RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EEF1AKMT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000203791

Ensembl transcript IDs: ENST00000368836.7, ENST00000464099.5, ENST00000466270.5, ENST00000495711.2, ENST00000652548.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGACTATTGAGATCAGCGCATGTGAAGCCACACAGCTTTGTAACTaGCTGTCTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: VTIEISACEATQLCN*LSSTIEVRKHASWA
Trigger: GGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAGACAGTCAGTTACAAAGCTGTGTGGCTTCACATGCGCTGATCTCAATAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR CCA 90 bp GTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACAAAGTATaGGTTGTGAGCCTAAGTCCTGAACACAAACCCTGCTTTCCAAGT +
Preference number: 1 (lower is better)
Translates to: VRKHASWASIVHHKV*VVSLSPEHKPCFPS
Trigger: ACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR TCA 90 bp GGCCAGCATTGTGCACCACAAAGTATGGGTTGTGAGCCTAAGTCCTaGACACAAACCCTGCTTTCCAAGTTGGCAGGTGCTGAAAACACA +
Preference number: 1 (lower is better)
Translates to: GQHCAPQSMGCEPKS*TQTLLSKLAGAENT
Trigger: TGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACAATGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR TCA 90 bp CACCTCCCACAATCAAGCTCTAGGTCATGGGCAGCCTTCATTCAGTaGAATGTACGAGACAAGACTTCTTTCAGAGCCCATCAACACTCC +
Preference number: 1 (lower is better)
Translates to: HLPQSSSRSWAAFIQ*NVRDKTSFRAHQHS
Trigger: GGAGTGTTGATGGGCTCTGAAAGAAGTCTTGTCTCGTACATTTCACTGAATGAAGGCTGCCCATGACCTAGAGCTTGATTGTGGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR GCA 90 bp CACCACAAAGTATGGGTTGTGAGCCTAAGTCCTGAACACAAACCCTaGTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGC +
Preference number: 1 (lower is better)
Translates to: HHKVWVVSLSPEHKP*FPSWQVLKTQQMSR
Trigger: GCGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR CCA 90 bp TGGGTTGTGAGCCTAAGTCCTGAACACAAACCCTGCTTTCCAAGTTaGCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACT +
Preference number: 1 (lower is better)
Translates to: WVVSLSPEHKPCFPS*QVLKTQQMSRLQLT
Trigger: AGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR TCA 90 bp AGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAAAGTAATGAAGGATaGTATGAGACAGAGTTGGCTGACTGCTATTCTGATACTCCACAG +
Preference number: 1 (lower is better)
Translates to: RGKSLSREMGKSNEG*YETELADCYSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGTCTCATATCATCCTTCATTACTTTTCCCCATCTCCCTACTCAAAGACTTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR GCA 90 bp CAGGCTGCCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATaGCAGTCCCAAAAAGCAACTCTAACTTGTGCACCTGGCTTAAAA +
Preference number: 1 (lower is better)
Translates to: QAAKSDIRFDSHIHK*QSQKATLTCAPGLK
Trigger: TTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGGCAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR GCA 90 bp CAACACCCTGGAGAGAGATTTCACATATTGCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCTTATGGCATCAAAAGTCCCTTTGTC +
Preference number: 1 (lower is better)
Translates to: QHPGERFHILLPLLN*IVRIKAYGIKSPFV
Trigger: GACAAAGGGACTTTTGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCTCTCCAGGGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR GCA 90 bp GTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTaGATTTCAAACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAA +
Preference number: 1 (lower is better)
Translates to: VKSSNSVKAPQRNRV*ISNKFPQSKRLSIK
Trigger: TTTAATCGAAAGACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR TCA 90 bp GGATTAAGGCTTATGGCATCAAAAGTCCCTTTGTCAATACAAATATaGAATCCAGACAGCTGTGTGGAGAGATTCAAAAAGTCTTCTACC +
Preference number: 1 (lower is better)
Translates to: GLRLMASKVPLSIQI*NPDSCVERFKKSST
Trigger: GGTAGAAGACTTTTTGAATCTCTCCACACAGCTGTCTGGATTTCATATTTGTATTGACAAAGGGACTTTTGATGCCATAAGCCTTAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR GCA 90 bp GAAAAGGGACGTAATGTTAGACTTACTCAATACAGGAGTAACATTTaGCAAACAAAAAGTCACTTATGTAACCCAATAGGCCCACAAAGC +
Preference number: 1 (lower is better)
Translates to: EKGRNVRLTQYRSNI*QTKSHLCNPIGPQS
Trigger: GCTTTGTGGGCCTATTGGGTTACATAAGTGACTTTTTGTTTGGCAAATGTTACTCCTGTATTGAGTAAGTCTAACATTACGTCCCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR TCA 90 bp TGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATaGAATCACAATTCCAGCTTCTTATCCACAGAAAACAGCATTCAC +
Preference number: 1 (lower is better)
Translates to: CISNKFPQSKRLSIK*NHNSSFLSTENSIH
Trigger: GTGAATGCTGTTTTCTGTGGATAAGAAGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGTTTGAAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp CTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTAAGTCAAGGCTGCAGTaGGCCAAAATCCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LNSLWTCTRTSYTQKWPVKSRLQ*AKILPL
Trigger: CAGTGGCAGGATTTTGGCTCACTGCAGCCTTGACTT...AACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR TCA 90 bp ACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACAAAGTATGTGAGCCTAAGTCCTaGACACAAACCCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: TIEVRKHASWASIVHHKVCEPKS*TQTLLS
Trigger: GGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACA...TACTTTGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR-3UTR CCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATCTTTGGGAGGCCAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHLWEAR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTGGCCTCCCAAAG...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR CAA 90 bp TTAATTGGGATAACCCACCCATTCAGGCCTCAATTCCCTTTGGACTaGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCA +
Preference number: 2 (lower is better)
Translates to: LIGITHPFRPQFPLD*HTHFLHTEVACYAA
Trigger: TGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAATGGGTGGGTTATCCCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CCA 90 bp CTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCTAATGCCAACGAGGGCCTaGCATGGTATAATCCCAGCA +
Preference number: 2 (lower is better)
Translates to: LPPKLNLGVGSSSRSSNLMPTRA*HGIIPA
Trigger: TGCTGGGATTATACCATGCCAGGCCCTCGTTGGCAT...TAGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR TCA 90 bp AGGCTTCTTACCCGTCGCTTTTCAGAGTTCCATTGTAGAGCTGGTTTTATTCAGGTTTCAGGAACCTGGTaGCACTTGCTGGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: RLLTRRFSEFHCRAGFIQVSGTW*HLLAWF
Trigger: AAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAAC...CTGAATAAAACCAGCTCTACAATGGAACTCTGAAAAGCGACGGGTAAGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CCA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTCTCGGGAGGCTGAAGTaGAAAAGATCGCTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCLGRLK*KRSLEP
Trigger: GGGCTCAAGCGATCTTTTCCACTTCAGCCTCCCGAG...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR GCA 90 bp CTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAAACCATAGCTGCAAAATaGAGGCTTGATAACTTGAGC +
Preference number: 2 (lower is better)
Translates to: LWTCTRTSYTQKWPVMQQTIAAK*RLDNLS
Trigger: GCTCAAGTTATCAAGCCTGCATTTTGCAGCTATGGT...TTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp GACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCACAGAGTTGGCTGACTaGTATTCTGATACTCCACAG +
Preference number: 2 (lower is better)
Translates to: DLHTHFLHTEVACYAAIITELAD*YSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGT...GATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR CAA 90 bp TATTTGTTAATTGGGATAACCCACCCATTCAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: YLLIGITHPFRPQFP*DLHTHFLHTEVACY
Trigger: ATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAATGGGTGGGTTATCCCAATTAACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR CAA 90 bp TGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGCTaGCAACTCACTGGAGGGAAGAGTTCTGGTAAAGTAAGTAAGCAT +
Preference number: 2 (lower is better)
Translates to: CFPSWQVLKTQQMSR*QLTGGKSSGKVSKH
Trigger: ATGCTTACTTACTTTACCAGAACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR-3UTR TCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: APQRNRVCISNKFPQSKRICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR GCA 90 bp CTGTTTCCAGATCTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGACTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCT +
Preference number: 2 (lower is better)
Translates to: LFPDLPPKLNLGVGSSSRLPLLN*IVRIKA
Trigger: AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...TCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR CAA 90 bp ACCAATGCTGCTACACTGTTTCCAGATCTGCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCTAAAATGCCAA +
Preference number: 2 (lower is better)
Translates to: TNAATLFPDLPPKLN*GVGSSSRSSNLKCQ
Trigger: TTGGCATTTTAGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAGTGTAGCAGCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR TCA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAGTTTCAGGAACCTGGTaGCACTTGCTGGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: FVLVLVPKKLASSRIRVIVSGTW*HLLAWF
Trigger: AAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAAC...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATACCATAGCTGCAAAATaGAGGCTTGATAACTTGAGC +
Preference number: 2 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHTIAAK*RLDNLS
Trigger: GCTCAAGTTATCAAGCCTGCATTTTGCAGCTATGGT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp ACATACACGTTAGCTTACAGAGCCAAAAACAGGAAATCAAACCCCAGGGCTCTCCAAAACCCAGAAGATTaGATGCGTACCACAGATGAA +
Preference number: 2 (lower is better)
Translates to: TYTLAYRAKNRKSNPRALQNPED*MRTTDE
Trigger: TTCATCTGTGGTACGCATGCAATCTTCTGGGTTTTG...GAGAGCCCTGGGGTTTGATTTCCTGTTTTTGGCTCTGTAAGCTAACGTGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CCA 90 bp GACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCGATATGAGACAGAGTTaGCTGACTGCTATTCTGATA +
Preference number: 2 (lower is better)
