RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECSIT (Homo sapiens)

Ensembl gene IDs: ENSG00000130159

Ensembl transcript IDs: ENST00000252440.11, ENST00000270517.12, ENST00000417981.6, ENST00000585318.5, ENST00000588998.5, ENST00000590480.1, ENST00000591104.5, ENST00000591352.1, ENST00000592312.5, ENST00000592571.1, ENST00000592665.1, ENST00000593231.1

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATC +
Preference number: 1 (lower is better)
Translates to: WSSGRGGSSSPAEDV*SSRVDPARRKTTGI
Trigger: GATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR GCA 90 bp GTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAA +
Preference number: 1 (lower is better)
Translates to: VFFLVVLGQGRLLQP*RGCLELPGGPGEAE
Trigger: TTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CCA 90 bp GGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTaGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGC +
Preference number: 1 (lower is better)
Translates to: GGPGEAEDHGDLGQG*VGLLQALDPLSHRR
Trigger: GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CCA 90 bp TGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTA +
Preference number: 1 (lower is better)
Translates to: WSSRVDPARRKTTGI*ARVGLVSCRPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CCA 90 bp GCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTaGATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGACTCTGGAT +
Preference number: 1 (lower is better)
Translates to: AEPQGEGALNKDRPG*IVAGQGGLLIGTLD
Trigger: ATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
3UTR CCA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGAGGATGTC +
Preference number: 1 (lower is better)
Translates to: LWPCCCRCRLSSSSW*SSGRGGSSSPAEDV
Trigger: GACATCCTCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CCA 90 bp GGCGGGCCAGGGCGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTaGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: GGPGRPADRDSGFLV*RHTCPVPCKGLGPE
Trigger: CTCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR CCA 90 bp ATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGACTCTGGATTCCTaGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGCC +
Preference number: 1 (lower is better)
Translates to: IVAGQGGLLIGTLDS*CGDIHALCPARDSA
Trigger: GGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCCACAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR TCA 90 bp GTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACT +
Preference number: 1 (lower is better)
Translates to: VSCRPWIHLAIVAWS*APAMHMAKTGPSST
Trigger: AGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR TCA 90 bp ACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGT +
Preference number: 1 (lower is better)
Translates to: TKTGRAGLWRARAAC*SGLWIPGVETYMPC
Trigger: ACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPASPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp CCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: PGWTRRGGRPRGSGPGLGRLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...ACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp ACAGCCCGTGCCCTCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTTGGAGGGGTCTCGCCTaGCCATCGCTGGCAGCCCGA +
Preference number: 2 (lower is better)
Translates to: TARALAPAQTSSGPAAVAWRGLA*PSLAAR
Trigger: TCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCA...AGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGAGGGCACGGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp GGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: GPSTKTGRAGLWRARAACGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...GCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTG +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPAGSPRS*GGDAIL
Trigger: CAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: SRVDPARRKTTGIWARVGHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: APADSGGVSPAHRWQPEISPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
3UTR CAA 90 bp GACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGG +
Preference number: 2 (lower is better)
Translates to: DPARRKTTGIWARVG*VSCRPWIHLAIVAW
Trigger: CCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp GGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCGACATACATGCCCTGTaGCCTGCAAGGGACTCGGCC +
Preference number: 2 (lower is better)
Translates to: GPSTKTGRAGLWRARAACDIHAL*PARDSA
Trigger: GGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTC...GCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPASKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp TGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: CCRCRLSSSSWWSSGRGGPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp GCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AEPQGEGALNKDRPGWIVSPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...CACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: APADSGGVSPAHRWQPEIHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTATCCTGGGGAGGGGATaGCATACTGCTAGAGATGAG +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPAILGRG*HTARDE
Trigger: CTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGAT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp TGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: CCCRCRLSSSSWWSSGRGGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp TGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: CRCRLSSSSWWSSGRGGSHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...GGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp GTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 2 (lower is better)
Translates to: VVVFFLVVLGQGRLLQPCVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...GCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp TGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: CCRCRLSSSSWWSSGRGGKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: LLSLQVVVFFLVVLGQGRKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...CCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR TCA 90 bp GCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 2 (lower is better)
Translates to: ARVGLVSCRPWIHLAIVAIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp GGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 2 (lower is better)
Translates to: GCRLLPGGPRAGAAPPALVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...CAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp GCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 2 (lower is better)
Translates to: AEPQGEGALNKDRPGWIVRSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...CACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CCA 90 bp GCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 2 (lower is better)
Translates to: AVAAGCRLLPGGPRAGAAVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...AGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CAA 90 bp CTAGGCCCAGCGAGAACCTGGCAGGGCCTGGGTAAGGTTAGAGACTaGGCTGCCCCCATGCTCTCGGACTTACCTACGATGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LGPARTWQGLGKVRD*AAPMLSDLPTMWGW
Trigger: CCAGCCCCACATCGTAGGTAAGTCCGAGAGCATGGGGGCAGCCAAGTCTCTAACCTTACCCAGGCCCTGCCAGGTTCTCGCTGGGCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR GCA 90 bp GCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: APAQTSSGPAAVAAGCRLPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...AAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp TGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 2 (lower is better)
Translates to: CRCRLSSSSWWSSGRGGSSKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...GGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCATCCTGGGGAGGGGATaGCATACTGCTAGAGATGAG +
Preference number: 2 (lower is better)
Translates to: APADSGGVSPAHRWQPEIILGRG*HTARDE
Trigger: CTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGAT...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp ACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: TCCGATGRRGPQQRQAGLKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...CAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR CCA 90 bp GGCGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGGGCCCAGCGAGAACCTaGCAGGGCCTGGGTAAGGTT +
Preference number: 2 (lower is better)
Translates to: GGLLIGTLDSWCGDIHALGPART*QGLGKV
Trigger: AACCTTACCCAGGCCCTGCCAGGTTCTCGCTGGGCC...CAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR TCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 2 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RLRLALALLLSLQVVVFFHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 2 (lower is better)
Translates to: RLRLALALLLSLQVVVFFKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RLRLALALLLSLQVVVFFLSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCAAGCAGGAAAACATTaGTTTGCTGTACACTCAAAG +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPAQAGKH*FAVHSK
Trigger: CTTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR GCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 2 (lower is better)
Translates to: PGHEHPPCTWRRQGLPPLVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...AAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
3UTR-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: HAFSPPPPRATARALAPARKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 2 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
3UTR-3UTR CCA 90 bp CTGCTGATCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTCAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 2 (lower is better)
Translates to: LLIGTLDSWCGDIHALCPQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...AGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR TCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 2 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
3UTR-3UTR TCA 90 bp AACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 2 (lower is better)
Translates to: NKDRPGWIVAGQGGLLIGLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...CCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR GCA 90 bp GCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 2 (lower is better)
Translates to: AEPQGEGALNKDRPGWIVAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...CACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
3UTR-3UTR CCA 90 bp GTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAACACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VVIHTLVAEPQGEGALNKHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...TTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR TCA 90 bp ATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGCCCAGAATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: IPGVETYMPCALQGTRPRICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...TCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR TCA 90 bp AGGGCCTGGGTAAGGTTAGAGACTTGGCTGCCCCCATGCTCTCGGACTTACCTAGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 2 (lower is better)
Translates to: RAWVRLETWLPPCSRTYLAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...TAGGTAAGTCCGAGAGCATGGGGGCAGCCAAGTCTCTAACCTTACCCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR GCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 2 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGSKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
3UTR-3UTR TCA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 2 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR TCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 2 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR-3UTR CCA 90 bp TGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAACACCTGTTGAGTCTTTaGGCAAAGGAACCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: CGNTHTCCGATGRRGPQQHLLSL*AKEPGR
Trigger: TCTACCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...TTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR TCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCAAGCAGGAAAACATTaGTTTGCTGTACACTCAAAG +
Preference number: 2 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGQAGKH*FAVHSK
Trigger: CTTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
3UTR-3UTR GCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGRKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
3UTR-3UTR GCA 90 bp TGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: CGNTHTCCGATGRRGPQQRKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...TTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR CAA 90 bp GGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: GAPGWTRRGGRPRGSGPGWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...CCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp CTGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: LQRMSGAPGWTRRGGRPRTGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...CCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR CCA 72 bp CGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RVDPARRKTTGI*ARVGLVSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp TGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: CRGCLELPGGPGEAEDHGWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...CCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR CCA 72 bp CCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: PCCCRCRLSSSS*WSSGRGGSSSP
Trigger: AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp TGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: CRCRLSSSSWWSSGRGGSGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...GGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR TCA 72 bp GGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCTGGTGTGGAGACATAC +
Preference number: 3 (lower is better)
Translates to: GRAGLWRARAAC*SGLWIPGVETY
Trigger: GTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR CCA 72 bp TGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: CCCRCRLSSSSW*SSGRGGSSSPA
