGCTGGGTCGCTGGAGTGGCCGCTTCGGCCCAGACACTCGCA +
Preference number: 5 (lower is better)
Translates to: LPQVAWSQRPPRAWP*GWVAGVAASAQTLA
Trigger: TGCGAGTGTCTGGGCCGAAGCGGCCACTCCAGCGACCCAGCCCCACGGCCACGCTCTCGGGGGCCTTTGGCTCCAGGCAACTTGGGGCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS GCA 90 bp TGGGTCGACGTGGCAATGGCCATGGCTTTGGCCTCCCGCGCAGCCTaGCTCAGGCCAGGCTCGGTTTTGCTGACTTCAGCGGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: WVDVAMAMALASRAA*LRPGSVLLTSAVAA
Trigger: GGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CCA 90 bp CTCTGCAGGACCCGTAGGACATCCCCTCGGCGGAAGGACAGCTCCTaGGGGGACTCAGCGGTGTTGTCATACAGTGCCCGGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LCRTRRTSPRRKDSS*GDSAVLSYSARASW
Trigger: CCAGCTGGCCCGGGCACTGTATGACAACACCGCTGAGTCCCCCCAGGAGCTGTCCTTCCGCCGAGGGGATGTCCTACGGGTCCTGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CCA 90 bp CCCAGGGCAGCTCCCTTGACAGCCAGCACAGTGGCCCGCAATGCCTaGCCCAGTGCTGTACCTGCAGCCCTGACCTGTGCTCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PRAAPLTASTVARNA*PSAVPAALTCALRG
Trigger: CCCTCTGAGAGCACAGGTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTGCTGGCTGTCAAGGGAGCTGCCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS GCA 90 bp TACACCGACGTGGCAATGGCCATGGCTTTGGCCTCCCGCGCAGCCTaGCTCAGGCCAGGCTCGGTTTTGCTGACTTCAGCGGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: YTDVAMAMALASRAA*LRPGSVLLTSAVAA
Trigger: GGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTAAGCCGCCGGGGCGGTaGGGCTGGACGAGCGAGTTT +
Preference number: 5 (lower is better)
Translates to: PSSLRLLWGEALRSFREPKPPGR*GWTSEF
Trigger: AAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTT...AGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCAAGCCGCCGGGGCGGTaGGGCTGGACGAGCGAGTTT +
Preference number: 5 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFKPPGR*GWTSEF
Trigger: AAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTT...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp CTCATTGTGGTGTCCTGCTGGGTCATCCTCCATCTCCCTGCCCTCTaGATCCCCCTCGACCTTGGGGCCTCCATAACCAGGCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LIVVSCWVILHLPAL*IPLDLGASITRQAG
Trigger: CCCCGCCTGCCTGGTTATGGAGGCCCCAAGGTCGAGGGGGATCCAGAGGGCAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp GAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCAGACACTGGAGGTCCTGAGGTaGGACAGGGCCGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: EHQGCSPCSQEAESGRQTLEVLR*DRAELG
Trigger: CCCCAGCTCGGCCCTGTCCAACCTCAGGACCTCCAG...TGTCTGCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGACGCTTGCCCCAAGTaGCCTGGAGCCAAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFDACPK*PGAKGP
Trigger: GGGGCCTTTGGCTCCAGGCAACTTGGGGCAAGCGTC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CAA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCGAGCAGGGTAGTGAATaGCAGGGCCTGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFEQGSE*QGLPCQ
Trigger: CTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTC...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp GCTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGGAGCAGGGTAGTGAATaGCAGGGCCTGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AAEHQGCSPCSQEAESGREQGSE*QGLPCQ
Trigger: CTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTC...CCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS GCA 90 bp CCCCGGCTCCCGGCCTCCTTCCCACTCCAGATCTGGTTCCAGCTCTaGAGGTGGCTTTGGGGTCAGAGGCACATCATAGGGAGCATCATC +