Translates to: DLHTHFLHTEVACYAAIIDMRQS*LTAILI
Trigger: TATCAGAATAGCAGTCAGCCAACTCTGTCTCATATC...GATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CCA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAGGCCTCAATTCCCTTTaGACTTGCACACGCACTTCC +
Preference number: 2 (lower is better)
Translates to: FVLVLVPKKLASSRIRVIGLNSL*TCTRTS
Trigger: GGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCC...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR GCA 90 bp GACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCTTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: DLHTHFLHTEVACYAAIIFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...GATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR GCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTACAGAGTTGGCTGACTaGTATTCTGATACTCCACAG +
Preference number: 2 (lower is better)
Translates to: APQRNRVCISNKFPQSKRTELAD*YSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGT...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp TATGAAATCCAGACAGCTGTGTGGAGAGATTCAAAAAGTCTTCTACCTTTAACTATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 2 (lower is better)
Translates to: YEIQTAVWRDSKSLLPLTICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...AGTTAAAGGTAGAAGACTTTTTGAATCTCTCCACACAGCTGTCTGGATTTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR TCA 90 bp ATACATAAATGCCAGTCCCAAAAAGCAACTCTAACTTGTGCACCTGGCTTAAAAAAAGCAGCAATTCCGTaGAGGCTCCACAGAGAAATC +
Preference number: 2 (lower is better)
Translates to: IHKCQSQKATLTCAPGLKKAAIP*RLHREI
Trigger: GATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTT...TTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTTTGGGACTGGCATTTATGTAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATTTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR GCA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGACAGAGTTGGCTGACTaGTATTCTGATACTCCACAG +
Preference number: 2 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQTELAD*YSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGT...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAGAACCTGGTGACACTTaGTGGCCTGGTTTTTACAGT +
Preference number: 2 (lower is better)
Translates to: FVLVLVPKKLASSRIRVIEPGDT*WPGFYS
Trigger: ACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CCA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTGGCCTCAATTCCCTTTaGACTTGCACACGCACTTCC +
Preference number: 2 (lower is better)
Translates to: TSFLKVSVFRLNEITIPAGLNSL*TCTRTS
Trigger: GGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCC...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CCA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAAAACGAGGGCCTGGCATaGTATAATCCCAGCACTTTG +
Preference number: 2 (lower is better)
Translates to: TSQSSHTESLVCRISTLKNEGLA*YNPSTL
Trigger: CAAAGTGCTGGGATTATACCATGCCAGGCCCTCGTT...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR TCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 2 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAATTCCCTTTGGACTTaGACACGCACTTCCTACACA +
Preference number: 2 (lower is better)
Translates to: FVLVLVPKKLASSRIRVINSLWT*TRTSYT
Trigger: TGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATT...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp CTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCTAAGAGATTTCACATATTaGTTCCTCTTCTCAATTGCA +
Preference number: 2 (lower is better)
Translates to: LPPKLNLGVGSSSRSSNLRDFTY*FLFSIA
Trigger: TGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCT...TAGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR GCA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGAGTTCAAATCTAAAATaGCAACGAGGGCCTGGCATG +
Preference number: 2 (lower is better)
Translates to: PRVISGLILTYINASPKKSSNLK*QRGPGM
Trigger: CATGCCAGGCCCTCGTTGGCATTTTAGATTTGAACT...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR CCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTGATATGAGACAGAGTTaGCTGACTGCTATTCTGATA +
Preference number: 2 (lower is better)
Translates to: APQRNRVCISNKFPQSKRDMRQS*LTAILI
Trigger: TATCAGAATAGCAGTCAGCCAACTCTGTCTCATATC...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp TTCTTCTATGGACATCTCTGTTTCCTGCCTAACCAAGAGAAATGTAAGGATTTCGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 2 (lower is better)
Translates to: FFYGHLCFLPNQEKCKDFAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...GAAATCCTTACATTTCTCTTGGTTAGGCAGGAAACAGAGATGTCCATAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR GCA 90 bp ATGACAAAAGTACATTCTGCCAGCCTATACATTTCAGTTTTTGAAGTCCTACTCAATTCCCTTTGGACTTaGACACGCACTTCCTACACA +
Preference number: 2 (lower is better)
Translates to: MTKVHSASLYISVFEVLLNSLWT*TRTSYT
Trigger: TGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATT...GAGTAGGACTTCAAAAACTGAAATGTATAGGCTGGCAGAATGTACTTTTGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR CCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTTTAGCAACTCTTCCTTaGTCCAATTACATGACGTTA +
Preference number: 2 (lower is better)
Translates to: APQRNRVCISNKFPQSKRLATLP*SNYMTL
Trigger: TAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAA...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR TCA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCATTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: TYCFLFSIALSGLRLMASFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR CCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTTTTGTATTTGTTAATTaGGATAACCCACCCATTCAG +
Preference number: 2 (lower is better)
Translates to: APQRNRVCISNKFPQSKRFVFVN*DNPPIQ
Trigger: CTGAATGGGTGGGTTATCCCAATTAACAAATACAAA...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 2 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR TCA 90 bp TTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCTTGTCAATACAAATATaGAATCCAGACAGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FHILLPLLNCIVRIKAYGLSIQI*NPDSCV
Trigger: CACACAGCTGTCTGGATTTCATATTTGTATTGACAA...GCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR TCA 90 bp GAGAGATTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTTGTCAATACAAATATaGAATCCAGACAGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: ERFHILLPLLNCIVRIKALSIQI*NPDSCV
Trigger: CACACAGCTGTCTGGATTTCATATTTGTATTGACAA...AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR GCA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCATCCAGAAAGCTGAATTaGAGAAGGAGAGTAATCAAT +
Preference number: 2 (lower is better)
Translates to: TYCFLFSIALSGLRLMASSRKLN*RRRVIN
Trigger: ATTGATTACTCTCCTTCTGCAATTCAGCTTTCTGGA...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR CCA 90 bp CCTTCACTGAATTCATTTAGCAACTCTTCCTTGGTCCAATTACATGACGTTATTATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: PSLNSFSNSSLVQLHDVIIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...AATAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAATGAATTCAGTGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR TCA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTATTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR GCA 90 bp TTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 2 (lower is better)
Translates to: FLSPIQYTLFNMCILCTYFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...GTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR GCA 90 bp CCTTCACTGAATTCATTTAGCAACTCTTCCTTGGTCCAATTACATGACGTTATTTCCAGAAAGCTGAATTaGAGAAGGAGAGTAATCAAT +
Preference number: 2 (lower is better)
Translates to: PSLNSFSNSSLVQLHDVISRKLN*RRRVIN
Trigger: ATTGATTACTCTCCTTCTGCAATTCAGCTTTCTGGA...AATAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAATGAATTCAGTGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR CAA 90 bp CTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACACAGCAAATGTCACGCTaGCAACTCACTGGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LAPLRYESMPAGPALCTTQQMSR*QLTGGK
Trigger: CTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTG...TGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR TCA 72 bp CCACCTACTCGGGAGGCTGAAGTGGAAAAGATCGCTTaGGCCCAGGAAGTCAAGGCTGCAGTGAGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: PPTREAEVEKIA*AQEVKAAVSQN
Trigger: ATTTTGGCTCACTGCAGCCTTGACTTCCTGGGCTCAAGCGATCTTTTCCACTTCAGCCTCCCGAGTAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR-3UTR CAA 90 bp TTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATACCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 3 (lower is better)
Translates to: LDLHTHFLHTEVACYAAIPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...TATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR CAA 90 bp TTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTC +
Preference number: 3 (lower is better)
Translates to: LDLHTHFLHTEVACYAAIRPQFP*DLHTHF
Trigger: GAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCT...TATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR TCA 72 bp TGTGCACCACAAAGTATGGGTTGTGAGCCTAAGTCCTaGACACAAACCCTGCTTTCCAAGTTGGCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: CAPQSMGCEPKS*TQTLLSKLAGA
Trigger: AGCACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR GCA 72 bp GTATGGGTTGTGAGCCTAAGTCCTGAACACAAACCCTaGTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAA +
Preference number: 3 (lower is better)
Translates to: VWVVSLSPEHKP*FPSWQVLKTQQ
Trigger: TTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACAACCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR-3UTR CAA 90 bp CTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTAATAGAGGCAAGTCTTaGAGTAGGGAGATGGGGAAA +
Preference number: 3 (lower is better)
Translates to: LNSLWTCTRTSYTQKWPVNRGKS*SREMGK