Trigger: TGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCCGCCCCTTTTTATTaGAATTCGGAGAACCAGAGG +
Preference number: 3 (lower is better)
Translates to: HAFSPPPPRATARALAPAPAPFY*NSENQR
Trigger: CCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
3UTR CCA 72 bp GGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTGCTAGAGATGAGGGAA +
Preference number: 3 (lower is better)
Translates to: GSRLPIAGSPRS*GGDAILLEMRE
Trigger: TTCCCTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR CCA 72 bp GGCCAGGGCGGCCTGCTGATCGGGACTCTGGATTCCTaGTGTGGAGACATACATGCCCTGTGCCCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: GQGGLLIGTLDS*CGDIHALCPAR
Trigger: CCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CAA 90 bp TGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: CGNTHTCCGATGRRGPQQTGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...TTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
3UTR-3UTR CAA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: GIWARVGLVSCRPWIHLACCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
3UTR TCA 72 bp AGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATGGCGAAGACAGGGCCT +
Preference number: 3 (lower is better)
Translates to: RPWIHLAIVAWS*APAMHMAKTGP
Trigger: AGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
3UTR GCA 72 bp ACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTaGCCTGCAAGGGACTCGGCCCAGAGGCCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: TLDSWCGDIHAL*PARDSAQRPRE
Trigger: CTCCCTGGGCCTCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR GCA 72 bp GATCGGGACTCTGGATTCCTGGTGTGGAGACATACATaGCCTGTGCCCTGCAAGGGACTCGGCCCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: DRDSGFLVWRHT*PVPCKGLGPEA
Trigger: GGCCTCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR CCA 72 bp GGGCGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTaGAGACATACATGCCCTGTGCCCTGCAAGGGACTC +
Preference number: 3 (lower is better)
Translates to: GRPADRDSGFLV*RHTCPVPCKGL
Trigger: GAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCAGGAAAACATTGATTaGCTGTACACTCAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: HAFSPPPPRATARALAPAQENID*LYTQRA
Trigger: TGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCTG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR-3UTR CAA 90 bp TGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 3 (lower is better)
Translates to: CGATGRRGPQQRQAGLDCGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...ACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR-3UTR CAA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
3UTR-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCAAGCAGGAAAACATaGATTTGCTGTACACTCAAA +
Preference number: 3 (lower is better)
Translates to: HAFSPPPPRATARALAPAPSRKT*ICCTLK
Trigger: TTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
3UTR TCA 72 bp CCACTTCCCTCTCCTCCGGGGGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACACACTTGTTGCGGAGCC +
Preference number: 3 (lower is better)
Translates to: PLPSPPGAASQL*GCGNTHTCCGA
Trigger: GGCTCCGCAACAAGTGTGTGTATTACCACATCCTCAGAGCTGACTTGCTGCCCCCGGAGGAGAGGGAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592571.1
3UTR-3UTR CAA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCAGGAAAACATTGATTaGCTGTACACTCAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIQENID*LYTQRA
Trigger: TGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCTG...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp GGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGGGGCGGCCCCGCAGGTaGCTCCCCAGGCCCTACAGA +
Preference number: 4 (lower is better)
Translates to: GAPGWTRRGGRPRGSGPGGRPRR*LPRPYR
Trigger: TCTGTAGGGCCTGGGGAGGCACCTGCGGGGCCGCCC...CCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCC
76% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGGGCGGCCCCGCAGGTaGCTCCCCAGGCCCTACAGA +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAGRPRR*LPRPYR
Trigger: TCTGTAGGGCCTGGGGAGGCACCTGCGGGGCCGCCC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTCGGGCCACAGCCCGTaGCCTCGCGCCGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPASGHSP*PRAGSD
Trigger: GTCTGAGCCGGCGCGAGGGCACGGGCTGTGGCCCGA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp TCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCATCGGGCCACAGCCCGTaGCCTCGCGCCGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SGAPGWTRRGGRPRGSGPSGHSP*PRAGSD
Trigger: GTCTGAGCCGGCGCGAGGGCACGGGCTGTGGCCCGA...TGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTCGGGCCACAGCCCGTaGCCTCGCGCCGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPSTKTGRAGLWRARAACSGHSP*PRAGSD
Trigger: GTCTGAGCCGGCGCGAGGGCACGGGCTGTGGCCCGA...GCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTAGATGGAGGTTCCTGTaGGGGCGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPARWRFL*GRPRRC
Trigger: GCACCTGCGGGGCCGCCCTCACAGGAACCTCCATCT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAARAAC*SGLWIP
Trigger: AGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270517.12
ENST00000417981.6
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCTCGGGCCAGTAGGGTaGCCTGGACCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPALGPVG*PGPSSC
Trigger: GCATGAGCTGGGTCCAGGCCACCCTACTGGCCCGAG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRVDPARRKTTGIWARVGPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPASSSSW*SSGRGG
Trigger: GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELPGGPGEAEDHGDLGQGSSSSW*SSGRGG
Trigger: GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGA...ACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: GAPGWTRRGGRPRGSGPGGSPRS*GGDAIL
Trigger: CAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCC...CCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPARLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CCACAGCCCGTGCCCTCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PQPVPSRRLRLALALLLSSSSSW*SSGRGG
Trigger: GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGA...CGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGAGGGCACGGGCTGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTGGGCGCTGCCATATTaGCCCAGAGAGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAWALPY*PRERPG
Trigger: ACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS-3UTR TCA 90 bp TCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAAGCCGGCGAGGGACCTaGGAGATGGAGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGAPGWTRRGGRPRGSGPSRRGT*EMEVPV
Trigger: CACAGGAACCTCCATCTCTCAGGTCCCTCGCCGGCT...TGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR TCA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SRVDPARRKTTGIWARVGAGPGR*SQCGPA
Trigger: AGCGGGGCCACATTGACTTCATCTACCTGGCCCTGC...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRAAALQ*RPRGSR
Trigger: CCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGC...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCTGCCGGGGTTCCGGTaGGCTGGGAACCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEILPGFR*AGNQGL
Trigger: CAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp GGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTGGACGAAGATGCGCTaGATGATGTTGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GAPGWTRRGGRPRGSGPGWTKMR*MMLRGR
Trigger: CCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA...CCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRVDPARRKTTGIWARVGKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPALSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGCGCCTGCAGATTCTaGAGGGGTCTCGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQRMSGAPGWTRRGGRPRGACRF*RGLACP
Trigger: TGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGCC...CCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCAGATGGAGGTTCCTGTaGGGGCGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CRLSSSSWWSSGRGGSSSRWRFL*GRPRRC
Trigger: GCACCTGCGGGGCCGCCCTCACAGGAACCTCCATCT...GCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCTTGTTGCTGGGCGCTaGCATATTGGCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPALVAGR*HIGPES
Trigger: GCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000417981.6
CDS-3UTR GCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTGGGCGGCCCCGCAGGTaGCTCCCCAGGCCCTACAGA +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRGRPRR*LPRPYR
Trigger: TCTGTAGGGCCTGGGGAGGCACCTGCGGGGCCGCCC...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR GCA 90 bp GGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCGGGCGGCCCCGCAGGTaGCTCCCCAGGCCCTACAGA +
Preference number: 4 (lower is better)
Translates to: GLLQALDPLSHRRLVMSTGRPRR*LPRPYR
Trigger: TCTGTAGGGCCTGGGGAGGCACCTGCGGGGCCGCCC...GGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGCTCTGTCTTGTTGCTaGGCGCTGCCATATTGGCCC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAALSCC*ALPYWP
Trigger: GGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
CDS-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCTCGGGCCAGTAGGGTaGCCTGGACCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEILGPVG*PGPSSC
Trigger: GCATGAGCTGGGTCCAGGCCACCCTACTGGCCCGAG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRAAALQ*RPRGSR
Trigger: CCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGC...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTGCCGGGGTTCCGGTaGGCTGGGAACCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LLSLQVVVFFLVVLGQGRLPGFR*AGNQGL
Trigger: CAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAG...CCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp TGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCGCACCAGAGCCTTGGTaGGCCTCTGCCGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CCRCRLSSSSWWSSGRGGAPEPW*ASAGVP
Trigger: CGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGC...GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEIPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: GCRLLPGGPRAGAAPPALPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...CAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLQVVVFFLVVLGQGRLSPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...GAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRLRLALALLLSLQVVVSPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...GACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTCAGGCGCACCAACTTaGGCATGGGGTAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SRVDPARRKTTGIWARVGSGAPT*AWGSFC
Trigger: GCAAAAGCTACCCCATGCTCAAGTTGGTGCGCCTGA...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCAGCTCTGTCTTGTTaGTGGGCGCTGCCATATTGG +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAPALSC*WALPYW
Trigger: CCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
CDS-3UTR GCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRALVGL*RGSGGL
Trigger: CAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGC...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp ACAGCCCGTGCCCTCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 4 (lower is better)
Translates to: TARALAPAQTSSGPAAVARSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...AGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGAGGGCACGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000592571.1
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCGCCCGGTTGCCGACTTaGGGCGTGACCTCTCGCGAG +
Preference number: 4 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLARLPT*GVTSRE
Trigger: CTCGCGAGAGGTCACGCCGCAAGTCGGCAACCGGGC...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CCA 90 bp GCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGCTCGGGCCAGTAGGGTaGCCTGGACCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: AAVAAGCRLLPGGPRAGALGPVG*PGPSSC
Trigger: GCATGAGCTGGGTCCAGGCCACCCTACTGGCCCGAG...CGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR CCA 90 bp TGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGCAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: CRGCLELPGGPGEAEDHGQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...CCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp AACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NKDRPGWIVAGQGGLLIGAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...CCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
CDS-3UTR CCA 90 bp CGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: RVDPARRKTTGIWARVGLVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...CAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQRMSGAPGWTRRGGRPRLSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...CCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLARAAC*SGLWIP
Trigger: AGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGC...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTTGGGCAAAGGAACCTaGGAGATGGAGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPALGKGT*EMEVPV
Trigger: CACAGGAACCTCCATCTCTCAGGTTCCTTTGCCCAA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417981.6
ENST00000588998.5
CDS-3UTR GCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCTATGGGCAGCTGCGCTaGAGTGGAGGCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRYGQLR*SGGPEG
Trigger: TCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATA...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLRLALALLLSLQVVVFFALVGL*RGSGGL
Trigger: CAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGC...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR GCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFALVGL*RGSGGL
Trigger: CAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGC...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPACSANF*TVCRKL
Trigger: GAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp GTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 4 (lower is better)
