RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNLL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000264364

Ensembl transcript IDs: ENST00000579991.3

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCTGATGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTaGTTGCCATCGCTGCCGCCGCCACTGACACCTTCACCATGGCCA +
Preference number: 1 (lower is better)
Translates to: ILMLAPVQNSPSNAA*LPSLPPPLTPSPWP
Trigger: TGGCCATGGTGAAGGTGTCAGTGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp CTCACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTaGCTAAGGCAGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LTPFKVARLGQQGEP*LRQPFSSEKARLPW
Trigger: CCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCTGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp CCTCCCTTAGATTGTCACCACCTTGCCCTTTCCTGCTGTTCCCAGTaGGGAGGGGGACTGAACCCTACAGACTGCATCCTGGGTCTGCCT +
Preference number: 1 (lower is better)
Translates to: PPLDCHHLALSCCSQ*GGGLNPTDCILGLP
Trigger: AGGCAGACCCAGGATGCAGTCTGTAGGGTTCAGTCCCCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCTAAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp TCCTCTCACAGCCCTGCTCCATCTCCTATGTCCTGGCTTCACCACTaGAAGACTGACCTCCTCCAAGGCTCCCAGAAGCTCCTCTTAGCT +
Preference number: 1 (lower is better)
Translates to: SSHSPAPSPMSWLHH*KTDLLQGSQKLLLA
Trigger: AGCTAAGAGGAGCTTCTGGGAGCCTTGGAGGAGGTCAGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGGAGCAGGGCTGTGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp CTTTCCTGCTGTTCCCAGTGGGGAGGGGGACTGAACCCTACAGACTaGATCCTGGGTCTGCCTTGTCATCTGCCATTTGGTTGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: LSCCSQWGGGLNPTD*ILGLPCHLPFGWVQ
Trigger: CTGAACCCAACCAAATGGCAGATGACAAGGCAGACCCAGGATGCAGTCTGTAGGGTTCAGTCCCCCTCCCCACTGGGAACAGCAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp GAGTATACAGTCCATGCAGTAGCACAGCCATTGGAGAGGACATCCTaGTGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTGCT +
Preference number: 1 (lower is better)
Translates to: EYTVHAVAQPLERTS*CWLQCKTVPATPPA
Trigger: AGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAGGATGTCCTCTCCAATGGCTGTGCTACTGCATGGACTGTATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp CACCTCTGGCTCCCTAACACCTCCAAGAGAATTGCAGTCACACGATaGTGGAGTCAGGGGTGGGCAGACACTCTCAGAAGTCTTGGCACT +
Preference number: 1 (lower is better)
Translates to: HLWLPNTSKRIAVTR*WSQGWADTLRSLGT
Trigger: AGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGTTAGGGAGCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp TTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTaGGCCCCGAAAAGTGGAGGCTCATCTCCTCCAGGAAGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: FHSPFSDTCSHTFPS*APKSGGSSPPGSPA
Trigger: TGCAGGGCTTCCTGGAGGAGATGAGCCTCCACTTTTCGGGGCCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp CAGCCCTGCTCCATCTCCTATGTCCTGGCTTCACCACTGCAAGACTaGCCTCCTCCAAGGCTCCCAGAAGCTCCTCTTAGCTCTTTATCA +
Preference number: 1 (lower is better)
Translates to: QPCSISYVLASPLQD*PPPRLPEAPLSSLS
Trigger: TGATAAAGAGCTAAGAGGAGCTTCTGGGAGCCTTGGAGGAGGTCAGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGGAGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp TCCCTGGCCCTCCCAAAGCAGCATCCACCGCCAGGAAGAGGCAGCTaGACAGTTTTAGTTCCACCTCCAGAGACCTATTTCTTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: SLALPKQHPPPGRGS*TVLVPPPETYFFSS
Trigger: TGAGGAAAAGAAATAGGTCTCTGGAGGTGGAACTAAAACTGTGCAGCTGCCTCTTCCTGGCGGTGGATGCTGCTTTGGGAGGGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp CACCACCAAGGAAGGCAGAACCCAGGAGCCCTTAAGGGTGAGTGCTaGTGGTTAGTTTTCCTCTACTTAAGGGGCATAAGCCTAGGCACA +
Preference number: 1 (lower is better)
Translates to: HHQGRQNPGALKGEC*WLVFLYLRGISLGT
