RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EEPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122547

Ensembl transcript IDs: ENST00000242108.9, ENST00000444777.1, ENST00000468591.1, ENST00000487069.5, ENST00000534978.1

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: QERHSLVVRNECFWR*WTVARSLSTPSSPP
Trigger: GGGAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 90 bp AAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTaGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTG +
Preference number: 1 (lower is better)
Translates to: KGSSALKRHPTGLIP*LCPPGSQGGHMDLV
Trigger: CACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 90 bp GCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTCTaGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: AQQERHSLVVRNECF*RCWTVARSLSTPSS
Trigger: AGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 90 bp CTCAAGGCTCAGACATCCCATTTCGATGCTTCCAGAAGCACAGCCTaGACCCAGGGACAGGAGCTGCCGCCCTCCCACTGGAGAGACCTC +
Preference number: 1 (lower is better)
Translates to: LKAQTSHFDASRSTA*TQGQELPPSHWRDL
Trigger: GAGGTCTCTCCAGTGGGAGGGCGGCAGCTCCTGTCCCTGGGTTCAGGCTGTGCTTCTGGAAGCATCGAAATGGGATGTCTGAGCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 90 bp CTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTCCCTCTaGTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGC +
Preference number: 1 (lower is better)
Translates to: LDCGPQPEHPFFSSL*SYCLCAAIQSAADS
Trigger: GCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 90 bp CATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTGCTCAGGTCTGTaGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTG +
Preference number: 1 (lower is better)
Translates to: HPVSSGQPAQCCSGL*HPEIKGVSAPRRFL
Trigger: CAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCCGCTGCTGACTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 90 bp GAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTCTGGCGCTGCTaGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: ERHSLVVRNECFWRC*TVARSLSTPSSPPS
Trigger: AGAGGGAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR GCA 90 bp TCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTaGTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCC +
Preference number: 1 (lower is better)
Translates to: SLCCHPVSSGQPAQC*SGLWHPEIKGVSAP
Trigger: GGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 90 bp TCAGAAATGAGTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTaGGCACCCCTTCTTCTCCTCCCTCTGCTCATATTGTCTTTGTGC +
Preference number: 1 (lower is better)
Translates to: SEMSASGAAGLWPAA*APLLLLPLLILSLC
Trigger: GCACAAAGACAATATGAGCAGAGGGAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 90 bp GGAGCTGCCGCCCTCCCACTGGAGAGACCTCAGAATGGACACAATTaGTTCCCAAGTACCCTTAGAGCTCCTGGAAGAGGGTTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: GAAALPLERPQNGHN*FPSTLRAPGRGFPS
Trigger: GGAAGGGAACCCTCTTCCAGGAGCTCTAAGGGTACTTGGGAATCAATTGTGTCCATTCTGAGGTCTCTCCAGTGGGAGGGCGGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 90 bp TTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCT +
Preference number: 1 (lower is better)
Translates to: LSLCCHPVSSGQPAQ*CSGLWHPEIKGVSA
Trigger: AGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 90 bp TTGGGACATCCGGCTGGTGAATGTAGGGGAGGTTTCACCTTTAGATaGGGCACCAGAAACGATGTGCTCCCTGGTAGCATCCTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: LGHPAGECRGGFTFR*GTRNDVLPGSILSC
Trigger: GCAGCTCAGGATGCTACCAGGGAGCACATCGTTTCTGGTGCCTCATCTAAAGGTGAAACCTCCCCTACATTCACCAGCCGGATGTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 90 bp CACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAA +
Preference number: 1 (lower is better)
Translates to: HATPTGGPEWSTEKA*GKASSADALRIKIK
Trigger: TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 90 bp CCTTTAGATGAGGCACCAGAAACGATGTGCTCCCTGGTAGCATCCTaGGCTGCCCCTCTTGACTTTAATGCTAACCCTGCTGCTTTTCCT +
Preference number: 1 (lower is better)
Translates to: PLDEAPETMCSLVAS*AAPLDFNANPAAFP
Trigger: AGGAAAAGCAGCAGGGTTAGCATTAAAGTCAAGAGGGGCAGCTCAGGATGCTACCAGGGAGCACATCGTTTCTGGTGCCTCATCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 90 bp CAGCCTCTGGCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTaGATTTCCTGTCCCCTCAGCTCACTTAAGGAGGCTTTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: QPLAQARLRTQRSSD*ISCPLSSLKEAFLS
Trigger: GGACAGAAAAGCCTCCTTAAGTGAGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGCCAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGAAGGCAGCTCTGCCCTaGAGCGTCACCCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: SALPTWWGTRLARHPHWRKAALP*SVTPQG
Trigger: GCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTT...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGA +
Preference number: 2 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSGGVRA*HATPTG
Trigger: TCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACC...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR TCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGGAGCTGATGGGGCCTTaGGAGGCGCCTCTGCAAGGC +
Preference number: 2 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWELMGP*EAPLQG
Trigger: GCCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTC...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSSTEKA*GKASSA
Trigger: AGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGA...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR GCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADECFWR*WTVARS
Trigger: GCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTC...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 90 bp CAGATCTCCCTGGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTaGGGCTCGGGGATGCAGATGCCTAGTGGCAGGCACGCATCCTCG +
Preference number: 2 (lower is better)
Translates to: QISLGWCCLREIPPG*GSGMQMPSGRHASS
Trigger: CGAGGATGCGTGCCTGCCACTAGGCATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCCAGGGAGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAACCCCACTGGAGGTCCTaGATGGTCCACAGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKPHWRS*MVHREG
Trigger: GCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGG...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CCA 90 bp CCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGAGAAAAGGCGGGGGAGGGCTGTaGCGGACTTGTCCCATGCTC +
Preference number: 2 (lower is better)
Translates to: PAMLLGARWPQKDGLWRKGGGGL*RTCPML
Trigger: GAGCATGGGACAAGTCCGCCACAGCCCTCCCCCGCC...TTTTCTCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGT +
Preference number: 2 (lower is better)
Translates to: KRQLCPEASPHRAHS*AVPSWVPGWTHGFG
Trigger: ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR GCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTLIPWL*PPGSQG
Trigger: ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAG...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAAATCCCTCCTGGCTTaGGCTCGGGGATGCAGATGC +
Preference number: 2 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKKSLLA*ARGCRC
Trigger: GCATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTT...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGGAGGGACACTCTCCATaGTACCCCGAGGTCAACTTC +
Preference number: 2 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWEGHSP*YPEVNF
Trigger: GAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTC...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR GCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCTCCCCGCAGGTTTCTaGTTTGCCCACCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: TASPMLLRSVASRDKRRLLPAGF*FAHLVG
Trigger: CCCCACCAGGTGGGCAAAGCAGAAACCTGCGGGGAG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR GCA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTGCTTGGGCTCGGGGATaGAGATGCCTAGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPAWARG*RCLVAG
Trigger: GCCTGCCACTAGGCATCTGCATCCCCGAGCCCAAGC...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCTTGGCTGTGCCCTCCTaGGTCCCAGGGTGGACACAT +
Preference number: 2 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPLAVPS*VPGWTH
Trigger: ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAA...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTSTEKA*GKASSA
Trigger: AGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGA...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGA +
Preference number: 2 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAGGVRA*HATPTG
Trigger: TCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACC...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR GCA 90 bp CACAACCAACTGTCCCTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: HNQLSLPPATRRDTLHDTLIPWL*PPGSQG
Trigger: ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAG...GGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAGGGACAGTTGGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR GCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCAGGTTTCTGCTTTaGCCACCTGGTGGGGTACGC +
Preference number: 2 (lower is better)
Translates to: TASPMLLRSVASRDKRRLRRFLL*PPGGVR
Trigger: GCGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGTTGGCTGTGCCCTCCTaGGTCCCAGGGTGGACACAT +
Preference number: 2 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMLAVPS*VPGWTH
Trigger: ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAA...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp AGCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGTCTGCTTTGCCCACCTaGTGGGGTACGCGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: SLSVFSCETQIVADLPGMSALPT*WGTRLA
Trigger: TGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA...CATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR GCA 90 bp CACAACCAACTGTCCCTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCAT +
Preference number: 2 (lower is better)
Translates to: HNQLSLPPATRRDTLHDTGQPAQ*CSGLWH
Trigger: ATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCC...GGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAGGGACAGTTGGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGACTGTGGCCCGCAGCCTaGGCACCCCTTCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRLWPAA*APLLLL
Trigger: GAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAG...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR TCA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAGGACAGGAGGGTTCTTaGTACTGGTCCACATTTAGT +
Preference number: 2 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKGQEGS*YWSTFS
Trigger: ACTAAATGTGGACCAGTATCAAGAACCCTCCTGTCC...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR GCA 90 bp CCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGAGAAAACCACACAGAGGCACCTaGCGTGGTGCAAATACACAC +
Preference number: 2 (lower is better)
Translates to: PAMLLGARWPQKDGLWRKPHRGT*RGANTH
Trigger: GTGTGTATTTGCACCACGGCAGGTGCCTCTGTGTGG...TTTTCTCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTCCCCACTGGAGGTCCTaGATGGTCCACAGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAPHWRS*MVHREG
Trigger: GCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGG...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAAAGGGAAATCCCTCCTaGCTTGGGCTCGGGGATGCA +
Preference number: 2 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLKGNPS*LGLGDA
Trigger: TGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTT...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR TCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCCAAGGCCTCAAGTGCTaGTGCTCTGAGAATAAAAAT +
Preference number: 2 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTQGLKC*CSENKN
Trigger: ATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTG...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTACTGGAGGTCCTGAATaGTCCACAGAGAAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSATGGPE*STEKAW
Trigger: CCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGT...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR TCA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCAAGGCCTCAAGTGCTaGTGCTCTGAGAATAAAAAT +
Preference number: 2 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCQGLKC*CSENKN
Trigger: ATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTG...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR GCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCGGCGGACTTGTCCCATaGTCTCACTGCAGCGAGGCA +
Preference number: 2 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFGGLVP*SHCSEA
Trigger: TGCCTCGCTGCAGTGAGAGCATGGGACAAGTCCGCC...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCCCTCTATTTACCCAGTaGTGTGACCTTGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: AQARLRTQRSSDWISCPLPLFTQ*CDLEEV
Trigger: GACCTCCTCAAGGTCACACCACTGGGTAAATAGAGG...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR GCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCATATTGTCTTTGTGCTaGCATCCAGTCAGCAGCGGA +
Preference number: 2 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFILSLC*HPVSSG
Trigger: TCCGCTGCTGACTGGATGGCAGCACAAAGACAATAT...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCGCTTCCATGGGATACTaGAATAATCTAGGTAATCTA +
Preference number: 2 (lower is better)
Translates to: AQARLRTQRSSDWISCPLASMGY*NNLGNL
Trigger: TAGATTACCTAGATTATTCCAGTATCCCATGGAAGC...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 72 bp CTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCTGGTaGGGTACGCGCCTGGCACGCCACCCCCACTGGAGG +
Preference number: 3 (lower is better)
Translates to: LRSPQVSALPTW*GTRLARHPHWR
Trigger: CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CAA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLHRAHS*AVPSWV
Trigger: GACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTG...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 72 bp AGGCTTCACAGAGGTCCCGGCGAGCTGATGGGGCCTTaGGAGGCGCCTCTGCAAGGCCTCAAGGTGGGGACA +
Preference number: 3 (lower is better)
Translates to: RLHRGPGELMGP*EAPLQGLKVGT
Trigger: TGTCCCCACCTTGAGGCCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTCGCCGGGACCTCTGTGAAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 72 bp GGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATaGCTAGTGGCAGGCACGCATCCTCGCTTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: GKSLLAWARGCR*LVAGTHPRFLP
Trigger: GGGGAGGAAGCGAGGATGCGTGCCTGCCACTAGGCATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 72 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGAGGTCCTGAATGGTCC +
Preference number: 3 (lower is better)
Translates to: RFLLCPPGGVRA*HATPTGGPEWS
Trigger: GGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CAA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAACCGCAGGTTTCTGCTTaGCCCACCTGGTGGGGTACG +
Preference number: 3 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKPQVSA*PTWWGT
Trigger: CGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCGG...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CAA 90 bp CTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCCGAGGTCAACTTCCCGAGCTGATGGGGCCTaGAGAGGCGCCTCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: LPPATRRDTLHDTPRSTSRADGA*RGASAR
Trigger: CCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTCG...GGAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CAA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGGAAATCCCTCCTGGCTaGGGCTCGGGGATGCAGATG +
Preference number: 3 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWEIPPG*GSGMQM
Trigger: CATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTC...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR TCA 72 bp CAGACATCCCATTTCGATGCTTCCAGAAGCACAGCCTaGACCCAGGGACAGGAGCTGCCGCCCTCCCACTGG +
Preference number: 3 (lower is better)
Translates to: QTSHFDASRSTA*TQGQELPPSHW
Trigger: CCAGTGGGAGGGCGGCAGCTCCTGTCCCTGGGTTCAGGCTGTGCTTCTGGAAGCATCGAAATGGGATGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 72 bp CTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGTGGACACATGGATTTG +
Preference number: 3 (lower is better)
Translates to: LKRHPTGLIPWL*PPGSQGGHMDL
Trigger: CAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR GCA 72 bp CATAGCCTGGTGGTCAGAAATGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCT +
Preference number: 3 (lower is better)
Translates to: HSLVVRNECFWR*WTVARSLSTPS
Trigger: AGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 72 bp AGCCTGGTGGTCAGAAATGAGTGCTTCTGGCGCTGCTaGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: SLVVRNECFWRC*TVARSLSTPSS
Trigger: AGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 72 bp GAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTCTaGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACC +
Preference number: 3 (lower is better)
Translates to: ERHSLVVRNECF*RCWTVARSLST
Trigger: GGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CAA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCHRAHS*AVPSWV
Trigger: GACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTG...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR TCA 72 bp GTAAGAACAGGCTGCCCAGCACACTTCCTGGGCCACTaGGCCCTGGGCGTGAAAAGCAAAAGGGCCAGTGAG +
Preference number: 3 (lower is better)
Translates to: VRTGCPAHFLGH*ALGVKSKRASE
Trigger: CTCACTGGCCCTTTTGCTTTTCACGCCCAGGGCTCAGTGGCCCAGGAAGTGTGCTGGGCAGCCTGTTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CAA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGAAGGGCTGTGGCGGACTaGTCCCATGCTCTCACTGCA +
Preference number: 3 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGRAVAD*SHALTA
Trigger: TGCAGTGAGAGCATGGGACAAGTCCGCCACAGCCCT...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 72 bp TGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTaGTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTC +
Preference number: 3 (lower is better)
Translates to: CHPVSSGQPAQC*SGLWHPEIKGV
Trigger: GACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR GCA 72 bp TGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGC +
Preference number: 3 (lower is better)
Translates to: CCHPVSSGQPAQ*CSGLWHPEIKG
Trigger: GCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR GCA 72 bp AAACGCAAATTGTGGCAGATCTCCCTGGGATGGTGTTaGCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGG +
Preference number: 3 (lower is better)
Translates to: KRKLWQISLGWC*LREIPPGLGSG
Trigger: CCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCCAGGGAGATCTGCCACAATTTGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 72 bp CCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATA +
Preference number: 3 (lower is better)
Translates to: PTGGPEWSTEKA*GKASSADALRI
Trigger: TATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR GCA 72 bp CTTCTTCTCCTCCCTCTGCTCATATTGTCTTTGTGCTaGCATCCAGTCAGCAGCGGACAGCCAGCCCAATGC +
Preference number: 3 (lower is better)
Translates to: LLLLPLLILSLC*HPVSSGQPAQC
Trigger: GCATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGAGGAGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CAA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGACTGCTCATATTGTCTTaGTGCTGCCATCCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGLLILS*CCHPVS
Trigger: GCTGACTGGATGGCAGCACAAAGACAATATGAGCAG...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR-3UTR CAA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGACTCCCTCTGCTCATATaGTCTTTGTGCTGCCATCCA +
Preference number: 3 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGLPLLI*SLCCHP
Trigger: TGGATGGCAGCACAAAGACAATATGAGCAGAGGGAG...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR TCA 72 bp GAGGCACCAGAAACGATGTGCTCCCTGGTAGCATCCTaGGCTGCCCCTCTTGACTTTAATGCTAACCCTGCT +
Preference number: 3 (lower is better)
Translates to: EAPETMCSLVAS*AAPLDFNANPA
Trigger: AGCAGGGTTAGCATTAAAGTCAAGAGGGGCAGCTCAGGATGCTACCAGGGAGCACATCGTTTCTGGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR TCA 72 bp CCGGCTGGTGAATGTAGGGGAGGTTTCACCTTTAGATaGGGCACCAGAAACGATGTGCTCCCTGGTAGCATC +
Preference number: 3 (lower is better)
Translates to: PAGECRGGFTFR*GTRNDVLPGSI
Trigger: GATGCTACCAGGGAGCACATCGTTTCTGGTGCCTCATCTAAAGGTGAAACCTCCCCTACATTCACCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR GCA 72 bp GCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCGATaGTTCCAGAAGCACAGCCTGAACCCAGGGACAGGA +
Preference number: 3 (lower is better)
Translates to: AAFPQGSDIPFR*FQKHSLNPGTG
Trigger: TCCTGTCCCTGGGTTCAGGCTGTGCTTCTGGAAGCATCGAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 72 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTaGTCAGAAATGAGTGCTTCTGGCGCTGCTGGACTG +
Preference number: 3 (lower is better)
Translates to: LSVMRSRNVIAW*SEMSASGAAGL
Trigger: CAGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR-3UTR CAA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCCTCCCTGGGATGGTGTaGCCTAAGGGAAATCCCTCC +
Preference number: 3 (lower is better)
Translates to: AQARLRTQRSSDWISCPLLPGMV*PKGNPS
Trigger: GGAGGGATTTCCCTTAGGCAACACCATCCCAGGGAG...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CCA 72 bp AAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTaGTGGTCAGAAATGAGTGCTTCTGGCGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: KLSVMRSRNVIA*WSEMSASGAAG
Trigger: TCCAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
3UTR CCA 72 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTaGATTTCCTGTCCCCTCAGCTCACTTAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: AQARLRTQRSSD*ISCPLSSLKEA
Trigger: AGCCTCCTTAAGTGAGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR TCA 72 bp ACAACTAAAACCAAAAACAGCCAACACCCAATGGGTTaGGCTGGAGTAAGAACAGGCTGCCCAGCACACTTC +
Preference number: 3 (lower is better)
Translates to: TTKTKNSQHPMG*AGVRTGCPAHF
Trigger: GAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGGCTGTTTTTGGTTTTAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAGGGGTCCCTGGGGATaGAGCGGTGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLRGPWG*SGGSPG
Trigger: CCCTGGGCTGCCACCGCTCCATCCCCAGGGACCCCT...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCAAGGCCACCCCGCTaGCGTTCCGAGGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGPRPPR*RSEGHP
Trigger: AGGATGCCCCTCGGAACGGCAGCGGGGTGGCCTTGG...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGGGTGAGGCTTGGCGGTaGAGGTCAGTCCCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLGEAWR*RSVPRS
Trigger: CGAACGGGGGACTGACCTTCACCGCCAAGCCTCACC...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLECFWR*WTVARS
Trigger: GCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTC...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCTGGGGATGGAGCGGTaGCAGCCCAGGGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSLGMER*QPRVLP
Trigger: GGGGAGCACCCTGGGCTGCCACCGCTCCATCCCCAG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGCGCACGCTCATGAGCTaGGCCGGGGTGGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRRTLMS*AGVAVL
Trigger: CAACACAGCCACCCCGGCCCAGCTCATGAGCGTGCG...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGCCCCGTTCGTGTGGGTaGATGGGGGCCTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLPRSCG*MGAWTS
Trigger: AGAGGTCCAGGCCCCCATCCACCCACACGAACGGGG...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGAACCTCCCGAGGTATaGGCTGGGGCCCGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGEPPEV*AGARQL
Trigger: AAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTTC...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGGAACCTCCCGAGGTATaGGCTGGGGCCCGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWREPPEV*AGARQL
Trigger: AAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTTC...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGCTTCTGGCGCTGCTaGACTGTGGCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRCFWRC*TVARSL
Trigger: CAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCA...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCCTCCACGATGCTGCGTaGCACGGCACGCGTCACCCC +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSLHDAA*HGTRHP
Trigger: GGGGTGACGCGTGCCGTGGCACGCAGCATCGTGGAG...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGCGTCTCTCAGCTCCATaGCGGCAGCCGCGTCCCATA +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRRLSAP*RQPRPI
Trigger: TATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACG...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCCAAGGCCACCCCGCTaGCGTTCCGAGGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSPRPPR*RSEGHP
Trigger: AGGATGCCCCTCGGAACGGCAGCGGGGTGGCCTTGG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHGGVRA*HATPTG
Trigger: TCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACC...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSGGVRA*HATPTG
Trigger: TCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACC...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCGCTTTGCCCACCTGGTaGGGTACGCGCCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSALPTW*GTRLAR
Trigger: GCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGC...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCTGCTTTGCCCACCTaGTGGGGTACGCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRSALPT*WGTRLA
Trigger: TGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGCGGGGGAGGGCTGTaGCGGACTTGTCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTGGGGL*RTCPML
Trigger: GAGCATGGGACAAGTCCGCCACAGCCCTCCCCCGCC...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGCCCCACTGGAGGTCCTaGATGGTCCACAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRPHWRS*MVHREG
Trigger: GCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGG...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGCCCCACTGGAGGTCCTaGATGGTCCACAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLPHWRS*MVHREG
Trigger: GCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGG...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATCTCCACGATGCTGCGTaGCACGGCACGCGTCACCCC +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHLHDAA*HGTRHP
Trigger: GGGGTGACGCGTGCCGTGGCACGCAGCATCGTGGAG...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCTCGGTACTCCACGATaGTGCGTGCCACGGCACGCG +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSLGTPR*CVPRHA
Trigger: CGCGTGCCGTGGCACGCAGCATCGTGGAGTACCGAG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCAGGTCCTCACTCTaGAGGCTCAGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRSRSSL*RLREVG
Trigger: CCCCACTTCCCTGAGCCTGCAGAGTGAGGACCTGGA...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCCCGCCAGCTTCCCGTaGCCGTTGCTTGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRPASFP*PLLGEL
Trigger: GAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLLIPWL*PPGSQG
Trigger: ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAG...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCCCAGGGACAGGAGCTaGCGCCCTCCCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSPRDRS*RPPTGE
Trigger: CTCTCCAGTGGGAGGGCGGCAGCTCCTGTCCCTGGG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCCCGCCGCAGGGAACTaGGAGAGTGCTGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRPAAGN*ESAALS
Trigger: GCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGTCCCGAGGTATGGGCTaGGGCCCGCCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRSRGMG*GPPASR
Trigger: ACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGA...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTAGGGCCAGTGAGGTTTaGCTGGGACTCAGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGRASEV*LGLSSP
Trigger: TGGGGAGCTGAGTCCCAGCCAAACCTCACTGGCCCT...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 72 bp GAGGCTTCACAGAGGTCCCGGCGAGCTGATGGGGCCTaGAGAGGCGCCTCTGCAAGGCCTCAAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EASQRSRRADGA*RGASARPQGGD
Trigger: GTCCCCACCTTGAGGCCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTCGCCGGGACCTCTGTGAAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCGGGAGAGTGCTGCGCTaGGCTGCCCTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSGRVLR*AALAAH
Trigger: GTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCC...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATAAGGCAGCTCTGCCCTaGAGCGTCACCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHKAALP*SVTPQG
Trigger: GCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTT...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGCCTGGTGGTCAGAAATaGGTGCTTCTGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRPGGQK*VLLALL
Trigger: CAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGG...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGTACTCCACGATGCTaGGTGCCACGGCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTGTPRC*VPRHAS
Trigger: TGACGCGTGCCGTGGCACGCAGCATCGTGGAGTACC...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCTCGGTACTCCACGATaGTGCGTGCCACGGCACGCG +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSLGTPR*CVPRHA
Trigger: CGCGTGCCGTGGCACGCAGCATCGTGGAGTACCGAG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCTGCGAAAGGGCCCATaGTCACGGCGGAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSLRKGP*SRRKST
Trigger: CGTGGACTTCCGCCGTGAGCATGGGCCCTTTCGCAG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGCTGCGAAAGGGCCCATaGTCACGGCGGAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVLRKGP*SRRKST
Trigger: CGTGGACTTCCGCCGTGAGCATGGGCCCTTTCGCAG...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTCTCCCCGCAGGTTTCTaGTTTGCCCACCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTLPAGF*FAHLVG
Trigger: CCCCACCAGGTGGGCAAAGCAGAAACCTGCGGGGAG...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGGQPAQ*CSGLWH
Trigger: ATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCC...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSECFWR*WTVARS
Trigger: GCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTC...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGGAGTAAGAACAGGCTaGCCAGCACACTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGGVRTG*PAHFLG
Trigger: GCCCAGGAAGTGTGCTGGGCAGCCTGTTCTTACTCC...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCCAGGGTGCTCCCCATaGTCCGCCAGGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRPGCSP*SARIRL
Trigger: GAGCCTGATCCTGGCGGACCATGGGGAGCACCCTGG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCTGGGGATGGAGCGGTaGCAGCCCAGGGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWLGMER*QPRVLP
Trigger: GGGGAGCACCCTGGGCTGCCACCGCTCCATCCCCAG...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TCCTGGAAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCGGTCCGAGGGGTCCCTaGGGATGGAGCGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SWKRVPFPSPRPAMLLGAGPRGP*GWSGGS
Trigger: GCTGCCACCGCTCCATCCCCAGGGACCCCTCGGACC...GGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTTCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGCTCTCAGCAAACACCTaGTGCCGGATCCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLLSANT*CRILSR
Trigger: CCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAG...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCGTTCGTGTGGGTGGATaGGGGCCTGGACCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGVRVGG*GPGPLS
Trigger: GCTGAGAGGTCCAGGCCCCCATCCACCCACACGAAC...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGAGTCCCCCGTTCGTGTaGGTGGATGGGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRSPPFV*VDGGLD
Trigger: GTCCAGGCCCCCATCCACCCACACGAACGGGGGACT...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCCCTGCAAGTTCCAGGTaGCCAGCCTCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSPASSR*PASAQA
Trigger: GGCCTGTGCTGAGGCTGGCCACCTGGAACTTGCAGG...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGCACCCCGGGGTTGTTaGCCTTCTCCACGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVAPRGC*PSPRNS
Trigger: GCTGTTCCGTGGAGAAGGCCAACAACCCCGGGGTGC...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTTGCTTCTGGCGCTGCTaGACTGTGGCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGCFWRC*TVARSL
Trigger: CAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCA...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGGAATCCAAGGGTTCGTaGGGCCTTCTCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLESKGS*GLLSPQ
Trigger: CTGTGGTGAGAGAAGGCCTCACGAACCCTTGGATTC...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACACGGCGCCGCCGCAGTTaGGTTTACCCCGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTRRRRS*VYPGKK