Preference number: 5 (lower is better)
Translates to: PRLPASFPLQIWFQL*RWLWGQRHIIGSII
Trigger: GATGATGCTCCCTATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGATCTGGAGTGGGAAGGAGGCCGGGAGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CAA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTAMAMA*ASRAAC
Trigger: GCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGC...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp AGTGACCTCCACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SDLHPRLRREGSSSSLPQAMAMA*ASRAAC
Trigger: GCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGC...CTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTGGAGGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTGGAGGTCCTGAGGTaGGACAGGGCCGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSPPSVGRSPPVFPRTFKLEVLR*DRAELG
Trigger: CCCCAGCTCGGCCCTGTCCAACCTCAGGACCTCCAG...TTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 90 bp CTTTGGCAGGCAGGGGAGGAGCAGAGCTGTGCCAAAGGACCTTCATaGAGCCAGGCTAGTGAGCAGGGTAGTGAATTGCAGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LWQAGEEQSCAKGPS*SQASEQGSELQGLP
Trigger: GGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGCTCCATGAAGGTCCTTTGGCACAGCTCTGCTCCTCCCCTGCCTGCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGGCCAGGCTCGGTTTaGCTGACTTCAGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWRPGSV*LTSAVA
Trigger: AGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCT...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAAGAGCTTCACCCTGTaGGCGGGCACAATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWKSFTL*AGTMPC
Trigger: GCAGGGCATTGTGCCCGCCAACAGGGTGAAGCTCTT...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CAA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGCCACCACCACCCTCTaGCTGTGGGGCACGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RLLWGEALRSFREPSNSGATTTL*LWGTKR
Trigger: CCTTTTCGTGCCCCACAGCAAGAGGGTGGTGGTGGC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGAGCAGGGTAGTGAATaGCAGGGCCTGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RLLWGEALRSFREPSNSGEQGSE*QGLPCQ
Trigger: CTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGCGAGAACTGAGACGCTaGCCCCAAGTTGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWRELRR*PQVAWS
Trigger: GCTCCAGGCAACTTGGGGCAAGCGTCTCAGTTCTCG...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS-3UTR CAA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTAGGCCAGGCTCGGTTTaGCTGACTTCAGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTRPGSV*LTSAVA
Trigger: AGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGCCACCACCACCCTCTaGCTGTGGGGCACGAAAAGG +
Preference number: 5 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVATTTL*LWGTKR
Trigger: CCTTTTCGTGCCCCACAGCAAGAGGGTGGTGGTGGC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS TCA 90 bp CGCCCTCCCCGTCTGCCAGCAGTTCCTCGGGTGCTTCATACAAATTaGGTAAGGCTGACGCTCGTTTCAGGTTGGAGGGGGCAGCATAGA +
Preference number: 5 (lower is better)
Translates to: RPPRLPAVPRVLHTN*VRLTLVSGWRGQHR
Trigger: TCTATGCTGCCCCCTCCAACCTGAAACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACCCGAGGAACTGCTGGCAGACGGGGAGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CAA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAAGGCCAGGCTCGGTTTaGCTGACTTCAGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVRPGSV*LTSAVA