Translates to: VVVFFLVVLGQGRLLQPCRSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...GCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVDPARRKTTGIWARVGLSKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...CAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGACTTGGCTGCCCCCATaGTCTCGGACTTACCTACGA +
Preference number: 4 (lower is better)
Translates to: GALNKDRPGWIVAGQGGLTWLPP*SRTYLR
Trigger: TCGTAGGTAAGTCCGAGAGCATGGGGGCAGCCAAGT...CAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR GCA 90 bp GGCGGGCCAGGGCGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTaGAAGGGACTCGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGPGRPADRDSGFLVWRHTCPVP*KGLGPE
Trigger: CTCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGT...ATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp GCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCCAGTAGGGTGGCCTaGACCCAGCTCATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAVAAGCRLLPGGPRAGAASRVA*TQLMPL
Trigger: CAGAGGCATGAGCTGGGTCCAGGCCACCCTACTGGC...CGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR CCA 90 bp CGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCCTCGGGCCAGTAGGGTaGCCTGGACCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: RRLRLALALLLSLQVVVFLGPVG*PGPSSC
Trigger: GCATGAGCTGGGTCCAGGCCACCCTACTGGCCCGAG...GAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
CDS-3UTR CCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCGCACCAGAGCCTTGGTaGGCCTCTGCCGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFAPEPW*ASAGVP
Trigger: CGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGC...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLQVVVFFLVVLGQGRLAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...GAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp AGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: RLSSSSWWSSGRGGSSSPGSPRS*GGDAIL
Trigger: CAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCC...AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCGAAGATGCGCTGGATaGTGTTGCGAGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEIRRCAG*CCEAGR
Trigger: TCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: CRCRLSSSSWWSSGRGGSIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LRSHREKGPSTKTGRAGLARAAC*SGLWIP
Trigger: AGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGC...CAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270517.12
ENST00000417981.6
ENST00000592571.1
CDS-3UTR TCA 90 bp CCACAGCCCGTGCCCTCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGTTGGGCAAAGGAACCTaGGAGATGGAGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PQPVPSRRLRLALALLLSLGKGT*EMEVPV
Trigger: CACAGGAACCTCCATCTCTCAGGTTCCTTTGCCCAA...CGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGAGGGCACGGGCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588998.5
CDS-3UTR TCA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCTGCCGACTTGCGGCGTaGCCTCTCGCGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRCRLAA*PLARSS
Trigger: AGATGACCTCGCGAGAGGTCACGCCGCAAGTCGGCA...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR GCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCCCAGCTCATGCCTCTaGTTGTCAGACAATCACCTA +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAPSSCL*LSDNHL
Trigger: TAGGTGATTGTCTGACAAGCAGAGGCATGAGCTGGG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
CDS-3UTR GCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCTATGGGCAGCTGCGCTaGAGTGGAGGCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFYGQLR*SGGPEG
Trigger: TCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATA...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp GGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCTATGGGCAGCTGCGCTaGAGTGGAGGCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLLQALDPLSHRRLVMSTYGQLR*SGGPEG
Trigger: TCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATA...GGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp AGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RLSSSSWWSSGRGGSSSPHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEIPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCAGAACCAGAGGCGCCTaGAGATTCTGGAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEIRTRGA*RFWRGL
Trigger: GAGACCCCTCCAGAATCTGCAGGCGCCTCTGGTTCT...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCGGATTCCAAATCCTaGCCGGTTGCCGACTTGCGG +
Preference number: 4 (lower is better)
Translates to: AAGCRLLPGGPRAGAAPPADSKS*PVADLR
Trigger: CCGCAAGTCGGCAACCGGGCAGGATTTGGAATCCGC...TGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCGGGGTTCCGGTGGGCTaGGAACCAGGGACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRGVPVG*EPGTVQ
Trigger: CTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCC...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACCTGCCGGGGTTCCGGTaGGCTGGGAACCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDLPGFR*AGNQGL
Trigger: CAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAG...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp TGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGCTGCCGGGGTTCCGGTaGGCTGGGAACCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: WVGLLQALDPLSHRRLVMLPGFR*AGNQGL
Trigger: CAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAG...CATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGCACCAGAGCCTTGGTaGGCCTCTGCCGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ALDPLSHRRLVMSTRHAHAPEPW*ASAGVP
Trigger: CGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGC...ATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GGCGGGCCAGGGCGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTGGAGACATCAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: GGPGRPADRDSGFLVWRHQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...ATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp AGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SHRRLVMSTRHAHGEDRAAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...GGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CRLSSSSWWSSGRGGSSSHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp AGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLSSSSWWSSGRGGSSSPHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFSSSSW*SSGRGG
Trigger: GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGA...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLQVVVFFLVVLGQGRLLSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...GAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CCRCRLSSSSWWSSGRGGLSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCTCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFSPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGGCGCCTGCAGATTCTaGAGGGGTCTCGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WARVGLVSCRPWIHLAIVGACRF*RGLACP
Trigger: TGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGCC...GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCGGGACTCTGGATTCCTaGTGTGGAGACATACATGCC +
Preference number: 4 (lower is better)
Translates to: GPSTKTGRAGLWRARAACGTLDS*CGDIHA
Trigger: GGCATGTATGTCTCCACACCAGGAATCCAGAGTCCC...GCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
3UTR CAA 72 bp AGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATC +
Preference number: 4 (lower is better)
Translates to: RRKTTGIWARVG*VSCRPWIHLAI
Trigger: GATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp AGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SHRRLVMSTRHAHGEDRAAGPGR*SQCGPA
Trigger: AGCGGGGCCACATTGACTTCATCTACCTGGCCCTGC...GGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp CTGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAG +
Preference number: 4 (lower is better)
Translates to: LQRMSGAPGWTRRGGRPRPWGRC*AAGCTQ
Trigger: CTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGG...CCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR TCA 90 bp AGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSRVDPARRKTTGIWARVICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...AACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: PAAVAAGCRLLPGGPRAGIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...CCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: PAAVAAGCRLLPGGPRAGHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...CCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: VVVFFLVVLGQGRLLQPCVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...GCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEISKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp TGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCAGAACCAGAGGCGCCTaGAGATTCTGGAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CRCRLSSSSWWSSGRGGSRTRGA*RFWRGL
Trigger: GAGACCCCTCCAGAATCTGCAGGCGCCTCTGGTTCT...GGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp TCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCACCCAGCTCATGCCTCTaGTTGTCAGACAATCACAAC +
Preference number: 4 (lower is better)
Translates to: SGAPGWTRRGGRPRGSGPPSSCL*LSDNHN
Trigger: GTTGTGATTGTCTGACAAGCAGAGGCATGAGCTGGG...TGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CCA 90 bp CTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGCTCGGGCCAGTAGGGTaGCCTGGACCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LSHRRLVMSTRHAHGEDRLGPVG*PGPSSC
Trigger: GCATGAGCTGGGTCCAGGCCACCCTACTGGCCCGAG...CCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
CDS-3UTR CCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTGGGGTTCCGGTGGGCTaGGAACCAGGGACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRGVPVG*EPGTVQ
Trigger: CTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCC...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp AGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSRVDPARRKTTGIWARVKMLSS*LYTARS
Trigger: GGACCTGGCTGTGTACAACCAGCTGCTCAACATCTT...AACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVKMLSS*LYTARS
Trigger: GGACCTGGCTGTGTACAACCAGCTGCTCAACATCTT...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCTTGGGCATCACACCGTaGTTCTCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEILGITP*FSICSR
Trigger: CCTGGAGCAGATGGAGAACCACGGTGTGATGCCCAA...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp AGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHRRLVMSTRHAHGEDRAHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp AGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: RLSSSSWWSSGRGGSSSPVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GIWARVGLVSCRPWIHLAKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: WARVGLVSCRPWIHLAIVGSPRS*GGDAIL
Trigger: CAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCC...GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCACCTGTTGAGTCTTTaGGCAAAGGAACCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPAHLLSL*AKEPER
Trigger: TCTCTCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417981.6
ENST00000588998.5
CDS-3UTR CCA 90 bp ACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGGCCCAGCGAGAACCTaGCAGGGCCTGGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TCCGATGRRGPQQRQAGLGPART*QGLGKV
Trigger: AACCTTACCCAGGCCCTGCCAGGTTCTCGCTGGGCC...CAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp GGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTCTGGATTCCTGGTGTaGAGACATACATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPSTKTGRAGLWRARAACSGFLV*RHTCPV
Trigger: CACAGGGCATGTATGTCTCCACACCAGGAATCCAGA...GCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp TGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCCGAAGATGCGCTGGATaGTGTTGCGAGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCCRCRLSSSSWWSSGRGRRCAG*CCEAGR
Trigger: TCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCG...GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR TCA 90 bp AGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCCGAAGATGCGCTGGATaGTGTTGCGAGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHRRLVMSTRHAHGEDRARRCAG*CCEAGR
Trigger: TCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCG...GGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTGGGCGGCCCCGCAGGTaGCTCCCCAGGCCCTACAGA +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIGRPRR*LPRPYR
Trigger: TCTGTAGGGCCTGGGGAGGCACCTGCGGGGCCGCCC...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAALVGL*RGSGGL
Trigger: CAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEICSANF*TVCRKL
Trigger: GAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCA...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp TCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: SRRLRLALALLLSLQVVVVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...GACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LALALLLSLQVVVFFLVVRLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...GACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFRLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSRLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACCGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDRLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRLRLALALLLSLQVVVFPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...GAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTTCGGGCCACAGCCCGTaGCCTCGCGCCGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQISGHSP*PRAGSD
Trigger: GTCTGAGCCGGCGCGAGGGCACGGGCTGTGGCCCGA...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGTCGGGCCACAGCCCGTaGCCTCGCGCCGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGSGHSP*PRAGSD
Trigger: GTCTGAGCCGGCGCGAGGGCACGGGCTGTGGCCCGA...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp GTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTTGGAGGGGTCTCGCCTaGCCATCGCTGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VMSTRHAHGEDRAFLHFIWRGLA*PSLAAR
Trigger: TCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCA...AATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCAGAACCAGAGGCGCCTaGAGATTCTGGAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARVGLVSCRPWIHLAIVARTRGA*RFWRGL