Trigger: TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATT...AACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp AGGCTTCTTACCCGTCGCTTTTCAGAGTTCCATTGTAGAGCTGGTTTTATTCAGCAATTCCCTTTGGACTaGCACACGCACTTCCTACAC +
Preference number: 3 (lower is better)
Translates to: RLLTRRFSEFHCRAGFIQQFPLD*HTHFLH
Trigger: GTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTG...CTGAATAAAACCAGCTCTACAATGGAACTCTGAAAAGCGACGGGTAAGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CAA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 3 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR CAA 90 bp CTGTTTCCAGATCTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGATGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: LFPDLPPKLNLGVGSSSRCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...TCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR CAA 90 bp CTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: LNSLWTCTRTSYTQKWPVCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...AACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATAATAGAGGCAAGTCTTaGAGTAGGGAGATGGGGAAA +
Preference number: 3 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHNRGKS*SREMGK
Trigger: TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp CAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCCAAAAACAGGAACTGGATAAATGTGAATaGAGGTCAACATACAGTACC +
Preference number: 3 (lower is better)
Translates to: QRAVQEHIHVSLQSQKQELDKCE*RSTYST
Trigger: GGTACTGTATGTTGACCTCAATTCACATTTATCCAG...TTCCTGTTTTTGGCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR TCA 72 bp CAATCAAGCTCTAGGTCATGGGCAGCCTTCATTCAGTaGAATGTACGAGACAAGACTTCTTTCAGAGCCCAT +
Preference number: 3 (lower is better)
Translates to: QSSSRSWAAFIQ*NVRDKTSFRAH
Trigger: ATGGGCTCTGAAAGAAGTCTTGTCTCGTACATTTCACTGAATGAAGGCTGCCCATGACCTAGAGCTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CAA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 3 (lower is better)
Translates to: HQSSILYSTCASCVLTKHPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
3UTR-3UTR CAA 90 bp GACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCACAGAGAAATCGCGTTaGCATTTCAAACAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: DLHTHFLHTEVACYAAIITEKSR*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGT...GATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGTGGAAAAGATCGCTaGAGCCCAGGAAGTCAAGGC +
Preference number: 3 (lower is better)
Translates to: FVLVLVPKKLASSRIRVISGKDR*SPGSQG
Trigger: GCCTTGACTTCCTGGGCTCAAGCGATCTTTTCCACT...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR GCA 72 bp AGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTaGATTTCAAACAAGTTTCCTCAAAGTAAGCGTCTT +
Preference number: 3 (lower is better)
Translates to: SNSVKAPQRNRV*ISNKFPQSKRL
Trigger: AAGACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTC +
Preference number: 3 (lower is better)
Translates to: TSFLKVSVFRLNEITIPARPQFP*DLHTHF
Trigger: GAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCT...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 3 (lower is better)
Translates to: APQRNRVCISNKFPQSKRKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
3UTR-3UTR CAA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp ATGACAAAAGTACATTCTGCCAGCCTATACATTTCAGTTTTTGAAGTCCTACTCAGAAAACCTTCACCTTaGCAAATGGCACTAACATGC +
Preference number: 3 (lower is better)
Translates to: MTKVHSASLYISVFEVLLRKPSP*QMALTC
Trigger: GCATGTTAGTGCCATTTGCAAAGGTGAAGGTTTTCT...GAGTAGGACTTCAAAAACTGAAATGTATAGGCTGGCAGAATGTACTTTTGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CAA 90 bp CTTGATGTTGAGTTTCATTTCTATGCCCTGAACATAGGAATCCATCAATTGACCACAGAGAAATCGCGTTaGCATTTCAAACAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: LDVEFHFYALNIGIHQLTTEKSR*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGT...GGTCAATTGATGGATTCCTATGTTCAGGGCATAGAAATGAAACTCAACATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR-3UTR CAA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTTTTAGCAACTCTTCCTaGGTCCAATTACATGACGTT +
Preference number: 3 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLFSNSS*VQLHDV
Trigger: AACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAA...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466270.5
3UTR GCA 72 bp GGAGAGAGATTTCACATATTGCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCTTATGGCATCAAAAGT +
Preference number: 3 (lower is better)
Translates to: GERFHILLPLLN*IVRIKAYGIKS
Trigger: ACTTTTGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR CCA 72 bp ATTTATGGTTTGTTTCAGGAACCTGGTGACACTTGCTaGCCTGGTTTTTACAGTTTGGTATTATGTGAAAAT +
Preference number: 3 (lower is better)
Translates to: IYGLFQEPGDTC*PGFYSLVLCEN
Trigger: ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAACAAACCATAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR-3UTR CAA 90 bp CCTTCACTGAATTCATTTAGCAACTCTTCCTTGGTCCAATTACATGACGTTATTAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 3 (lower is better)
Translates to: PSLNSFSNSSLVQLHDVIKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...AATAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAATGAATTCAGTGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
3UTR GCA 72 bp CGTAATGTTAGACTTACTCAATACAGGAGTAACATTTaGCAAACAAAAAGTCACTTATGTAACCCAATAGGC +
Preference number: 3 (lower is better)
Translates to: RNVRLTQYRSNI*QTKSHLCNPIG
Trigger: GCCTATTGGGTTACATAAGTGACTTTTTGTTTGGCAAATGTTACTCCTGTATTGAGTAAGTCTAACATTACG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR TCA 72 bp AACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATaGAATCACAATTCCAGCTTCTTATCCACAGAAAAC +
Preference number: 3 (lower is better)
Translates to: NKFPQSKRLSIK*NHNSSFLSTEN
Trigger: GTTTTCTGTGGATAAGAAGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAACGTCCTCCCCGGGACTaGCCTTGTCCGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LWTCTRTSYTQKWPVMQQRPPRD*PCPTAP
Trigger: CGGCGCGGTCGGACAAGGGCAGTCCCGGGGAGGACG...TTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp GACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCCGTCCTCCCCGGGACTaGCCTTGTCCGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: DLHTHFLHTEVACYAAIIRPPRD*PCPTAP
Trigger: CGGCGCGGTCGGACAAGGGCAGTCCCGGGGAGGACG...GATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp CAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCCAAAAACAGGAAGTCCTGGACGGCCGTTaGGGCCGCCATAGAGACGGG +
Preference number: 4 (lower is better)
Translates to: QRAVQEHIHVSLQSQKQEVLDGR*GRHRDG
Trigger: CCCGTCTCTATGGCGGCCCCAACGGCCGTCCAGGAC...TTCCTGTTTTTGGCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp CTGTTTCCAGATCTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGATTTCGCTCCACGTCCTaGACGGCCGTTGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LFPDLPPKLNLGVGSSSRFRSTS*TAVGAA
Trigger: GGCGGCCCCAACGGCCGTCCAGGACGTGGAGCGAAA...TCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CCA 90 bp CTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACACGAAAGCATGCCAGCTaGGCCAGCATTGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LAPLRYESMPAGPALCTTRKHAS*ASIVHH
Trigger: GTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCG...TGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR GCA 90 bp CTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACAGCTGGGCCAGCATTGTaGACCACAAAGTATGGGTTG +
Preference number: 4 (lower is better)
Translates to: LAPLRYESMPAGPALCTTAGPAL*TTKYGL
Trigger: CAACCCATACTTTGTGGTGCACAATGCTGGCCCAGC...TGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR GCA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATCGTCCTCCCCGGGACTaGCCTTGTCCGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: HQSSILYSTCASCVLTKHRPPRD*PCPTAP
Trigger: CGGCGCGGTCGGACAAGGGCAGTCCCGGGGAGGACG...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGCGTCCTCCCCGGGACTaGCCTTGTCCGACCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PRVISGLILTYINASPKKRPPRD*PCPTAP
Trigger: CGGCGCGGTCGGACAAGGGCAGTCCCGGGGAGGACG...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp CTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACACAAGTTGGCAGGTGCTaGAAACACAGCAAATGTCAC +
Preference number: 4 (lower is better)
Translates to: LAPLRYESMPAGPALCTTQVGRC*KHSKCH
Trigger: GTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTG...TGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATGTCCTGGACGGCCGTTaGGGCCGCCATAGAGACGGG +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENVLDGR*GRHRDG
Trigger: CCCGTCTCTATGGCGGCCCCAACGGCCGTCCAGGAC...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000652548.1
CDS-3UTR TCA 90 bp GCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTGTGAGCCTAAGTCCTaGACACAAACCCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AGAENTANVTLATHWREECEPKS*TQTLLS
Trigger: GGAAAGCAGGGTTTGTGTTCAGGACTTAGGCTCACA...CTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CCA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATTTTCGCTCCACGTCCTaGACGGCCGTTGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HQSSILYSTCASCVLTKHFRSTS*TAVGAA
Trigger: GGCGGCCCCAACGGCCGTCCAGGACGTGGAGCGAAA...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp CTGTTTCCAGATCTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGAATGCCAACGAGGGCCTaGCATGGTATAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LFPDLPPKLNLGVGSSSRMPTRA*HGIIPA
Trigger: TGCTGGGATTATACCATGCCAGGCCCTCGTTGGCAT...TCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp GCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGCCCTGCTTTCCAAGTTaGCAGGTGCTGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: AGAENTANVTLATHWREEPCFPS*QVLKTQ
Trigger: CTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGG...CTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495711.2