Trigger: AGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCT...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CACCCTAGGCTGAGGAGAGAAGGATCTAGTTCCTCACTGCCCCAGAGCCTAGTAGCTCTGCAGGTGGCTTaGGGGTCAGAGGCACATCAT +
Preference number: 5 (lower is better)
Translates to: HPRLRREGSSSSLPQSLVALQVA*GSEAHH
Trigger: ATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGC...TACTAGGCTCTGGGGCAGTGAGGAACTAGATCCTTCTCTCCTCAGCCTAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CAA 90 bp CTGCTGAGCACCAGGGCTGCTCACCATGCTCCCAAGAAGCAGAGTCAGGGAGGCGGTGCTTCATACAAATaGAGTAAGGCTGACGCTCGT +
Preference number: 5 (lower is better)
Translates to: LLSTRAAHHAPKKQSQGGGASYK*SKADAR
Trigger: ACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACC...GCCTCCCTGACTCTGCTTCTTGGGAGCATGGTGAGCAGCCCTGGTGCTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CAA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTATGCCCTCGTACTCATaGTGGTGTCCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTMPSYS*WCPAGS
Trigger: TGACCCAGCAGGACACCACAATGAGTACGAGGGCAT...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp TGTCTGAGCCCCAGCTCTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCACATTCACAATATACTaGCAGAACTGTGCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: CLSPSSLRLLWGEALRSFTFTIY*QNCAWR
Trigger: GCGCCAGGCACAGTTCTGCAAGTATATTGTGAATGT...GAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAGAGCTGGGGCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTTGGCCTCCGCCAAGGTaGGAGGAGGAGAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTWPPPR*EEEKEN
Trigger: GTTTTCTTTCTCCTCCTCCAACCTTGGCGGAGGCCA...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS GCA 90 bp CCATGCCCTTCAGGTGGACATAGTCATACTCCTCGGCCATCGGAATaGCCTCGTACTCATTGTGGTGTCCTGCTGGGTCATCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: PCPSGGHSHTPRPSE*PRTHCGVLLGHPPS
Trigger: AGATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCCGAGGAGTATGACTATGTCCACCTGAAGGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS GCA 90 bp CTTCATGGAGCCAGGCTAGTGAGCAGGGTAGTGAATTGCAGGGCCTaGCCTGCCAGTTCTGTTACACACTGCACCATCTCTTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LHGARLVSRVVNCRA*PASSVTHCTISWMA
Trigger: TGCCATCCAAGAGATGGTGCAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGCTCCATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp AGAGAGAGGCTCTATGTGGCCCCAGGTTTCTGCCACCTGACTTTTCACAGCCAGATGCCCTCGTACTCATaGTGGTGTCCTGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: RERLYVAPGFCHLTFHSQMPSYS*WCPAGS
Trigger: TGACCCAGCAGGACACCACAATGAGTACGAGGGCAT...CTGGCTGTGAAAAGTCAGGTGGCAGAAACCTGGGGCCACATAGAGCCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGGCCACCACCACCCTCTaGCTGTGGGGCACGAAAAGG +
Preference number: 5 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLATTTL*LWGTKR
Trigger: CCTTTTCGTGCCCCACAGCAAGAGGGTGGTGGTGGC...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp CCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: PPSVGRSPPVFPRTFKLWWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...CCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CTCTCCGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: LSAFCGEKPSGLSENLQTWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...AGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS-3UTR CAA 90 bp CGCCTTCTGTGGGGAGAAGCCCTCCGGTCTTTCCGAGAACCTTCAAACTCTGGAGGTGCTTCATACAAATaGAGTAAGGCTGACGCTCGT +
Preference number: 5 (lower is better)