Trigger: CTTTTTGCCGGGGTAAACGCAACTGCGGCGGCGCCG...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATGCCTCTCGGCCGCTCTaGGGGGCGCCGGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADASRPL*GAPVPL
Trigger: AAGAGGAACCGGCGCCCCGCAGAGCGGCCGAGAGGC...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCGGTACTCCACGATGCTaGGTGCCACGGCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSGTPRC*VPRHAS
Trigger: TGACGCGTGCCGTGGCACGCAGCATCGTGGAGTACC...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCCTGGAAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCCCAAGGCCACCCCGCTaGCGTTCCGAGGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SWKRVPFPSPRPAMLLGAPRPPR*RSEGHP
Trigger: AGGATGCCCCTCGGAACGGCAGCGGGGTGGCCTTGG...GGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCGGCGGACTTGTCCCATaGTCTCACTGCAGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGGGLVP*SHCSEA
Trigger: TGCCTCGCTGCAGTGAGAGCATGGGACAAGTCCGCC...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCTCACTGGTCAGGCCCTaGAAGCCGACTACGCCGCTT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSSLVRP*KPTTPL
Trigger: AAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGA...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTCACTGGTCAGGCCCTaGAAGCCGACTACGCCGCTT +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSSLVRP*KPTTPL
Trigger: AAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGA...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTAGGGGTCCCTGGGGATaGAGCGGTGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGRGPWG*SGGSPG
Trigger: CCCTGGGCTGCCACCGCTCCATCCCCAGGGACCCCT...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGGTCCGAGGGGTCCCTaGGGATGGAGCGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGGPRGP*GWSGGS
Trigger: GCTGCCACCGCTCCATCCCCAGGGACCCCTCGGACC...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGTTCGTGTGGGTGGATaGGGGCCTGGACCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGVRVGG*GPGPLS
Trigger: GCTGAGAGGTCCAGGCCCCCATCCACCCACACGAAC...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCCTGCAAGTTCCAGGTaGCCAGCCTCAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSPASSR*PASAQA
Trigger: GGCCTGTGCTGAGGCTGGCCACCTGGAACTTGCAGG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACAGCACCCCGGGGTTGTTaGCCTTCTCCACGGAACAGC +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTAPRGC*PSPRNS
Trigger: GCTGTTCCGTGGAGAAGGCCAACAACCCCGGGGTGC...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTTGGCTGTGCCCTCCTaGGTCCCAGGGTGGACACAT +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSLAVPS*VPGWTH
Trigger: ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAA...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATCTGCTTTGCCCACCTaGTGGGGTACGCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTSALPT*WGTRLA
Trigger: TGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCATCGCTCTCCCAGAGTaGATAGAAGCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSIALPE*IEAAGL
Trigger: CAGCCCTGCGGCTTCTATTCACTCTGGGAGAGCGAT...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGGGTCCTCCACCTTCTTaGAGCCACCGATATACTCTC +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRGPPPS*SHRYTL
Trigger: GAGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACC...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGAGAGACTTCGAGCCTTaGGGGTTCTTGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRRDFEP*GFLVLM
Trigger: CATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCT...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATCCAGAAGCACAGCCTaGACCCAGGGACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTSRSTA*TQGQEL
Trigger: CAGCTCCTGTCCCTGGGTTCAGGCTGTGCTTCTGGA...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTGCCTCTCGGCCGCTCTaGGGGGCGCCGGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFASRPL*GAPVPL
Trigger: AAGAGGAACCGGCGCCCCGCAGAGCGGCCGAGAGGC...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGCTGAAGTTACAGGCTaGGCTGAACTTGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGAEVTG*AELAAM
Trigger: CATAGCCGCAAGTTCAGCGCAGCCTGTAACTTCAGC...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGLIPWL*PPGSQG
Trigger: ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAG...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCGCAGGTTTCTGCTTTaGCCACCTGGTGGGGTACGC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSRRFLL*PPGGVR
Trigger: GCGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCCAGCCAGCCCAATGCTaGTCAGGTCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSQPAQC*SGLWHP
Trigger: TGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTG...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGGTGGTCAGAAATGAGTaGTTCTGGCGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRVVRNE*FWRCWT
Trigger: AGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCAC...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGTCCCTGGGATGGTGTTaGCTAAGGGAAATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLSLGWC*LREIPP
Trigger: AGGAGGGATTTCCCTTAGGCAACACCATCCCAGGGA...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCGCGTCCGCGCGGGTGTaGGTCACTGGTCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPASARV*VTGQAL
Trigger: CAGGGCCTGACCAGTGACCCACACCCGCGCGGACGC...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGTTGGGCAGGGTCGGCTaGTTTAGCTCCGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVLGRVG*FSSVQN
Trigger: GTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAA...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAATGCTTCTGGCGCTGCTaGACTGTGGCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKCFWRC*TVARSL
Trigger: CAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCA...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGATCGCTCTCCCAGAGTaGATAGAAGCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRIALPE*IEAAGL
Trigger: CAGCCCTGCGGCTTCTATTCACTCTGGGAGAGCGAT...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTGCACAGCTAGAAGCTTaGTGCTGTTTTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGAQLEA*CCFPGV
Trigger: CACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGC...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTCCTGGTGGTCAGAAATaGGTGCTTCTGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGPGGQK*VLLALL
Trigger: CAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGG...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCACTTCCTGGGCCACTaGGCCCTGGGCGTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWHFLGH*ALGVKS
Trigger: GCTTTTCACGCCCAGGGCTCAGTGGCCCAGGAAGTG...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATGGGGCCCCTTCCACTTaGGGATGTTGGGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADGAPST*GCWAGS
Trigger: CGACCCTGCCCAACATCCGCAAGTGGAAGGGGCCCC...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGCCACACAGAGGCACCTaGCGTGGTGCAAATACACAC +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVPHRGT*RGANTH
Trigger: GTGTGTATTTGCACCACGGCAGGTGCCTCTGTGTGG...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCGCGTCCGCGCGGGTGTaGGTCACTGGTCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLASARV*VTGQAL
Trigger: CAGGGCCTGACCAGTGACCCACACCCGCGCGGACGC...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCCCCGCCGCAGGGAACTaGGAGAGTGCTGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPPAAGN*ESAALS
Trigger: GCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGG...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTGCTTTGCCCACCTGGTaGGGTACGCGCCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFALPTW*GTRLAR
Trigger: GCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGC...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTTGCTGCTCAGGTCTGTaGCATCCAGAGATAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGCCSGL*HPEIKG
Trigger: GCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCA...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCAGAAATGAGTGCTTCTaGCGCTGCTGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSRNECF*RCWTVA
Trigger: GGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCT...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACAAAATCCCTCCTGGCTTaGGCTCGGGGATGCAGATGC +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTKSLLA*ARGCRC
Trigger: GCATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTT...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGTGGCGCCTACACCACTaGCCAATGCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWWRLHH*PMPGPP
Trigger: TGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCA...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGAAGTCCACGATGCTaGGGGCCATTTTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGGSPRC*GPFSPR
Trigger: TCTCGGAGAAAATGGCCCTCAGCATCGTGGACTTCC...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTGAAGTGGGGCTCGGGTaGGGCTTGGCGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFEVGLG*GLAVKV
Trigger: GACCTTCACCGCCAAGCCTCACCCGAGCCCCACTTC...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCCTGTGGCCCGCAGCCTaGGCACCCCTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPLWPAA*APLLLL
Trigger: GAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAG...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATACAGCACGGGCCCCCTaGCTCCAGCCTAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNTARAP*LQPRRP
Trigger: CGGACGCCTAGGCTGGAGGCAGGGGGCCCGTGCTGT...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGGTGGCAGCCCAGGGTaGTCCCCATGGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNGGSPG*SPWSAR
Trigger: CCTGGCGGACCATGGGGAGCACCCTGGGCTGCCACC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTCGTCTCTCAGCTCCATaGCGGCAGCCGCGTCCCATA +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGRLSAP*RQPRPI
Trigger: TATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACG...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCAGGAGGGTCAGGGCTaGCAGGTGAAGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRQEGQG*QVKVNK
Trigger: CTTGTTAACCTTCACCTGGCAGCCCTGACCCTCCTG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCGTGGTCAGAAATGAGTaGTTCTGGCGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSVVRNE*FWRCWT
Trigger: AGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCAC...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAAGCTCGGGGATGCAGATaGCTAGTGGCAGGCACGCAT +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKARGCR*LVAGTH
Trigger: ATGCGTGCCTGCCACTAGGCATCTGCATCCCCGAGC...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCGCTTGGGCTCGGGGATaGAGATGCCTAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTAWARG*RCLVAG
Trigger: GCCTGCCACTAGGCATCTGCATCCCCGAGCCCAAGC...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCAAATTACCTTTCACTTaGCCGCCTCTCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSKLPFT*PPLGRS
Trigger: AGAGCGGCCGAGAGGCGGCCAAGTGAAAGGTAATTT...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCGTTGATGTTAACACGTaGGGTGAGGGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSVDVNT*GEGHSC
Trigger: ACAGCTGTGCCCCTCACCCCACGTGTTAACATCAAC...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTTGCTGTCTGGCCCTTaGCCAAAATCCCCTAAGATA +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRLLSGP*PKSPKI
Trigger: TATCTTAGGGGATTTTGGCCAAGGGCCAGACAGCAA...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCCCCAGGGTGGACACATaGATTTGGTGTCATCATCGC +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSPRVDT*IWCHHR
Trigger: GCGATGATGACACCAAATCCATGTGTCCACCCTGGG...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCTCTGCTTTGCCCACCTaGTGGGGTACGCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTSALPT*WGTRLA
Trigger: TGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCCCAATGGGTTGAGCTaGAGTAAGAACAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSPNGLS*SKNRLP
Trigger: GGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 72 bp CTGGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTaGGGCTCGGGGATGCAGATGCCTAGTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGWCCLREIPPG*GSGMQMPSGRH
Trigger: GTGCCTGCCACTAGGCATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCTGGCGCCTACACCACTaGCCAATGCCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVWRLHH*PMPGPP
Trigger: TGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCA...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp GCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGGGGGAGAGTGCTGCGCTaGGCTGCCCTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ASASSAVKRKLWQISLGWGRVLR*AALAAH
Trigger: GTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCC...CCATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTGTGGCCAGGTGGTaGGGCTGCTGCTCCGCTAGC +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNAVARW*GCCSAS
Trigger: GCTAGCGGAGCAGCAGCCTCACCACCTGGCCACAGC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGGGTGAGGCTTGGCGGTaGAGGTCAGTCCCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQGEAWR*RSVPRS
Trigger: CGAACGGGGGACTGACCTTCACCGCCAAGCCTCACC...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGGAAGTGGGGCTCGGGTaGGGCTTGGCGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQEVGLG*GLAVKV
Trigger: GACCTTCACCGCCAAGCCTCACCCGAGCCCCACTTC...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGCTCACCACAGCCCAGTaGCCTGTGAAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVLTTAQ*PVKTFF
Trigger: AAAGAAGGTTTTCACAGGTCACTGGGCTGTGGTGAG...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCATCATCGCTCGTGCTTaGTGTTGGCTTCACTTCGCT +
Preference number: 4 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGIIARA*CWLHFA
Trigger: AGCGAAGTGAAGCCAACATCAAGCACGAGCGATGAT...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGAAGGCAGCTCTGCCCTaGAGCGTCACCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQKAALP*SVTPQG
Trigger: GCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTT...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCTGTGGCCCGCAGCCTaGGCACCCCTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQLWPAA*APLLLL
Trigger: GAGGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCTGAGCAGAGTGCCTaGTCACAGTTAAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SALPTWWGTRLARHPHWRSEQSA*SQLKAF
Trigger: GAAAGCTTTTAACTGTGATCAGGCACTCTGCTCAGA...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCGAGCTGATGGGGCCTTaGGAGGCGCCTCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLELMGP*EAPLQG
Trigger: GCCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTC...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGGGAAGGCCGCACCACTaGAGAAGAGCTCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWGRPHH*RRALWL
Trigger: TAGCCAGAGAGCTCTTCTGCAGTGGTGCGGCCTTCC...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGGTGGCAGCCCAGGGTaGTCCCCATGGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLGGSPG*SPWSAR
Trigger: CCTGGCGGACCATGGGGAGCACCCTGGGCTGCCACC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATATCTCAAACTTGACCTaGTCCAGCTTGGTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHISNLT*SSLVAP
Trigger: AGGCGCCACCAAGCTGGAGCAGGTCAAGTTTGAGAT...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTGCCTCCCATCCCTTGTaGCTCCAAAGGCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFASHPL*LQRPPR
Trigger: CCGTGGAGGCCTTTGGAGGCACAAGGGATGGGAGGC...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGCTGGTTTAGCTCCGTaGAGAACTTTTCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTAGLAP*RTFPRP
Trigger: AGGCCTTGGAAAAGTTCTGCACGGAGCTAAACCAGC...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGGGGGCCCCTTCCACTTaGGGATGTTGGGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMGAPST*GCWAGS
Trigger: CGACCCTGCCCAACATCCGCAAGTGGAAGGGGCCCC...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCCGAGGTCAACTTCCGCTTCCCGTGCCCGTTaGTTGGCGAGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPATRRDTLHDTPRSTSASRAR*LASSPV
Trigger: CACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGC...GGAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADLIPWL*PPGSQG