3UTR CAA 72 bp ATAACCCACCCATTCAGGCCTCAATTCCCTTTGGACTaGCACACGCACTTCCTACACACAGAAGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ITHPFRPQFPLD*HTHFLHTEVAC
Trigger: ACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAATGGGTGGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGTTTCAGGAACCTGGTaGCACTTGCTGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IQASIPFGLAHALPTHRSVSGTW*HLLAWF
Trigger: AAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAAC...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp TATGAAATCCAGACAGCTGTGTGGAGAGATTCAAAAAGTCTTCTACCTTTAACTTTTCGCTCCACGTCCTaGACGGCCGTTGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YEIQTAVWRDSKSLLPLTFRSTS*TAVGAA
Trigger: GGCGGCCCCAACGGCCGTCCAGGACGTGGAGCGAAA...AGTTAAAGGTAGAAGACTTTTTGAATCTCTCCACACAGCTGTCTGGATTTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CCA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTCAATTCCCTTTaGACTTGCACACGCACTTCC +
Preference number: 4 (lower is better)
Translates to: IQASIPFGLAHALPTHRSGLNSL*TCTRTS
Trigger: GGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCC...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp TTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAGGCCTCAATTCCCTTTaGACTTGCACACGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LDLHTHFLHTEVACYAAIGLNSL*TCTRTS
Trigger: GGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCC...TATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR CAA 72 bp ATTGGGATAACCCACCCATTCAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTCCTACACACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IGITHPFRPQFP*DLHTHFLHTEV
Trigger: CACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAATGGGTGGGTTATCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATAAGTCAAGGCTGCAGTaGGCCAAAATCCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHKSRLQ*AKILPL
Trigger: CAGTGGCAGGATTTTGGCTCACTGCAGCCTTGACTT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR TCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTGGTGGGAGAATCACTTaGGCCCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: APQRNRVCISNKFPQSKRGGRIT*AQEFQT
Trigger: GGTCTGGAACTCCTGGGCTCAAGTGATTCTCCCACC...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR TCA 90 bp GCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGACACAGCTTTGTAACTaGCTGTCTAGCACCATTGAG +
Preference number: 4 (lower is better)
Translates to: AGAENTANVTLATHWREETQLCN*LSSTIE
Trigger: CTCAATGGTGCTAGACAGTCAGTTACAAAGCTGTGT...CTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR GCA 90 bp AGCATTGTGCACCACAAAGTATGGGTTGTGAGCCTAAGTCCTGAACACAAACCCCCTGAACACAAACCCTaGTTTCCAAGTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SIVHHKVWVVSLSPEHKPPEHKP*FPSWQV
Trigger: CACCTGCCAACTTGGAAAGCAGGGTTTGTGTTCAGG...GGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CCA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTAACGAGGGCCTGGCATaGTATAATCCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: IQASIPFGLAHALPTHRSNEGLA*YNPSTL
Trigger: CAAAGTGCTGGGATTATACCATGCCAGGCCCTCGTT...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp CTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTCCTGGTGACACTTGCTaGCCTGGTTTTTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: LNSLWTCTRTSYTQKWPVPGDTC*PGFYSL
Trigger: CAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGG...AACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TCATGGGTCTCCAGCTGTACTGTAAATGCTACAAAGGCAAAGACTAAGCACCTGATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SWVSSCTVNATKAKTKHLICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...CAGGTGCTTAGTCTTTGCCTTTGTAGCATTTACAGTACAGCTGGAGACCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp AGCATTGTGCACCACAAAGTATGGGTTGTGAGCCTAAGTCCTGAACACAAACCCCAGCTTGAAGAGGAGTaGCTATTGAGATCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SIVHHKVWVVSLSPEHKPQLEEE*LLRSAH
Trigger: ATGCGCTGATCTCAATAGTCACTCCTCTTCAAGCTG...GGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR TCA 90 bp CAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTGAGTTGAAAGCAGCTTaGAGAGGAGTGACTATTGAG +
Preference number: 4 (lower is better)
Translates to: QVLKTQQMSRLQLTGGKSELKAA*RGVTIE
Trigger: CTCAATAGTCACTCCTCTTCAAGCTGCTTTCAACTC...ACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR GCA 90 bp CTAGCACCATTGAGGTACGAAAGCATGCCAGCTGGGCCAGCATTGTGCACCACATTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LAPLRYESMPAGPALCTTFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...TGTGGTGCACAATGCTGGCCCAGCTGGCATGCTTTCGTACCTCAATGGTGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR GCA 90 bp CAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCCAAAAACAGGAAAATTCCCTTTGGACTTaGACACGCACTTCCTACACA +
Preference number: 4 (lower is better)
Translates to: QRAVQEHIHVSLQSQKQENSLWT*TRTSYT
Trigger: TGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATT...TTCCTGTTTTTGGCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp ACACAAACCCTGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGAGCAAATGTCACGCTTaGAACTCACTGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQTLLSKLAGAENTANVTSKCHA*NSLEGR
Trigger: TCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCT...CGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CCA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCTTTGGGAGGCCAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSLWEAR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTGGCCTCCCAAAG...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR TCA 90 bp CTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATCCAATATCAAGCACTaGAGCATCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LWTCTRTSYTQKWPVMQQSNIKH*SIQWNL
Trigger: AAGATTCCACTGGATGCTTCAGTGCTTGATATTGGA...TTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATACTCTCAAAGCAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 4 (lower is better)
Translates to: ILSKQRAVQEHIHVSLQSAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...GCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTGCTTTGAGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp GTATTTATGGTTTGTTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACACCAGGAAGTCAAGGCTaGAGTGAGCCAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: VFMVCFRNLVTLAGLVFTPGSQG*SEPKSC
Trigger: GCAGGATTTTGGCTCACTGCAGCCTTGACTTCCTGG...TGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAACAAACCATAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR GCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTCCAGGAAGTCAAGGCTaGAGTGAGCCAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: APQRNRVCISNKFPQSKRPGSQG*SEPKSC
Trigger: GCAGGATTTTGGCTCACTGCAGCCTTGACTTCCTGG...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp AATGGCTTTAGTCAGGCTGCCAAGAGTGATATCAGGTTTGATTCTCACATACATCTTTGGGAGGCCAGGTaGGAGAATCACTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: NGFSQAAKSDIRFDSHIHLWEAR*ENHLSP
Trigger: TGGGCTCAAGTGATTCTCCCACCTGGCCTCCCAAAG...ATGTATGTGAGAATCAAACCTGATATCACTCTTGGCAGCCTGACTAAAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATTGTAGCCTGTGGGCTTaGGTATTTGTCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHCSLWA*VFVCLM
Trigger: CATCAAGCAGACAAATACCCAAGCCCACAGGCTACA...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR CAA 72 bp GCTACACTGTTTCCAGATCTGCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCCT +
Preference number: 4 (lower is better)
Translates to: ATLFPDLPPKLN*GVGSSSRSSNP
Trigger: AGGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAGTGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464099.5
CDS-3UTR TCA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATGTTTCAGGAACCTGGTaGCACTTGCTGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENVSGTW*HLLAWF
Trigger: AAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAAC...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp TTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAACCATAGCTGCAAAATaGAGGCTTGATAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: LDLHTHFLHTEVACYAAITIAAK*RLDNLS
Trigger: GCTCAAGTTATCAAGCCTGCATTTTGCAGCTATGGT...TATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATAATTCCCTTTGGACTTaGACACGCACTTCCTACACA +
Preference number: 4 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHNSLWT*TRTSYT
Trigger: TGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTAACGAGGGCCTGGCATaGTATAATCCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: APQRNRVCISNKFPQSKRNEGLA*YNPSTL
Trigger: CAAAGTGCTGGGATTATACCATGCCAGGCCCTCGTT...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp CTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAAGATATGAGACAGAGTTaGCTGACTGCTATTCTGATA +
Preference number: 4 (lower is better)
Translates to: LWTCTRTSYTQKWPVMQQDMRQS*LTAILI
Trigger: TATCAGAATAGCAGTCAGCCAACTCTGTCTCATATC...TTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
3UTR CAA 72 bp GCTACACTGTTTCCAGATCTGCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: ATLFPDLPPKLN*GVGSSSRSSNL
Trigger: TAGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAGTGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR TCA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAGGTGGGAGAATCACTTaGGCCCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQGGRIT*AQEFQT
Trigger: GGTCTGGAACTCCTGGGCTCAAGTGATTCTCCCACC...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR TCA 90 bp CTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTTCTGGTTTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LKTQQMSRLQLTGGKSSGFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...ACCAGAACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR TCA 90 bp AGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 4 (lower is better)