Translates to: RLLWGEALRSFREPSNSGGASYK*SKADAR
Trigger: ACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACC...TCCAGAGTTTGAAGGTTCTCGGAAAGACCGGAGGGCTTCTCCCCACAGAAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS-3UTR CAA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCGGGGACTCAGCGGTGTaGTCATACAGTGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGGDSAV*SYSARA
Trigger: GGCCCGGGCACTGTATGACAACACCGCTGAGTCCCC...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS-3UTR CAA 90 bp TTGTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGCTGGAGGTCCTGAGGTaGGACAGGGCCGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCIPLEQYIHNILAELCLLEVLR*DRAELG
Trigger: CCCCAGCTCGGCCCTGTCCAACCTCAGGACCTCCAG...CAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp TTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTGTGGACAGTTTATGTCTaGCCCGCACTCTCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: FTIYLQNCAWRVMGAENLWTVYV*PALSAN
Trigger: GTTAGCTGAGAGTGCGGGCAAGACATAAACTGTCCA...CAAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp ATTCACAATATACTTGCAGAACTGTGCCTGGCGCGTCATGGGAGCAGAGAACTTACATTCACAATATACTaGCAGAACTGTGCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: IHNILAELCLARHGSRELTFTIY*QNCAWR
Trigger: GCGCCAGGCACAGTTCTGCAAGTATATTGTGAATGT...AAGTTCTCTGCTCCCATGACGCGCCAGGCACAGTTCTGCAAGTATATTGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000429593.6
CDS-3UTR CAA 90 bp GTGTATCCCACTAGAACAATACATTCACAATATACTTGCAGAACTGTGCCTGGCTGGCCTCCGCCAAGGTaGGAGGAGGAGAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: VYPTRTIHSQYTCRTVPGWPPPR*EEEKEN
Trigger: GTTTTCTTTCTCCTCCTCCAACCTTGGCGGAGGCCA...GCCAGGCACAGTTCTGCAAGTATATTGTGAATGTATTGTTCTAGTGGGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429593.6
CDS CCA 72 bp AAGGCCCCCGAGAGCGTGGCCGTGGGGCTGGGTCGCTaGAGTGGCCGCTTCGGCCCAGACACTCGCACCCCC +
Preference number: 6 (lower is better)
Translates to: KAPESVAVGLGR*SGRFGPDTRTP
Trigger: GGGGGTGCGAGTGTCTGGGCCGAAGCGGCCACTCCAGCGACCCAGCCCCACGGCCACGCTCTCGGGGGCCTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS GCA 72 bp TGGCCGCTTCGGCCCAGACACTCGCACCCCCGGCGGTaGGGCGGTTTTCACGCGCGCACTCACTCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: WPLRPRHSHPRR*GGFHARTHSAR
Trigger: GCGCGCTGAGTGAGTGCGCGCGTGAAAACCGCCGCACCGCCGGGGGTGCGAGTGTCTGGGCCGAAGCGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS CAA 90 bp GCCGCTCAGGAGAGCCTCGAGGGCTGGGAGAAGCCGCCGGGGCGGTaGGGCTGGACGAGCGAGTTTAGGGGCCAACCGTCTCCACCCGCC +
Preference number: 6 (lower is better)
Translates to: AAQESLEGWEKPPGR*GWTSEFRGQPSPPA
Trigger: GGCGGGTGGAGACGGTTGGCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAGGCTCTCCTGAGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp CCCGCACCATGGTCCGCGGCCTCTAGCCCCCAGCTGTaGCGCCTGAGTCGTGGCCTCCGCCAAGGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: PAPWSAASSPQL*RLSRGLRQGWR
Trigger: CCTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGGGGCTAGAGGCCGCGGACCATGGTGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp GTGCCCGGGCCAGCTGGGTCGACGTGGCAATGGCCATaGCTTTGGCCTCCCGCGCAGCCTGCCTCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VPGPAGSTWQWP*LWPPAQPASGQ
Trigger: CTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGACCCAGCTGGCCCGGGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CCA 72 bp TGGAGCCAAAGGCCCCCGAGAGCGTGGCCGTGGGGCTaGGTCGCTGGAGTGGCCGCTTCGGCCCAGACACTC +
Preference number: 6 (lower is better)