Trigger: TGTGCCTAGGCTTATGCCCCTTAAGTAGAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGCTCCTGGGTTCTGCCTTCCTTGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp GTGGAGTCAGGGGTGGGCAGACACTCTCAGAAGTCTTGGCACTGCTaGTTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGAGAAT +
Preference number: 1 (lower is better)
Translates to: VESGVGRHSQKSWHC*FLELCVWATEDSEN
Trigger: ATTCTCTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp AGTTGGGGCTCTAGAGTCTCTCAACTTAATCCCTTAGGACCTCACTaGCCCAGAGGTAGAACTTCTCCCCAAGATCAGCCAACCACCTTC +
Preference number: 1 (lower is better)
Translates to: SWGSRVSQLNPLGPH*PRGRTSPQDQPTTF
Trigger: GAAGGTGGTTGGCTGATCTTGGGGAGAAGTTCTACCTCTGGGGCAGTGAGGTCCTAAGGGATTAAGTTGAGAGACTCTAGAGCCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp ATTTCATCCTCCCATACTGCCAAGCAAGAGTGGCTCAGGCACTCTTaGTTGAATACACCTGGGAGTGACCCTCTCACGCCTTTCAAGGTG +
Preference number: 1 (lower is better)
Translates to: ISSSHTAKQEWLRHS*LNTPGSDPLTPFKV
Trigger: CACCTTGAAAGGCGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTGCTTGGCAGTATGGGAGGATGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp AACACCTCCAAGAGAATTGCAGTCACACGATGGTGGAGTCAGGGGTaGGCAGACACTCTCAGAAGTCTTGGCACTGCTGATTTCTCGAGT +
Preference number: 1 (lower is better)
Translates to: NTSKRIAVTRWWSQG*ADTLRSLGTADFSS
Trigger: ACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp GAGCTTTGGCCCTGGAGACACTCATCCCTGATGAAATGTGAACTGTaGCCTCACTCTCCCTCCCAAAGCTCCAGCTCTGTCAAATTACTC +
Preference number: 1 (lower is better)
Translates to: ELWPWRHSSLMKCEL*PHSPSQSSSSVKLL
Trigger: GAGTAATTTGACAGAGCTGGAGCTTTGGGAGGGAGAGTGAGGCCACAGTTCACATTTCATCAGGGATGAGTGTCTCCAGGGCCAAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp CACCAAGGAAGGCAGAACCCAGGAGCCCTTAAGGGTGAGTGCTGCTaGTTAGTTTTCCTCTACTTAAGGGGCATAAGCCTAGGCACAAAT +
Preference number: 1 (lower is better)
Translates to: HQGRQNPGALKGECC*LVFLYLRGISLGTN
Trigger: ATTTGTGCCTAGGCTTATGCCCCTTAAGTAGAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGCTCCTGGGTTCTGCCTTCCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp CCACCTGGACTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTaGCCCTGGAGACACTCATCCCTGATGAAATGTGAACTGTGGCCT +
Preference number: 1 (lower is better)
Translates to: PPGLPLSSGKKVDEL*PWRHSSLMKCELWP
Trigger: AGGCCACAGTTCACATTTCATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAGTCCAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp GGGTCCCCAGAAGACTGGAGAACAGGATACAAGGAGCAGGGATATTaGTGCTCCTATGGGCACAGTTCTAATAATGGCTGCATTGTTCCG +
Preference number: 1 (lower is better)
Translates to: GSPEDWRTGYKEQGY*CSYGHSSNNGCIVP
Trigger: CGGAACAATGCAGCCATTATTAGAACTGTGCCCATAGGAGCATCAATATCCCTGCTCCTTGTATCCTGTTCTCCAGTCTTCTGGGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp ATTCCACAATTTCCATCTGCTTTCCACAGTCCCTTCAGTGACACATaGTCACATACTTTCCCATCCTGGGCCCCGAAAAGTGGAGGCTCA +
Preference number: 1 (lower is better)
Translates to: IPQFPSAFHSPFSDT*SHTFPSWAPKSGGS
Trigger: TGAGCCTCCACTTTTCGGGGCCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAGATGGAAATTGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp AGAGTATCCATGAGACCCTTGCTGCCAAACCCAGTTAAGCCTTTGTaGATCACAGTGCTAAGTTCTAGTAATGCCACCAGCTACATGGGC +
Preference number: 1 (lower is better)
Translates to: RVSMRPLLPNPVKPL*ITVLSSSNATSYMG
Trigger: GCCCATGTAGCTGGTGGCATTACTAGAACTTAGCACTGTGATGCACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCATGGATACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp GCAAAAGTTGAAGCAGCAAAGCTCAGGCAGGTCCATGACGGCAGCTaGGAAGGTAGCAGTTACTATCCCAAAGACACAAAATATGATTCA +
Preference number: 1 (lower is better)
Translates to: AKVEAAKLRQVHDGS*EGSSYYPKDTKYDS
Trigger: TGAATCATATTTTGTGTCTTTGGGATAGTAACTGCTACCTTCCCAGCTGCCGTCATGGACCTGCCTGAGCTTTGCTGCTTCAACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp GATTCACTACTAAGAGATCTGGGCCTACATCTTAAAGAGTATCCATaGGACCCTTGCTGCCAAACCCAGTTAAGCCTTTGTGCATCACAG +
Preference number: 1 (lower is better)