Translates to: SSNSVKAPQRNRVCISNKAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...CTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATACAGTGGTATCAGCATaGCAAAAGTACATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHTVVSA*QKYILP
Trigger: TGGCAGAATGTACTTTTGTCATGCTGATACCACTGT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAACCTGGTGACACTTaGTGGCCTGGTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCEPGDT*WPGFYS
Trigger: ACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTGAACCTGGTGACACTTaGTGGCCTGGTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: APQRNRVCISNKFPQSKREPGDT*WPGFYS
Trigger: ACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CTGTTTCCAGATCTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGAAGAGAAACCAAATTTTaGCAACAAGTTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LFPDLPPKLNLGVGSSSRRETKF*QQVQPG
Trigger: TCCTGGTTGAACTTGTTGGCAAAATTTGGTTTCTCT...TCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGATCTGGAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CCA 90 bp ATACATAAATGCCAGTCCCAAAAAGCAACTCTAACTTGTGCACCTGGCTTAAAAATGCCAACGAGGGCCTaGCATGGTATAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IHKCQSQKATLTCAPGLKMPTRA*HGIIPA
Trigger: TGCTGGGATTATACCATGCCAGGCCCTCGTTGGCAT...TTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTTTGGGACTGGCATTTATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTGGCCTCAATTCCCTTTaGACTTGCACACGCACTTCC +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLGLNSL*TCTRTS
Trigger: GGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCC...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TCAATTGCATTGTCAGGATTAAGGCTTATGGCATCAAAAGTCCCTTTGTCAATAGTTTCAGGAACCTGGTaGCACTTGCTGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SIALSGLRLMASKVPLSIVSGTW*HLLAWF
Trigger: AAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAAC...TATTGACAAAGGGACTTTTGATGCCATAAGCCTTAATCCTGACAATGCAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR TCA 90 bp CTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTTCTGGTCCAATCCCACTCCTTTaGTACAAAATAAGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LKTQQMSRLQLTGGKSSGPIPLL*YKIRVE
Trigger: TTCAACTCTTATTTTGTATCAAAGGAGTGGGATTGG...ACCAGAACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR TCA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTGCAGCCTTCATTCAGTaGAATGTACGAGACAAGACT +
Preference number: 4 (lower is better)
Translates to: APQRNRVCISNKFPQSKRAAFIQ*NVRDKT
Trigger: AGTCTTGTCTCGTACATTTCACTGAATGAAGGCTGC...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp AGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSNSVKAPQRNRVCISNKLPLLN*IVRIKA
Trigger: AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...CTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp TTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATATTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LDLHTHFLHTEVACYAAIFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...TATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AGGCTTCTTACCCGTCGCTTTTCAGAGTTCCATTGTAGAGCTGGTTTTATTCAGCAAAACCCAGAAGATTaGATGCGTACCACAGATGAA +
Preference number: 4 (lower is better)
Translates to: RLLTRRFSEFHCRAGFIQQNPED*MRTTDE
Trigger: TTCATCTGTGGTACGCATGCAATCTTCTGGGTTTTG...CTGAATAAAACCAGCTCTACAATGGAACTCTGAAAAGCGACGGGTAAGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTCTCGGGAGGCTGAAGTaGAAAAGATCGCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TSFLKVSVFRLNEITIPALGRLK*KRSLEP
Trigger: GGGCTCAAGCGATCTTTTCCACTTCAGCCTCCCGAG...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATCCTGGTGACACTTGCTaGCCTGGTTTTTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENPGDTC*PGFYSL
Trigger: CAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGG...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTTCCAATATCAAGCACTaGAGCATCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCSNIKH*SIQWNL
Trigger: AAGATTCCACTGGATGCTTCAGTGCTTGATATTGGA...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp GCATTTATTTGCACAAGGATTTTCTGTGTCAGGTTAACTTTGCTGTGTAGATTCATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AFICTRIFCVRLTLLCRFICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...GAATCTACACAGCAAAGTTAACCTGACACAGAAAATCCTTGTGCAAATAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000495711.2
ENST00000652548.1
CDS-3UTR TCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTAAAGCAGCAATTCCGTaGAGGCTCCACAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLKAAIP*RLHREI
Trigger: GATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTT...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp AGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTGGATAAATGTGAATTaGGGTCAACATACAGTACCA +
Preference number: 4 (lower is better)
Translates to: SSNSVKAPQRNRVCISNKWINVN*GQHTVP
Trigger: TGGTACTGTATGTTGACCTCAATTCACATTTATCCA...CTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR TCA 90 bp TCATGGGTCTCCAGCTGTACTGTAAATGCTACAAAGGCAAAGACTAAGCACCTGAGCAGGATAGGATATTaGTACATTCATGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: SWVSSCTVNATKAKTKHLSRIGY*YIHVLG
Trigger: TCCTAAGACATGAATGTATCAATATCCTATCCTGCT...CAGGTGCTTAGTCTTTGCCTTTGTAGCATTTACAGTACAGCTGGAGACCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp TCATGGGTCTCCAGCTGTACTGTAAATGCTACAAAGGCAAAGACTAAGCACCTGTCCAGAAAGCTGAATTaGAGAAGGAGAGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: SWVSSCTVNATKAKTKHLSRKLN*RRRVIN
Trigger: ATTGATTACTCTCCTTCTGCAATTCAGCTTTCTGGA...CAGGTGCTTAGTCTTTGCCTTTGTAGCATTTACAGTACAGCTGGAGACCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATAGTTCAAATCTAAAATaGCAACGAGGGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENSSNLK*QRGPGM
Trigger: CATGCCAGGCCCTCGTTGGCATTTTAGATTTGAACT...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR GCA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGACCATAGCTGCAAAATaGAGGCTTGATAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSTIAAK*RLDNLS
Trigger: GCTCAAGTTATCAAGCCTGCATTTTGCAGCTATGGT...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATGAACCTGGTGACACTTaGTGGCCTGGTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: HQSSILYSTCASCVLTKHEPGDT*WPGFYS
Trigger: ACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp TCATGGGTCTCCAGCTGTACTGTAAATGCTACAAAGGCAAAGACTAAGCACCTGAGAGAAACCAAATTTTaGCAACAAGTTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SWVSSCTVNATKAKTKHLRETKF*QQVQPG
Trigger: TCCTGGTTGAACTTGTTGGCAAAATTTGGTTTCTCT...CAGGTGCTTAGTCTTTGCCTTTGTAGCATTTACAGTACAGCTGGAGACCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR CCA 90 bp AGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTAGCAACTCTTCCTTaGTCCAATTACATGACGTTA +
Preference number: 4 (lower is better)
Translates to: SSNSVKAPQRNRVCISNKLATLP*SNYMTL
Trigger: TAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAA...CTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCACCTGGTGACACTTGCTaGCCTGGTTTTTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: TYCFLFSIALSGLRLMASPGDTC*PGFYSL
Trigger: CAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGG...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR CCA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACCCAGGGCTCTCCCCTaGAGACAAACTGTTCACATT +
Preference number: 4 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLPRALP*RQTVHI
Trigger: AATGTGAACAGTTTGTCTCCAGGGGAGAGCCCTGGG...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATCATTTATGTAGCCTGTaGGCTTGGGTATTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENHLCSL*AWVFVC
Trigger: GCAGACAAATACCCAAGCCCACAGGCTACATAAATG...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
3UTR CAA 72 bp ATGGCTTTAGTCAGGCTGCCAAGAGTGATATCAGGTTaGATTCTCACATACATAAATGCCAGTCCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MALVRLPRVISG*ILTYINASPKK
Trigger: CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGGCAGCCTGACTAAAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGTCCAATATCAAGCACTaGAGCATCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQSNIKH*SIQWNL
Trigger: AAGATTCCACTGGATGCTTCAGTGCTTGATATTGGA...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTAATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAATCTGCCTCCAAAGCTaGACTTGGGTGTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQICLQS*TWVLVA
Trigger: AGCTACCAACACCCAAGTTCAGCTTTGGAGGCAGAT...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAAAAAGCAGCAATTCCGTaGAGGCTCCACAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: KNDKILNRGKSLSREMGKKAAIP*RLHREI
Trigger: GATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTT...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp GCATTTATTTGCACAAGGATTTTCTGTGTCAGGTTAACTTTGCTGTGTAGATTCAAAGCAGCAATTCCGTaGAGGCTCCACAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: AFICTRIFCVRLTLLCRFKAAIP*RLHREI
Trigger: GATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTT...GAATCTACACAGCAAAGTTAACCTGACACAGAAAATCCTTGTGCAAATAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp TCCGTGAAGGCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAATCCAGAAAGCTGAATTaGAGAAGGAGAGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: SVKAPQRNRVCISNKFPQSRKLN*RRRVIN
Trigger: ATTGATTACTCTCCTTCTGCAATTCAGCTTTCTGGA...TTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGCCTTCACGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATAATTCCCTTTGGACTTaGACACGCACTTCCTACACA +
Preference number: 4 (lower is better)
Translates to: HQSSILYSTCASCVLTKHNSLWT*TRTSYT
Trigger: TGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATT...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp GCATTTATTTGCACAAGGATTTTCTGTGTCAGGTTAACTTTGCTGTGTAGATTCGTGCACCACAAAGTATaGGTTGTGAGCCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AFICTRIFCVRLTLLCRFVHHKV*VVSLSP