Translates to: WSQRPPRAWPWG*VAGVAASAQTL
Trigger: GAGTGTCTGGGCCGAAGCGGCCACTCCAGCGACCCAGCCCCACGGCCACGCTCTCGGGGGCCTTTGGCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS CAA 72 bp CGGGCCAGCTGGGTCGACGTGGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGCCTCAGGCCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: RASWVDVAMAMA*ASRAACLRPGS
Trigger: CGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGACCCAGCTGGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS TCA 72 bp CCCGCGCAGCCTGCCTCAGGCCAGGCTCGGTTTTGCTaGCTTCAGCGGTGGCTGCCCCGCACCATGGTCCGC +
Preference number: 6 (lower is better)
Translates to: PAQPASGQARFC*LQRWLPRTMVR
Trigger: GCGGACCATGGTGCGGGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp CTCGAGGGCTGGGAGAAGCCGCCGGGGCGGTTGGGCTaGACGAGCGAGTTTAGGGGCCAACCGTCTCCACCC +
Preference number: 6 (lower is better)
Translates to: LEGWEKPPGRLG*TSEFRGQPSPP
Trigger: GGGTGGAGACGGTTGGCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS GCA 72 bp CAGGCCAGGCTCGGTTTTGCTGACTTCAGCGGTGGCTaGCCCGCACCATGGTCCGCGGCCTCTAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: QARLGFADFSGG*PAPWSAASSPQ
Trigger: CTGGGGGCTAGAGGCCGCGGACCATGGTGCGGGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp AGAGCCTCGAGGGCTGGGAGAAGCCGCCGGGGCGGTTaGGCTGGACGAGCGAGTTTAGGGGCCAACCGTCTC +
Preference number: 6 (lower is better)
Translates to: RASRAGRSRRGG*AGRASLGANRL
Trigger: GAGACGGTTGGCCCCTAAACTCGCTCGTCCAGCCCAACCGCCCCGGCGGCTTCTCCCAGCCCTCGAGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp GGGGCGGCACCACATACACCGACGTGGCAATGGCCATaGCTTTGGCCTCCCGCGCAGCCTGCCTCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GAAPHTPTWQWP*LWPPAQPASGQ
Trigger: CTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGTATGTGGTGCCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS CAA 72 bp GCCTCCCGCGCAGCCTGCCTCAGGCCAGGCTCGGTTTaGCTGACTTCAGCGGTGGCTGCCCCGCACCATGGT +
Preference number: 6 (lower is better)
Translates to: ASRAACLRPGSV*LTSAVAAPHHG
Trigger: ACCATGGTGCGGGGCAGCCACCGCTGAAGTCAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CAA 90 bp TACAGTGCCCGGGCCAGCTGGGTCGACGTGGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGCCTCAGGCCAGGCTCGGTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: YSARASWVDVAMAMA*ASRAACLRPGSVLL
Trigger: CAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGACCCAGCTGGCCCGGGCACTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CAA 90 bp GCTGGGGGCGGCACCACATACACCGACGTGGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGCCTCAGGCCAGGCTCGGTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: AGGGTTYTDVAMAMA*ASRAACLRPGSVLL
Trigger: CAGCAAAACCGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGTATGTGGTGCCGCCCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS TCA 72 bp CATGGTCCGCGGCCTCTAGCCCCCAGCTGTGGCGCCTaGGTCGTGGCCTCCGCCAAGGTTGGAGGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: HGPRPLAPSCGA*VVASAKVGGGE
Trigger: TTCTCCTCCTCCAACCTTGGCGGAGGCCACGACTCAGGCGCCACAGCTGGGGGCTAGAGGCCGCGGACCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS GCA 72 bp AGGCACCAGCCGTCCAGTCCACCAGCGCCCTCTCTCTaGAGGACCCGTAGGACATCCCCTCGGCGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: RHQPSSPPAPSL*RTRRTSPRRKD
Trigger: GTCCTTCCGCCGAGGGGATGTCCTACGGGTCCTGCAGAGAGAGGGCGCTGGTGGACTGGACGGCTGGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CAA 72 bp GGCACCACATACACCGACGTGGCAATGGCCATGGCTTaGGCCTCCCGCGCAGCCTGCCTCAGGCCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: GTTYTDVAMAMA*ASRAACLRPGS