Trigger: ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAG...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCGCAGGTTTCTGCTTTaGCCACCTGGTGGGGTACGC +
Preference number: 4 (lower is better)
Translates to: KRQLCPEASPHRAHSLAVRRFLL*PPGGVR
Trigger: GCGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCG...CACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGGCGGGTGTGGGTCACTaGTCAGGCCCTGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQAGVGH*SGPGSR
Trigger: TCGGCTTCCAGGGCCTGACCAGTGACCCACACCCGC...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATAAATTACCTTTCACTTaGCCGCCTCTCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHKLPFT*PPLGRS
Trigger: AGAGCGGCCGAGAGGCGGCCAAGTGAAAGGTAATTT...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCACGCTCATGAGCTaGGCCGGGGTGGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLRTLMS*AGVAVL
Trigger: CAACACAGCCACCCCGGCCCAGCTCATGAGCGTGCG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTAGTCCCCCGTTCGTGTaGGTGGATGGGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPSPPFV*VDGGLD
Trigger: GTCCAGGCCCCCATCCACCCACACGAACGGGGGACT...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TCCTGGAAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCTTGGGCAGGGTCGGCTaGTTTAGCTCCGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SWKRVPFPSPRPAMLLGALGRVG*FSSVQN
Trigger: GTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAA...GGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGGTGGGGTACGCGCCTaGCACGCCACCCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLGGVRA*HATPTG
Trigger: TCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAACGTCATAGCCTGGTaGTCAGAAATGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLNVIAW*SEMSAS
Trigger: AGAAGCACTCATTTCTGACCACCAGGCTATGACGTT...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGAAGGGAAATCCCTCCTaGCTTGGGCTCGGGGATGCA +
Preference number: 4 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWKGNPS*LGLGDA
Trigger: TGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTT...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAACAGCTCCCCAGCCTCTaGCTCAAGCCCGATTACGAA +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKQLPSL*LKPDYE
Trigger: TTCGTAATCGGGCTTGAGCCAGAGGCTGGGGAGCTG...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCTGCGGCTCGGAAGCCTaGGCCCAGCCCGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLCGSEA*AQPGTA
Trigger: TGCTGTCCCGGGCTGGGCTCAGGCTTCCGAGCCGCA...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTGCGGCTCGGAAGCCTaGGCCCAGCCCGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSACGSEA*AQPGTA
Trigger: TGCTGTCCCGGGCTGGGCTCAGGCTTCCGAGCCGCA...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCATCATCGCTCGTGCTTaGTGTTGGCTTCACTTCGCT +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSIIARA*CWLHFA
Trigger: AGCGAAGTGAAGCCAACATCAAGCACGAGCGATGAT...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCTGGTGGTCAGAAATaGGTGCTTCTGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KRQLCPEASPHRAHSLAVPGGQK*VLLALL
Trigger: CAGCAGCGCCAGAAGCACTCATTTCTGACCACCAGG...CACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGCCACTCAATGTATCTaGGCAGAGTGCCTGATCACA +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGATQCI*AECLIT
Trigger: TGTGATCAGGCACTCTGCTCAGATACATTGAGTGGC...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACAGAGGTGATACCACCCTaGGAGAATTCTTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTEVIPP*ENSCPA
Trigger: TGCAGGACAAGAATTCTCTCAGGGTGGTATCACCTC...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCGGACAGGAGGGTTCTTaGTACTGGTCCACATTTAGT +
Preference number: 4 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSGQEGS*YWSTFS
Trigger: ACTAAATGTGGACCAGTATCAAGAACCCTCCTGTCC...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATCCCGGCAAAAAGTCCTaGGCCCAACTCGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNPGKKS*AQLGRG
Trigger: TCCCCGCCCGAGTTGGGCGCAGGACTTTTTGCCGGG...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CACAACCAACTGTCCCTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCGGCGCCGCCGCAGTTaGGTTTACCCCGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: HNQLSLPPATRRDTLHDTRRRRS*VYPGKK
Trigger: CTTTTTGCCGGGGTAAACGCAACTGCGGCGGCGCCG...GGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAGGGACAGTTGGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTACAGCACGGGCCCCCTaGCTCCAGCCTAGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSATARAP*LQPRRP
Trigger: CGGACGCCTAGGCTGGAGGCAGGGGGCCCGTGCTGT...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTACACCACTGACCAATaGCAGGTCCTCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSYTTDQ*QVLHLL
Trigger: AAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTA...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCTGAGCTGCCCTTGCTaGTCACACAGATCTCAAACT +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRLSCPC*SHRSQT
Trigger: AGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTAGGGAACTGGGAGAGTaGTGCGCTGAGCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFRELGE*CAELPL
Trigger: CAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCT...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCCTAGGTCCTCAACGCTaGGAAAGGGCCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTLGPQR*ERAHAH
Trigger: GTGAGCATGGGCCCTTTCGCAGCGTTGAGGACCTAG...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTGQPAQ*CSGLWH
Trigger: ATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCC...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCATATTGTCTTTGTGCTaGCATCCAGTCAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSILSLC*HPVSSG
Trigger: TCCGCTGCTGACTGGATGGCAGCACAAAGACAATAT...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTATATTGTCTTTGTGCTaGCATCCAGTCAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTILSLC*HPVSSG
Trigger: TCCGCTGCTGACTGGATGGCAGCACAAAGACAATAT...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAATCCACTTGCGGATGTTaGGCAGGGTCGGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKSTCGC*AGSAGL
Trigger: TAAACCAGCCGACCCTGCCCAACATCCGCAAGTGGA...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCGTGGACACATGGATTTaGTGTCATCATCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSVDTWI*CHHRSC
Trigger: GCACGAGCGATGATGACACCAAATCCATGTGTCCAC...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCAGGAACGTCATAGCCTaGTGGTCAGAAATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSRNVIA*WSEMSA
Trigger: AGCACTCATTTCTGACCACCAGGCTATGACGTTCCT...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTCCTCTATTTACCCAGTaGTGTGACCTTGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGPLFTQ*CDLEEV
Trigger: GACCTCCTCAAGGTCACACCACTGGGTAAATAGAGG...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAAGGTCAGAGAAGCCACTaGGTTTACACTGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKGQRSH*VYTAWG
Trigger: TCCCCACGCAGTGTAAACCCAGTGGCTTCTCTGACC...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACACTGGCTAAAGGGATTTaGGACATCCGGCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTLAKGI*DIRLVN
Trigger: ATTCACCAGCCGGATGTCCCAAATCCCTTTAGCCAG...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTCAAAGGTCATCTGATTaGATTTCCTGTCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTQRSSD*ISCPLS
Trigger: GCTGAGGGGACAGGAAATCCAATCAGATGACCTTTG...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATAGTTACAGGCTGCGCTaGACTTGCGGCTATGGGACA +
Preference number: 4 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADSYRLR*TCGYGT
Trigger: TGTCCCATAGCCGCAAGTTCAGCGCAGCCTGTAACT...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAACACAGATCTCAAACTTaGCCTGCTCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKHRSQT*PAPAWW
Trigger: CCACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTG...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCGGAAGTCCACGATGCTaGGGGCCATTTTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVGSPRC*GPFSPR
Trigger: TCTCGGAGAAAATGGCCCTCAGCATCGTGGACTTCC...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTACAAGGGTCAGGTCGTaGCTTCCCACCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGTRVRS*LPTLNL
Trigger: GAGGTTCAAGGTGGGAAGTCACGACCTGACCCTTGT...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp AGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGCAGCCCAGTGACCTGTaGAAACCTTCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SVTPQGSFLGCALLGPRVQPSDL*KPSLSF
Trigger: AAAGCTTAAAGAAGGTTTTCACAGGTCACTGGGCTG...CACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCCCCACTGGAGGTCCTaGATGGTCCACAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLPHWRS*MVHREG
Trigger: GCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAGAGGTCCCGGCGAGCTaGTGGGGCCTTGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVREVPAS*WGLERR
Trigger: GCGCCTCTCAAGGCCCCATCAGCTCGCCGGGACCTC...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCTCCCTGGTAGCATCCTaGGCTGCCCCTCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTSLVAS*AAPLDF
Trigger: AAAGTCAAGAGGGGCAGCTCAGGATGCTACCAGGGA...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCAAGCAAAAGGGCCAGTaGGGTTTGGCTGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVKQKGQ*GLAGTQ
Trigger: CTGAGTCCCAGCCAAACCTCACTGGCCCTTTTGCTT...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCCGAGGTCAACTTCCCTAGGTCCTCAACGCTaGGAAAGGGCCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: LPPATRRDTLHDTPRSTSLGPQR*ERAHAH
Trigger: GTGAGCATGGGCCCTTTCGCAGCGTTGAGGACCTAG...GGAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCTCAGCAAACACCTGGTaGCGGATCCTGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVSANTW*RILSRK
Trigger: CTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGA...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTTTTCCAGGAGTGTCATaGACACCACCTCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGFPGVS*TPPLAP
Trigger: GGGTGCGAGAGGTGGTGTGCATGACACTCCTGGAAA...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCTGTCAAGCAGTTCTTaGACAGCTAGAAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSLSSSS*TARSLM
Trigger: CATCAAGCTTCTAGCTGTGCAAGAACTGCTTGACAG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTTCCCGTGCCCGTTaGTTGGCGAGCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNASRAR*LASSPV
Trigger: CACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTTGTCATCATCGCTCGTaGTTGATGTTGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTCHHRS*LMLASL
Trigger: AAGTGAAGCCAACATCAAGCACGAGCGATGATGACA...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp AGCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGCTCCCCGCAGGTTTCTaGTTTGCCCACCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLSVFSCETQIVADLPGMLPAGF*FAHLVG
Trigger: CCCCACCAGGTGGGCAAAGCAGAAACCTGCGGGGAG...CATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCAGCCAGCCCAATGCTaGTCAGGTCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCQPAQC*SGLWHP
Trigger: TGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTG...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGAGTGCTTCTGGCGCTaGTGGACTGTGGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLECFWR*WTVARS
Trigger: GCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCACTC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTCCCCAAGACCAGCGATaGTTCTTGGAGCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPPQDQR*FLEPGG
Trigger: GCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGG...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGTCCCGGCTCTTTCTATaGGAGAAACTTAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRSRLFL*EKLSIA
Trigger: AGCGATGCTAAGTTTCTCCCATAGAAAGAGCCGGGA...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCTGAACTTGCGGCTATaGGACAGGTCCGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLLNLRL*DRSEGS
Trigger: GGACCCCTCGGACCTGTCCCATAGCCGCAAGTTCAG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTACTGGAGGTCCTGAATaGTCCACAGAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGTGGPE*STEKAW
Trigger: CCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGT...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTAGGAACGTCATAGCCTaGTGGTCAGAAATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGRNVIA*WSEMSA
Trigger: AGCACTCATTTCTGACCACCAGGCTATGACGTTCCT...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGGCCAGTGAGGTTTGGCTaGGACTCAGCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASASSAVKRKLWQISLGWPVRFG*DSAPQP
Trigger: AGGCTGGGGAGCTGAGTCCCAGCCAAACCTCACTGG...CCATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 72 bp GCACCCCTTCTTCTCCTCCCTCTGCTCATATTGTCTTaGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: APLLLLPLLILS*CCHPVSSGQPA
Trigger: GGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGAGGAGAAGAAGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATCGTGACTTCCCACCTTaGACCTCCCGAGGTATGGGC +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNRDFPP*TSRGMG
Trigger: GCCCATACCTCGGGAGGTTCAAGGTGGGAAGTCACG...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCGAATCCAAGGGTTCGTaGGGCCTTCTCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCESKGS*GLLSPQ
Trigger: CTGTGGTGAGAGAAGGCCTCACGAACCCTTGGATTC...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAAGGCAGCTCTGCCCTaGAGCGTCACCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLKAALP*SVTPQG
Trigger: GCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTT...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTCAAGGCCTCAAGTGCTaGTGCTCTGAGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTQGLKC*CSENKN
Trigger: ATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTG...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTCTGAGCAGAGTGCCTaGTCACAGTTAAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSSEQSA*SQLKAF
Trigger: GAAAGCTTTTAACTGTGATCAGGCACTCTGCTCAGA...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGCACATAGCAAAACCTaGGTCTGCATCCCTCTATTT +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHAHSKT*VCIPLF
Trigger: AAATAGAGGGATGCAGACTCAGGTTTTGCTATGTGC...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATAACACAAAGGTCATCTaGTTGGATTTCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHNTKVI*LDFLSP
Trigger: AGGGGACAGGAAATCCAATCAGATGACCTTTGTGTT...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCATCTCAAACTTGACCTaGTCCAGCTTGGTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVISNLT*SSLVAP
Trigger: AGGCGCCACCAAGCTGGAGCAGGTCAAGTTTGAGAT...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGCCTCCCATCCCTTGTaGCTCCAAAGGCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLASHPL*LQRPPR
Trigger: CCGTGGAGGCCTTTGGAGGCACAAGGGATGGGAGGC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGACCCGCCAGCTTCCCGTaGCCGTTGCTTGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRPASFP*PLLGEL
Trigger: GAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGG...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGTCATCATCGCTCGTaGTTGATGTTGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTCHHRS*LMLASL
Trigger: AAGTGAAGCCAACATCAAGCACGAGCGATGATGACA...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCCACTGGGTTTACACTaGGTGGGGACAGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLPLGLH*VGTGGF
Trigger: GAACCCTCCTGTCCCCACGCAGTGTAAACCCAGTGG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCTCTCAGCAAACACCTaGTGCCGGATCCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQLSANT*CRILSR
Trigger: CCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTGCAGGCTCAGGGAAGTaGGGCTCGGGTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAAGSGK*GSGEAW
Trigger: CCAAGCCTCACCCGAGCCCCACTTCCCTGAGCCTGC...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCCCCAGGGTGGACACATaGATTTGGTGTCATCATCGC +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVPRVDT*IWCHHR
Trigger: GCGATGATGACACCAAATCCATGTGTCCACCCTGGG...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCAGGGTGGACACATaGATTTGGTGTCATCATCGC +
Preference number: 4 (lower is better)
Translates to: KRQLCPEASPHRAHSLAVPRVDT*IWCHHR
Trigger: GCGATGATGACACCAAATCCATGTGTCCACCCTGGG...CACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp AGCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGTTGGCTGTGCCCTCCTaGGTCCCAGGGTGGACACAT +