Translates to: DSLLRDLGLHLKEYP*DPCCQTQLSLCASQ
Trigger: CTGTGATGCACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCATGGATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp ATTAAACTGGGTAAGGATAACAGCGATGGGGGAGAGGTGCTATCTTaGACAGGATGTCAGAAAGCCTCTCTGATAAAAGGATGTTTGAGC +
Preference number: 1 (lower is better)
Translates to: IKLGKDNSDGGEVLS*TGCQKASLIKGCLS
Trigger: GCTCAAACATCCTTTTATCAGAGAGGCTTTCTGACATCCTGTGCAAGATAGCACCTCTCCCCCATCGCTGTTATCCTTACCCAGTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp TCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCATGTTTaGATTCTCTCTAGAAAGCCCAAAACAGCAGTGTCCAGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: SRSCSAYTTTLFLHV*ILSRKPKTAVSSSL
Trigger: GAGGCTGCTGGACACTGCTGTTTTGGGCTTTCTAGAGAGAATGCAAACATGCAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp TCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTaGGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATTTCCT +
Preference number: 1 (lower is better)
Translates to: SNLAWESDQVLHPNC*EHPCDLRQVSSLFP
Trigger: AGGAAATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp AAAATTAGTCCTCTCTGCCACTGCAAATCAAAATCAAACCTGGCCTaGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACATCCA +
Preference number: 1 (lower is better)
Translates to: KISPLCHCKSKSNLA*ESDQVLHPNCCEHP
Trigger: TGGATGTTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTTGATTTGCAGTGGCAGAGAGGACTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp TTTTATCTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTaGGTAGGAGTATTCACGCACATTGATGTGGACACCAAGCCCACA +
Preference number: 1 (lower is better)
Translates to: FYLSYEPLYWHSSSL*VGVFTHIDVDTKPT
Trigger: TGTGGGCTTGGTGTCCACATCAATGTGCGTGAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 90 bp ATAGTGGTTATGGCTGCACAAATTCGTGTATATGCTAAAAACTGCTaGACTGTATACCACCACCAAGTACAGGGCAATCCAGAGTTCAGT +
Preference number: 1 (lower is better)
Translates to: IVVMAAQIRVYAKNC*TVYHHQVQGNPEFS
Trigger: ACTGAACTCTGGATTGCCCTGTACTTGGTGGTGGTATACAGTTCAGCAGTTTTTAGCATATACACGAATTTGTGCAGCCATAACCACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp CTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTaGATGTTTGCATTCTCTCTAGAAAGCCCAAAACAGCAGTGTCCA +
Preference number: 1 (lower is better)
Translates to: LLILDLVLPTLPHCF*MFAFSLESPKQQCP
Trigger: TGGACACTGCTGTTTTGGGCTTTCTAGAGAGAATGCAAACATGCAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 90 bp CAGGCACTGTTCTGTTTACTTGAAGATAAGCAGTTAAGAGAAAAATaGTCTCACAGAGCTTATATTCTAGTTGTCACAGGCCAGAAAGTA +
Preference number: 1 (lower is better)
Translates to: QALFCLLEDKQLREK*SHRAYILVVTGQKV
Trigger: TACTTTCTGGCCTGTGACAACTAGAATATAAGCTCTGTGAGAGCATTTTTCTCTTAACTGCTTATCTTCAAGTAAACAGAACAGTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 90 bp TGCTCATTTGTTTACATATTATCTATGGCTGCTCTCACACTGGAATaGCAGAGTTCAGAAATTGTAATCTGTATACCTAATGTCATGGAC +
Preference number: 1 (lower is better)
Translates to: CSFVYILSMAALTLE*QSSEIVICIPNVMD
Trigger: GTCCATGACATTAGGTATACAGATTACAATTTCTGAACTCTGCCATTCCAGTGTGAGAGCAGCCATAGATAATATGTAAACAAATGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGCCAACACTGTCCCCCTaGAGCCTCCCTGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTPTLSP*SLPGPP
Trigger: GGGAGGGCCAGGGAGGCTGCAGGGGGACAGTGTTGG...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGGCAACGCCGCCTGCTTaGCATCGCTGCCGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGATPPA*HRCRRH
Trigger: GTGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGC...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGAGGTCTCCCCTCCCCTaGCAACATCACAAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRRSPLP*QHHKAS
Trigger: GCTTGCTTTGTGATGTTGGCAGGGGAGGGGAGACCT...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCACACTGCGCTGCCGCCGCCACTaGCACCTTCACCATGGCCAC +