Trigger: CGAGCCTGGCCTGAGGCAGGCTGCGCGGGAGGCCAAAGCCATGGCCATTGCCACGTCGGTGTATGTGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351354.3
ENST00000429593.6
CDS TCA 72 bp GCGGCGACCCCGCTGGGAGGAAGGGAGAGCGAGAACTaGGACGCTTGCCCCAAGTTGCCTGGAGCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: AATPLGGRESEN*DACPKLPGAKG
Trigger: GCCTTTGGCTCCAGGCAACTTGGGGCAAGCGTCTCAGTTCTCGCTCTCCCTTCCTCCCAGCGGGGTCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS GCA 72 bp GGCAGCTCCCTTGACAGCCAGCACAGTGGCCCGCAATaGCTGGCCCAGTGCTGTACCTGCAGCCCTGACCTG +
Preference number: 6 (lower is better)
Translates to: GSSLDSQHSGPQ*LAQCCTCSPDL
Trigger: CAGGTCAGGGCTGCAGGTACAGCACTGGGCCAGGCATTGCGGGCCACTGTGCTGGCTGTCAAGGGAGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp AGTCATAGGGGCCACTGGAGGGCACCCGGAGGGCGGTaGGGGGCACATCGTAGACCTCCAAGGCATCTCTGG +
Preference number: 6 (lower is better)
Translates to: SHRGHWRAPGGR*GAHRRPPRHLW
Trigger: CCAGAGATGCCTTGGAGGTCTACGATGTGCCCCCCACCGCCCTCCGGGTGCCCTCCAGTGGCCCCTATGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS GCA 72 bp CAGCAGGCAAGAGCTTCACCCTGTTGGCGGGCACAATaGCCTGCTGGCCGTGTAGGGAGCAGAGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: QQARASPCWRAQ*PAGRVGSRGTS
Trigger: GCTGGTGCCTCTGCTCCCTACACGGCCAGCAGGGCATTGTGCCCGCCAACAGGGTGAAGCTCTTGCCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS GCA 72 bp GAAGGGAGAGCGAGAACTGAGACGCTTGCCCCAAGTTaGCTGGAGCCAAAGGCCCCCGAGAGCGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: EGRARTETLAPS*LEPKAPESVAV
Trigger: CACGGCCACGCTCTCGGGGGCCTTTGGCTCCAGGCAACTTGGGGCAAGCGTCTCAGTTCTCGCTCTCCCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS CCA 72 bp ACCCGTAGGACATCCCCTCGGCGGAAGGACAGCTCCTaGGGGGACTCAGCGGTGTTGTCATACAGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: TRRTSPRRKDSS*GDSAVLSYSAR
Trigger: CCGGGCACTGTATGACAACACCGCTGAGTCCCCCCAGGAGCTGTCCTTCCGCCGAGGGGATGTCCTACGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS CAA 72 bp CCCGCTGGGAGGAAGGGAGAGCGAGAACTGAGACGCTaGCCCCAAGTTGCCTGGAGCCAAAGGCCCCCGAGA +
Preference number: 6 (lower is better)
Translates to: PAGRKGERELRR*PQVAWSQRPPR
Trigger: TCTCGGGGGCCTTTGGCTCCAGGCAACTTGGGGCAAGCGTCTCAGTTCTCGCTCTCCCTTCCTCCCAGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351354.3
CDS GCA 72 bp CTGGGGGCGGCACCACATACACCTCCTGGTCCTCATTaGTGTGATCTGGGGCTGGATATGGTGAGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LGAAPHTPPGPH*CDLGLDMVSQA
Trigger: AGCCTGGCTCACCATATCCAGCCCCAGATCACAGCAATGAGGACCAGGAGGTGTATGTGGTGCCGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216733.8
CDS GCA 72 bp CCGGCCTCCTTCCCACTCCAGATCTGGTTCCAGCTCTaGAGGTGGCTTTGGGGTCAGAGGCACATCATAGGG +
Preference number: 6 (lower is better)
Translates to: PASFPLQIWFQL*RWLWGQRHIIG
Trigger: CCCTATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGATCTGGAGTGGGAAGGAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS CAA 90 bp GGCCTCCTTCCCACTCCAGATCTGGTTCCAGCTCTGCAGGTGGCTTaGGGGTCAGAGGCACATCATAGGGAGCATCATCCTCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GLLPTPDLVPALQVA*GSEAHHREHHPLQG
Trigger: CCCCTGGAGAGGATGATGCTCCCTATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGATCTGGAGTGGGAAGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS GCA 72 bp GGCCATCGGAATGCCCTCGTACTCATTGTGGTGTCCTaGTGGGTCATCCTCCATCTCCCTGCCCTCTGGATC +
Preference number: 6 (lower is better)