Preference number: 4 (lower is better)
Translates to: SLSVFSCETQIVADLPGMLAVPS*VPGWTH
Trigger: ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAA...CATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATTTGGCTGTGCCCTCCTaGGTCCCAGGGTGGACACAT +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNLAVPS*VPGWTH
Trigger: ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAA...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMSTEKA*GKASSA
Trigger: AGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGA...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGAACTGGAGGTCCTGAATaGTCCACAGAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGTGGPE*STEKAW
Trigger: CCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGT...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGAAGAAATGAGTGCTTCTaGCGCTGCTGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGRNECF*RCWTVA
Trigger: GGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCT...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGAGTTACAGGCTGCGCTaGACTTGCGGCTATGGGACA +
Preference number: 4 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMSYRLR*TCGYGT
Trigger: TGTCCCATAGCCGCAAGTTCAGCGCAGCCTGTAACT...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCTGGAAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCATGTTGAGCCGCTCCTaGTTCACTAGAATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SWKRVPFPSPRPAMLLGAMLSRS*FTRMLL
Trigger: CAGCAACATTCTAGTGAATCAGGAGCGGCTCAACAT...GGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAAGCTGTGGCCAGGTGGTaGGGCTGCTGCTCCGCTAGC +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKAVARW*GCCSAS
Trigger: GCTAGCGGAGCAGCAGCCTCACCACCTGGCCACAGC...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTACGTGACTTCCCACCTTaGACCTCCCGAGGTATGGGC +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLRDFPP*TSRGMG
Trigger: GCCCATACCTCGGGAGGTTCAAGGTGGGAAGTCACG...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCACAAGGGTCAGGTCGTaGCTTCCCACCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: TASPMLLRSVASRDKRRLTRVRS*LPTLNL
Trigger: GAGGTTCAAGGTGGGAAGTCACGACCTGACCCTTGT...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAGAGACTTCGAGCCTTaGGGGTTCTTGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPRDFEP*GFLVLM
Trigger: CATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCT...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTCCCGGCAAAAAGTCCTaGGCCCAACTCGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSAPGKKS*AQLGRG
Trigger: TCCCCGCCCGAGTTGGGCGCAGGACTTTTTGCCGGG...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTGTGGCGGACTTGTCCCATGCTCTCACTGCAGCGAGGCAGGTTAATCTGTTTATACGCCGCTTCGGTCTaGGTGTCCCGGCTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LWRTCPMLSLQRGRLICLYAASV*VSRLFL
Trigger: TAGAAAGAGCCGGGACACGCAGACCGAAGCGGCGTA...TAAACAGATTAACCTGCCTCGCTGCAGTGAGAGCATGGGACAAGTCCGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AGCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGCAGCCAGCCCAATGCTaGTCAGGTCTGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SLSVFSCETQIVADLPGMQPAQC*SGLWHP
Trigger: TGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTG...CATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCGTGGTCAGAAATGAGTaGTTCTGGCGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPVVRNE*FWRCWT
Trigger: AGTCCAGCAGCGCCAGAAGCACTCATTTCTGACCAC...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGTGCAGAAGAGCTCTCTaGCTAGGGAGGAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQCRRAL*LGRKPS
Trigger: ACTGGGCTTCCTCCCTAGCCAGAGAGCTCTTCTGCA...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGACCCCGTTCGTGTGGGTaGATGGGGGCCTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRPRSCG*MGAWTS
Trigger: AGAGGTCCAGGCCCCCATCCACCCACACGAACGGGG...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAATCCCGAGGTATGGGCTaGGGCCCGCCAGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKSRGMG*GPPASR
Trigger: ACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGA...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAATTGCTGTCTGGCCCTTaGCCAAAATCCCCTAAGATA +
Preference number: 4 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKLLSGP*PKSPKI
Trigger: TATCTTAGGGGATTTTGGCCAAGGGCCAGACAGCAA...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTTGCGCGGGGATCAGGTaGTGGAACTTTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFCAGIR*WNFSFL
Trigger: GAGGAAAGAAAAGTTCCACCACCTGATCCCCGCGCA...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCGTGGACACATGGATTTaGTGTCATCATCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVVDTWI*CHHRSC
Trigger: GCACGAGCGATGATGACACCAAATCCATGTGTCCAC...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGACTGGAGGTCCTGAATaGTCCACAGAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQTGGPE*STEKAW
Trigger: CCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGT...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAAGCTTTGCCCACCTGGTaGGGTACGCGCCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKALPTW*GTRLAR
Trigger: GCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGC...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTCTTCTTGGAGCCAGGTaGCCCCAAAAGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPLLGAR*PQKDGL
Trigger: AAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAG...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTCCAGGAAGGCGGCATTaGTACCATCCATCCTCACTA +
Preference number: 4 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPPGRRH*YHPSSL
Trigger: TAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGG...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAATCTGAGCAGAGTGCCTaGTCACAGTTAAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKSEQSA*SQLKAF
Trigger: GAAAGCTTTTAACTGTGATCAGGCACTCTGCTCAGA...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGGCAACACCCAATGGGTTaGGCTGGAGTAAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: ASASSAVKRKLWQISLGWQHPMG*AGVRTG
Trigger: GCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTG...CCATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTGCTGGTTTAGCTCCGTaGAGAACTTTTCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFAGLAP*RTFPRP
Trigger: AGGCCTTGGAAAAGTTCTGCACGGAGCTAAACCAGC...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCGGATATCATAGTCATTaGTGTCTGGCCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVGYHSH*CLALGQ
Trigger: TTGGCCAAGGGCCAGACAGCAATGACTATGATATCC...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATAGGCACCTGCCGTGGTaGAAATACACACTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNRHLPW*KYTLRV
Trigger: AACGCGCAGTGTGTATTTGCACCACGGCAGGTGCCT...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTCTGAACTTGCGGCTATaGGACAGGTCCGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSALNLRL*DRSEGS
Trigger: GGACCCCTCGGACCTGTCCCATAGCCGCAAGTTCAG...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCATAGTCATTGCTGTCTaGCCCTTGGCCAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPIVIAV*PLAKIP
Trigger: GGGGATTTTGGCCAAGGGCCAGACAGCAATGACTAT...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGTGCGCGGGGATCAGGTaGTGGAACTTTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQCAGIR*WNFSFL
Trigger: GAGGAAAGAAAAGTTCCACCACCTGATCCCCGCGCA...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCCGAGGTCAACTTCCGTGGACACATGGATTTaGTGTCATCATCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LPPATRRDTLHDTPRSTSVDTWI*CHHRSC
Trigger: GCACGAGCGATGATGACACCAAATCCATGTGTCCAC...GGAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCTGCTGCTCAGGTCTGTaGCATCCAGAGATAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPCCSGL*HPEIKG
Trigger: GCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCA...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCAGGAACGTCATAGCCTaGTGGTCAGAAATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTRNVIA*WSEMSA
Trigger: AGCACTCATTTCTGACCACCAGGCTATGACGTTCCT...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATGCAGGATTCAGGGACTaGAGAGGTTACTATAGACAA +
Preference number: 4 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADAGFRD*RGYYRQ
Trigger: TTGTCTATAGTAACCTCTTCAGTCCCTGAATCCTGC...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCATGTTGAGCCGCTCCTaGTTCACTAGAATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPMLSRS*FTRMLL
Trigger: CAGCAACATTCTAGTGAATCAGGAGCGGCTCAACAT...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGGCACAGCTAGAAGCTTaGTGCTGTTTTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQAQLEA*CCFPGV
Trigger: CACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGC...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCTCACCACAGCCCAGTaGCCTGTGAAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQLTTAQ*PVKTFF
Trigger: AAAGAAGGTTTTCACAGGTCACTGGGCTGTGGTGAG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGGAGGAGGGAGGAGGTaGTACCACCCTGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLGGGRR*YHPERI
Trigger: AATTCTCTCAGGGTGGTATCACCTCCTCCCTCCTCC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCACTGAGCCCTGGGCGTaGAAAGCAAAAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLTEPWA*KAKGPV
Trigger: CACTGGCCCTTTTGCTTTTCACGCCCAGGGCTCAGT...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGACACCGAATCTTCCATaGCTGGCGTGTCCAAAATTA +
Preference number: 4 (lower is better)
Translates to: KRQLCPEASPHRAHSLAVTPNLP*LACPKL
Trigger: TAATTTTGGACACGCCAGGCATGGAAGATTCGGTGT...CACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCTGAAGTTACAGGCTaGGCTGAACTTGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNAEVTG*AELAAM
Trigger: CATAGCCGCAAGTTCAGCGCAGCCTGTAACTTCAGC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTTCCAGGTCCTCACTCTaGAGGCTCAGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSASRSSL*RLREVG
Trigger: CCCCACTTCCCTGAGCCTGCAGAGTGAGGACCTGGA...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AAAAGGCAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCTGTCAAGCAGTTCTTaGACAGCTAGAAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: KRQLCPEASPHRAHSLAVLSSSS*TARSLM
Trigger: CATCAAGCTTCTAGCTGTGCAAGAACTGCTTGACAG...CACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTACAGGAGGGTCAGGGCTaGCAGGTGAAGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLQEGQG*QVKVNK
Trigger: CTTGTTAACCTTCACCTGGCAGCCCTGACCCTCCTG...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGACGCAGGTTTCTGCTTTaGCCACCTGGTGGGGTACGC +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRRRFLL*PPGGVR
Trigger: GCGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCG...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAACTCCCCGCAGGTTTCTaGTTTGCCCACCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKLPAGF*FAHLVG
Trigger: CCCCACCAGGTGGGCAAAGCAGAAACCTGCGGGGAG...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTGGACAGCCAGCCCAATaGTGCTCAGGTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAGQPAQ*CSGLWH
Trigger: ATGCCACAGACCTGAGCAGCATTGGGCTGGCTGTCC...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGGGACATCCCATTTCGATaGTTCCAGAAGCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASASSAVKRKLWQISLGWDIPFR*FQKHSL
Trigger: CAGGCTGTGCTTCTGGAAGCATCGAAATGGGATGTC...CCATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCCCAGGGTGCTCCCCATaGTCCGCCAGGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFPGCSP*SARIRL
Trigger: GAGCCTGATCCTGGCGGACCATGGGGAGCACCCTGG...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCGCAGGCTCAGGGAAGTaGGGCTCGGGTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFAGSGK*GSGEAW
Trigger: CCAAGCCTCACCCGAGCCCCACTTCCCTGAGCCTGC...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTATGCAAGGCCTCAAGGTaGGGACATAAAAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLCKASR*GHKRRR
Trigger: CCTGCGCCTTTTATGTCCCCACCTTGAGGCCTTGCA...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp AGCTGCTCAGGGCTTGACCCTAGCTCCACACAGAGGCACCTGCCGTGGTGCAAATCTTTAAGCTTTTACTaGTCCAGATGTTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SCSGLDPSSTQRHLPWCKSLSFY*SRCCPE
Trigger: CTCTGGACAACATCTGGATCAGTAAAAGCTTAAAGA...TTTGCACCACGGCAGGTGCCTCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCCACTCAATGTATCTaGGCAGAGTGCCTGATCACA +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNATQCI*AECLIT
Trigger: TGTGATCAGGCACTCTGCTCAGATACATTGAGTGGC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCGAGGGACACTCTCCATaGTACCCCGAGGTCAACTTC +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLEGHSP*YPEVNF
Trigger: GAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTC...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CACAACCAACTGTCCCTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCGGTTTCACCTTTAGATaGGGCACCAGAAACGATGTG +
Preference number: 4 (lower is better)
Translates to: HNQLSLPPATRRDTLHDTGFTFR*GTRNDV
Trigger: CACATCGTTTCTGGTGCCTCATCTAAAGGTGAAACC...GGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAGGGACAGTTGGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATTACACCACTGACCAATaGCAGGTCCTCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNYTTDQ*QVLHLL
Trigger: AAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTA...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGATATTGTCTTTGTGCTaGCATCCAGTCAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQILSLC*HPVSSG
Trigger: TCCGCTGCTGACTGGATGGCAGCACAAAGACAATAT...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGTCCCGGCTCTTTCTATaGGAGAAACTTAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMSRLFL*EKLSIA
Trigger: AGCGATGCTAAGTTTCTCCCATAGAAAGAGCCGGGA...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAAAGGATGGCCTTTGGACGAATCTTCCATGCCTaGCGTGTCCAAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: QDQRCFLEPGGPKRMAFGRIFHA*RVQNYL
Trigger: AAGGTAATTTTGGACACGCCAGGCATGGAAGATTCG...TCCAAAGGCCATCCTTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTCCACTTGCGGATGTTaGGCAGGGTCGGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSASTCGC*AGSAGL
Trigger: TAAACCAGCCGACCCTGCCCAACATCCGCAAGTGGA...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTTCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSASTEKA*GKASSA
Trigger: AGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGA...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTACCAGCGATGCTTCTTaGAGCCAGGTGGCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSATSDAS*SQVAPK
Trigger: TTTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGT...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCTCTTTAAGCTTTTACTaGTCCAGATGTTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTSLSFY*SRCCPE
Trigger: CTCTGGACAACATCTGGATCAGTAAAAGCTTAAAGA...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCAAGGCCTCAAGTGCTaGTGCTCTGAGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFQGLKC*CSENKN
Trigger: ATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTG...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR GCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAAGGAAGGCCGCACCACTaGAGAAGAGCTCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKGRPHH*RRALWL
Trigger: TAGCCAGAGAGCTCTTCTGCAGTGGTGCGGCCTTCC...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR GCA 90 bp CCTGCAAAGAGAACTAAACAAATAGTGCTCCAGGCAAAAGCCAGGCTGGTGAAGTCAGCAAACACCTGGTaGCGGATCCTGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAKRTKQIVLQAKARLVKSANTW*RILSRK
Trigger: CTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGA...CTTCACCAGCCTGGCTTTTGCCTGGAGCACTATTTGTTTAGTTCTCTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTTTTCCAGGAGTGTCATaGACACCACCTCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSAFPGVS*TPPLAP
Trigger: GGGTGCGAGAGGTGGTGTGCATGACACTCCTGGAAA...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGATGCAGAAGAGCTCTCTaGCTAGGGAGGAAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRCRRAL*LGRKPS
Trigger: ACTGGGCTTCCTCCCTAGCCAGAGAGCTCTTCTGCA...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAATCCACAGAGAAGGCGTaGGGCAAGGCCTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKSTEKA*GKASSA