Preference number: 2 (lower is better)
Translates to: LRTNCAPYLPIHPRDSTLRCRRH*HLHHGH
Trigger: GTGGCCATGGTGAAGGTGTCAGTGGCGGCGGCAGCG...CAGTGTGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTATGGTCATCCTGTCCTaGGTGGTCCTCCTAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLAMVILS*VVLLKP
Trigger: AGGCTTTAGGAGGACCACCCAGGACAGGATGACCAT...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCACACCTCCAAGAGAATTaGAGTCACACGATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: HAFQGGKAWAARRAVPKAHLQEN*SHTMVE
Trigger: CTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTG...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTTCCTCCAGGAAGCCCTaGAGGATTAGTCTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLASSRKP*RISLPD
Trigger: ATCTGGAAGACTAATCCTGCAGGGCTTCCTGGAGGA...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCACCACAGTCCCTTCAGTaGCACATGCTCACATACTTT +
Preference number: 2 (lower is better)
Translates to: HAFQGGKAWAARRAVPKAPQSLQ*HMLTYF
Trigger: AAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGG...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTCGAGTATACAGTCCATaGAGTAGCACAGCCATTGGA +
Preference number: 2 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLARVYSP*SSTAIG
Trigger: TCCAATGGCTGTGCTACTGCATGGACTGTATACTCG...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGAAAGTAGATGAGCTTTaGCCCTGGAGACACTCATCC +
Preference number: 2 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRKVDEL*PWRHSS
Trigger: GGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTT...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 90 bp TCACACGATGGTGGAGTCAGGGGTGGGCAGACACTCTCAGAAGTCTaGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGA +
Preference number: 2 (lower is better)
Translates to: SHDGGVRGGQTLSEV*ALLISRVVCLGNRG
Trigger: TCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCATCGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCAGCTCAAACGGCAATaGCCACCCCACCCCAAACCC +
Preference number: 2 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSQLKRQ*PPHPKP
Trigger: GGGTTTGGGGTGGGGTGGTCATTGCCGTTTGAGCTG...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAGCCCTGCTCCAGAAATaGGGGAGAGATGAACACAAA +
Preference number: 2 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKALLQK*GRDEHK
Trigger: TTTGTGTTCATCTCTCCCTCATTTCTGGAGCAGGGC...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTAAGACTGAAAGGAGGTaGGAGAATAATTTAGCGGGG +
Preference number: 2 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLAKTERR*ENNLAG
Trigger: CCCCGCTAAATTATTCTCTCACCTCCTTTCAGTCTT...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCCCCAGCAACGCCGCCTaGTTGCCATCGCTGCCGCCG +
Preference number: 2 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFPSNAA*LPSLPP
Trigger: CGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCTGGG...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCAAACCACCTTCCTAACTaGAGGAACCCTATCTACCTA +
Preference number: 2 (lower is better)
Translates to: HAFQGGKAWAARRAVPKANHLPN*RNPIYL
Trigger: TAGGTAGATAGGGTTCCTCCAGTTAGGAAGGTGGTT...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGAGTGTCTGGGCTAGATaGCAGCAAGGAGGGGACACC +
Preference number: 2 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQSVWAR*QQGGDT
Trigger: GGTGTCCCCTCCTTGCTGTCATCTAGCCCAGACACT...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAACACCAGAAATTCCCTTaGCAGCCAACTAACAACAGG +
Preference number: 2 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKHQKFP*QPTNNR
Trigger: CCTGTTGTTAGTTGGCTGGCAAGGGAATTTCTGGTG...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTACCTTAAATCTAGTCTaGAGGACACTAGAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLATLNLV*RTLEFR
