Pregenerated sensors for DYNLT4 (Homo sapiens)
Ensembl gene IDs: ENSG00000188396Ensembl transcript IDs: ENST00000339355.3, ENST00000675259.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGGCACGCTGTGCACGCGCAGCCTCCCAGCGCTCCCCGGGCACTaGCTCCGTGCGGTAGGAGGGCGCCACCCAACGGGCGGGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QGTLCTRSLPALPGH*LRAVGGRHPTGGRQ Trigger: CTGGCGCCCGCCCGTTGGGTGGCGCCCTCCTACCGCACGGAGCCAGTGCCCGGGGAGCGCTGGGAGGCTGCGCGTGCACAGCGTGCCCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 90 bp | CAGCCGCGCGGCCTCGTCGCTGGAGTAGCACGCGTCGTGCAGCCCTaGGGCCAGCGCCGCCTCCAGGGCACGCTGTGCACGCGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QPRGLVAGVARVVQP*GQRRLQGTLCTRSL Trigger: GAGGCTGCGCGTGCACAGCGTGCCCTGGAGGCGGCGCTGGCCGCAGGGCTGCACGACGCGTGCTACTCCAGCGACGAGGCCGCGCGGCTG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 90 bp | AGACCGAGGCCAGCCCATCGCGCGCCACGTCCCAGAGCGCACGGCTaGCCACGTGAACGCCCTGGCCCGCGCGCGGCCCCAGCACCACAC | + |
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Preference number: 5 (lower is better) Translates to: RPRPAHRAPRPRAHG*PRERPGPRAAPAPH Trigger: GTGTGGTGCTGGGGCCGCGCGCGGGCCAGGGCGTTCACGTGGTCAGCCGTGCGCTCTGGGACGTGGCGCGCGATGGGCTGGCCTCGGTCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | GGCCAGGCCCAGCATGGAGCCCCGGCGCGAGGCCGGGGCTGGACCTaGACCTGCCGGTCGGGCCTCATCAATGCTGGGCAGGCAGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GQAQHGAPARGRGWT*TCRSGLINAGQAAS Trigger: CGAGGCTGCCTGCCCAGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAGCCCCGGCCTCGCGCCGGGGCTCCATGCTGGGCCTGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 90 bp | GCCAGCCCATCGCGCGCCACGTCCCAGAGCGCACGGCTGACCACGTaGACGCCCTGGCCCGCGCGCGGCCCCAGCACCACACTGCATACC | + |
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Preference number: 5 (lower is better) Translates to: ASPSRATSQSARLTT*TPWPARGPSTTLHT Trigger: GGTATGCAGTGTGGTGCTGGGGCCGCGCGCGGGCCAGGGCGTTCACGTGGTCAGCCGTGCGCTCTGGGACGTGGCGCGCGATGGGCTGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | GGCAGCCTCGGGGCCGCACCGGTGAGGGTTTCCGCCCGGAGTCTTTaGCATTCTCCTCCTCCTGGCGTCCCGGGGGCAGAGGCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSLGAAPVRVSARSL*HSPPPGVPGAEACW Trigger: CCAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCCGAGGCTGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | GCCCGCGCGCGGCCCCAGCACCACACTGCATACCAGCTTGTAGCGTaGCGGGCTGAGCTCGCGCAGGCGAACGTGCACCTGCTCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ARARPQHHTAYQLVA*RAELAQANVHLLAE Trigger: CTCTGCGAGCAGGTGCACGTTCGCCTGCGCGAGCTCAGCCCGCCACGCTACAAGCTGGTATGCAGTGTGGTGCTGGGGCCGCGCGCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 90 bp | GCGGCCCCAGCACCACACTGCATACCAGCTTGTAGCGTGGCGGGCTaGGCTCGCGCAGGCGAACGTGCACCTGCTCGCAGAGCTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: AAPAPHCIPACSVAG*ARAGERAPARRAPA Trigger: TGCGGGAGCTCTGCGAGCAGGTGCACGTTCGCCTGCGCGAGCTCAGCCCGCCACGCTACAAGCTGGTATGCAGTGTGGTGCTGGGGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | CGCAGTAGAGCCCGTGGACCGTGGCCACCGCGAAGAGCGAGGTGTTaGTGTAGGAGACCGAGGCCAGCCCATCGCGCGCCACGTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: RSRARGPWPPRRARC*CRRPRPAHRAPRPR Trigger: TCTGGGACGTGGCGCGCGATGGGCTGGCCTCGGTCTCCTACACCAACACCTCGCTCTTCGCGGTGGCCACGGTCCACGGGCTCTACTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 90 bp | TCGGGCCTCATCAATGCTGGGCAGGCAGCCTCGGGGCCGCACCGGTaGGGGTTTCCGCCCGGAGTCTTTGGCATTCTCCTCCTCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SGLINAGQAASGPHR*GFPPGVFGILLLLA