Trigger: AGCACTTGAGGCCTTGCCCCACGCCTTCTCTGTGGA...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAGAAATGAGTGCTTCTaGCGCTGCTGGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRRNECF*RCWTVA
Trigger: GGCCACAGTCCAGCAGCGCCAGAAGCACTCATTTCT...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp TCCTGGAAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCGCTTCCATGGGATACTaGAATAATCTAGGTAATCTA +
Preference number: 4 (lower is better)
Translates to: SWKRVPFPSPRPAMLLGAASMGY*NNLGNL
Trigger: TAGATTACCTAGATTATTCCAGTATCCCATGGAAGC...GGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CCTGCAAAGAGAACTAAACAAATAGTGCTCCAGGCAAAAGCCAGGCTGGTGAAGGGTCCTCCACCTTCTTaGAGCCACCGATATACTCTC +
Preference number: 4 (lower is better)
Translates to: PAKRTKQIVLQAKARLVKGPPPS*SHRYTL
Trigger: GAGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACC...CTTCACCAGCCTGGCTTTTGCCTGGAGCACTATTTGTTTAGTTCTCTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCAAGGCCTCAAGTGCTaGTGCTCTGAGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQQGLKC*CSENKN
Trigger: ATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCTGCTGCTCAGGTCTGTaGCATCCAGAGATAAAAGGC +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLCCSGL*HPEIKG
Trigger: GCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCA...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATAACGTCATAGCCTGGTaGTCAGAAATGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNNVIAW*SEMSAS
Trigger: AGAAGCACTCATTTCTGACCACCAGGCTATGACGTT...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR TCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAACACAGATCTCAAACTTaGCCTGCTCCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKHRSQT*PAPAWW
Trigger: CCACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTG...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp GAGAAGGCGTGGGGCAAGGCCTCAAGTGCTGATGCTCTGAGAATAAAAATTAAACCAGGAAGGCGGCATTaGTACCATCCATCCTCACTA +
Preference number: 4 (lower is better)
Translates to: EKAWGKASSADALRIKIKPGRRH*YHPSSL
Trigger: TAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGG...TTTAATTTTTATTCTCAGAGCATCAGCACTTGAGGCCTTGCCCCACGCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTGCCACTCAATGTATCTaGGCAGAGTGCCTGATCACA +
Preference number: 4 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSAATQCI*AECLIT
Trigger: TGTGATCAGGCACTCTGCTCAGATACATTGAGTGGC...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTCAGAAAAACGGAAGGTaGAGGATTCAGGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAQKNGR*RIQGLK
Trigger: CTTCAGTCCCTGAATCCTGCACCTTCCGTTTTTCTG...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTGGATATCATAGTCATTaGTGTCTGGCCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAGYHSH*CLALGQ
Trigger: TTGGCCAAGGGCCAGACAGCAATGACTATGATATCC...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CCA 90 bp CTGTGGCGGACTTGTCCCATGCTCTCACTGCAGCGAGGCAGGTTAATCTGTTTATTCTGTCCACAGCTTTaGTTGCAAAAAGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: LWRTCPMLSLQRGRLICLFCPQL*LQKAIW
Trigger: CCAGATTGCTTTTTGCAACCAAAGCTGTGGACAGAA...TAAACAGATTAACCTGCCTCGCTGCAGTGAGAGCATGGGACAAGTCCGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCGTTGATGTTAACACGTaGGGTGAGGGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFVDVNT*GEGHSC
Trigger: ACAGCTGTGCCCCTCACCCCACGTGTTAACATCAAC...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR TCA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGACAGCCCAGTGACCTGTaGAAACCTTCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRQPSDL*KPSLSF
Trigger: AAAGCTTAAAGAAGGTTTTCACAGGTCACTGGGCTG...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR TCA 90 bp GCTCAAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCCAGAATGGACACAATTaGTTCCCAAGTACCCTTAGA +
Preference number: 4 (lower is better)
Translates to: AQARLRTQRSSDWISCPLQNGHN*FPSTLR
Trigger: TCTAAGGGTACTTGGGAATCAATTGTGTCCATTCTG...GAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CCTGCAAAGAGAACTAAACAAATAGTGCTCCAGGCAAAAGCCAGGCTGGTGAAGTGTCATCATCGCTCGTaGTTGATGTTGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: PAKRTKQIVLQAKARLVKCHHRS*LMLASL
Trigger: AAGTGAAGCCAACATCAAGCACGAGCGATGATGACA...CTTCACCAGCCTGGCTTTTGCCTGGAGCACTATTTGTTTAGTTCTCTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCATAGTCATTGCTGTCTaGCCCTTGGCCAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFIVIAV*PLAKIP
Trigger: GGGGATTTTGGCCAAGGGCCAGACAGCAATGACTAT...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
3UTR CAA 72 bp CTCAGCTCACTTAAGGAGGCTTTTCTGTCCACAGCTTaGGTTGCAAAAAGCAATCTGGCTAAAGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LSSLKEAFLSTA*VAKSNLAKGIW
Trigger: CCAAATCCCTTTAGCCAGATTGCTTTTTGCAACCAAAGCTGTGGACAGAAAAGCCTCCTTAAGTGAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR GCA 90 bp CCTGCAAAGAGAACTAAACAAATAGTGCTCCAGGCAAAAGCCAGGCTGGTGAAGTCAGTTGTAACAAAGTaGCATGCTAATGCAACATGC +
Preference number: 4 (lower is better)
Translates to: PAKRTKQIVLQAKARLVKSVVTK*HANATC
Trigger: GCATGTTGCATTAGCATGGCACTTTGTTACAACTGA...CTTCACCAGCCTGGCTTTTGCCTGGAGCACTATTTGTTTAGTTCTCTTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CCA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCAACGTCATAGCCTGGTaGTCAGAAATGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFNVIAW*SEMSAS
Trigger: AGAAGCACTCATTTCTGACCACCAGGCTATGACGTT...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS TCA 90 bp GCTCTGCGGGGCGCCGGTTCCTCTTCCACCTGCGGCTCGGAAGCCTaGGCCCAGCCCGGGACAGCACGGGCCCCCTGCCTCCAGCCTAGG +
Preference number: 5 (lower is better)
Translates to: ALRGAGSSSTCGSEA*AQPGTARAPCLQPR
Trigger: CCTAGGCTGGAGGCAGGGGGCCCGTGCTGTCCCGGGCTGGGCTCAGGCTTCCGAGCCGCAGGTGGAAGAGGAACCGGCGCCCCGCAGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 90 bp GGGCCCCCTGCCTCCAGCCTAGGCGTCCGCGCGGGTGTGGGTCACTaGTCAGGCCCTGGAAGCCGACTACGCCGCTTCGGTCTGCGTGTC +
Preference number: 5 (lower is better)
Translates to: GPPASSLGVRAGVGH*SGPGSRLRRFGLRV
Trigger: GACACGCAGACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGACCCACACCCGCGCGGACGCCTAGGCTGGAGGCAGGGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 90 bp CTCCAGCCTAGGCGTCCGCGCGGGTGTGGGTCACTGGTCAGGCCCTaGAAGCCGACTACGCCGCTTCGGTCTGCGTGTCCCGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LQPRRPRGCGSLVRP*KPTTPLRSACPGSF
Trigger: GAAAGAGCCGGGACACGCAGACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGACCCACACCCGCGCGGACGCCTAGGCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGCGCACCCCGGGGTTGTaGGCCTTCTCCACGGAACAG +
Preference number: 5 (lower is better)
Translates to: SALPTWWGTRLARHPHWRRTPGL*AFSTEQ
Trigger: CTGTTCCGTGGAGAAGGCCAACAACCCCGGGGTGCG...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 90 bp ACCTCCCGAGGTATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTTaGTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: TSRGMGWGPPASRAR*LASSPVNPRLSAPC
Trigger: GCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS GCA 90 bp ACCTTGAACCTCCCGAGGTATGGGCTGGGGCCCGCCAGCTTCCCGTaGCCGTTGCTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: TLNLPRYGLGPASFP*PLLGELSCEPASLS
Trigger: GCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTTCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS-3UTR CAA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCGGGGCCCCTTCCACTaGCGGATGTTGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSRGPFH*RMLGRV
Trigger: GACCCTGCCCAACATCCGCAAGTGGAAGGGGCCCCG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTCGAGCTGATGGGGCCTaGAGAGGCGCCTCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTRADGA*RGASAR
Trigger: CCTTGCAGAGGCGCCTCTCAAGGCCCCATCAGCTCG...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS GCA 90 bp TCCCCATGGTCCGCCAGGATCAGGCTCCCGGGAAGGCCGCACCACTaGAGAAGAGCTCTCTGGCTAGGGAGGAAGCCCAGTAGGCCGTAC +
Preference number: 5 (lower is better)
Translates to: SPWSARIRLPGRPHH*RRALWLGRKPSRPY
Trigger: GTACGGCCTACTGGGCTTCCTCCCTAGCCAGAGAGCTCTTCTGCAGTGGTGCGGCCTTCCCGGGAGCCTGATCCTGGCGGACCATGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGGCGGCGCCGCCGCAGTaGCGTTTACCCCGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRAAPPQ*RLPRQK
Trigger: TTTTTGCCGGGGTAAACGCAACTGCGGCGGCGCCGC...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTCGCACCCCGGGGTTGTaGGCCTTCTCCACGGAACAG +
Preference number: 5 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGRTPGL*AFSTEQ
Trigger: CTGTTCCGTGGAGAAGGCCAACAACCCCGGGGTGCG...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCTCTCGCACCCCGGGGTaGTTGGCCTTCTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSSRTPG*LAFSTE
Trigger: TTCCGTGGAGAAGGCCAACAACCCCGGGGTGCGAGA...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 90 bp GTGAGGCTTGGCGGTGAAGGTCAGTCCCCCGTTCGTGTGGGTGGATaGGGGCCTGGACCTCTCAGCAAACACCTGGTGCCGGATCCTGTC +
Preference number: 5 (lower is better)
Translates to: VRLGGEGQSPVRVGG*GPGPLSKHLVPDPV
Trigger: GACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAACGGGGGACTGACCTTCACCGCCAAGCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCAGGGCTGTGGCGGACTaGTCCCATGCTCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSRAVAD*SHALTA
Trigger: TGCAGTGAGAGCATGGGACAAGTCCGCCACAGCCCT...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCGAAATCCCTCCTGGCTaGGGCTCGGGGATGCAGATG +
Preference number: 5 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSEIPPG*GSGMQM
Trigger: CATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTC...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS GCA 90 bp GGCTGCTGCTCCGCTAGCAGGTCCCGCCGCAGGGAACTGGGAGAGTaGTGCGCTGAGCTGCCCTTGCTGCTCACACAGATCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: GCCSASRSRRRELGE*CAELPLLLTQISNL
Trigger: CAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCTGCTAGCGGAGCAGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 90 bp CGTTGCTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCTCCATaGCGGCAGCCGCGTCCCATAGGAATCCTGCATACCCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RCLASSPVNPRLSAP*RQPRPIGILHTQLP
Trigger: AGGGAGCTGGGTATGCAGGATTCCTATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CCA 90 bp CGGGGTTGTTGGCCTTCTCCACGGAACAGCCCTGCAAGTTCCAGGTaGCCAGCCTCAGCACAGGCCTCCCATCCCTTGTGCCTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: RGCWPSPRNSPASSR*PASAQASHPLCLQR
Trigger: CCTTTGGAGGCACAAGGGATGGGAGGCCTGTGCTGAGGCTGGCCACCTGGAACTTGCAGGGCTGTTCCGTGGAGAAGGCCAACAACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GTGCTTCTGGCGCTGCTGGACTGTGGCCCGCAGCCTGAGCACCCCTTCTTCTCCTGCGCTGAGCTGCCCTaGCTGCTCACACAGATCTCA +
Preference number: 5 (lower is better)
Translates to: VLLALLDCGPQPEHPFFSCAELP*LLTQIS
Trigger: TGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCA...GGAGAAGAAGGGGTGCTCAGGCTGCGGGCCACAGTCCAGCAGCGCCAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp ACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACAGCCGGGGTGGCTGTGTaGATGTTAACACGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: TPQGSFLGCALLGPRVDTAGVAV*MLTRGV
Trigger: CACCCCACGTGTTAACATCAACACAGCCACCCCGGC...TGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTTCCAGGAAGGCGGCATaGATACCATCCATCCTCACT +
Preference number: 5 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGSRKAA*IPSILT
Trigger: AGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGA...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGGGTGGACACATGGATTaGGTGTCATCATCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: SALPTWWGTRLARHPHWRGGHMD*VSSSLV
Trigger: CACGAGCGATGATGACACCAAATCCATGTGTCCACC...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS GCA 90 bp TGCTGCTCCGCTAGCAGGTCCCGCCGCAGGGAACTGGGAGAGTGCTaGGCTGAGCTGCCCTTGCTGCTCACACAGATCTCAAACTTGACC +
Preference number: 5 (lower is better)
Translates to: CCSASRSRRRELGEC*AELPLLLTQISNLT
Trigger: GGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCTGCTAGCGGAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCAAAATTACCTTTCACTaGGCCGCCTCTCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGKITFH*AASRPL
Trigger: GAGCGGCCGAGAGGCGGCCAAGTGAAAGGTAATTTT...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGAGGTCCTCCACCTTCTaGAAGCCACCGATATACTCT +
Preference number: 5 (lower is better)
Translates to: SALPTWWGTRLARHPHWRRSSTF*KPPIYS
Trigger: AGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACCT...CCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGTCTCGCACCCCGGGGTaGTTGGCCTTCTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWSRTPG*LAFSTE
Trigger: TTCCGTGGAGAAGGCCAACAACCCCGGGGTGCGAGA...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCCGAGGGGCATCCTTCTaGCTCCAGTCCTTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGRGASF*LQSFSV
Trigger: CACTGAAAAGGACTGGAGCAAGAAGGATGCCCCTCG...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGTGGGGCCGCTCGTGCTTGATGTaGGCTTCACTTCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: WHATPTGGPEWSTEKAWGRSCLM*ASLRSK
Trigger: CTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCG...GCCCCACGCCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CCA 90 bp CCGTTCGTGTGGGTGGATGGGGGCCTGGACCTCTCAGCAAACACCTaGTGCCGGATCCTGTCCAGGAAGGCGGCATTGATACCATCCATC +
Preference number: 5 (lower is better)
Translates to: PFVWVDGGLDLSANT*CRILSRKAALIPSI
Trigger: GATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCGCGGCGCCGCCGCAGTaGCGTTTACCCCGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCAAPPQ*RLPRQK
Trigger: TTTTTGCCGGGGTAAACGCAACTGCGGCGGCGCCGC...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCCAGGCTGCGCTGAACTaGCGGCTATGGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVQAALN*RLWDRS
Trigger: GGACCTGTCCCATAGCCGCAAGTTCAGCGCAGCCTG...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AAGAGGGTTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGTTGACCTGCTCCAGCTaGGTGGCGCCTACACCACTG +
Preference number: 5 (lower is better)
Translates to: KRVPFPSPRPAMLLGARWLTCSS*VAPTPL
Trigger: CAGTGGTGTAGGCGCCACCAAGCTGGAGCAGGTCAA...CCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAACCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCGGGGCCCCTTCCACTaGCGGATGTTGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQRGPFH*RMLGRV
Trigger: GACCCTGCCCAACATCCGCAAGTGGAAGGGGCCCCG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTTTACTGATCCAGATGTaGTCCAGAGACTTCGAGCCT +
Preference number: 5 (lower is better)
Translates to: LLCPPGGVRAWHATPTGGLLIQM*SRDFEP
Trigger: AGGCTCGAAGTCTCTGGACAACATCTGGATCAGTAA...ACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGCGCTCGTGCTTGATGTaGGCTTCACTTCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRRSCLM*ASLRSK
Trigger: CTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCG...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVHRAHS*AVPSWV
Trigger: GACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTG...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp GCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCCTGAGCTGCCCCTCTaGACTTTAATGCTAACCCTG +
Preference number: 5 (lower is better)
Translates to: ALKRHPTGLIPWLCPPGSPELPL*TLMLTL
Trigger: CAGGGTTAGCATTAAAGTCAAGAGGGGCAGCTCAGG...GGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS GCA 90 bp TGGGTCACTGGTCAGGCCCTGGAAGCCGACTACGCCGCTTCGGTCTaGGTGTCCCGGCTCTTTCTATGGGAGAAACTTAGCATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: WVTGQALEADYAASV*VSRLFLWEKLSIAL
Trigger: GAGAGCGATGCTAAGTTTCTCCCATAGAAAGAGCCGGGACACGCAGACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 90 bp TTCGTGTGGGTGGATGGGGGCCTGGACCTCTCAGCAAACACCTGGTaGCGGATCCTGTCCAGGAAGGCGGCATTGATACCATCCATCCTC +
Preference number: 5 (lower is better)
Translates to: FVWVDGGLDLSANTW*RILSRKAALIPSIL
Trigger: GAGGATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 90 bp CTGGGTCCCAGGGTGGACACATGGATTTGGTGTCATCATCGCTCGTaGTTGATGTTGGCTTCACTTCGCTCCAAGGCCACCCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LGPRVDTWIWCHHRS*LMLASLRSKATPLP
Trigger: CGGCAGCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS GCA 90 bp AGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTaGCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCATCA +
Preference number: 5 (lower is better)
Translates to: SSALKRHPTGLIPWL*PPGSQGGHMDLVSS