Trigger: GAGACCCCTCCAGAATCTGCAGGCGCCTCTGGTTCT...GGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp ATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCACATGCCCTGTGCCCTaGAAGGGACTCGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: IWARVGLVSCRPWIHLAITCPVP*KGLGPE
Trigger: CTCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGT...GATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR GCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCGACATACATGCCCTGTaGCCTGCAAGGGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFDIHAL*PARDSA
Trigger: GGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTC...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR CCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIAAALQ*RPRGSR
Trigger: CCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGC...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGAAALQ*RPRGSR
Trigger: CCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGC...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp GTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCAGGGGTTCCGGTGGGCTaGGAACCAGGGACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VGLVSCRPWIHLAIVAWSGVPVG*EPGTVQ
Trigger: CTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCC...TGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp TGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTTGGGCATCACACCGTaGTTCTCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CCRCRLSSSSWWSSGRGGLGITP*FSICSR
Trigger: CCTGGAGCAGATGGAGAACCACGGTGTGATGCCCAA...GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp GTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGAACTCCGTCTCCTTGTTaGGCATCACACCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VVFFLVVLGQGRLLQPCRTPSPC*ASHRGS
Trigger: AGAACCACGGTGTGATGCCCAACAAGGAGACGGAGT...TCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CCA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCCAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCAGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VGLVSCRPWIHLAIVAWSAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...TGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp TGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WARVGLVSCRPWIHLAIVHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: GIWARVGLVSCRPWIHLAVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp AGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGCCTGCAGAGGATGTCTaGAGCTCCCGGGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: RLALALLLSLQVVVFFLVPAEDV*SSRVDP
Trigger: CGGGTCCACCCGGGAGCTCCAGACATCCTCTGCAGG...CACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCGGCCCAGCGAGAACCTaGCAGGGCCTGGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSGPART*QGLGKV
Trigger: AACCTTACCCAGGCCCTGCCAGGTTCTCGCTGGGCC...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR TCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGAGATGGAGGTTCCTGTaGGGGCGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQRWRFL*GRPRRC
Trigger: GCACCTGCGGGGCCGCCCTCACAGGAACCTCCATCT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR TCA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDAGPGR*SQCGPA
Trigger: AGCGGGGCCACATTGACTTCATCTACCTGGCCCTGC...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCTCAGGCGCACCAACTTaGGCATGGGGTAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GIWARVGLVSCRPWIHLASGAPT*AWGSFC
Trigger: GCAAAAGCTACCCCATGCTCAAGTTGGTGCGCCTGA...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp GTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGAATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: VVFFLVVLGQGRLLQPCRICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...TCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: HAFSPPPPRATARALAPALPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: LDPLSHRRLVMSTRHAHGIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...GCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCCAGCTCTGTCTTGTTaGTGGGCGCTGCCATATTGG +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRPALSC*WALPYW
Trigger: CCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGG...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR GCA 90 bp CTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCTCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LALALLLSLQVVVFFLVVSPPGA*PNRSSK
Trigger: CTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGA...GACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR GCA 90 bp CCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTTCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGHEHPPCTWRRQGLPPLSPPGA*PNRSSK
Trigger: CTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGA...AAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLQVVVFFLVVLGQGRLNFCTV*RKLALS
Trigger: GGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATT...GAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR GCA 90 bp ATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 4 (lower is better)
Translates to: IWARVGLVSCRPWIHLAIRSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...GATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATCATGAGCACCCGCCATaGACATGGCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: ALDPLSHRRLVMSTRHAHHEHPP*TWRRQG
Trigger: GCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATG...ATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCAGAACCAGAGGCGCCTaGAGATTCTGGAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFRTRGA*RFWRGL
Trigger: GAGACCCCTCCAGAATCTGCAGGCGCCTCTGGTTCT...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGTGGGCATCACACCTGTaGGTGGTTCTCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: AEPQGEGALNKDRPGWIVWASHL*VVLHLL
Trigger: GAGCAGATGGAGAACCACGCACAGGTGTGATGCCCA...CACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR GCA 90 bp CACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGACATACATGCCCTGTaGCCTGCAAGGGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: HTLVAEPQGEGALNKDRPDIHAL*PARDSA
Trigger: GGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTC...CGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCACCAGAGCCTTGGTaGGCCTCTGCCGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAAPEPW*ASAGVP
Trigger: CGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: APADSGGVSPAHRWQPEIKMLSS*LYTARS
Trigger: GGACCTGGCTGTGTACAACCAGCTGCTCAACATCTT...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp AACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NKDRPGWIVAGQGGLLIGKMLSS*LYTARS
Trigger: GGACCTGGCTGTGTACAACCAGCTGCTCAACATCTT...CCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCTTGGGCATCACACCGTaGTTCTCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRLGITP*FSICSR
Trigger: CCTGGAGCAGATGGAGAACCACGGTGTGATGCCCAA...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp TACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YTHLLRSHREKGPSTKTGGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...GCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCATCGCCTGCCCATCGCTaGCAGCCCGAGATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPASPAHR*QPEILG
Trigger: CCCCAGGATCTCGGGCTGCCAGCGATGGGCAGGCGA...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCGGCTGCCAGGATTCTaGGTCTCTTGGGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRRLPGF*VSWGKK
Trigger: CTTTTTCCCCCAAGAGACCCAGAATCCTGGCAGCCG...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CCA 90 bp AGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGCATCACACCTGTGCGTaGTTCTCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHREKGPSTKTGRAGLWRHHTCA*FSICSR
Trigger: CCTGGAGCAGATGGAGAACCACGCACAGGTGTGATG...CCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGAGATGGAGGTTCCTGTaGGGGCGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGRWRFL*GRPRRC
Trigger: GCACCTGCGGGGCCGCCCTCACAGGAACCTCCATCT...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR TCA 90 bp GCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAG +
Preference number: 4 (lower is better)
Translates to: APAQTSSGPAAVAAGCRLPWGRC*AAGCTQ
Trigger: CTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGG...AAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR TCA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAG +
Preference number: 4 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLPWGRC*AAGCTQ
Trigger: CTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGG...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCATCAGGCGCACCAACTTaGGCATGGGGTAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPSGAPT*AWGSFC
Trigger: GCAAAAGCTACCCCATGCTCAAGTTGGTGCGCCTGA...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAARAAC*SGLWIP
Trigger: AGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270517.12
CDS-3UTR TCA 90 bp CTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCAATCACAACAGCTTTaGAACCGGCTGCCAGGATTC +
Preference number: 4 (lower is better)
Translates to: LSLQVVVFFLVVLGQGRLQSQQL*NRLPGF
Trigger: GAATCCTGGCAGCCGGTTTCAAAGCTGTTGTGATTG...GAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR GCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCCTTGTTGCTGGGCGCTaGCATATTGGCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFLVAGR*HIGPES
Trigger: GCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAG...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR GCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGTATGGGCAGCTGCGCTaGAGTGGAGGCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQYGQLR*SGGPEG
Trigger: TCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATA...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRCSANF*TVCRKL
Trigger: GAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCA...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACGCTTACGCACGCTGTaGTCCGCAAATTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPRLRTL*SANFCT
Trigger: GGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCG...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp TGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCCGCTTACGCACGCTGTaGTCCGCAAATTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: WARVGLVSCRPWIHLAIVRLRTL*SANFCT
Trigger: GGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCG...GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CGGCCTGCTGATCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 4 (lower is better)
Translates to: RPADRDSGFLVWRHTCPVRSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...CACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGATCAGCAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR GCA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp ACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: TCCGATGRRGPQQRQAGLVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...CAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR GCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCCCTGCTGCTGTCGCTaGAGGTTGTCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLRLALALLLSLQVVVFFPCCCR*RLSSSS
Trigger: GGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGG...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVSKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTTGGAGGGGTCTCGCCTaGCCATCGCTGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIWRGLA*PSLAAR
Trigger: TCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCA...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGACTTGGCTGCCCCCATaGTCTCGGACTTACCTACGA +
Preference number: 4 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLTWLPP*SRTYLR
Trigger: TCGTAGGTAAGTCCGAGAGCATGGGGGCAGCCAAGT...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR CCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCTGGACGAAGATGCGCTaGATGATGTTGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSWTKMR*MMLRGR
Trigger: CCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATTGGACGAAGATGCGCTaGATGATGTTGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ALDPLSHRRLVMSTRHAHWTKMR*MMLRGR
Trigger: CCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA...ATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCTTGGGCATCACACCGTaGTTCTCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVLGITP*FSICSR
Trigger: CCTGGAGCAGATGGAGAACCACGGTGTGATGCCCAA...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGGGCCAGGGTTGGGTTaGTCTCCTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADGPGLG*SPAGPG
Trigger: TCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCC...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGGCGCCTGCAGATTCTaGAGGGGTCTCGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQGACRF*RGLACP
Trigger: TGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGCC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp TCTGAGGATGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCGGCGCCTGCAGATTCTaGAGGGGTCTCGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SEDVVIHTLVAEPQGEGAGACRF*RGLACP
Trigger: TGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGCC...GGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACATCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CCA 90 bp GTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGACACCTGTTGAGTCTTTaGGCAAAGGAACCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VVFFLVVLGQGRLLQPCRHLLSL*AKEPER
Trigger: TCTCTCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...TCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588998.5
CDS-3UTR TCA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: GIWARVGLVSCRPWIHLAICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp GTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: VVIHTLVAEPQGEGALNKARAAC*SGLWIP
Trigger: AGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGC...TTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
CDS-3UTR TCA 90 bp GGGATCTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 4 (lower is better)