Trigger: CCTGAACTCTAGTGTCCTCCAGACTAGATTTAAGGT...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 90 bp GAGAGGAGTAAGGAGGAGGGAGAGAGGAAAGTATCCTCGCTGTCCTaGCTAAACCAGAGCCCCAAGAGAGGGAACATCAGGGATTCACTA +
Preference number: 2 (lower is better)
Translates to: ERSKEEGERKVSSLS*LNQSPKRGNIRDSL
Trigger: TAGTGAATCCCTGATGTTCCCTCTCTTGGGGCTCTGGTTTAGCAAGGACAGCGAGGATACTTTCCTCTCTCCCTCCTCCTTACTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAATTTGAAGGCGACTCATaGAAATCAGCAGCTCAAACG +
Preference number: 2 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKFEGDS*KSAAQT
Trigger: CGTTTGAGCTGCTGATTTTCATGAGTCGCCTTCAAA...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGAAGTCTTGGCACTGCTaGTTTCTCGAGTTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTKSWHC*FLELCV
Trigger: GACACACAACTCGAGAAATCAGCAGTGCCAAGACTT...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCCTCCCACCAGAGACTaGAACCATCCACAGTCACTG +
Preference number: 2 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQPPTRD*NHPQSL
Trigger: CAGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGTCCTGGCTTCACCACTaGAAGACTGACCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGSWLHH*KTDLLQ
Trigger: TTGGAGGAGGTCAGTCTTGCAGTGGTGAAGCCAGGA...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCACTCCTCTCACAGCCCTaGTCCATCTCCTATGTCCTG +
Preference number: 2 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSLLSQP*SISYVL
Trigger: CAGGACATAGGAGATGGAGCAGGGCTGTGAGAGGAG...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGACACCTTGCCCTTTCCTaGTGTTCCCAGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRHLALS*CSQWGG
Trigger: CCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTG...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTTCAGTATCTAGTGGCTaGTCTTCCCTTCAGTCCCCA +
Preference number: 2 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCSVSSG*SSLQSP
Trigger: TGGGGACTGAAGGGAAGACCAGCCACTAGATACTGA...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACTGGGCCCCGAAAAGTaGAGGCTCATCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCELGPEK*RLISSR
Trigger: CCTGGAGGAGATGAGCCTCCACTTTTCGGGGCCCAG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCCAGCTTTCCATTTCTaGGTGGCCAGACCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQPAFHF*VARPFA
Trigger: AGCAAAGGGTCTGGCCACTCAGAAATGGAAAGCTGG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAAGCACCACTGCCACCATaGCAACCCCTCATCCCCAAA +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEAPLPP*QPLIPK
Trigger: TTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGC...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGCAGCAAGGAGAGCCGTaGCTAAGGCAGCCATTCTCT +
Preference number: 2 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKQQGEP*LRQPFS
Trigger: AGAGAATGGCTGCCTTAGGCACGGCTCTCCTTGCTG...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGTTGGAGAGGACATCCTaGTGCTGGCTCCAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKLERTS*CWLQCK
Trigger: TTTGCACTGGAGCCAGCATCAGGATGTCCTCTCCAA...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCACTACCCCTTTTTCCTTaGCAATCCCAACACTGTCCC +
Preference number: 2 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSLPLFP*QSQHCP
Trigger: GGGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAG...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGGCCCTTAAGGGTGAGTaGTGCTGGTTAGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQALKGE*CWLVFL
Trigger: GAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGC...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 90 bp GGATCTGAGAGATCAAGCAGCTTGTCCACGTTCATCCAGTGGGTGTaGGAGCTGAGATTCGACTCCAGGTCTTCTGATTCTAGATCTTGT +
Preference number: 2 (lower is better)
Translates to: GSERSSSLSTFIQWV*ELRFDSRSSDSRSC
Trigger: ACAAGATCTAGAATCAGAAGACCTGGAGTCGAATCTCAGCTCCAACACCCACTGGATGAACGTGGACAAGCTGCTTGATCTCTCAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCAGACAAGATTTCCCCTaGATCCTCCTCAGAATCTCC +