Trigger: CGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCCGAGGCTGCCTGCCCAGCATTGATGAGGCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | ACCGGTGAGGGTTTCCGCCCGGAGTCTTTGGCATTCTCCTCCTCCTaGCGTCCCGGGGGCAGAGGCCTGCTGGCCATGGACCTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGEGFRPESLAFSSS*RPGGRGLLAMDLLA Trigger: AGCCAGCAGGTCCATGGCCAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | TGCAGAATTGGACTCCCCCTCACTCGCAGTAGAGCCCGTGGACCGTaGCCACCGCGAAGAGCGAGGTGTTGGTGTAGGAGACCGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CRIGLPLTRSRARGP*PPRRARCWCRRPRP Trigger: TGGCCTCGGTCTCCTACACCAACACCTCGCTCTTCGCGGTGGCCACGGTCCACGGGCTCTACTGCGAGTGAGGGGGAGTCCAATTCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 90 bp | AGTCTTTGGCATTCTCCTCCTCCTGGCGTCCCGGGGGCAGAGGCCTaGTGGCCATGGACCTGCTGGCTGTGTTTTAGAACAAGTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: SLWHSPPPGVPGAEA*WPWTCWLCFRTSGS Trigger: TGATCCACTTGTTCTAAAACACAGCCAGCAGGTCCATGGCCAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 90 bp | GGGGGTGTTGAATCCAGTCATCTTCCACCCAGATCTACTCTAGGGTaGCTGGCACAAAGATCTCCCCTACACCTGGCCCAGGCTGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GGVESSHLPPRSTLG*LAQRSPLHLAQAEG Trigger: GCCCTCAGCCTGGGCCAGGTGTAGGGGAGATCTTTGTGCCAGCCACCCTAGAGTAGATCTGGGTGGAAGATGACTGGATTCAACACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS GCA 90 bp | TCTGATCCCACTTCCTCCAGAATCAGTTCTGAGATGGCTGCCCTCTaGTCCCGAAACTCCCTCAGGCACCTGAGTCACCCGCAGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SDPTSSRISSEMAAL*SRNSLRHLSHPQAL Trigger: CAAAGCCTGCGGGTGACTCAGGTGCCTGAGGGAGTTTCGGGAGCAGAGGGCAGCCATCTCAGAACTGATTCTGGAGGAAGTGGGATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS GCA 90 bp | TGGGCACTATGGAAGTTAGCCAGGTACGCTCGGAGTCTTAGAGACTaGCATTTCTCCCTTCCACCCGACTTCTCTGGAAGGAGAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: WALWKLARYARSLRD*HFSLPPDFSGRRGR Trigger: CCTGCCTCTCCTTCCAGAGAAGTCGGGTGGAAGGGAGAAATGGCAGTCTCTAAGACTCCGAGCGTACCTGGCTAACTTCCATAGTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS TCA 72 bp | CCAGCCCATCGCGCGCCACGTCCCAGAGCGCACGGCTaGCCACGTGAACGCCCTGGCCCGCGCGCGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PAHRAPRPRAHG*PRERPGPRAAP Trigger: TGGGGCCGCGCGCGGGCCAGGGCGTTCACGTGGTCAGCCGTGCGCTCTGGGACGTGGCGCGCGATGGGCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 72 bp | TCGCGCGCCACGTCCCAGAGCGCACGGCTGACCACGTaGACGCCCTGGCCCGCGCGCGGCCCCAGCACCACA | + |
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Preference number: 6 (lower is better) Translates to: SRATSQSARLTT*TPWPARGPSTT Trigger: TGTGGTGCTGGGGCCGCGCGCGGGCCAGGGCGTTCACGTGGTCAGCCGTGCGCTCTGGGACGTGGCGCGCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 72 bp | CGTGGCGGGCTGAGCTCGCGCAGGCGAACGTGCACCTaGTCGCAGAGCTCCCGCACCAGCCGCGCGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RGGLSSRRRTCT*SQSSRTSRAAS Trigger: CGAGGCCGCGCGGCTGGTGCGGGAGCTCTGCGAGCAGGTGCACGTTCGCCTGCGCGAGCTCAGCCCGCCACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | AGTTGCGGCGGGAGAAGGACGCGGCCAGGCCCAGCATaGAGCCCCGGCGCGAGGCCGGGGCTGGACCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SCGGRRTRPGPA*SPGARPGLDLD Trigger: GTCCAGGTCCAGCCCCGGCCTCGCGCCGGGGCTCCATGCTGGGCCTGGCCGCGTCCTTCTCCCGCCGCAACT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | GCCCAGGGATGGCCGCTGACCCCCAGGACCCGCGCCTaGCCCGACCAGCGAGTTGCGGCGGGAGAAGGACGC | + |