Translates to: GIWARVGLVSCRPWIHLAAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...GGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATGTCATCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: APAMHMAKTGPSSTSLMSSPPGA*PNRSSK
Trigger: CTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGA...TGACATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HRRLVMSTRHAHGEDRAFNFCTV*RKLALS
Trigger: GGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATT...GAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGCGCTTACGCACGCTGTaGTCCGCAAATTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LSHRRLVMSTRHAHGEDRRLRTL*SANFCT
Trigger: GGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCG...CCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCACGGCTCCTCCAGCCCTaGAGAGGATGTCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPARLLQP*RGCLEL
Trigger: GAGCTCCAGACATCCTCTGCAGGGCTGGAGGAGCCG...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp CGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCTCAAAGGGCATCTCATaGCTTCAGTCCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLRLALALLLSLQVVVFFSKGIS*LQSTAS
Trigger: GGAGGCGGTGGACTGAAGGCATGAGATGCCCTTTGA...GAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTATCCTGGGGAGGGGATaGCATACTGCTAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRILGRG*HTARDE
Trigger: CTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGAT...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCAGCTTTGAAACCGGCTaGCAGGATTCTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRSFETG*QDSGSL
Trigger: AAGAGACCCAGAATCCTGGCAGCCGGTTTCAAAGCT...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR GCA 90 bp GTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCAGTGTGGAGACATACATaGCCTGTGCCCTGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VGLVSCRPWIHLAIVAWSVWRHT*PVPCKG
Trigger: TCCCTTGCAGGGCACAGGGCATGTATGTCTCCACAC...TGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR CCA 90 bp AGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGCTCTGTCTTGTTGCTaGGCGCTGCCATATTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLALALLLSLQVVVFFLVALSCC*ALPYWP
Trigger: GGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGC...CACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR CCA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGCCAGTAGGGTGGCCTaGACCCAGCTCATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADASRVA*TQLMPL
Trigger: CAGAGGCATGAGCTGGGTCCAGGCCACCCTACTGGC...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLKMLSS*LYTARS
Trigger: GGACCTGGCTGTGTACAACCAGCTGCTCAACATCTT...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGTGGACGAAGATGCGCTaGATGATGTTGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LWIPGVETYMPCALQGTRWTKMR*MMLRGR
Trigger: CCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA...CCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTACTCCGTCTCCTTGTTaGGCATCACACCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRTPSPC*ASHRGS
Trigger: AGAACCACGGTGTGATGCCCAACAAGGAGACGGAGT...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGACTCCGTCTCCTTGTTaGGCATCACACCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLTPSPC*ASHRGS
Trigger: AGAACCACGGTGTGATGCCCAACAAGGAGACGGAGT...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CAAACTCGTAGTTGTCCCAGCCACTCCTCACATACTCCAGGTCCAGCTGCATCGGCCGCAGGCCAAACATaGCCAGCTCCACAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QTRSCPSHSSHTPGPAASAAGQT*PAPQGP
Trigger: AGGACCCTGTGGAGCTGGCCATGTTTGGCCTGCGGC...CGATGCAGCTGGACCTGGAGTATGTGAGGAGTGGCTGGGACAACTACGAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTTCGTCTTCTTCCTGGTaGTCCTCGGGCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQISSSSW*SSGRGG
Trigger: GCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGA...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGGCAGCCCGAGATCCTaGGGAGGGGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQGSPRS*GGDAIL
Trigger: CAGTATGGCATCCCCTCCCCAGGATCTCGGGCTGCC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp TGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTCACCTGTTGAGTCTTTaGGCAAAGGAACCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGATGRRGPQQRQAGLDCHLLSL*AKEPLG
Trigger: CCCCAGAGGTTCCTTTGCCCAAAGACTCAACAGGTG...ACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR TCA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADAGPGR*SQCGPA
Trigger: AGCGGGGCCACATTGACTTCATCTACCTGGCCCTGC...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGTTGCGTCCAAAGATCTaGATCAGCAGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSLRPKI*ISRNSV
Trigger: GACGGAGTTCCTGCTGATTCAGATCTTTGGACGCAA...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR TCA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 4 (lower is better)
Translates to: CCGATGRRGPQQRQAGLDAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...ATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592571.1
ENST00000593231.1
CDS-3UTR GCA 90 bp TGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WVGLLQALDPLSHRRLVMCSANF*TVCRKL
Trigger: GAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCA...CATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LLSLQVVVFFLVVLGQGRAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...CCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR GCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGAGGTCAGGCTCCATGTaGCGCAGGCCAAACATGGCC +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQRSGSM*RRPNMA
Trigger: GGCCATGTTTGGCCTGCGGCACATGGAGCCTGACCT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp CTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGATCCTGGGGAGGGGATaGCATACTGCTAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: LSHRRLVMSTRHAHGEDRILGRG*HTARDE
Trigger: CTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGAT...CCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCATCCTGGGGAGGGGATaGCATACTGCTAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSILGRG*HTARDE
Trigger: CTCATCTCTAGCAGTATGGCATCCCCTCCCCAGGAT...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTGGGGTTCCGGTGGGCTaGGAACCAGGGACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIGVPVG*EPGTVQ
Trigger: CTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCC...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATCAGGTCCCGGGGCACTaGGAAGGGGTTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADQVPGH*EGVDVH
Trigger: ATGAACGTCAACCCCTTCCCAGTGCCCCGGGACCTG...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp TCTGAGGATGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCACCCGCCATGCACATaGCGAAGACAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SEDVVIHTLVAEPQGEGAHPPCT*RRQGLP
Trigger: AGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTG...GGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACATCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCATTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPALSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGACTCCGTCTCCTTGTTaGGCATCACACCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LWIPGVETYMPCALQGTRTPSPC*ASHLCV
Trigger: CACGCACAGGTGTGATGCCCAACAAGGAGACGGAGT...CCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp CCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTGGGACTCTGGATTCCTaGTGTGGAGACATACATGCC +
Preference number: 4 (lower is better)
Translates to: PGHEHPPCTWRRQGLPPLGTLDS*CGDIHA
Trigger: GGCATGTATGTCTCCACACCAGGAATCCAGAGTCCC...AAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR TCA 90 bp TCGGGACTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAG +
Preference number: 4 (lower is better)
Translates to: SGLWIPGVETYMPCALQGPWGRC*AAGCTQ
Trigger: CTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGG...CCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAGTCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp TCTGAGGATGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCGAAGATGCGCTGGATaGTGTTGCGAGGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEDVVIHTLVAEPQGEGARRCAG*CCEAGR
Trigger: TCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCG...GGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACATCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCTTGCGTCCAAAGATCTaGATCAGCAGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFLRPKI*ISRNSV
Trigger: GACGGAGTTCCTGCTGATTCAGATCTTTGGACGCAA...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp CTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCTTGCGTCCAAAGATCTaGATCAGCAGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: LDPLSHRRLVMSTRHAHGLRPKI*ISRNSV
Trigger: GACGGAGTTCCTGCTGATTCAGATCTTTGGACGCAA...GCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp TACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCTCAGGCGCACCAACTTaGGCATGGGGTAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: YTHLLRSHREKGPSTKTGSGAPT*AWGSFC
Trigger: GCAAAAGCTACCCCATGCTCAAGTTGGTGCGCCTGA...GCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp CTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LDPLSHRRLVMSTRHAHGICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...GCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTATCGTCGCCTGGTCATaGGCACCCGCCATGCACATG +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIIVAWS*APAMHM
Trigger: CATGTGCATGGCGGGTGCTCATGACCAGGCGACGAT...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR TCA 90 bp GTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTGCAGACAAGCAGGAAAACATTaGTTTGCTGTACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: VVFFLVVLGQGRLLQPCRQAGKH*FAVHSK
Trigger: CTTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTG...TCTGCAGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTTCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQISPPGA*PNRSSK
Trigger: CTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGA...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCTCTGTCTTGTTGCTaGGCGCTGCCATATTGGCCC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAALSCC*ALPYWP
Trigger: GGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGTGGACGAAGATGCGCTaGATGATGTTGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQWTKMR*MMLRGR
Trigger: CCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCACCTGTTGAGTCTTTaGGCAAAGGAACCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRHLLSL*AKEPGR
Trigger: TCTACCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGTCTCCTGCAGGCCCTaGATCCACTTAGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAVSCRP*IHLAIV
Trigger: GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGAC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGAAGACCACGGGGATCTaGGCCAGGGTTGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGKTTGI*ARVGLV
Trigger: GACCAACCCAACCCTGGCCCAGATCCCCGTGGTCTT...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTTTGTCGTCTTCTTCCTaGTGGTCCTCGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQILSSSS*WSSGRG
Trigger: GCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAA...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCTCTGGATTCCTGGTGTaGAGACATACATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LDPLSHRRLVMSTRHAHGSGFLV*RHTCPV
Trigger: CACAGGGCATGTATGTCTCCACACCAGGAATCCAGA...GCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR TCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCATCAGGCGCACCAACTTaGGCATGGGGTAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPASGAPT*AWGSFC
Trigger: GCAAAAGCTACCCCATGCTCAAGTTGGTGCGCCTGA...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LWIPGVETYMPCALQGTRICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...CCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR GCA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCACGCTTACGCACGCTGTaGTCCGCAAATTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPARLRTL*SANFCT
Trigger: GGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCG...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR GCA 90 bp CTGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LGQGWVGLLQALDPLSHRAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...ACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGTTGGGTTGGTCTCCTaGAGGCCCTGGATCCACTTA +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQVGLVS*RPWIHL
Trigger: TAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CCA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACCACCTGTTGAGTCTTTaGGCAAAGGAACCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDHLLSL*AKEPGR
Trigger: TCTACCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR TCA 90 bp CACTGGGAAGGGGTTGACGTTCATGAATCGAGGGAACCACAGCTTCAGGCGCACTTGCGTCCAAAGATCTaGATCAGCAGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: HWEGVDVHESREPQLQAHLRPKI*ISRNSV
Trigger: GACGGAGTTCCTGCTGATTCAGATCTTTGGACGCAA...GTGCGCCTGAAGCTGTGGTTCCCTCGATTCATGAACGTCAACCCCTTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR TCA 90 bp TGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: CCGATGRRGPQQRQAGLDLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...ATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR TCA 90 bp GTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 4 (lower is better)
Translates to: VMSTRHAHGEDRAFLHFIAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...AATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp ATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MSTRHAHGEDRAFLHFIDNFCTV*RKLALS
Trigger: GGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATT...ATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR GCA 90 bp CACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: HTLVAEPQGEGALNKDRPAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...CGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR GCA 90 bp TCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRRLRLALALLLSLQVVVRKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...GACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp GTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGTGTGGAGACATACATaGCCTGTGCCCTGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VVIHTLVAEPQGEGALNKVWRHT*PVPCKG