Preference number: 2 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSRQDFP*ILLRIS
Trigger: GGAGATTCTGAGGAGGATGCAGGGGAAATCTTGTCT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGCATCTGCCATTTGGTTaGGTTCAGTCAAAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKHLPFG*VQSKGV
Trigger: GACCCCCTTTGACTGAACCCAACCAAATGGCAGATG...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAATGCCACCAGCTACATaGGCTTTGCCACTCACCTTC +
Preference number: 2 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRMPPAT*ALPLTF
Trigger: GAAGGTGAGTGGCAAAGCCCATGTAGCTGGTGGCAT...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 90 bp CTTTCTAAATATCCCCAGCTTTCCATTTCTGAGTGGCCAGACCCTTaGCTAAATAGTCTCCAGGTTCAGGAAAGCCGAGAAGGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: LSKYPQLSISEWPDP*LNSLQVQESREGRS
Trigger: ACTCCTCCCTTCTCGGCTTTCCTGAACCTGGAGACTATTTAGCAAAGGGTCTGGCCACTCAGAAATGGAAAGCTGGGGATATTTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 90 bp CCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTaGCCTCCCTTAGATTGTCACCACCTTGCCCTTTCCTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: PQQQRRFPTMLVIIH*PPLDCHHLALSCCS
Trigger: GGAACAGCAGGAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGCAAAGACACAAAATATaGTTCACCTGGCCATCACCA +
Preference number: 2 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGQRHKI*FTWPSP
Trigger: TGGTGATGGCCAGGTGAATCATATTTTGTGTCTTTG...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAAGTATTCACGCACATTaGTGTGGACACCAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRSIHAH*CGHQAH
Trigger: GTGGGCTTGGTGTCCACATCAATGTGCGTGAATACT...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGCTGTGCACCTACCTGTaGAGGAATGTGTTGTTCACA +
Preference number: 2 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKLCTYL*RNVLFT
Trigger: TGTGAACAACACATTCCTGCACAGGTAGGTGCACAG...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGAGGGCAAAGCACCTCTaGCTCCCTAACACCTCCAAG +
Preference number: 2 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLRAKHL*LPNTSK
Trigger: CTTGGAGGTGTTAGGGAGCCAGAGGTGCTTTGCCCT...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACACAGTAGCAGTCTGTaGGTAGGAGTATTCACGCAC +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEHSSSL*VGVFTH
Trigger: GTGCGTGAATACTCCTACCCACAGACTGCTACTGTG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCTCAGGCACTCTTGCTTaGATACACCTGGGAGTGACC +
Preference number: 2 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFSGTLA*IHLGVT
Trigger: GGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGA...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATCCCTTAGGACCTCACTaGCCCAGAGGTAGAACTTCT +
Preference number: 2 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYPLGPH*PRGRTS
Trigger: AGAAGTTCTACCTCTGGGGCAGTGAGGTCCTAAGGG...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACCCTTCAGTGACACATaGTCACATACTTTCCCATCC +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEPFSDT*SHTFPS
Trigger: GGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTGATGAGCTTTGGCCCTaGAGACACTCATCCCTGATG +
Preference number: 2 (lower is better)
Translates to: DSATATKKIPYHAGYYPFDELWP*RHSSLM
Trigger: CATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATC...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACCTACACGAGAGTTTTaGAGGCGACTCATGAAAATC +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEPTREF*RRLMKI
Trigger: GATTTTCATGAGTCGCCTTCAAAACTCTCGTGTAGG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTGCTTTGGGCAAAAGTTaGAGCAGCAAAGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: DSATATKKIPYHAGYYPFALGKS*SSKAQA
Trigger: TGCCTGAGCTTTGCTGCTTCAACTTTTGCCCAAAGC...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATAGGGAAGAAAGTAGATaGGCTTTGGCCCTGGAGACA +