Trigger: AGGACTTAGGCTCACAACCCATACTTTGTGGTGCAC...GAATCTACACAGCAAAGTTAACCTGACACAGAAAATCCTTGTGCAAATAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATGGAACACAAGACACTTaGTCTCATACTCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENGTQDT*SHTLKA
Trigger: TGCTTTGAGAGTATGAGACCAAGTGTCTTGTGTTCC...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR TCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATTTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AATGGCTTTAGTCAGGCTGCCAAGAGTGATATCAGGTTTGATTCTCACATACATCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: NGFSQAAKSDIRFDSHIHLPLLN*IVRIKA
Trigger: AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...ATGTATGTGAGAATCAAACCTGATATCACTCTTGGCAGCCTGACTAAAGCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAAACAGAGTTGGCTGACTaGTATTCTGATACTCCACAG +
Preference number: 4 (lower is better)
Translates to: KNDKILNRGKSLSREMGKTELAD*YSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGT...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp ACATTAGCTAAAGAGGTTACTACTGTGGAACACAAGACACTTGGTCTCATACTCATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TLAKEVTTVEHKTLGLILIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...GAGTATGAGACCAAGTGTCTTGTGTTCCACAGTAGTAACCTCTTTAGCTAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp TGTATTTATGGTTTGTTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACTTAGCAACTCTTCCTTaGTCCAATTACATGACGTTA +
Preference number: 4 (lower is better)
Translates to: CIYGLFQEPGDTCWPGFYLATLP*SNYMTL
Trigger: TAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAA...GTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAACAAACCATAAATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGAAGAGGTTACTACTGTaGAACACAAGACACTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRVISGLILTYINASPKKKRLLL*NTRHLV
Trigger: GACCAAGTGTCTTGTGTTCCACAGTAGTAACCTCTT...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR TCA 90 bp TTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTCCAATATCAAGCACTaGAGCATCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: FLSPIQYTLFNMCILCTYSNIKH*SIQWNL
Trigger: AAGATTCCACTGGATGCTTCAGTGCTTGATATTGGA...GTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGTTGTCAATACAAATATaGAATCCAGACAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQLSIQI*NPDSCV
Trigger: CACACAGCTGTCTGGATTTCATATTTGTATTGACAA...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCTTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: FHILLPLLNCIVRIKAYGFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...GCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR TCA 90 bp CTCTTTTACAGTGGTATCAGCATGACAAAAGTACATTCTGCCAGCCTATACATTTTCTGTGTAGCTACCTaGATTCGTCCAAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LFYSGISMTKVHSASLYIFCVAT*IRPRKS
Trigger: ACTTTTTCTTGGACGAATTCAGGTAGCTACACAGAA...AATGTATAGGCTGGCAGAATGTACTTTTGTCATGCTGATACCACTGTAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR TCA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAAGCAGGCTTGATAACTTaGGCAACTGATACATTTCTC +
Preference number: 4 (lower is better)
Translates to: TSQSSHTESLVCRISTLKAGLIT*ATDTFL
Trigger: GAGAAATGTATCAGTTGCTCAAGTTATCAAGCCTGC...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATGACAAAAGTACATTCTGCCAGCCTATACATTTCAGTTTTTGAAGTCCTACTCACTTTAGGGCTCAACTaGTCTCCTAGTTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: MTKVHSASLYISVFEVLLTLGLN*SPSLSL
Trigger: GAGACTTAAACTAGGAGATCAGTTGAGCCCTAAAGT...GAGTAGGACTTCAAAAACTGAAATGTATAGGCTGGCAGAATGTACTTTTGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLLPLLN*IVRIKA
Trigger: AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCACTTCCTCTTCTCAATTaGATTGTCAGGATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TYCFLFSIALSGLRLMASLPLLN*IVRIKA
Trigger: AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR GCA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTAGTTCAAATCTAAAATaGCAACGAGGGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: TSFLKVSVFRLNEITIPASSNLK*QRGPGM
Trigger: CATGCCAGGCCCTCGTTGGCATTTTAGATTTGAACT...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR GCA 90 bp GCATTTATTTGCACAAGGATTTTCTGTGTCAGGTTAACTTTGCTGTGTAGATTCACCATAGCTGCAAAATaGAGGCTTGATAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: AFICTRIFCVRLTLLCRFTIAAK*RLDNLS
Trigger: GCTCAAGTTATCAAGCCTGCATTTTGCAGCTATGGT...GAATCTACACAGCAAAGTTAACCTGACACAGAAAATCCTTGTGCAAATAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAACAGAGTTGGCTGACTaGTATTCTGATACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQTELAD*YSDTPQ
Trigger: CTGTGGAGTATCAGAATAGCAGTCAGCCAACTCTGT...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAATCTTTCAGCCATATATaGTCTTCACCTCCCACAATC +
Preference number: 4 (lower is better)
Translates to: KNDKILNRGKSLSREMGKSFSHI*SSPPTI
Trigger: GATTGTGGGAGGTGAAGAGCATATATGGCTGAAAGA...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATGCTAGGCAAGTAATTTaGAAATACTTTAGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENARQVI*KYFRAQ
Trigger: TTGAGCCCTAAAGTATTTGCAAATTACTTGCCTAGC...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp GAGAGATTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ERFHILLPLLNCIVRIKAIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CCA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAGATATGAGACAGAGTTaGCTGACTGCTATTCTGATA +
Preference number: 4 (lower is better)
Translates to: FVLVLVPKKLASSRIRVIDMRQS*LTAILI
Trigger: TATCAGAATAGCAGTCAGCCAACTCTGTCTCATATC...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTTTTGTATTTGTTAATTaGGATAACCCACCCATTCAG +
Preference number: 4 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCFVFVN*DNPPIQ
Trigger: CTGAATGGGTGGGTTATCCCAATTAACAAATACAAA...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp ATACATAAATGCCAGTCCCAAAAAGCAACTCTAACTTGTGCACCTGGCTTAAAACGTCTTTCGATTAAATaGAATCACAATTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IHKCQSQKATLTCAPGLKRLSIK*NHNSSF
Trigger: GAAGCTGGAATTGTGATTTCATTTAATCGAAAGACG...TTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTTTGGGACTGGCATTTATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR TCA 90 bp TTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCCGTCTTTCGATTAAATaGAATCACAATTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FHILLPLLNCIVRIKAYGRLSIK*NHNSSF
Trigger: GAAGCTGGAATTGTGATTTCATTTAATCGAAAGACG...GCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR GCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTTTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTGCTTGGGTATTTGTCTaGTTGATGTTGAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLAWVFV*LMLSFI
Trigger: AATGAAACTCAACATCAAGCAGACAAATACCCAAGC...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAAATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSQSSHTESLVCRISTLKIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCATTAGCAACTCTTCCTTaGTCCAATTACATGACGTTA +
Preference number: 4 (lower is better)
Translates to: TYCFLFSIALSGLRLMASLATLP*SNYMTL
Trigger: TAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAA...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CCA 90 bp ACATTAGCTAAAGAGGTTACTACTGTGGAACACAAGACACTTGGTCTCATACTCAAGTCTCTTTTACAGTaGTATCAGCATGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: TLAKEVTTVEHKTLGLILKSLLQ*YQHDKS
Trigger: ACTTTTGTCATGCTGATACCACTGTAAAAGAGACTT...GAGTATGAGACCAAGTGTCTTGTGTTCCACAGTAGTAACCTCTTTAGCTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR TCA 90 bp GCATTTATTTGCACAAGGATTTTCTGTGTCAGGTTAACTTTGCTGTGTAGATTCCGTCTTTCGATTAAATaGAATCACAATTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AFICTRIFCVRLTLLCRFRLSIK*NHNSSF
Trigger: GAAGCTGGAATTGTGATTTCATTTAATCGAAAGACG...GAATCTACACAGCAAAGTTAACCTGACACAGAAAATCCTTGTGCAAATAAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAATCCAGAAAGCTGAATTaGAGAAGGAGAGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: KNDKILNRGKSLSREMGKSRKLN*RRRVIN
Trigger: ATTGATTACTCTCCTTCTGCAATTCAGCTTTCTGGA...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp ATACATAAATGCCAGTCCCAAAAAGCAACTCTAACTTGTGCACCTGGCTTAAAAAGAGATTTCACATATTaGTTCCTCTTCTCAATTGCA +
Preference number: 4 (lower is better)
Translates to: IHKCQSQKATLTCAPGLKRDFTY*FLFSIA
Trigger: TGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCT...TTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTTTGGGACTGGCATTTATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTAGAGATTTCACATATTaGTTCCTCTTCTCAATTGCA +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLRDFTY*FLFSIA
Trigger: TGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCT...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAAGACAAAAGTACATTCTaGCAGCCTATACATTTCAGT +
Preference number: 4 (lower is better)
Translates to: KNDKILNRGKSLSREMGKDKSTF*QPIHFS
Trigger: ACTGAAATGTATAGGCTGGCAGAATGTACTTTTGTC...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CCA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTATCCAGACAGCTGTGTaGAGAGATTCAAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSFLKVSVFRLNEITIPAIQTAV*RDSKSL
Trigger: AAGACTTTTTGAATCTCTCCACACAGCTGTCTGGAT...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTTTTGTATTTGTTAATTaGGATAACCCACCCATTCAG +
Preference number: 4 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLFVFVN*DNPPIQ
Trigger: CTGAATGGGTGGGTTATCCCAATTAACAAATACAAA...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CCA 90 bp CTTGATGTTGAGTTTCATTTCTATGCCCTGAACATAGGAATCCATCAATTGACCTTTGTATTTGTTAATTaGGATAACCCACCCATTCAG +
Preference number: 4 (lower is better)
Translates to: LDVEFHFYALNIGIHQLTFVFVN*DNPPIQ