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Preference number: 6 (lower is better) Translates to: AQGWPLTPRTRA*PDQRVAAGEGR Trigger: GCGTCCTTCTCCCGCCGCAACTCGCTGGTCGGGCCAGGCGCGGGTCCTGGGGGTCAGCGGCCATCCCTGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | CGCAGAGCTCCCGCACCAGCCGCGCGGCCTCGTCGCTaGAGTAGCACGCGTCGTGCAGCCCTGCGGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRAPAPAARPRR*SSTRRAALRPA Trigger: CGCTGGCCGCAGGGCTGCACGACGCGTGCTACTCCAGCGACGAGGCCGCGCGGCTGGTGCGGGAGCTCTGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 72 bp | GGCCTCGTCGCTGGAGTAGCACGCGTCGTGCAGCCCTaGGGCCAGCGCCGCCTCCAGGGCACGCTGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: GLVAGVARVVQP*GQRRLQGTLCT Trigger: CGTGCACAGCGTGCCCTGGAGGCGGCGCTGGCCGCAGGGCTGCACGACGCGTGCTACTCCAGCGACGAGGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 72 bp | GGGCTGGACCTGGACCTGCCGGTCGGGCCTCATCAATaGTGGGCAGGCAGCCTCGGGGCCGCACCGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GLDLDLPVGPHQ*WAGSLGAAPVR Trigger: CCTCACCGGTGCGGCCCCGAGGCTGCCTGCCCAGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | CAGCATGGAGCCCCGGCGCGAGGCCGGGGCTGGACCTaGACCTGCCGGTCGGGCCTCATCAATGCTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QHGAPARGRGWT*TCRSGLINAGQ Trigger: CTGCCCAGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAGCCCCGGCCTCGCGCCGGGGCTCCATGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | CAGGCCCAGCATGGAGCCCCGGCGCGAGGCCGGGGCTaGACCTGGACCTGCCGGTCGGGCCTCATCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: QAQHGAPARGRG*TWTCRSGLINA Trigger: AGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAGCCCCGGCCTCGCGCCGGGGCTCCATGCTGGGCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CAA 90 bp | AGGCAGCCTCGGGGCCGCACCGGTGAGGGTTTCCGCCCGGAGTCTTaGGCATTCTCCTCCTCCTGGCGTCCCGGGGGCAGAGGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RQPRGRTGEGFRPES*AFSSSWRPGGRGLL Trigger: CAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCCGAGGCTGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | GGGGCCGCACCGGTGAGGGTTTCCGCCCGGAGTCTTTaGCATTCTCCTCCTCCTGGCGTCCCGGGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GAAPVRVSARSL*HSPPPGVPGAE Trigger: CTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | CTGGACCTGGACCTGCCGGTCGGGCCTCATCAATGCTaGGCAGGCAGCCTCGGGGCCGCACCGGTGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LDLDLPVGPHQC*AGSLGAAPVRV Trigger: AACCCTCACCGGTGCGGCCCCGAGGCTGCCTGCCCAGCATTGATGAGGCCCGACCGGCAGGTCCAGGTCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | GCCCGTGGACCGTGGCCACCGCGAAGAGCGAGGTGTTaGTGTAGGAGACCGAGGCCAGCCCATCGCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ARGPWPPRRARC*CRRPRPAHRAP Trigger: TGGCGCGCGATGGGCTGGCCTCGGTCTCCTACACCAACACCTCGCTCTTCGCGGTGGCCACGGTCCACGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CAA 72 bp | CGGGGCCGCACCGGTGAGGGTTTCCGCCCGGAGTCTTaGGCATTCTCCTCCTCCTGGCGTCCCGGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGRTGEGFRPES*AFSSSWRPGGR Trigger: TCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | GGTTTCCGCCCGGAGTCTTTGGCATTCTCCTCCTCCTaGCGTCCCGGGGGCAGAGGCCTGCTGGCCATGGAC | + |