Translates to: GHRNALVLIVVS*WVILHLPALWI
Trigger: GATCCAGAGGGCAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp CATCGGAATGCCCTCGTACTCATTGTGGTGTCCTGCTaGGTCATCCTCCATCTCCCTGCCCTCTGGATCCCC +
Preference number: 6 (lower is better)
Translates to: HRNALVLIVVSC*VILHLPALWIP
Trigger: GGGGATCCAGAGGGCAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp TACTCCTCGGCCATCGGAATGCCCTCGTACTCATTGTaGTGTCCTGCTGGGTCATCCTCCATCTCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: YSSAIGMPSYSL*CPAGSSSISLP
Trigger: GGGCAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCCGAGGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CCA 72 bp GCAGGGGAGGAGCAGAGCTGTGCCAAAGGACCTTCATaGAGCCAGGCTAGTGAGCAGGGTAGTGAATTGCAG +
Preference number: 6 (lower is better)
Translates to: AGEEQSCAKGPS*SQASEQGSELQ
Trigger: CTGCAATTCACTACCCTGCTCACTAGCCTGGCTCCATGAAGGTCCTTTGGCACAGCTCTGCTCCTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CAA 90 bp GCCAAAGGACCTTCATGGAGCCAGGCTAGTGAGCAGGGTAGTGAATaGCAGGGCCTGCCCTGCCAGTTCTGTTACACACTGCACCATCTC +
Preference number: 6 (lower is better)
Translates to: AKGPSWSQASEQGSE*QGLPCQFCYTLHHL
Trigger: GAGATGGTGCAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGCTCCATGAAGGTCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS GCA 72 bp GCCAGGCTAGTGAGCAGGGTAGTGAATTGCAGGGCCTaGCCTGCCAGTTCTGTTACACACTGCACCATCTCT +
Preference number: 6 (lower is better)
Translates to: ARLVSRVVNCRA*PASSVTHCTIS
Trigger: AGAGATGGTGCAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CAA 72 bp CCCACTCCAGATCTGGTTCCAGCTCTGCAGGTGGCTTaGGGGTCAGAGGCACATCATAGGGAGCATCATCCT +
Preference number: 6 (lower is better)
Translates to: PTPDLVPALQVA*GSEAHHREHHP
Trigger: AGGATGATGCTCCCTATGATGTGCCTCTGACCCCAAAGCCACCTGCAGAGCTGGAACCAGATCTGGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS CAA 72 bp TCATACTCCTCGGCCATCGGAATGCCCTCGTACTCATaGTGGTGTCCTGCTGGGTCATCCTCCATCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SYSSAIGMPSYS*WCPAGSSSISL
Trigger: CAGGGAGATGGAGGATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCCGAGGAGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS CAA 72 bp CCTTCATGGAGCCAGGCTAGTGAGCAGGGTAGTGAATaGCAGGGCCTGCCCTGCCAGTTCTGTTACACACTG +
Preference number: 6 (lower is better)
Translates to: PSWSQASEQGSE*QGLPCQFCYTL
Trigger: CAGTGTGTAACAGAACTGGCAGGGCAGGCCCTGCAATTCACTACCCTGCTCACTAGCCTGGCTCCATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6
CDS TCA 72 bp CGTCTGCCAGCAGTTCCTCGGGTGCTTCATACAAATTaGGTAAGGCTGACGCTCGTTTCAGGTTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: RLPAVPRVLHTN*VRLTLVSGWRG
Trigger: CCCCCTCCAACCTGAAACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACCCGAGGAACTGCTGGCAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS CAA 72 bp CCGTCTGCCAGCAGTTCCTCGGGTGCTTCATACAAATaGAGTAAGGCTGACGCTCGTTTCAGGTTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PSASSSSGASYK*SKADARFRLEG
Trigger: CCCCTCCAACCTGAAACGAGCGTCAGCCTTACTCAATTTGTATGAAGCACCCGAGGAACTGCTGGCAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216733.8
ENST00000351354.3
CDS GCA 72 bp TCAGGTGGACATAGTCATACTCCTCGGCCATCGGAATaGCCTCGTACTCATTGTGGTGTCCTGCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: SGGHSHTPRPSE*PRTHCGVLLGH
Trigger: ATGACCCAGCAGGACACCACAATGAGTACGAGGGCATTCCGATGGCCGAGGAGTATGACTATGTCCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216733.8
ENST00000351354.3
ENST00000429593.6