Trigger: CTGAATGGGTGGGTTATCCCAATTAACAAATACAAA...GGTCAATTGATGGATTCCTATGTTCAGGGCATAGAAATGAAACTCAACATCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR GCA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAAAGAGAAACCAAATTTTaGAAGTTCAACCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TSQSSHTESLVCRISTLKRETKF*KFNQEN
Trigger: GTTTTCCTGGTTGAACTTGCAAAATTTGGTTTCTCT...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000652548.1
CDS-3UTR GCA 90 bp CCTTCACTGAATTCATTTAGCAACTCTTCCTTGGTCCAATTACATGACGTTATTAGAGATTTCACATATTaGTTCCTCTTCTCAATTGCA +
Preference number: 4 (lower is better)
Translates to: PSLNSFSNSSLVQLHDVIRDFTY*FLFSIA
Trigger: TGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCT...AATAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAATGAATTCAGTGAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR GCA 90 bp TTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACAGAGATTTCACATATTaGTTCCTCTTCTCAATTGCA +
Preference number: 4 (lower is better)
Translates to: FLSPIQYTLFNMCILCTYRDFTY*FLFSIA
Trigger: TGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCT...GTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR GCA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTATTTTTGGAAAACCAATaGTGCTACACTGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLFLENQ*CYTVSR
Trigger: TCTGGAAACAGTGTAGCAGCATTGGTTTTCCAAAAA...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCATCCCCGGGACTGCCCTaGTCCGACCGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: TYCFLFSIALSGLRLMASSPGLP*SDRAAT
Trigger: GGTGGCGGCGCGGTCGGACAAGGGCAGTCCCGGGGA...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CAA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGTCCCCGGGACTGCCCTaGTCCGACCGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: PRVISGLILTYINASPKKSPGLP*SDRAAT
Trigger: GGTGGCGGCGCGGTCGGACAAGGGCAGTCCCGGGGA...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAATCCCCGGGACTGCCCTaGTCCGACCGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: TSQSSHTESLVCRISTLKSPGLP*SDRAAT
Trigger: GGTGGCGGCGCGGTCGGACAAGGGCAGTCCCGGGGA...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTTCCCCGGGACTGCCCTaGTCCGACCGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: TSFLKVSVFRLNEITIPASPGLP*SDRAAT
Trigger: GGTGGCGGCGCGGTCGGACAAGGGCAGTCCCGGGGA...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp CTGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCCAGCTGGGCCAGCATaGTGCACCACAAAGTATGGG +
Preference number: 5 (lower is better)
Translates to: LLSKLAGAENTANVTLATPAGPA*CTTKYG
Trigger: CCCATACTTTGTGGTGCACAATGCTGGCCCAGCTGG...AGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp CTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTAGTGGAAAAGATCGCTaGAGCCCAGGAAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LNSLWTCTRTSYTQKWPVSGKDR*SPGSQG
Trigger: GCCTTGACTTCCTGGGCTCAAGCGATCTTTTCCACT...AACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CAA 90 bp CTTTGGACTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAACCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LWTCTRTSYTQKWPVMQQPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...TTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ACACAAACCCTGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: TQTLLSKLAGAENTANVTPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...CGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp GTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTTCTCAGCAAATGTCACGCTaGCAACTCACTGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLKTQQMSRLQLTGGKSSQQMSR*QLTGGK
Trigger: CTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTG...AGAACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp CAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCCAAAAACAGGAAGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: QRAVQEHIHVSLQSQKQEASSGI*CFCIHL
Trigger: AAGGTGGATGCAGAAACACAAGATTCCACTGGATGC...TTCCTGTTTTTGGCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTCAATTCCCTTTGGACTaGCACACGCACTTCCTACAC +
Preference number: 5 (lower is better)
Translates to: IQASIPFGLAHALPTHRSQFPLD*HTHFLH
Trigger: GTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTG...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AGCATTGTGCACCACAAAGTATGGGTTGTGAGCCTAAGTCCTGAACACAAACCCACCCTGCTTTCCAAGTaGGCAGGTGCTGAAAACACA +
Preference number: 5 (lower is better)
Translates to: SIVHHKVWVVSLSPEHKPTLLSK*AGAENT
Trigger: TGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGT...GGGTTTGTGTTCAGGACTTAGGCTCACAACCCATACTTTGTGGTGCACAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp ACACAAACCCTGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGGACTGTCTAGCACCATaGAGGTACGAAAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: TQTLLSKLAGAENTANVTDCLAP*RYESMP
Trigger: TGGCATGCTTTCGTACCTCAATGGTGCTAGACAGTC...CGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAGGGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp ATACTCTCAAAGCAGAGGGCTGTCCAGGAGCACATACACGTTAGCTTACAGAGCAATAGAGGCAAGTCTTaGAGTAGGGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ILSKQRAVQEHIHVSLQSNRGKS*SREMGK
Trigger: TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATT...GCTCTGTAAGCTAACGTGTATGTGCTCCTGGACAGCCCTCTGCTTTGAGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGAGTGGAAAAGATCGCTaGAGCCCAGGAAGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSSGKDR*SPGSQG
Trigger: GCCTTGACTTCCTGGGCTCAAGCGATCTTTTCCACT...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000466270.5
CDS-3UTR CAA 90 bp GCTCCACAGAGAAATCGCGTTTGCATTTCAAACAAGTTTCCTCAAAGTAAGCGTCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: APQRNRVCISNKFPQSKRPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...ACGCTTACTTTGAGGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTCCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTAGAAAACCTTCACCTTaGCAAATGGCACTAACATGC +
Preference number: 5 (lower is better)
Translates to: IQASIPFGLAHALPTHRSRKPSP*QMALTC
Trigger: GCATGTTAGTGCCATTTGCAAAGGTGAAGGTTTTCT...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AATGGCTTTAGTCAGGCTGCCAAGAGTGATATCAGGTTTGATTCTCACATACATAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTC +
Preference number: 5 (lower is better)
Translates to: NGFSQAAKSDIRFDSHIHRPQFP*DLHTHF
Trigger: GAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCT...ATGTATGTGAGAATCAAACCTGATATCACTCTTGGCAGCCTGACTAAAGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ATTCAGGCCTCAATTCCCTTTGGACTTGCACACGCACTTCCTACACACAGAAGTTTCCCCACTATGCAATaGTCTTTCAGCCATATATGC +
Preference number: 5 (lower is better)
Translates to: IQASIPFGLAHALPTHRSFPTMQ*SFSHIC
Trigger: GCATATATGGCTGAAAGACAATTGCATAGTGGGGAA...ACTTCTGTGTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp CAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTCACTGGAGGGAAGAGTAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: QVLKTQQMSRLQLTGGKSKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...ACTCTTCCCTCCAGTGAGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp CTGCTTTCCAAGTTGGCAGGTGCTGAAAACACAGCAAATGTCACGCTTGCAACTTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: LLSKLAGAENTANVTLATCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...AGTTGCAAGCGTGACATTTGCTGTGTTTTCAGCACCTGCCAACTTGGAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495711.2
CDS-3UTR CAA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATAGAAAACCTTCACCTTaGCAAATGGCACTAACATGC +
Preference number: 5 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHRKPSP*QMALTC
Trigger: GCATGTTAGTGCCATTTGCAAAGGTGAAGGTTTTCT...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TCATGGGTCTCCAGCTGTACTGTAAATGCTACAAAGGCAAAGACTAAGCACCTGAGAAAACCTTCACCTTaGCAAATGGCACTAACATGC +
Preference number: 5 (lower is better)
Translates to: SWVSSCTVNATKAKTKHLRKPSP*QMALTC
Trigger: GCATGTTAGTGCCATTTGCAAAGGTGAAGGTTTTCT...CAGGTGCTTAGTCTTTGCCTTTGTAGCATTTACAGTACAGCTGGAGACCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATCAATTCCCTTTGGACTaGCACACGCACTTCCTACAC +
Preference number: 5 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENQFPLD*HTHFLH
Trigger: GTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTG...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGGCCTCAATTCCCTTaGGACTTGCACACGCACTTC +
Preference number: 5 (lower is better)
Translates to: FVLVLVPKKLASSRIRVIRPQFP*DLHTHF
Trigger: GAAGTGCGTGTGCAAGTCCAAAGGGAATTGAGGCCT...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp CTTGCACACGCACTTCCTACACACAGAAGTGGCCTGTTATGCAGCAATAATCATTTTAGCAACTCTTCCTaGGTCCAATTACATGACGTT +
Preference number: 5 (lower is better)
Translates to: LAHALPTHRSGLLCSNNHFSNSS*VQLHDV
Trigger: AACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAA...ATGATTATTGCTGCATAACAGGCCACTTCTGTGTGTAGGAAGTGCGTGTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp GAGAGATTTCACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTCAATTCCCTTTGGACTaGCACACGCACTTCCTACAC +
Preference number: 5 (lower is better)
Translates to: ERFHILLPLLNCIVRIKAQFPLD*HTHFLH
Trigger: GTGTAGGAAGTGCGTGTGCAAGTCCAAAGGGAATTG...AGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGTGAAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR CAA 90 bp CTGCCTCCAAAGCTGAACTTGGGTGTTGGTAGCTCTTCGAGAAGTTCAAATCTAAAAAGCAACTCTAACTaGTGCACCTGGCTTAAAACA +
Preference number: 5 (lower is better)
Translates to: LPPKLNLGVGSSSRSSNLKSNSN*CTWLKT
Trigger: TGTTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTT...TAGATTTGAACTTCTCGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466270.5
CDS-3UTR CAA 90 bp GTATTTATGGTTTGTTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACATTACTGGAGCCCATCTaGACATCTAAGCTGGAAATG +
Preference number: 5 (lower is better)