Trigger: TGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCCAGGCTGCGCTGAACTaGCGGCTATGGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPQAALN*RLWDRS
Trigger: GGACCTGTCCCATAGCCGCAAGTTCAGCGCAGCCTG...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTTCCCGTGCCCGTTGCTaGGCGAGCTCTCCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFSRARC*ASSPVN
Trigger: GTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGA...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCAGCTTCCCGTGCCCGTaGCTTGGCGAGCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCSFPCP*LGELSC
Trigger: ACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCT...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CAGCTCTGCCCTGAAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCCAGAGACTTCGAGCCTaGAGGGTTCTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: QLCPEASPHRAHSLAVPSQRLRA*RVLGAD
Trigger: ATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCTG...GGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTTCAGGGCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCCGCAGGTTTCTGCTTaGCCCACCTGGTGGGGTACG +
Preference number: 5 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFPQVSA*PTWWGT
Trigger: CGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCGG...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCGCAGGTTTCTGCTTaGCCCACCTGGTGGGGTACG +
Preference number: 5 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCPQVSA*PTWWGT
Trigger: CGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCGG...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp AGGTTTCTGCTTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTCTCCCTCTGCTCATATaGTCTTTGTGCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: RFLLCPPGGVRAWHATPTLPLLI*SLCCHP
Trigger: TGGATGGCAGCACAAAGACAATATGAGCAGAGGGAG...AGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAAGCAGAAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TTTGCCCACCTGGTGGGGTACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGTGTCCACAGCTTTGGTaGCAAAAAGCAATCTGGCTA +
Preference number: 5 (lower is better)
Translates to: FAHLVGYAPGTPPPLEVLCPQLW*QKAIWL
Trigger: TAGCCAGATTGCTTTTTGCAACCAAAGCTGTGGACA...CAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTACCCCACCAGGTGGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS TCA 90 bp GTCCCAGGGTGGACACATGGATTTGGTGTCATCATCGCTCGTGCTTaGTGTTGGCTTCACTTCGCTCCAAGGCCACCCCGCTGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VPGWTHGFGVIIARA*CWLHFAPRPPRCRS
Trigger: GGAACGGCAGCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGTCCCGTGCCCGTTGCTaGGCGAGCTCTCCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQSRARC*ASSPVN
Trigger: GTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGA...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGAGCTTCCCGTGCCCGTaGCTTGGCGAGCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQSFPCP*LGELSC
Trigger: ACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCT...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGGCCGCAGGTTTCTGCTTaGCCCACCTGGTGGGGTACG +
Preference number: 5 (lower is better)
Translates to: ASASSAVKRKLWQISLGWPQVSA*PTWWGT
Trigger: CGTACCCCACCAGGTGGGCAAAGCAGAAACCTGCGG...CCATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp AAGCGTCACCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTCTGCTCATATTGTCTTaGTGCTGCCATCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: KRHPTGLIPWLCPPGSQGLLILS*CCHPVS
Trigger: GCTGACTGGATGGCAGCACAAAGACAATATGAGCAG...ACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGGTGACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp GGGATGGTGTTGCCTAAGGGAAATCCCTCCTGGCTTGGGCTCGGGGATGCAGATGAAGCTGCTCAGGGCTaGACCCTAGCTCCACACAGA +
Preference number: 5 (lower is better)
Translates to: GMVLPKGNPSWLGLGDADEAAQG*TLAPHR
Trigger: TCTGTGTGGAGCTAGGGTCAAGCCCTGAGCAGCTTC...ATCTGCATCCCCGAGCCCAAGCCAGGAGGGATTTCCCTTAGGCAACACCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS TCA 90 bp TCTCAGCAAACACCTGGTGCCGGATCCTGTCCAGGAAGGCGGCATTaGTACCATCCATCCTCACTAGGTCCTCAACGCTGCGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: SQQTPGAGSCPGRRH*YHPSSLGPQRCERA
Trigger: GGCCCTTTCGCAGCGTTGAGGACCTAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 90 bp ATACCATCCATCCTCACTAGGTCCTCAACGCTGCGAAAGGGCCCATaGTCACGGCGGAAGTCCACGATGCTGAGGGCCATTTTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: IPSILTRSSTLRKGP*SRRKSTMLRAIFSE
Trigger: CTCGGAGAAAATGGCCCTCAGCATCGTGGACTTCCGCCGTGAGCATGGGCCCTTTCGCAGCGTTGAGGACCTAGTGAGGATGGATGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CCCCACAGGGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATTGCACAGCTAGAAGCTaGATGCTGTTTTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PHRAHSLAVPSWVPGWTHCTARS*MLFSRS
Trigger: ACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGCA...ATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCTTCCACTTGCGGATGTaGGGCAGGGTCGGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPFHLRM*GRVGWF
Trigger: AAACCAGCCGACCCTGCCCAACATCCGCAAGTGGAA...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TACGCGCCTGGCACGCCACCCCCACTGGAGGTCCTGAATGGTCCACAGAGAAGGTTACTGATCCAGATGTaGTCCAGAGACTTCGAGCCT +
Preference number: 5 (lower is better)
Translates to: YAPGTPPPLEVLNGPQRRLLIQM*SRDFEP
Trigger: AGGCTCGAAGTCTCTGGACAACATCTGGATCAGTAA...CCTTCTCTGTGGACCATTCAGGACCTCCAGTGGGGGTGGCGTGCCAGGCGCGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTGTCCGCTCGTGCTTGATGTaGGCTTCACTTCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HSLAVPSWVPGWTHGFGVRSCLM*ASLRSK
Trigger: CTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCG...GACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TTCCCTTCCCGTCCCCAAGACCAGCGATGCTTCTTGGAGCCAGGTGGCCCCAAACATCATCGCTCGTGCTaGATGTTGGCTTCACTTCGC +
Preference number: 5 (lower is better)
Translates to: FPSRPQDQRCFLEPGGPKHHRSC*MLASLR
Trigger: GCGAAGTGAAGCCAACATCAAGCACGAGCGATGATG...TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTCTTGGGGACGGGAAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp AGCCTCAGCGTCTTCAGCTGTGAAACGCAAATTGTGGCAGATCTCCCTGGGATGCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLSVFSCETQIVADLPGMHRAHS*AVPSWV
Trigger: GACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTG...CATCCCAGGGAGATCTGCCACAATTTGCGTTTCACAGCTGAAGACGCTGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp CTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCCGAGGTCAACTTCCCTCCCTGGGATGGTGTaGCCTAAGGGAAATCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPPATRRDTLHDTPRSTSLPGMV*PKGNPS
Trigger: GGAGGGATTTCCCTTAGGCAACACCATCCCAGGGAG...GGAAGTTGACCTCGGGGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS CCA 90 bp TTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTaGTGTCATCATCGCTCGTGCTTGATGTTGGCTTCACTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: FLGCALLGPRVDTWI*CHHRSCLMLASLRS
Trigger: GGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATTTGACCTGCTCCAGCTaGGTGGCGCCTACACCACTG +
Preference number: 5 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNLTCSS*VAPTPL
Trigger: CAGTGGTGTAGGCGCCACCAAGCTGGAGCAGGTCAA...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTGGTTCCAGGAAGGCGGCATaGATACCATCCATCCTCACT +
Preference number: 5 (lower is better)
Translates to: AHSLAVPSWVPGWTHGFGSRKAA*IPSILT
Trigger: AGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGA...ACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CCAACACCCAATGGGTTGAGCTGGAGTAAGAACAGGCTGCCCAGCACACTTCCTTTCCACTTGCGGATGTaGGGCAGGGTCGGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: PTPNGLSWSKNRLPSTLPFHLRM*GRVGWF
Trigger: AAACCAGCCGACCCTGCCCAACATCCGCAAGTGGAA...AGGAAGTGTGCTGGGCAGCCTGTTCTTACTCCAGCTCAACCCATTGGGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS CCA 90 bp GGCTCATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATaGATTTGGTGTCATCATCGCTCGTGCTTGATGTTGGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: GSFLGCALLGPRVDT*IWCHHRSCLMLASL
Trigger: AAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAATGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CACAACCAACTGTCCCTACCTCCAGCCACTAGGAGGGACACTCTCCATGATACCCGAGGGGCATCCTTCTaGCTCCAGTCCTTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: HNQLSLPPATRRDTLHDTRGASF*LQSFSV
Trigger: CACTGAAAAGGACTGGAGCAAGAAGGATGCCCCTCG...GGTATCATGGAGAGTGTCCCTCCTAGTGGCTGGAGGTAGGGACAGTTGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTCACAGGGCTCATTCCTaGGCTGTGCCCTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAHRAHS*AVPSWV
Trigger: GACCCAGGAGGGCACAGCCAAGGAATGAGCCCTGTG...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp GCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCCACCCTGCTCATATTGTCTTaGTGCTGCCATCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: ASRDKRRLRSPQVSALPTLLILS*CCHPVS
Trigger: GCTGACTGGATGGCAGCACAAAGACAATATGAGCAG...GGTGGGCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TCTGCATCCCTCTATTTACCCAGTGGTGTGACCTTGAGGAGGTCGAGCTCTCTAGACCAGCGATGCTTCTaGGAGCCAGGTGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SASLYLPSGVTLRRSSSLDQRCF*EPGGPK
Trigger: TTTGGGGCCACCTGGCTCCAAGAAGCATCGCTGGTC...TAGAGAGCTCGACCTCCTCAAGGTCACACCACTGGGTAAATAGAGGGATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp CTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAGGTCCTCCACCTTCTaGAAGCCACCGATATACTCT +
Preference number: 5 (lower is better)
Translates to: LCSYCLCAAIQSAADSQPRSSTF*KPPIYS
Trigger: AGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACCT...GGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCAGAGACTTCGAGCCTaGAGGGTTCTTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQQRLRA*RVLGAD
Trigger: ATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCTG...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp GCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGCATCATCGCTCGTGCTaGATGTTGGCTTCACTTCGC +
Preference number: 5 (lower is better)
Translates to: AHIVFVLPSSQQRTASPMHHRSC*MLASLR
Trigger: GCGAAGTGAAGCCAACATCAAGCACGAGCGATGATG...CATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTGCTTTGCCTGCTCATATTGTCTTaGTGCTGCCATCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LWHPEIKGVSAPRRFLLCLLILS*CCHPVS
Trigger: GCTGACTGGATGGCAGCACAAAGACAATATGAGCAG...GCAAAGCAGAAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp TGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCGCTCCCCGCAGGTTTCTCCCTCTGCTCATATaGTCTTTGTGCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: CSGLWHPEIKGVSAPRRFLPLLI*SLCCHP
Trigger: TGGATGGCAGCACAAAGACAATATGAGCAGAGGGAG...AAACCTGCGGGGAGCGGAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTTGCGCTGAGCTGCCCTaGCTGCTCACACAGATCTCA +
Preference number: 5 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSACAELP*LLTQIS
Trigger: TGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCA...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTGCCGGGGTGGCTGTGTaGATGTTAACACGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSAAGVAV*MLTRGV
Trigger: CACCCCACGTGTTAACATCAACACAGCCACCCCGGC...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp TGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGCCCAATGGTGGACACATGGATTaGGTGTCATCATCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: CSYCLCAAIQSAADSQPNGGHMD*VSSSLV
Trigger: CACGAGCGATGATGACACCAAATCCATGTGTCCACC...ATTGGGCTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS-3UTR CAA 90 bp ACAGCCAGCCCAATGCTGCTCAGGTCTGTGGCATCCAGAGATAAAAGGCGTCTCCTCCCTCTGCTCATATaGTCTTTGTGCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: TASPMLLRSVASRDKRRLLPLLI*SLCCHP
Trigger: TGGATGGCAGCACAAAGACAATATGAGCAGAGGGAG...GAGACGCCTTTTATCTCTGGATGCCACAGACCTGAGCAGCATTGGGCTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS TCA 90 bp GTCATCAGCTCCTCCTCCGTGGCAGTGTTGATGTTGAGCCGCTCCTaGTTCACTAGAATGTTGCTGAAGTTACAGGCTGCGCTGAACTTG +
Preference number: 5 (lower is better)
Translates to: VISSSSVAVLMLSRS*FTRMLLKLQAALNL
Trigger: CAAGTTCAGCGCAGCCTGTAACTTCAGCAACATTCTAGTGAATCAGGAGCGGCTCAACATCAACACTGCCACGGAGGAGGAGCTGATGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 90 bp GGGACTGAAGAGGTTACTATAGACAAACACCGAATCTTCCATGCCTaGCGTGTCCAAAATTACCTTTCACTTGGCCGCCTCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: GTEEVTIDKHRIFHA*RVQNYLSLGRLSAA
Trigger: AGCGGCCGAGAGGCGGCCAAGTGAAAGGTAATTTTGGACACGCCAGGCATGGAAGATTCGGTGTTTGTCTATAGTAACCTCTTCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp TCCCTCTGCTCATATTGTCTTTGTGCTGCCATCCAGTCAGCAGCGGACAGCCAGTGCACAGCTAGAAGCTaGATGCTGTTTTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: SLCSYCLCAAIQSAADSQCTARS*MLFSRS
Trigger: ACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGCA...CTGGCTGTCCGCTGCTGACTGGATGGCAGCACAAAGACAATATGAGCAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp CTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAAATGAGTGCTCATCATCGCTCGTGCTaGATGTTGGCTTCACTTCGC +
Preference number: 5 (lower is better)
Translates to: LSVMRSRNVIAWWSEMSAHHRSC*MLASLR
Trigger: GCGAAGTGAAGCCAACATCAAGCACGAGCGATGATG...AGCACTCATTTCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS TCA 90 bp AGGCCGTACAAGCACAGAAAAACGGAAGGTGCAGGATTCAGGGACTaGAGAGGTTACTATAGACAAACACCGAATCTTCCATGCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RPYKHRKTEGAGFRD*RGYYRQTPNLPCLA
Trigger: CGCCAGGCATGGAAGATTCGGTGTTTGTCTATAGTAACCTCTTCAGTCCCTGAATCCTGCACCTTCCGTTTTTCTGTGCTTGTACGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS GCA 90 bp AGCTCCGTGCAGAACTTTTCCAAGGCCTCTCTGTCAAGCAGTTCTTaGACAGCTAGAAGCTTGATGCTGTTTTCCAGGAGTGTCATGCAC +
Preference number: 5 (lower is better)
Translates to: SSVQNFSKASLSSSS*TARSLMLFSRSVMH
Trigger: GTGCATGACACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGCAAGAACTGCTTGACAGAGAGGCCTTGGAAAAGTTCTGCACGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp AAGCCCGATTACGAACACAAAGGTCATCTGATTGGATTTCCTGTCCCCTCAGCTGGTGGACACATGGATTaGGTGTCATCATCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: KPDYEHKGHLIGFPVPSAGGHMD*VSSSLV
Trigger: CACGAGCGATGATGACACCAAATCCATGTGTCCACC...AGCTGAGGGGACAGGAAATCCAATCAGATGACCTTTGTGTTCGTAATCGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS-3UTR CAA 90 bp CAGTTAAAAGCTTTCTGTAATGCGCAGCAGGAACGTCATAGCCTGGTGGTCAGAACACAGATCTCAAACTaGACCTGCTCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QLKAFCNAQQERHSLVVRTQISN*TCSSLV
Trigger: CACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGT...TCTGACCACCAGGCTATGACGTTCCTGCTGCGCATTACAGAAAGCTTTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS-3UTR CAA 90 bp TTGACTTTAATGCTAACCCTGCTGCTTTTCCTCAAGGCTCAGACATCCCATTTCACACAGATCTCAAACTaGACCTGCTCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LTLMLTLLLFLKAQTSHFTQISN*TCSSLV
Trigger: CACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGT...GAAATGGGATGTCTGAGCCTTGAGGAAAAGCAGCAGGGTTAGCATTAAAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS CAA 72 bp CGGCGGCGAAACCCGCCGCCGAGGCTGCACCGGGGCTaGCGGCGGCGCCGCCGCAGTTGCGTTTACCCCGGC +
Preference number: 6 (lower is better)
Translates to: RRRNPPPRLHRG*RRRRRSCVYPG
Trigger: GCCGGGGTAAACGCAACTGCGGCGGCGCCGCCGCAAGCCCCGGTGCAGCCTCGGCGGCGGGTTTCGCCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp GGCGGCGAAACCCGCCGCCGAGGCTGCACCGGGGCTTaGGGCGGCGCCGCCGCAGTTGCGTTTACCCCGGCA +
Preference number: 6 (lower is better)
Translates to: GGETRRRGCTGA*GGAAAVAFTPA
Trigger: TGCCGGGGTAAACGCAACTGCGGCGGCGCCGCCGCAAGCCCCGGTGCAGCCTCGGCGGCGGGTTTCGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp GGCGCCGGTTCCTCTTCCACCTGCGGCTCGGAAGCCTaGGCCCAGCCCGGGACAGCACGGGCCCCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GAGSSSTCGSEA*AQPGTARAPCL
Trigger: GAGGCAGGGGGCCCGTGCTGTCCCGGGCTGGGCTCAGGCTTCCGAGCCGCAGGTGGAAGAGGAACCGGCGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp TGGGGATGGAGCGGTGGCAGCCCAGGGTGCTCCCCATaGTCCGCCAGGATCAGGCTCCCGGGAAGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: WGWSGGSPGCSP*SARIRLPGRPH
Trigger: GTGCGGCCTTCCCGGGAGCCTGATCCTGGCGGACCATGGGGAGCACCCTGGGCTGCCACCGCTCCATCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp CTCCCGAGGTATGGGCTGGGGCCCGCCAGCTTCCCGTaGCCGTTGCTTGGCGAGCTCTCCTGTGAACCCGCG +