Preference number: 2 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYREESR*ALALET
Trigger: TGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATAAGGAGCAGGGATATTaGTGCTCCTATGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYKEQGY*CSYGHS
Trigger: ACTGTGCCCATAGGAGCATCAATATCCCTGCTCCTT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATCCAGGAAGAGGCAGCTaGACAGTTTTAGTTCCACCT +
Preference number: 2 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYPGRGS*TVLVPP
Trigger: AGGTGGAACTAAAACTGTGCAGCTGCCTCTTCCTGG...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTAGATTGTCACCACCTTaGCCTTTCCTGCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: DSATATKKIPYHAGYYPFRLSPP*PFLLFP
Trigger: TGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCT...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCAGAATCACAGTTCAGTaGAATATTCTCCCTGGTACT +
Preference number: 2 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSRITVQ*NILPGT
Trigger: AGTACCAGGGAGAATATTCCACTGAACTGTGATTCT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCCATCTCCTATGTCCTaGCTTCACCACTGCAAGACT +
Preference number: 2 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLPSPMS*LHHCKT
Trigger: AGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACCAGTTAAGCCTTTGTaGATCACAGTGCTAAGTTCT +
Preference number: 2 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEPVKPL*ITVLSS
Trigger: AGAACTTAGCACTGTGATGCACAAAGGCTTAACTGG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCATTCTATTCCACCCTaGAGACTCTCCACCCTCACC +
Preference number: 2 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKHSIPP*RLSTLT
Trigger: GGTGAGGGTGGAGAGTCTCCAGGGTGGAATAGAATG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGAAGAGACCCAAACAGTaGAGAGGTGCATCAATCAAC +
Preference number: 2 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLKRPKQ*RGASIN
Trigger: GTTGATTGATGCACCTCTGCACTGTTTGGGTCTCTT...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp GGGAACATCAGGGATTCACTACTAAGAGATCTGGGCCTACATCTTAAAGAGTATCTAGGCACAAATAAGTaGTGCTACAGGCCAATCAGT +
Preference number: 2 (lower is better)
Translates to: GNIRDSLLRDLGLHLKEYLGTNK*CYRPIS
Trigger: ACTGATTGGCCTGTAGCAGCACTTATTTGTGCCTAG...ATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATCCCTGATGTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCACTGCGACATACACATaGAATCGAGTATACAGTCCA +
Preference number: 2 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFTATYT*NRVYSP
Trigger: TGGACTGTATACTCGATTTCATGTGTATGTCGCAGT...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGGAGAAAAGGGAGAGGTaGGAGAGATTTCCTAGTGCA +
Preference number: 2 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKEKRER*ERFPSA
Trigger: TGCACTAGGAAATCTCTCCCACCTCTCCCTTTTCTC...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCGAAGATTCCCTACCATaGTGGTTATTATCCATTTGC +
Preference number: 2 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFEDSLP*WLLSIC
Trigger: GCAAATGGATAATAACCAGCATGGTAGGGAATCTTC...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CCA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATCTTTCCATTTCTGAGTaGCCAGACCCTTTGCTAAAT +
Preference number: 2 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNLSISE*PDPLLN
Trigger: ATTTAGCAAAGGGTCTGGCCACTCAGAAATGGAAAG...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR TCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGACTATTGGAAAAAGTTaGTCAGTGTGTGTATGTCTG +
Preference number: 2 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLTIGKS*SVCVCL
Trigger: CAGACATACACACACTGATCAACTTTTTCCAATAGT...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGTTTGGTTTTGTTTACTaGGACATACACATGAAATCG +
Preference number: 2 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLFGFVY*DIHMKS