Trigger: TCCCTTGCAGGGCACAGGGCATGTATGTCTCCACAC...TTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGACTCCGTCTCCTTGTTaGGCATCACACCGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQTPSPC*ASHRGS
Trigger: AGAACCACGGTGTGATGCCCAACAAGGAGACGGAGT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAG +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGPWGRC*AAGCTQ
Trigger: CTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATCTGCTGCACCTGTTaGGTCTTTGGGCAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQICCTC*VFGQRN
Trigger: GTTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGAT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR GCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGNFCTV*RKLALS
Trigger: GGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATT...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGTTGCGTCCAAAGATCTaGATCAGCAGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGLRPKI*ISRNSV
Trigger: GACGGAGTTCCTGCTGATTCAGATCTTTGGACGCAA...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR TCA 90 bp CTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGCAAGCAGGAAAACATTaGTTTGCTGTACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSHRRLVMSTRHAHGEDRQAGKH*FAVHSK
Trigger: CTTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTG...CCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp CTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCAAGCAGGAAAACATTaGTTTGCTGTACACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LALALLLSLQVVVFFLVVQAGKH*FAVHSK
Trigger: CTTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTG...GACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTGCAGCAAGTCAGCTCTaGGGATGTGGTAATACACAC +
Preference number: 4 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIAASQL*GCGNTH
Trigger: GTGTGTATTACCACATCCTCAGAGCTGACTTGCTGC...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270517.12
CDS-3UTR GCA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVRKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR GCA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCAAGGAAAACATTGATTTaGTGTACACTCAAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPRKTLI*CTLKGH
Trigger: ATGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCT...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR TCA 90 bp GTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: VMSTRHAHGEDRAFLHFILPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...AATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCACCTGTTGAGTCTTTaGGCAAAGGAACCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGHLLSL*AKEPGR
Trigger: TCTACCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CCA 90 bp CTCCTCCGGGGGCAGCAAGTCAGCTCTGAGGATGTGGTAATACACACACTTGTTCACCTGTTGAGTCTTTaGGCAAAGGAACCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLRGQQVSSEDVVIHTLVHLLSL*AKEPGR
Trigger: TCTACCAGGTTCCTTTGCCCAAAGACTCAACAGGTG...AACAAGTGTGTGTATTACCACATCCTCAGAGCTGACTTGCTGCCCCCGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR TCA 90 bp ATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATCTTCCTCCACTTCATTaGTGTCAAACTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: MSTRHAHGEDRAFLHFIDLPPLH*CQTRSC
Trigger: ACAACTACGAGTTTGACATCAATGAAGTGGAGGAAG...ATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR GCA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGGCATGGGGTAGCTTTTaGGTCCAAAGATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGAWGSF*VQRSES
Trigger: TGATTCAGATCTTTGGACGCAAAAGCTACCCCATGC...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPATGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270517.12
ENST00000417981.6
ENST00000592571.1
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPAWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTCTGGGCGCTGCCATATaGGCCCAGAGAGCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPALGAAI*AQRASG
Trigger: CCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAG...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CCA 90 bp TGCCGGGGTTCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTATaGGCAGCTGCGCTGCAGTGGAGGCCCCGAGGGAGCCGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: CRGSGGLGTRDCSEL*AAALQWRPRGSRRG
Trigger: CCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPACRKLA*SRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPAGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ELPGGPGEAEDHGDLGQGGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...ACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GALNKDRPGWIVAGQGGLGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...CAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CAA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRTGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592312.5
ENST00000592571.1
CDS GCA 90 bp GTGGGCTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTGCGCTaGAGTGGAGGCCCCGAGGGAGCCGGCGAGGGACCTACTCACGCG +
Preference number: 5 (lower is better)
Translates to: VGWEPGTVQSYGQLR*SGGPEGAGEGPTHA
Trigger: CGCGTGAGTAGGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585318.5
ENST00000592312.5
CDS CCA 90 bp CTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGGCGAGGGACCTACTCACGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGTRDCSELWAAALQ*RPRGSRRGTYSRGQ
Trigger: CTGGCCGCGTGAGTAGGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585318.5
ENST00000592312.5
CDS-3UTR CAA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCAAGGGCACCAGAGCCTaGGTGGGCCTCTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: APADSGGVSPAHRWQPEIKGTRA*VGLCRG
Trigger: ACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTT...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS GCA 90 bp TTCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTaGGCTGCAGTGGAGGCCCCGAGGGAGCCGGCGAGGGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: FRWAGNQGLFRAMGS*AAVEAPREPARDLR
Trigger: TCTCAGGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000590480.1
ENST00000591104.5
CDS GCA 90 bp GGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTTGCTGGGCGCTaGCATATTGGCCCAGAGAGCGTCCGGGTCAGGGAGCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: GQPRTPGQLCLVAGR*HIGPESVRVRELQG
Trigger: TCCCTGGAGCTCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS GCA 90 bp TTCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTaGGCTGCAGTGGAGGCCCCGAGGGAGCCGGCGAGGGACAACAGC +
Preference number: 5 (lower is better)
Translates to: FRWAGNQGLFRAMGS*AAVEAPREPARDNS
Trigger: GCTGTTGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592665.1
CDS GCA 90 bp TTCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTaGGCTGCAGTGGAGGCCCCGAGGGAGCCGGCGAGGGACCTACTC +
Preference number: 5 (lower is better)
Translates to: FRWAGNQGLFRAMGS*AAVEAPREPARDLL
Trigger: GAGTAGGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585318.5
ENST00000592312.5
CDS CCA 90 bp CTCACGCGGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTTGCTaGGCGCTGCCATATTGGCCCAGAGAGCGTCCGGGTCAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: LTRPAADSRPALSCC*ALPYWPRERPGQGA
Trigger: AGCTCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCCGCGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGCCAGCTCTGTCTTGTaGCTGGGCGCTGCCATATTG +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPAASSVL*LGAAIL
Trigger: CAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
CDS-3UTR CAA 90 bp CGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGATGCGCTGGATGATGTaGCGAGGCCGGAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: RVDPARRKTTGIWARVGLMRWMM*RGRKTS
Trigger: GGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT...CAACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPACCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PGWTRRGGRPRGSGPGLGCCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...ACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS GCA 90 bp CTACTCACGCGGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTTaGTGGGCGCTGCCATATTGGCCCAGAGAGCGTCCGGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LLTRPAADSRPALSC*WALPYWPRERPGQG
Trigger: TCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCCGCGTGAGTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS-3UTR CAA 90 bp GCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCAAGGGCACCAGAGCCTaGGTGGGCCTCTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: ARVGLVSCRPWIHLAIVAKGTRA*VGLCRG
Trigger: ACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTT...GGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp TCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGAACTCCGTCTCCTTGTaGGGCATCACACCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SRVDPARRKTTGIWARVGNSVSL*GITPWF
Trigger: GAACCACGGTGTGATGCCCAACAAGGAGACGGAGTT...CCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 5 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp GCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARVGLVSCRPWIHLAIVAWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...GGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGCCCGGTTGCCGACTaGCGGCGTGACCTCTCGCGA +
Preference number: 5 (lower is better)
Translates to: ARVGLVSCRPWIHLAIVACPVAD*RRDLSR
Trigger: TCGCGAGAGGTCACGCCGCAAGTCGGCAACCGGGCA...GGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS GCA 90 bp ACCGTCTGCAGGAAGCTCGCCTTGTCCCGTTCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAGGGCACCAGAGCCTTGGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TVCRKLALSRSPPGA*PNRSSKGTRALVGL
Trigger: GAGGCCCACCAAGGCTCTGGTGCCCTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS GCA 90 bp TGGCCCCGCTTACGCACGCTGTGCTCCGCAAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCCCGTTCCCCACCAGGCGCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: WPRLRTLCSANFCTV*RKLALSRSPPGACP
Trigger: TGGGCAGGCGCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS-3UTR CAA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCAAGGGCACCAGAGCCTaGGTGGGCCTCTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVKGTRA*VGLCRG
Trigger: ACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTT...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCAAAGGGCACCAGAGCCTaGGTGGGCCTCTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPKGTRA*VGLCRG
Trigger: ACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTT...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLCRKLA*SRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCA...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS CCA 90 bp CTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTGCGCTGCAGTaGAGGCCCCGAGGGAGCCGGCGAGGGACAACAGCTTTGAAACCG +
Preference number: 5 (lower is better)
Translates to: LGTRDCSELWAAALQ*RPRGSRRGTTALKP
Trigger: CGGTTTCAAAGCTGTTGTCCCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592665.1
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTAGCTCATGCCTCTGCTaGTCAGACAATCACCTACTC +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPASSCLC*SDNHLL
Trigger: GAGTAGGTGATTGTCTGACAAGCAGAGGCATGAGCT...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
CDS-3UTR CAA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVCRKLA*SRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCA...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp GCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AAVAAGCRLLPGGPRAGAGRKTS*GKMLSS
Trigger: GCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC...CGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp GCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AAGCRLLPGGPRAGAAPPGRKTS*GKMLSS
Trigger: GCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC...TGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp AGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGGCTCCTCCAGCCCTATGCGCTGGATGATGTaGCGAGGCCGGAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: RLSSSSWWSSGRGGSSSPMRWMM*RGRKTS
Trigger: GGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT...AGGGCTGGAGGAGCCGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp CTCAACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTGATCATGCGCTGGATGATGTaGCGAGGCCGGAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: LNKDRPGWIVAGQGGLLIMRWMM*RGRKTS
Trigger: GGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT...GATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 5 (lower is better)
Translates to: APADSGGVSPAHRWQPEIGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CATGCCTTCAGTCCACCGCCTCCTCGGGCCACAGCCCGTGCCCTCGCGCCGGCTGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: HAFSPPPPRATARALAPADLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...AGCCGGCGCGAGGGCACGGGCTGTGGCCCGAGGAGGCGGTGGACTGAAGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000417981.6
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: ELPGGPGEAEDHGDLGQGDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...ACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LALALLLSLQVVVFFLVVWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...GACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LDPLSHRRLVMSTRHAHGWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...GCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp TGGGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: WARVGLVSCRPWIHLAIVGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...GACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp ATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: MSTRHAHGEDRAFLHFIDTGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...ATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGCCAAATCCTGCCCGGTaGCCGACTTGCGGCGTGACC +