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Preference number: 6 (lower is better) Translates to: GFRPESLAFSSS*RPGGRGLLAMD Trigger: GTCCATGGCCAGCAGGCCTCTGCCCCCGGGACGCCAGGAGGAGGAGAATGCCAAAGACTCCGGGCGGAAACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | CGGCCCCAGCACCACACTGCATACCAGCTTGTAGCGTaGCGGGCTGAGCTCGCGCAGGCGAACGTGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RPQHHTAYQLVA*RAELAQANVHL Trigger: CAGGTGCACGTTCGCCTGCGCGAGCTCAGCCCGCCACGCTACAAGCTGGTATGCAGTGTGGTGCTGGGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 72 bp | ATCAATGCTGGGCAGGCAGCCTCGGGGCCGCACCGGTaGGGGTTTCCGCCCGGAGTCTTTGGCATTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: INAGQAASGPHR*GFPPGVFGILL Trigger: GAGGAGAATGCCAAAGACTCCGGGCGGAAACCCTCACCGGTGCGGCCCCGAGGCTGCCTGCCCAGCATTGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS TCA 72 bp | GCACCACACTGCATACCAGCTTGTAGCGTGGCGGGCTaGGCTCGCGCAGGCGAACGTGCACCTGCTCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: APHCIPACSVAG*ARAGERAPARR Trigger: TCTGCGAGCAGGTGCACGTTCGCCTGCGCGAGCTCAGCCCGCCACGCTACAAGCTGGTATGCAGTGTGGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CCA 72 bp | GGACTCCCCCTCACTCGCAGTAGAGCCCGTGGACCGTaGCCACCGCGAAGAGCGAGGTGTTGGTGTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GLPLTRSRARGP*PPRRARCWCRR Trigger: TCTCCTACACCAACACCTCGCTCTTCGCGGTGGCCACGGTCCACGGGCTCTACTGCGAGTGAGGGGGAGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS GCA 72 bp | ACTTCCTCCAGAATCAGTTCTGAGATGGCTGCCCTCTaGTCCCGAAACTCCCTCAGGCACCTGAGTCACCCG | + |
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Preference number: 6 (lower is better) Translates to: TSSRISSEMAAL*SRNSLRHLSHP Trigger: CGGGTGACTCAGGTGCCTGAGGGAGTTTCGGGAGCAGAGGGCAGCCATCTCAGAACTGATTCTGGAGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS GCA 72 bp | AGGAGGCTGCTAGGACTGGGATCCTCGGCTAGTCCTTaGCGACTGAGCTCCTTCTCTGGGCACTATGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RRLLGLGSSASP*RLSSFSGHYGS Trigger: ACTTCCATAGTGCCCAGAGAAGGAGCTCAGTCGGCAAGGACTAGCCGAGGATCCCAGTCCTAGCAGCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS CCA 72 bp | CCTCTGATCCCACTTCCTCCAGAATCAGTTCTGAGATaGCTGCCCTCTGCTCCCGAAACTCCCTCAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: PLIPLPPESVLR*LPSAPETPSGT Trigger: GGTGCCTGAGGGAGTTTCGGGAGCAGAGGGCAGCCATCTCAGAACTGATTCTGGAGGAAGTGGGATCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS CCA 72 bp | GAATCCAGTCATCTTCCACCCAGATCTACTCTAGGGTaGCTGGCACAAAGATCTCCCCTACACCTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ESSHLPPRSTLG*LAQRSPLHLAQ Trigger: CTGGGCCAGGTGTAGGGGAGATCTTTGTGCCAGCCACCCTAGAGTAGATCTGGGTGGAAGATGACTGGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS GCA 72 bp | TGGAAGTTAGCCAGGTACGCTCGGAGTCTTAGAGACTaGCATTTCTCCCTTCCACCCGACTTCTCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: WKLARYARSLRD*HFSLPPDFSGR Trigger: CCTTCCAGAGAAGTCGGGTGGAAGGGAGAAATGGCAGTCTCTAAGACTCCGAGCGTACCTGGCTAACTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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| CDS CAA 72 bp | GGGCCTCCTCCTAGGATAATAAACAATTTTGCAGAATaGGACTCCCCCTCACTCGCAGTAGAGCCCGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GPPPRIINNFAE*DSPSLAVEPVD Trigger: GTCCACGGGCTCTACTGCGAGTGAGGGGGAGTCCAATTCTGCAAAATTGTTTATTATCCTAGGAGGAGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339355.3 ENST00000675259.1 |
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| CDS CAA 72 bp | CAGATGACTCATGAAGCCCCCTTCCACCTTCTGCCTTaGGCCTCTGATCCCACTTCCTCCAGAATCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QMTHEAPFHLLP*ASDPTSSRISS Trigger: AGAACTGATTCTGGAGGAAGTGGGATCAGAGGCCAAAGGCAGAAGGTGGAAGGGGGCTTCATGAGTCATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000675259.1 |
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