Translates to: VFMVCFRNLVTLAGLVFTLLEPI*TSKLEM
Trigger: CATTTCCAGCTTAGATGTCAAGATGGGCTCCAGTAA...TGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAACAAACCATAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp CACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTAAGCATGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: HQSSILYSTCASCVLTKHASSGI*CFCIHL
Trigger: AAGGTGGATGCAGAAACACAAGATTCCACTGGATGC...ATGCTTAGTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACCTCCAAAGCTGAACTaGGGTGTTGGTAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLPPKLN*GVGSSS
Trigger: CGAAGAGCTACCAACACCCAAGTTCAGCTTTGGAGG...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp GAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTGAAAATAATAGAGGCAAGTCTTaGAGTAGGGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: EPGDTCWPGFYSLVLCENNRGKS*SREMGK
Trigger: TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATT...ATTTTCACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGATATTCTCGGAAAGTTaGCAGTTCTCTCTCATAGAC +
Preference number: 5 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSIFSES*QFSLID
Trigger: GTCTATGAGAGAGAACTGCAAACTTTCCGAGAATAT...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AGCAATAATCATAGTGAAAAGCAGCAATTCCGTGAAGGCTCCACAGAGAAATCGAAAAGCAACTCTAACTaGTGCACCTGGCTTAAAACA +
Preference number: 5 (lower is better)
Translates to: SNNHSEKQQFREGSTEKSKSNSN*CTWLKT
Trigger: TGTTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTT...CGATTTCTCTGTGGAGCCTTCACGGAATTGCTGCTTTTCACTATGATTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTCTGGATAAATGTGAATaGAGGTCAACATACAGTACC +
Preference number: 5 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCLDKCE*RSTYST
Trigger: GGTACTGTATGTTGACCTCAATTCACATTTATCCAG...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTCAGGAACCTGGTGACACTTGCTGGCCTGGTTTTTACAGTTTGGTATTATGTAACACTCCAGGGATTTaGCTAAGGTCATATTCAATC +
Preference number: 5 (lower is better)
Translates to: FQEPGDTCWPGFYSLVLCNTPGI*LRSYSI
Trigger: GATTGAATATGACCTTAGCAAAATCCCTGGAGTGTT...ACATAATACCAAACTGTAAAAACCAGGCCAGCAAGTGTCACCAGGTTCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp ACAAGTTTCCTCAAAGTAAGCGTCTTTCGATTAAATGAAATCACAATTCCAGCTGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: TSFLKVSVFRLNEITIPAASSGI*CFCIHL
Trigger: AAGGTGGATGCAGAAACACAAGATTCCACTGGATGC...AGCTGGAATTGTGATTTCATTTAATCGAAAGACGCTTACTTTGAGGAAACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTAGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTT +
Preference number: 5 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLASSGI*CFCIHL
Trigger: AAGGTGGATGCAGAAACACAAGATTCCACTGGATGC...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ATCTTTGTGCATGTATCGCTGAGGGCTTATATAACTTACACTACCCTTTCACAGACAGAGAAATCGCGTTaGCATTTCAAACAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: IFVHVSLRAYITYTTLSQTEKSR*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGT...CTGTGAAAGGGTAGTGTAAGTTATATAAGCCCTCAGCGATACATGCACAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTGGAACACAAGACACTaGGTCTCATACTCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: FLSPIQYTLFNMCILCTYWNTRH*VSYSQS
Trigger: GCTTTGAGAGTATGAGACCAAGTGTCTTGTGTTCCA...GTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS-3UTR CAA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGTTTAGCAACTCTTCCTaGGTCCAATTACATGACGTT +
Preference number: 5 (lower is better)
Translates to: PRVISGLILTYINASPKKFSNSS*VQLHDV
Trigger: AACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAA...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp ACATATTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGGCTTATGGCATCATGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: TYCFLFSIALSGLRLMASCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...TGATGCCATAAGCCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAATATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CAA 90 bp CCAAGAGTGATATCAGGTTTGATTCTCACATACATAAATGCCAGTCCCAAAAAGTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: PRVISGLILTYINASPKKCVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...CTTTTTGGGACTGGCATTTATGTATGTGAGAATCAAACCTGATATCACTCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAAATAGAGGCAAGTCTTaGAGTAGGGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQNRGKS*SREMGK
Trigger: TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATT...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTGTTCTGGTTTTAGTCCCTAAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAACAGAGAAATCGCGTTaGCATTTCAAACAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: FVLVLVPKKLASSRIRVITEKSR*HFKQVS
Trigger: GGAAACTTGTTTGAAATGCAAACGCGATTTCTCTGT...TATTACTCTAATCCTGCTGGAAGCTAGCTTCTTAGGGACTAAAACCAGAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTACTTTAGCAACTCTTCCTaGGTCCAATTACATGACGTT +
Preference number: 5 (lower is better)
Translates to: FLSPIQYTLFNMCILCTYFSNSS*VQLHDV
Trigger: AACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAA...GTAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AAGAATGACAAAATTCTTAATAGAGGCAAGTCTTTGAGTAGGGAGATGGGGAAATTTAGCAACTCTTCCTaGGTCCAATTACATGACGTT +
Preference number: 5 (lower is better)
Translates to: KNDKILNRGKSLSREMGKFSNSS*VQLHDV
Trigger: AACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAA...TTTCCCCATCTCCCTACTCAAAGACTTGCCTCTATTAAGAATTTTGTCATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp AAGAAGCTAGCTTCCAGCAGGATTAGAGTAATAAGAAGAGATGACAACTTCCTTAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: KKLASSRIRVIRRDDNFLKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...AAGGAAGTTGTCATCTCTTCTTATTACTCTAATCCTGCTGGAAGCTAGCTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp CCTTCACTGAATTCATTTAGCAACTCTTCCTTGGTCCAATTACATGACGTTATTTGTGTCAGGTTAACTTaGCTGTGTAGATTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: PSLNSFSNSSLVQLHDVICVRLT*LCRFCV
Trigger: TACACAGAATCTACACAGCAAAGTTAACCTGACACA...AATAACGTCATGTAATTGGACCAAGGAAGAGTTGCTAAATGAATTCAGTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CAA 90 bp TCAATTGCATTGTCAGGATTAAGGCTTATGGCATCAAAAGTCCCTTTGTCAATAAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: SIALSGLRLMASKVPLSIKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...TATTGACAAAGGGACTTTTGATGCCATAAGCCTTAATCCTGACAATGCAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000464099.5
ENST00000466270.5
CDS-3UTR CAA 90 bp ACATCTCAGTCTAGTCACACAGAAAGCCTAGTTTGTAGGATTAGCACATTAAAAAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: TSQSSHTESLVCRISTLKKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...TTTTAATGTGCTAATCCTACAAACTAGGCTTTCTGTGTGACTAGACTGAGATGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTAAAAAGCAACTCTAACTaGTGCACCTGGCTTAAAACA +
Preference number: 5 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLKSNSN*CTWLKT
Trigger: TGTTTTAAGCCAGGTGCACAAGTTAGAGTTGCTTTT...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368836.7
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp TTTTCTTTCACCAATCCAGTATACTCTATTCAACATGTGCATCCTGTGTACTTAAAAGTCTCACATTTTTaGGAAAACCAATGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: FSFTNPVYSIQHVHPVYLKVSHF*ENQCCY
Trigger: GTAGCAGCATTGGTTTTCCAAAAAATGTGAGACTTT...TAAGTACACAGGATGCACATGTTGAATAGAGTATACTGGATTGGTGAAAGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS-3UTR CAA 90 bp CTCAGCTTCATTTTCCTTATACGTAGAAACAAGAACAAGCAATACATACCTCAAAAGCAGGATAGGATATaGATACATTCATGTCTTAGG +
Preference number: 5 (lower is better)
Translates to: LSFIFLIRRNKNKQYIPQKQDRI*IHSCLR
Trigger: CCTAAGACATGAATGTATCAATATCCTATCCTGCTT...TTGAGGTATGTATTGCTTGTTCTTGTTTCTACGTATAAGGAAAATGAAGCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652548.1
CDS GCA 72 bp CCAGCGCCGACGGGACGAAACCGTCCTCCCCGGGACTaGCCTTGTCCGACCGCGCCGCCACCGCAGCGCCAC +
Preference number: 6 (lower is better)
Translates to: PAPTGRNRPPRD*PCPTAPPPQRH
Trigger: GTGGCGCTGCGGTGGCGGCGCGGTCGGACAAGGGCAGTCCCGGGGAGGACGGTTTCGTCCCGTCGGCGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS CCA 72 bp CGCCGTCAGCGCCCGAGCTCATTTCGCTCCACGTCCTaGACGGCCGTTGGGGCCGCCATAGAGACGGGGCAC +
Preference number: 6 (lower is better)
Translates to: RRQRPSSFRSTS*TAVGAAIETGH
Trigger: GTGCCCCGTCTCTATGGCGGCCCCAACGGCCGTCCAGGACGTGGAGCGAAATGAGCTCGGGCGCTGACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368836.7
ENST00000652548.1
CDS CAA 90 bp TTCTCCAAACCAGATTTCACCTGTATCTCCATATTCTCGGAAAGTTaGCAGTTCTCTCTCATAGACAGCATCCCAATGCTCGCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: FSKPDFTCISIFSES*QFSLIDSIPMLAGP
Trigger: GGGACCCGCGAGCATTGGGATGCTGTCTATGAGAGAGAACTGCAAACTTTCCGAGAATATGGAGATACAGGTGAAATCTGGTTTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS TCA 72 bp CAGGAAAACACCATTTCCAGTTCCAATATCAAGCACTaGAGCATCCAGTGGAATCTTGTGTTTCTGCATCCA +
Preference number: 6 (lower is better)
Translates to: QENTISSSNIKH*SIQWNLVFLHP
Trigger: TGGATGCAGAAACACAAGATTCCACTGGATGCTTCAGTGCTTGATATTGGAACTGGAAATGGTGTTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS CAA 90 bp CCATTTCCAGTTCCAATATCAAGCACTGAAGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTTATTAGTCGATTCATACTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PFPVPISSTEASSGI*CFCIHLISRFILSS
Trigger: AGAAGAGAGTATGAATCGACTAATAAGGTGGATGCAGAAACACAAGATTCCACTGGATGCTTCAGTGCTTGATATTGGAACTGGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1
CDS CAA 72 bp GTTCCAATATCAAGCACTGAAGCATCCAGTGGAATCTaGTGTTTCTGCATCCACCTTATTAGTCGATTCATA +
Preference number: 6 (lower is better)
Translates to: VPISSTEASSGI*CFCIHLISRFI
Trigger: TATGAATCGACTAATAAGGTGGATGCAGAAACACAAGATTCCACTGGATGCTTCAGTGCTTGATATTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368836.7
ENST00000464099.5
ENST00000466270.5
ENST00000652548.1