Preference number: 5 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSPNPAR*PTCGVT
Trigger: GGTCACGCCGCAAGTCGGCAACCGGGCAGGATTTGG...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS GCA 90 bp TGCCCAAACAGGTCCTCAAAGGGCACCAGAGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: CPNRSSKGTRALVGL*RGSGGLGTRDCSEL
Trigger: TAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTTTGAGGACCTGTTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS-3UTR CAA 90 bp CTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCATGCGCTGGATGATGTaGCGAGGCCGGAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: LLQALDPLSHRRLVMSTRMRWMM*RGRKTS
Trigger: GGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT...GCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp TCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 5 (lower is better)
Translates to: SRRLRLALALLLSLQVVVGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...GACGACAACCTGCAGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR CAA 90 bp TGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: WVGLLQALDPLSHRRLVMGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...CATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGCGTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AAVAAGCRLLPGGPRAGACCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...CGCCCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGACAGGCCGGGCTGGATaGTGGCGGGCCAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGTGRAG*WRARAA
Trigger: GGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGT...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270517.12
CDS-3UTR CAA 90 bp CCGGGTGGACCCGGCGAGGCGGAAGACCACGGGGATCTGGGCCAGGGTTGGGTTAGCTCATGCCTCTGCTaGTCAGACAATCACAACAGC +
Preference number: 5 (lower is better)
Translates to: PGGPGEAEDHGDLGQGWVSSCLC*SDNHNS
Trigger: GCTGTTGTGATTGTCTGACAAGCAGAGGCATGAGCT...AACCCAACCCTGGCCCAGATCCCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CAA 90 bp AACAAAGACAGGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTGATCGGGAACTCCGTCTCCTTGTaGGGCATCACACCTGTGCGT +
Preference number: 5 (lower is better)
Translates to: NKDRPGWIVAGQGGLLIGNSVSL*GITPVR
Trigger: ACGCACAGGTGTGATGCCCAACAAGGAGACGGAGTT...CCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCCTGTCTTTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp ACAGCCCGTGCCCTCGCGCCGGCTCAGACTAGCTCTGGCCCTGCTGCTGTCGCTAGCTCATGCCTCTGCTaGTCAGACAATCACCTACTC +
Preference number: 5 (lower is better)
Translates to: TARALAPAQTSSGPAAVASSCLC*SDNHLL
Trigger: GAGTAGGTGATTGTCTGACAAGCAGAGGCATGAGCT...AGCGACAGCAGCAGGGCCAGAGCTAGTCTGAGCCGGCGCGAGGGCACGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
CDS-3UTR CAA 90 bp CCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGATGTTGAGCAGCTGGTaGTACACAGCCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PAAVAAGCRLLPGGPRAGMLSSW*YTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACAT...CCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp TGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACA +
Preference number: 5 (lower is better)
Translates to: CRGCLELPGGPGEAEDHGSLGKM*SSWLYT
Trigger: TGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGA...CCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS GCA 90 bp AAGTCAATGTGGCCCCGCTTACGCACGCTGTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTCGCCTTGTCCCGTTCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: KSMWPRLRTLCSANF*TVCRKLALSRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCGGGGCCACATTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS-3UTR CAA 90 bp GTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: VMSTRHAHGEDRAFLHFICRKLA*SRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCA...AATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp GGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGTTGAGCAGCTGGTaGTACACAGCCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: GWVGLLQALDPLSHRRLVMLSSW*YTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACAT...GACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp TGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTATGTTGAGCAGCTGGTaGTACACAGCCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: CGATGRRGPQQRQAGLDCMLSSW*YTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACAT...ACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACA +
Preference number: 5 (lower is better)
Translates to: APADSGGVSPAHRWQPEISLGKM*SSWLYT
Trigger: TGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGA...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGAGGAACTCCGTCTCCTaGTTGGGCATCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSRNSVS*LGITPW
Trigger: CCACGGTGTGATGCCCAACAAGGAGACGGAGTTCCT...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSCCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCCCGCCCCTTTTTATTaGAATTCGGAGAACCAGAGG +
Preference number: 5 (lower is better)
Translates to: APADSGGVSPAHRWQPEIPAPFY*NSENQR
Trigger: CCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp CGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCAGGATTCTGGGTCTCTaGGGGGAAAAAGGCAGACGC +
Preference number: 5 (lower is better)
Translates to: RRLVMSTRHAHGEDRAFLRILGL*GEKGRR
Trigger: GCGTCTGCCTTTTTCCCCCAAGAGACCCAGAATCCT...GAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS TCA 90 bp CCCGCTCGACACCATACTCCCGCATCTTGCGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCTTACGCACGCTGTGCTCCGCAAATT +
Preference number: 5 (lower is better)
Translates to: PARHHTPASCAGPGR*SQCGPAYARCAPQI
Trigger: AATTTGCGGAGCACAGCGTGCGTAAGCGGGGCCACATTGACTTCATCTACCTGGCCCTGCGCAAGATGCGGGAGTATGGTGTCGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS GCA 90 bp TTCTGGGTCTCTTGGGGGAAAAAGGCAGACGCGGATTCCAAATCCTaGCCGGTTGCCGACTTGCGGCGTGACCTCTCGCGAGGTCATCTG +
Preference number: 5 (lower is better)
Translates to: FWVSWGKKADADSKS*PVADLRRDLSRGHL
Trigger: CAGATGACCTCGCGAGAGGTCACGCCGCAAGTCGGCAACCGGGCAGGATTTGGAATCCGCGTCTGCCTTTTTCCCCCAAGAGACCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CAA 90 bp GCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGCCAGCTCTGTCTTGTaGCTGGGCGCTGCCATATTG +
Preference number: 5 (lower is better)
Translates to: ALDPLSHRRLVMSTRHAHASSVL*LGAAIL
Trigger: CAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGC...ATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252440.11
CDS-3UTR CAA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACATGTTGAGCAGCTGGTaGTACACAGCCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDMLSSW*YTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACAT...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp CTCTGGCCCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGAACTCCGTCTCCTTGTaGGGCATCACACCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LWPCCCRCRLSSSSWWSSNSVSL*GITPWF
Trigger: GAACCACGGTGTGATGCCCAACAAGGAGACGGAGTT...CGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGGGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000591104.5
CDS-3UTR CAA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCAGGAACTCCGTCTCCTaGTTGGGCATCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSRNSVS*LGITPW
Trigger: CCACGGTGTGATGCCCAACAAGGAGACGGAGTTCCT...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp TGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 5 (lower is better)
Translates to: WVGLLQALDPLSHRRLVMGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...CATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGTGGGCCAGGGTTGGGTaGGTCTCCTGCAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGWARVG*VSCRPW
Trigger: CCAGGGCCTGCAGGAGACCAACCCAACCCTGGCCCA...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp CTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCTGCTGTCGCTGCAGGTaGTCGTCTTCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LVMSTRHAHGEDRAFLHFCCRCR*SSSSWW
Trigger: CCACCAGGAAGAAGACGACAACCTGCAGCGACAGCA...GAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp TGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGTGCACCTGTTGAGTCTTaGGGCAAAGGAACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: CGATGRRGPQQRQAGLDCAPVES*GKGTSG
Trigger: CCCAGAGGTTCCTTTGCCCAAAGACTCAACAGGTGC...ACAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS CCA 90 bp ATGTTGCGAGGCCGGAAGACCTCCTTGGGGAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCCCGCTCGACACCATACTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: MLRGRKTSLGKMLSS*LYTARSRSTPYSRI
Trigger: GATGCGGGAGTATGGTGTCGAGCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS-3UTR CAA 90 bp GGCCAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACA +
Preference number: 5 (lower is better)
Translates to: GQGWVGLLQALDPLSHRRSLGKM*SSWLYT
Trigger: TGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGA...GCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp GCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATGTCAGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: APAMHMAKTGPSSTSLMSGRKTS*GKMLSS
Trigger: GCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC...TGACATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp GTAGATGGTGACCCTGGCACTAAGGTCAGGCTCCATGTGCCGCAGGCCAAACATGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VDGDPGTKVRLHVPQAKHGRKTS*GKMLSS
Trigger: GCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC...ATGTTTGGCCTGCGGCACATGGAGCCTGACCTTAGTGCCAGGGTCACCATCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp CCACTTAGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAACTCCGTCTCCTTGTaGGGCATCACACCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PLSHRRLVMSTRHAHGEDNSVSL*GITPWF
Trigger: GAACCACGGTGTGATGCCCAACAAGGAGACGGAGTT...GTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCTAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp AGCCATCGTCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: SHRRLVMSTRHAHGEDRADLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...GGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGACGATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CCTGCTGCTGTCGCTGCAGGTTGTCGTCTTCTTCCTGGTGGTCCTCGGGCAGGGGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PAAVAAGCRLLPGGPRAGDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...CCCTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGGGATCTGGGCCAGGGTaGGGTTGGTCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGGSGPG*GWSPAG
Trigger: GCCTGCAGGAGACCAACCCAACCCTGGCCCAGATCC...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp TGCAGAGGATGTCTGGAGCTCCCGGGTGGACCCGGCGAGGCGGAAGACCACGGGCAGGAAAACATTGATTaGCTGTACACTCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: CRGCLELPGGPGEAEDHGQENID*LYTQRA
Trigger: TGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCTG...CCCGTGGTCTTCCGCCTCGCCGGGTCCACCCGGGAGCTCCAGACATCCTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCAGGCCAGCTCTGTCTaGTTGCTGGGCGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQQASSV*LLGAAI
Trigger: TATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTG...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQGRKTS*GKMLSS
Trigger: GCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAATGCGCTGGATGATGTaGCGAGGCCGGAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAMRWMM*RGRKTS
Trigger: GGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp GGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GLLQALDPLSHRRLVMSTDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...GGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000591104.5
ENST00000592312.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GCGCCTGCAGATTCTGGAGGGGTCTCGCCTGCCCATCGCTGGCAGCCCGAGATCCAGGAAAACATTGATTaGCTGTACACTCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: APADSGGVSPAHRWQPEIQENID*LYTQRA
Trigger: TGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCTG...GATCTCGGGCTGCCAGCGATGGGCAGGCGAGACCCCTCCAGAATCTGCAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp CAGGGTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGCCCGCCCCTTTTTATTaGAATTCGGAGAACCAGAGG +
Preference number: 5 (lower is better)
Translates to: QGWVGLLQALDPLSHRRLPAPFY*NSENQR
Trigger: CCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGG...CAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
CDS-3UTR CAA 90 bp ATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGCCCAGAAGGAACTCCGTCTCCTaGTTGGGCATCACACCTGTG +
Preference number: 5 (lower is better)
Translates to: IPGVETYMPCALQGTRPRRNSVS*LGITPV
Trigger: CACAGGTGTGATGCCCAACAAGGAGACGGAGTTCCT...TCTGGGCCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp GCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCATTGATGTCAGGTAAGGTTAGAGACTaGGCTGCCCCCATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: APAMHMAKTGPSSTSLMSGKVRD*AAPMLS
Trigger: CGAGAGCATGGGGGCAGCCAAGTCTCTAACCTTACC...TGACATCAATGAAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592312.5
CDS-3UTR CAA 90 bp GCCTGGGTAAGGTTAGAGACTTGGCTGCCCCCATGCTCTCGGACTTACCTACGAGGTAAGGTTAGAGACTaGGCTGCCCCCATGCTCTCG +
Preference number: 5 (lower is better)
Translates to: AWVRLETWLPPCSRTYLRGKVRD*AAPMLS
Trigger: CGAGAGCATGGGGGCAGCCAAGTCTCTAACCTTACC...TCGTAGGTAAGTCCGAGAGCATGGGGGCAGCCAAGTCTCTAACCTTACCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp CAACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGCCAGCTCTGTCTTGTaGCTGGGCGCTGCCATATTG +
Preference number: 5 (lower is better)
Translates to: QQRSRPFLFEFGEPEAPAASSVL*LGAAIL
Trigger: CAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGC...TGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp CGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCTGGAGGGCAGGCCAGCTCTGTCTaGTTGCTGGGCGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: RPFLFEFGEPEAPADSGGQASSV*LLGAAI