Preference number: 6 (lower is better)
Translates to: LPRYGLGPASFP*PLLGELSCEPA
Trigger: CGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CCA 72 bp AGGCGTCCGCGCGGGTGTGGGTCACTGGTCAGGCCCTaGAAGCCGACTACGCCGCTTCGGTCTGCGTGTCCC +
Preference number: 6 (lower is better)
Translates to: RRPRGCGSLVRP*KPTTPLRSACP
Trigger: GGGACACGCAGACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGACCCACACCCGCGCGGACGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp GCCTCCAGCCTAGGCGTCCGCGCGGGTGTGGGTCACTaGTCAGGCCCTGGAAGCCGACTACGCCGCTTCGGT +
Preference number: 6 (lower is better)
Translates to: ASSLGVRAGVGH*SGPGSRLRRFG
Trigger: ACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACCAGTGACCCACACCCGCGCGGACGCCTAGGCTGGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 90 bp TCCCGAGGTATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTTGCTaGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCTCCATGCCGG +
Preference number: 6 (lower is better)
Translates to: SRGMGWGPPASRARC*ASSPVNPRLSAPCR
Trigger: CCGGCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS TCA 72 bp GGCTCAGGGAAGTGGGGCTCGGGTGAGGCTTGGCGGTaGAGGTCAGTCCCCCGTTCGTGTGGGTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: GSGKWGSGEAWR*RSVPRSCGWMG
Trigger: CCCCATCCACCCACACGAACGGGGGACTGACCTTCACCGCCAAGCCTCACCCGAGCCCCACTTCCCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp GGTATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTTaGTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: GMGWGPPASRAR*LASSPVNPRLS
Trigger: TGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CCA 72 bp GCTGCTGCTCCGCTAGCAGGTCCCGCCGCAGGGAACTaGGAGAGTGCTGCGCTGAGCTGCCCTTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: AAAPLAGPAAGN*ESAALSCPCCS
Trigger: TGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCTGCTAGCGGAGCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 72 bp ATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTTGCTaGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: MGWGPPASRARC*ASSPVNPRLSA
Trigger: AGCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CAA 72 bp AGGTATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTaGCTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RYGLGPASFPCP*LGELSCEPASL
Trigger: GAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CAA 90 bp AACCTCCCGAGGTATGGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTaGCTTGGCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: NLPRYGLGPASFPCP*LGELSCEPASLSSM
Trigger: CATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CCA 72 bp GGCGGTGAAGGTCAGTCCCCCGTTCGTGTGGGTGGATaGGGGCCTGGACCTCTCAGCAAACACCTGGTGCCG +
Preference number: 6 (lower is better)
Translates to: GGEGQSPVRVGG*GPGPLSKHLVP
Trigger: CGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAACGGGGGACTGACCTTCACCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp CAGGTCGTGACTTCCCACCTTGAACCTCCCGAGGTATaGGCTGGGGCCCGCCAGCTTCCCGTGCCCGTTGCT +
Preference number: 6 (lower is better)
Translates to: QVVTSHLEPPEV*AGARQLPVPVA
Trigger: AGCAACGGGCACGGGAAGCTGGCGGGCCCCAGCCCATACCTCGGGAGGTTCAAGGTGGGAAGTCACGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS GCA 72 bp TCCGCCAGGATCAGGCTCCCGGGAAGGCCGCACCACTaGAGAAGAGCTCTCTGGCTAGGGAGGAAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SARIRLPGRPHH*RRALWLGRKPS
Trigger: ACTGGGCTTCCTCCCTAGCCAGAGAGCTCTTCTGCAGTGGTGCGGCCTTCCCGGGAGCCTGATCCTGGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp TCCGCTAGCAGGTCCCGCCGCAGGGAACTGGGAGAGTaGTGCGCTGAGCTGCCCTTGCTGCTCACACAGATC +
Preference number: 6 (lower is better)
Translates to: SASRSRRRELGE*CAELPLLLTQI
Trigger: GATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCTGCTAGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp GCGAGCTCTCCTGTGAACCCGCGTCTCTCAGCTCCATaGCGGCAGCCGCGTCCCATAGGAATCCTGCATACC +
Preference number: 6 (lower is better)
Translates to: ASSPVNPRLSAP*RQPRPIGILHT
Trigger: GGTATGCAGGATTCCTATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000487069.5
ENST00000534978.1
CDS CCA 72 bp AGGTCAGTCCCCCGTTCGTGTGGGTGGATGGGGGCCTaGACCTCTCAGCAAACACCTGGTGCCGGATCCTGT +
Preference number: 6 (lower is better)
Translates to: RSVPRSCGWMGA*TSQQTPGAGSC
Trigger: ACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCACACGAACGGGGGACTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp TGGCCTTCTCCACGGAACAGCCCTGCAAGTTCCAGGTaGCCAGCCTCAGCACAGGCCTCCCATCCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: WPSPRNSPASSR*PASAQASHPLC
Trigger: GCACAAGGGATGGGAGGCCTGTGCTGAGGCTGGCCACCTGGAACTTGCAGGGCTGTTCCGTGGAGAAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp GAAAGGGCCCATGCTCACGGCGGAAGTCCACGATGCTaGGGGCCATTTTCTCCGAGAGGCCTCGCACGCTCA +
Preference number: 6 (lower is better)
Translates to: ERAHAHGGSPRC*GPFSPRGLARS
Trigger: TGAGCGTGCGAGGCCTCTCGGAGAAAATGGCCCTCAGCATCGTGGACTTCCGCCGTGAGCATGGGCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp TTGCTGAAGTTACAGGCTGCGCTGAACTTGCGGCTATaGGACAGGTCCGAGGGGTCCCTGGGGATGGAGCGG +
Preference number: 6 (lower is better)
Translates to: LLKLQAALNLRL*DRSEGSLGMER
Trigger: CCGCTCCATCCCCAGGGACCCCTCGGACCTGTCCCATAGCCGCAAGTTCAGCGCAGCCTGTAACTTCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 90 bp AGGTCCCGCCGCAGGGAACTGGGAGAGTGCTGCGCTGAGCTGCCCTaGCTGCTCACACAGATCTCAAACTTGACCTGCTCCAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RSRRRELGECCAELP*LLTQISNLTCSSLV
Trigger: CACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp CAGGTCCCGCCGCAGGGAACTGGGAGAGTGCTGCGCTaGGCTGCCCTTGCTGCTCACACAGATCTCAAACTT +
Preference number: 6 (lower is better)
Translates to: QVPPQGTGRVLR*AALAAHTDLKL
Trigger: AAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCGGCGGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp GGTCAGGCCCTGGAAGCCGACTACGCCGCTTCGGTCTaGGTGTCCCGGCTCTTTCTATGGGAGAAACTTAGC +
Preference number: 6 (lower is better)
Translates to: GQALEADYAASV*VSRLFLWEKLS
Trigger: GCTAAGTTTCTCCCATAGAAAGAGCCGGGACACGCAGACCGAAGCGGCGTAGTCGGCTTCCAGGGCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp GTGGATGGGGGCCTGGACCTCTCAGCAAACACCTGGTaGCGGATCCTGTCCAGGAAGGCGGCATTGATACCA +
Preference number: 6 (lower is better)
Translates to: VDGGLDLSANTW*RILSRKAALIP
Trigger: TGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp GCCATTTTCTCCGAGAGGCCTCGCACGCTCATGAGCTaGGCCGGGGTGGCTGTGTTGATGTTAACACGTGGG +
Preference number: 6 (lower is better)
Translates to: AIFSERPRTLMS*AGVAVLMLTRG
Trigger: CCCACGTGTTAACATCAACACAGCCACCCCGGCCCAGCTCATGAGCGTGCGAGGCCTCTCGGAGAAAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp TGGGTGGATGGGGGCCTGGACCTCTCAGCAAACACCTaGTGCCGGATCCTGTCCAGGAAGGCGGCATTGATA +
Preference number: 6 (lower is better)
Translates to: WVDGGLDLSANT*CRILSRKAALI
Trigger: TATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAGGTCCAGGCCCCCATCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 72 bp AGGAGTGTCATGCACACCACCTCTCGCACCCCGGGGTaGTTGGCCTTCTCCACGGAACAGCCCTGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: RSVMHTTSRTPG*LAFSTEQPCKF
Trigger: GAACTTGCAGGGCTGTTCCGTGGAGAAGGCCAACAACCCCGGGGTGCGAGAGGTGGTGTGCATGACACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp ATCCTCACTAGGTCCTCAACGCTGCGAAAGGGCCCATaGTCACGGCGGAAGTCCACGATGCTGAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: ILTRSSTLRKGP*SRRKSTMLRAI
Trigger: AATGGCCCTCAGCATCGTGGACTTCCGCCGTGAGCATGGGCCCTTTCGCAGCGTTGAGGACCTAGTGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp GGCCCCTTCCACTTGCGGATGTTGGGCAGGGTCGGCTaGTTTAGCTCCGTGCAGAACTTTTCCAAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GPFHLRMLGRVG*FSSVQNFSKAS
Trigger: AGAGGCCTTGGAAAAGTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAACATCCGCAAGTGGAAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp GGCCCCTTCCACTTGCGGATGTTGGGCAGGGTCGGCTaGTTTAGCTCCGTGCAGAACTGCAAAGACAGAGCA +
Preference number: 6 (lower is better)
Translates to: GPFHLRMLGRVG*FSSVQNCKDRA
Trigger: TGCTCTGTCTTTGCAGTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAACATCCGCAAGTGGAAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487069.5
CDS CAA 72 bp CGCAGGGAACTGGGAGAGTGCTGCGCTGAGCTGCCCTaGCTGCTCACACAGATCTCAAACTTGACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RRELGECCAELP*LLTQISNLTCS
Trigger: GGAGCAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGCGCAGCACTCTCCCAGTTCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 90 bp AGGGTGGACACATGGATTTGGTGTCATCATCGCTCGTGCTTGATGTaGGCTTCACTTCGCTCCAAGGCCACCCCGCTGCCGTTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: RVDTWIWCHHRSCLM*ASLRSKATPLPFRG
Trigger: CCCTCGGAACGGCAGCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 90 bp GGTCCCAGGGTGGACACATGGATTTGGTGTCATCATCGCTCGTGCTaGATGTTGGCTTCACTTCGCTCCAAGGCCACCCCGCTGCCGTTC +
Preference number: 6 (lower is better)
Translates to: GPRVDTWIWCHHRSC*MLASLRSKATPLPF
Trigger: GAACGGCAGCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 90 bp TTGGTGGCGCCTACACCACTGACCAATGCCAGGTCCTCCACCTTCTaGAAGCCACCGATATACTCTCGGTACTCCACGATGCTGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LVAPTPLTNARSSTF*KPPIYSRYSTMLRA
Trigger: GGCACGCAGCATCGTGGAGTACCGAGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCACCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 90 bp CTGCCCTTGCTGCTCACACAGATCTCAAACTTGACCTGCTCCAGCTaGGTGGCGCCTACACCACTGACCAATGCCAGGTCCTCCACCTTC +
Preference number: 6 (lower is better)
Translates to: LPLLLTQISNLTCSS*VAPTPLTNARSSTF
Trigger: GAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTAGGCGCCACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 90 bp CTCTCAGCAAACACCTGGTGCCGGATCCTGTCCAGGAAGGCGGCATaGATACCATCCATCCTCACTAGGTCCTCAACGCTGCGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: LSANTWCRILSRKAA*IPSILTRSSTLRKG
Trigger: GCCCTTTCGCAGCGTTGAGGACCTAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTTTGCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp TTTCTATGGGAGAAACTTAGCATCGCTCTCCCAGAGTaGATAGAAGCCGCAGGGCTGCTCGGAGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: FLWEKLSIALPE*IEAAGLLGGGG
Trigger: GCCGCCGCCTCCGAGCAGCCCTGCGGCTTCTATTCACTCTGGGAGAGCGATGCTAAGTTTCTCCCATAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp ACACCTGGTGCCGGATCCTGTCCAGGAAGGCGGCATTaGTACCATCCATCCTCACTAGGTCCTCAACGCTGC +
Preference number: 6 (lower is better)
Translates to: TPGAGSCPGRRH*YHPSSLGPQRC
Trigger: GCAGCGTTGAGGACCTAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS GCA 72 bp TGCGGATGTTGGGCAGGGTCGGCTGGTTTAGCTCCGTaGAGAACTGCAAAGACAGAGCACAGGTCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: CGCWAGSAGLAP*RTAKTEHRSEA
Trigger: CGCTTCTGACCTGTGCTCTGTCTTTGCAGTTCTGCACGGAGCTAAACCAGCCGACCCTGCCCAACATCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487069.5
CDS CAA 72 bp ACTAGAATGTTGCTGAAGTTACAGGCTGCGCTGAACTaGCGGCTATGGGACAGGTCCGAGGGGTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: TRMLLKLQAALN*RLWDRSEGSLG
Trigger: CCCCAGGGACCCCTCGGACCTGTCCCATAGCCGCAAGTTCAGCGCAGCCTGTAACTTCAGCAACATTCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 72 bp GCTGAGCTGCCCTTGCTGCTCACACAGATCTCAAACTaGACCTGCTCCAGCTTGGTGGCGCCTACACCACTG +
Preference number: 6 (lower is better)
Translates to: AELPLLLTQISN*TCSSLVAPTPL
Trigger: CAGTGGTGTAGGCGCCACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGCAGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CCA 72 bp CTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATaGATTTGGTGTCATCATCGCTCGTGCTTGATGTTG +
Preference number: 6 (lower is better)
Translates to: LGCALLGPRVDT*IWCHHRSCLML
Trigger: CAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 72 bp CTGCTCACACAGATCTCAAACTTGACCTGCTCCAGCTaGGTGGCGCCTACACCACTGACCAATGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LLTQISNLTCSS*VAPTPLTNARS
Trigger: GGACCTGGCATTGGTCAGTGGTGTAGGCGCCACCAAGCTGGAGCAGGTCAAGTTTGAGATCTGTGTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 72 bp AACACCTGGTGCCGGATCCTGTCCAGGAAGGCGGCATaGATACCATCCATCCTCACTAGGTCCTCAACGCTG +
Preference number: 6 (lower is better)
Translates to: NTWCRILSRKAA*IPSILTRSSTL
Trigger: CAGCGTTGAGGACCTAGTGAGGATGGATGGTATCAATGCCGCCTTCCTGGACAGGATCCGGCACCAGGTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS CAA 72 bp ACATGGATTTGGTGTCATCATCGCTCGTGCTTGATGTaGGCTTCACTTCGCTCCAAGGCCACCCCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: TWIWCHHRSCLM*ASLRSKATPLP
Trigger: CGGCAGCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 72 bp CTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTaGGTGTCATCATCGCTCGTGCTTGATGTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LCPPGSQGGHMD*VSSSLVLDVGF
Trigger: GAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 90 bp ATTCCTTGGCTGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTaGGTGTCATCATCGCTCGTGCTTGATGTTGGCTTCACTTCGCTC +
Preference number: 6 (lower is better)
Translates to: IPWLCPPGSQGGHMD*VSSSLVLDVGFTSL
Trigger: GAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACAGCCAAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS TCA 72 bp TGGACACATGGATTTGGTGTCATCATCGCTCGTGCTTaGTGTTGGCTTCACTTCGCTCCAAGGCCACCCCGC +
Preference number: 6 (lower is better)
Translates to: WTHGFGVIIARA*CWLHFAPRPPR
Trigger: GCGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CCA 72 bp TGTGCCCTCCTGGGTCCCAGGGTGGACACATGGATTTaGTGTCATCATCGCTCGTGCTTGATGTTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: CALLGPRVDTWI*CHHRSCLMLAS
Trigger: TGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCTGGGACCCAGGAGGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 72 bp GTGGACACATGGATTTGGTGTCATCATCGCTCGTGCTaGATGTTGGCTTCACTTCGCTCCAAGGCCACCCCG +
Preference number: 6 (lower is better)
Translates to: VDTWIWCHHRSC*MLASLRSKATP
Trigger: CGGGGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS GCA 72 bp AGGGTGGACACATGGATTTGGTGTCATCATCGCTCGTaGTTGATGTTGGCTTCACTTCGCTCCAAGGCCACC +
Preference number: 6 (lower is better)
Translates to: RVDTWIWCHHRS*LMLASLRSKAT
Trigger: GGTGGCCTTGGAGCGAAGTGAAGCCAACATCAAGCACGAGCGATGATGACACCAAATCCATGTGTCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242108.9
ENST00000444777.1
ENST00000534978.1
CDS CAA 72 bp CCTACACCACTGACCAATGCCAGGTCCTCCACCTTCTaGAAGCCACCGATATACTCTCGGTACTCCACGATG +
Preference number: 6 (lower is better)
Translates to: PTPLTNARSSTF*KPPIYSRYSTM
Trigger: CATCGTGGAGTACCGAGAGTATATCGGTGGCTTCAAGAAGGTGGAGGACCTGGCATTGGTCAGTGGTGTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp TTACTGATCCAGATGTTGTCCAGAGACTTCGAGCCTTaGGGGTTCTTGGTGCTGATGTTGGTGAAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: LLIQMLSRDFEP*GFLVLMLVKVC
Trigger: GCACACCTTCACCAACATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCTGGACAACATCTGGATCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242108.9
ENST00000468591.1
ENST00000487069.5
ENST00000534978.1
CDS CCA 72 bp GAGGTTACTATAGACAAACACCGAATCTTCCATGCCTaGCGTGTCCAAAATTACCTTTCACTTGGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: EVTIDKHRIFHA*RVQNYLSLGRL
Trigger: GAGGCGGCCAAGTGAAAGGTAATTTTGGACACGCCAGGCATGGAAGATTCGGTGTTTGTCTATAGTAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242108.9
CDS CAA 72 bp TTTACTGATCCAGATGTTGTCCAGAGACTTCGAGCCTaGAGGGTTCTTGGTGCTGATGTTGGTGAAGGTGTG +
Preference number: 6 (lower is better)
Translates to: FTDPDVVQRLRA*RVLGADVGEGV
Trigger: CACACCTTCACCAACATCAGCACCAAGAACCCTCAAGGCTCGAAGTCTCTGGACAACATCTGGATCAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242108.9
ENST00000468591.1
ENST00000487069.5
ENST00000534978.1
CDS GCA 72 bp CAGAACTTTTCCAAGGCCTCTCTGTCAAGCAGTTCTTaGACAGCTAGAAGCTTGATGCTGTTTTCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: QNFSKASLSSSS*TARSLMLFSRS
Trigger: ACTCCTGGAAAACAGCATCAAGCTTCTAGCTGTGCAAGAACTGCTTGACAGAGAGGCCTTGGAAAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242108.9
ENST00000534978.1
CDS TCA 72 bp AAGCACAGAAAAACGGAAGGTGCAGGATTCAGGGACTaGAGAGGTTACTATAGACAAACACCGAATCTTCCA +
Preference number: 6 (lower is better)
Translates to: KHRKTEGAGFRD*RGYYRQTPNLP
Trigger: TGGAAGATTCGGTGTTTGTCTATAGTAACCTCTTCAGTCCCTGAATCCTGCACCTTCCGTTTTTCTGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242108.9