Trigger: TATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTG...CCCTCCAGAATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp GTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCAGCTCATGCCTCTGCTaGTCAGACAATCACCTACTC +
Preference number: 5 (lower is better)
Translates to: VGLLQALDPLSHRRLVMSSSCLC*SDNHLL
Trigger: GAGTAGGTGATTGTCTGACAAGCAGAGGCATGAGCT...GCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000588998.5
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGTTGAGCAGCTGGTaGTACACAGCCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQMLSSW*YTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACAT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp TGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACA +
Preference number: 5 (lower is better)
Translates to: WVGLLQALDPLSHRRLVMSLGKM*SSWLYT
Trigger: TGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGA...CATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000591104.5
ENST00000592312.5
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGAGGAACTCCGTCTCCTaGTTGGGCATCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQRNSVS*LGITPW
Trigger: CCACGGTGTGATGCCCAACAAGGAGACGGAGTTCCT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp TCTGAGGATGTGGTAATACACACACTTGTTGCGGAGCCACAGGGAGAAGGGGCCGGCACTGGGAAGGGGTaGACGTTCATGAATCGAGGG +
Preference number: 5 (lower is better)
Translates to: SEDVVIHTLVAEPQGEGAGTGKG*TFMNRG
Trigger: CCCTCGATTCATGAACGTCAACCCCTTCCCAGTGCC...GGCCCCTTCTCCCTGTGGCTCCGCAACAAGTGTGTGTATTACCACATCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp TCGCCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCAACAATCACAACAGCTTaGAAACCGGCTGCCAGGATT +
Preference number: 5 (lower is better)
Translates to: SPGHEHPPCTWRRQGLPPTITTA*KPAARI
Trigger: AATCCTGGCAGCCGGTTTCAAAGCTGTTGTGATTGT...TGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS-3UTR CAA 90 bp CTCTGGATTCCTGGTGTGGAGACATACATGCCCTGTGCCCTGCAAGGGACTCGGTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACA +
Preference number: 5 (lower is better)
Translates to: LWIPGVETYMPCALQGTRSLGKM*SSWLYT
Trigger: TGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGA...CCGAGTCCCTTGCAGGGCACAGGGCATGTATGTCTCCACACCAGGAATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGAACTCCGTCTCCTTGTaGGGCATCACACCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQNSVSL*GITPWF
Trigger: GAACCACGGTGTGATGCCCAACAAGGAGACGGAGTT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252440.11
ENST00000270517.12
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGAGCTCATGCCTCTGCTaGTCAGACAATCACCTACTC +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQSSCLC*SDNHLL
Trigger: GAGTAGGTGATTGTCTGACAAGCAGAGGCATGAGCT...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp AACAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: NSAPAPFYLNSENQRRLQDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...CTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp CAGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: QRSRPFLFEFGEPEAPADDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...ATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS-3UTR CAA 90 bp CCTGGTCATGAGCACCCGCCATGCACATGGCGAAGACAGGGCCTTCCTCCACTTCAGGAAAACATTGATTaGCTGTACACTCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGHEHPPCTWRRQGLPPLQENID*LYTQRA
Trigger: TGCCCTTTGAGTGTACAGCAAATCAATGTTTTCCTG...AAGTGGAGGAAGGCCCTGTCTTCGCCATGTGCATGGCGGGTGCTCATGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp GGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCATGAGCACCCCAAGCAGGAAAACATaGATTTGCTGTACACTCAAA +
Preference number: 5 (lower is better)
Translates to: GLLQALDPLSHRRLVMSTPSRKT*ICCTLK
Trigger: TTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTGG...GGTGCTCATGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp TTGCGGAGCCACAGGGAGAAGGGGCCCTCAACAAAGACAGGCCGGGCTGGATTGCCAAGCAGGAAAACATaGATTTGCTGTACACTCAAA +
Preference number: 5 (lower is better)
Translates to: LRSHREKGPSTKTGRAGLPSRKT*ICCTLK
Trigger: TTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTGG...CAATCCAGCCCGGCCTGTCTTTGTTGAGGGCCCCTTCTCCCTGTGGCTCCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592571.1
CDS-3UTR CAA 90 bp AAGGGGTTGACGTTCATGAATCGAGGGAACCACAGCTTCAGGCGCACCAACTTGGATCTGCTGCACCTGTaGAGTCTTTGGGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KGLTFMNRGNHSFRRTNLDLLHL*SLWAKE
Trigger: TTCCTTTGCCCAAAGACTCAACAGGTGCAGCAGATC...CAAGTTGGTGCGCCTGAAGCTGTGGTTCCCTCGATTCATGAACGTCAACCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS-3UTR CAA 90 bp GTTGGGTTGGTCTCCTGCAGGCCCTGGATCCACTTAGCCATCGTCGCCTGGTCACCAAGCAGGAAAACATaGATTTGCTGTACACTCAAA +
Preference number: 5 (lower is better)
Translates to: VGLVSCRPWIHLAIVAWSPSRKT*ICCTLK
Trigger: TTTGAGTGTACAGCAAATCAATGTTTTCCTGCTTGG...TGACCAGGCGACGATGGCTAAGTGGATCCAGGGCCTGCAGGAGACCAACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000588998.5
ENST00000592571.1
CDS-3UTR CAA 90 bp AGCGCTCCCGCCCCTTTTTATTTGAATTCGGAGAACCAGAGGCGCCTGCAGATTCCCGCCCCTTTTTATTaGAATTCGGAGAACCAGAGG +
Preference number: 5 (lower is better)
Translates to: SAPAPFYLNSENQRRLQIPAPFY*NSENQR
Trigger: CCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGG...AATCTGCAGGCGCCTCTGGTTCTCCGAATTCAAATAAAAAGGGGCGGGAGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000588998.5
CDS TCA 72 bp GGCCGGGCTGGATTGTGGCGGGCCAGGGCGGCCTGCTaGTCGGGACTCTGGATTCCTACGATGTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GRAGLWRARAAC*SGLWIPTMWGW
Trigger: CCAGCCCCACATCGTAGGAATCCAGAGTCCCGATCAGCAGGCCGCCCTGGCCCGCCACAATCCAGCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270517.12
ENST00000417981.6
ENST00000585318.5
ENST00000591352.1
ENST00000592571.1
CDS GCA 72 bp GCTGGGAACCAGGGACTGTTCAGAGCTATGGGCAGCTaGGCTGCAGTGGAGGCCCCGAGGGAGCCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: AGNQGLFRAMGS*AAVEAPREPAR
Trigger: CCTCGCCGGCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS CAA 90 bp CCTACTCACGCGGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTaGCTGGGCGCTGCCATATTGGCCCAGAGAGCGTCCGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: PTHAASRGLQASSVL*LGAAILAQRASGSG
Trigger: CCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCCGCGTGAGTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS GCA 72 bp CGGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTTaGTGGGCGCTGCCATATTGGCCCAGAGAGCGTCCG +
Preference number: 6 (lower is better)
Translates to: RPAADSRPALSC*WALPYWPRERP
Trigger: CGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CCA 72 bp TCCGGTGGGCTGGGAACCAGGGACTGTTCAGAGCTATaGGCAGCTGCGCTGCAGTGGAGGCCCCGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: SGGLGTRDCSEL*AAALQWRPRGS
Trigger: GCTCCCTCGGGGCCTCCACTGCAGCGCAGCTGCCCATAGCTCTGAACAGTCCCTGGTTCCCAGCCCACCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS GCA 72 bp AGGTCCTCAAAGGGCACCAGAGCCTTGGTGGGCCTCTaGCGGGGTTCCGGTGGGCTGGGAACCAGGGACTGT +
Preference number: 6 (lower is better)
Translates to: RSSKGTRALVGL*RGSGGLGTRDC
Trigger: ACAGTCCCTGGTTCCCAGCCCACCGGAACCCCGGCAGAGGCCCACCAAGGCTCTGGTGCCCTTTGAGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS CCA 72 bp CCAGCCGCGGACTCCAGGCCAGCTCTGTCTTGTTGCTaGGCGCTGCCATATTGGCCCAGAGAGCGTCCGGGT +
Preference number: 6 (lower is better)
Translates to: PAADSRPALSCC*ALPYWPRERPG
Trigger: ACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CAA 90 bp CGCGGACTCCAGGCCAGCTCTGTCTTGTTGCTGGGCGCTGCCATATaGGCCCAGAGAGCGTCCGGGTCAGGGAGCTCCAGGGAGGTAGCA +
Preference number: 6 (lower is better)
Translates to: RGLQASSVLLLGAAI*AQRASGSGSSREVA
Trigger: TGCTACCTCCCTGGAGCTCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CAA 90 bp TCACCTACTCACGCGGCCAGCCGCGGACTCCAGGCCAGCTCTGTCTaGTTGCTGGGCGCTGCCATATTGGCCCAGAGAGCGTCCGGGTCA +
Preference number: 6 (lower is better)
Translates to: SPTHAASRGLQASSV*LLGAAILAQRASGS
Trigger: TGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTGGAGTCCGCGGCTGGCCGCGTGAGTAGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CCA 72 bp AGGCCAGCTCTGTCTTGTTGCTGGGCGCTGCCATATTaGCCCAGAGAGCGTCCGGGTCAGGGAGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RPALSCCWALPY*PRERPGQGAPG
Trigger: CCCTGGAGCTCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS CAA 72 bp CAGGCCAGCTCTGTCTTGTTGCTGGGCGCTGCCATATaGGCCCAGAGAGCGTCCGGGTCAGGGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: QASSVLLLGAAI*AQRASGSGSSR
Trigger: CCTGGAGCTCCCTGACCCGGACGCTCTCTGGGCCAATATGGCAGCGCCCAGCAACAAGACAGAGCTGGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417981.6
CDS GCA 72 bp AGGAAGCTCGCCTTGTCCCGTTCCCCACCAGGCGCCTaGCCAAACAGGTCCTCAAAGGGCACCAGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: RKLALSRSPPGA*PNRSSKGTRAL
Trigger: CAAGGCTCTGGTGCCCTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGAACGGGACAAGGCGAGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS GCA 72 bp TGGCCCCGCTTACGCACGCTGTGCTCCGCAAATTTCTaGACCGTCTGCAGGAAGCTCGCCTTGTCCCGTTCC +
Preference number: 6 (lower is better)
Translates to: WPRLRTLCSANF*TVCRKLALSRS
Trigger: GGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCACAGCGTGCGTAAGCGGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS CAA 72 bp TCCGCAAATTTCTGCACCGTCTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGCGCCTGCCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SANFCTVCRKLA*SRSPPGACPNR
Trigger: CCTGTTTGGGCAGGCGCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS CAA 90 bp ACGCTGTGCTCCGCAAATTTCTGCACCGTCTGCAGGAAGCTCGCCTaGTCCCGTTCCCCACCAGGCGCCTGCCCAAACAGGTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: TLCSANFCTVCRKLA*SRSPPGACPNRSSK
Trigger: CTTTGAGGACCTGTTTGGGCAGGCGCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCACAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS TCA 72 bp CCTGCTGCCGAGGGTAGTGGACGAAGATGCGCTGGATaGTGTTGCGAGGCCGGAAGACCTCCTTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PAAEGSGRRCAG*CCEAGRPPWGR
Trigger: TCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCACTACCCTCGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS GCA 72 bp TTACGCACGCTGTGCTCCGCAAATTTCTGCACCGTCTaGAGGAAGCTCGCCTTGTCCCGTTCCCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: LRTLCSANFCTV*RKLALSRSPPG
Trigger: GCCTGGTGGGGAACGGGACAAGGCGAGCTTCCTGCAGACGGTGCAGAAATTTGCGGAGCACAGCGTGCGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS GCA 72 bp TCTTGGGGGAAAAAGGCAGACGCGGATTCCAAATCCTaGCCGGTTGCCGACTTGCGGCGTGACCTCTCGCGA +
Preference number: 6 (lower is better)
Translates to: SWGKKADADSKS*PVADLRRDLSR
Trigger: TCGCGAGAGGTCACGCCGCAAGTCGGCAACCGGGCAGGATTTGGAATCCGCGTCTGCCTTTTTCCCCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS CAA 72 bp GGAAAAAGGCAGACGCGGATTCCAAATCCTGCCCGGTaGCCGACTTGCGGCGTGACCTCTCGCGAGGTCATC +
Preference number: 6 (lower is better)
Translates to: GKRQTRIPNPAR*PTCGVTSREVI
Trigger: GATGACCTCGCGAGAGGTCACGCCGCAAGTCGGCAACCGGGCAGGATTTGGAATCCGCGTCTGCCTTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591104.5
CDS TCA 72 bp CACCATACTCCCGCATCTTGCGCAGGGCCAGGTAGATaGAGTCAATGTGGCCCCGCTTACGCACGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: HHTPASCAGPGR*SQCGPAYARCA
Trigger: AGCACAGCGTGCGTAAGCGGGGCCACATTGACTTCATCTACCTGGCCCTGCGCAAGATGCGGGAGTATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
CDS TCA 72 bp TGTTGCGAGGCCGGAAGACCTCCTTGGGGAAGATGTTaGGCAGCTGGTTGTACACAGCCAGGTCCCGCTCGA +
Preference number: 6 (lower is better)
Translates to: CCEAGRPPWGRC*AAGCTQPGPAR
Trigger: TCGAGCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS GCA 72 bp AGGGAGCCGGCGAGGGACAACAGCTTTGAAACCGGCTaGCAGGATTCTGGGTCTCTTGGGGGAAAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: REPARDNSFETG*QDSGSLGGKRQ
Trigger: CTGCCTTTTTCCCCCAAGAGACCCAGAATCCTGGCAGCCGGTTTCAAAGCTGTTGTCCCTCGCCGGCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592665.1
CDS CCA 72 bp GGCCGGAAGACCTCCTTGGGGAAGATGTTGAGCAGCTaGTTGTACACAGCCAGGTCCCGCTCGACACCATAC +
Preference number: 6 (lower is better)
Translates to: GRKTSLGKMLSS*LYTARSRSTPY
Trigger: GTATGGTGTCGAGCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS CAA 72 bp ATGTTGCGAGGCCGGAAGACCTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACAGCCAGGTCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: MLRGRKTSLGKM*SSWLYTARSRS
Trigger: CGAGCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS CAA 90 bp CGCTGGATGATGTTGCGAGGCCGGAAGACCTCCTTGGGGAAGATGTaGAGCAGCTGGTTGTACACAGCCAGGTCCCGCTCGACACCATAC +
Preference number: 6 (lower is better)
Translates to: RWMMLRGRKTSLGKM*SSWLYTARSRSTPY
Trigger: GTATGGTGTCGAGCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACATCATCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS CAA 90 bp TGGACGAAGATGCGCTGGATGATGTTGCGAGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGCTGGTTGTACACAGCCAGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: WTKMRWMMLRGRKTS*GKMLSSWLYTARSR
Trigger: GCGGGACCTGGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCATCTTCGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS CAA 72 bp ATGCGCTGGATGATGTTGCGAGGCCGGAAGACCTCCTaGGGGAAGATGTTGAGCAGCTGGTTGTACACAGCC +
Preference number: 6 (lower is better)
Translates to: MRWMMLRGRKTS*GKMLSSWLYTA
Trigger: GGCTGTGTACAACCAGCTGCTCAACATCTTCCCCAAGGAGGTCTTCCGGCCTCGCAACATCATCCAGCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252440.11
ENST00000270517.12
ENST00000585318.5
ENST00000590480.1
ENST00000591104.5
ENST00000592312.5
ENST00000592665.1
ENST00000593231.1
CDS CCA 72 bp CAAAGATCTGAATCAGCAGGAACTCCGTCTCCTTGTTaGGCATCACACCTGTGCGTGGTTCTCCATCTGCTC +
Preference number: 6 (lower is better)
Translates to: QRSESAGTPSPC*ASHLCVVLHLL
Trigger: GAGCAGATGGAGAACCACGCACAGGTGTGATGCCCAACAAGGAGACGGAGTTCCTGCTGATTCAGATCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593231.1
CDS GCA 72 bp TGCTTGTCAGACAATCACAACAGCTTTGAAACCGGCTaGCAGGATTCTGGGTCTCTTGGGGGAAAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: CLSDNHNSFETG*QDSGSLGGKRQ
Trigger: CTGCCTTTTTCCCCCAAGAGACCCAGAATCCTGGCAGCCGGTTTCAAAGCTGTTGTGATTGTCTGACAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591104.5