Trigger: CGATTTCATGTGTATGTCGCAGTAAACAAAACCAAA...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp CTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTaGTTGCCATCGCTGCCGCCGCCACTGACACCTTCA +
Preference number: 3 (lower is better)
Translates to: LAPVQNSPSNAA*LPSLPPPLTPS
Trigger: TGAAGGTGTCAGTGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTAGCAACGCCGCCTGCTaGCCATCGCTGCCGCCGCCA +
Preference number: 3 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCSNAAC*PSLPPP
Trigger: TGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCT...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp GATTGTCACCACCTTGCCCTTTCCTGCTGTTCCCAGTaGGGAGGGGGACTGAACCCTACAGACTGCATCCTG +
Preference number: 3 (lower is better)
Translates to: DCHHLALSCCSQ*GGGLNPTDCIL
Trigger: CAGGATGCAGTCTGTAGGGTTCAGTCCCCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTACACCTCCAAGAGAATaGCAGTCACACGATGGTGGA +
Preference number: 3 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLATPPRE*QSHDGG
Trigger: TCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGT...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp GTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTaGCCCTCTCACGCCTTTCAAGGTGGCAAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: VAQALLLEYTWE*PSHAFQGGKAW
Trigger: CCAAGCCTTGCCACCTTGAAAGGCGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp TTGCCTCCCTTAGATTGTCACCACCTTGCCCTTTCCTaGTGTTCCCAGTGGGGAGGGGGACTGAACCCTACA +
Preference number: 3 (lower is better)
Translates to: LPPLDCHHLALS*CSQWGGGLNPT
Trigger: TGTAGGGTTCAGTCCCCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp TCCATCTCCTATGTCCTGGCTTCACCACTGCAAGACTaGCCTCCTCCAAGGCTCCCAGAAGCTCCTCTTAGC +
Preference number: 3 (lower is better)
Translates to: SISYVLASPLQD*PPPRLPEAPLS
Trigger: GCTAAGAGGAGCTTCTGGGAGCCTTGGAGGAGGTCAGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp CCCTGGAGACACTCATCCCTGATGAAATGTGAACTGTaGCCTCACTCTCCCTCCCAAAGCTCCAGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: PWRHSSLMKCEL*PHSPSQSSSSV
Trigger: GACAGAGCTGGAGCTTTGGGAGGGAGAGTGAGGCCACAGTTCACATTTCATCAGGGATGAGTGTCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp CCCTTCAGTGACACATGCTCACATACTTTCCCATCCTaGGCCCCGAAAAGTGGAGGCTCATCTCCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: PFSDTCSHTFPS*APKSGGSSPPG
Trigger: TCCTGGAGGAGATGAGCCTCCACTTTTCGGGGCCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp GGGGTGGGCAGACACTCTCAGAAGTCTTGGCACTGCTaGTTTCTCGAGTTGTGTGTCTGGGCAACAGAGGAT +
Preference number: 3 (lower is better)
Translates to: GVGRHSQKSWHC*FLELCVWATED
Trigger: ATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp CTCCCAAAGCAGCATCCACCGCCAGGAAGAGGCAGCTaGACAGTTTTAGTTCCACCTCCAGAGACCTATTTC +
Preference number: 3 (lower is better)
Translates to: LPKQHPPPGRGS*TVLVPPPETYF
Trigger: GAAATAGGTCTCTGGAGGTGGAACTAAAACTGTGCAGCTGCCTCTTCCTGGCGGTGGATGCTGCTTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp CTCCCTAACACCTCCAAGAGAATTGCAGTCACACGATaGTGGAGTCAGGGGTGGGCAGACACTCTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: LPNTSKRIAVTR*WSQGWADTLRS
Trigger: ACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGTTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp GGAAGGCAGAACCCAGGAGCCCTTAAGGGTGAGTGCTaGTGGTTAGTTTTCCTCTACTTAAGGGGCATAAGC +
Preference number: 3 (lower is better)
Translates to: GRQNPGALKGEC*WLVFLYLRGIS
Trigger: GCTTATGCCCCTTAAGTAGAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGCTCCTGGGTTCTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp TATTATCCATTTGCCTCCCTTAGATTGTCACCACCTTaGCCTTTCCTGCTGTTCCCAGTGGGGAGGGGGACT +
Preference number: 3 (lower is better)
Translates to: YYPFASLRLSPP*PFLLFPVGRGT
Trigger: AGTCCCCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAATGGATAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp AGGCAGAACCCAGGAGCCCTTAAGGGTGAGTGCTGCTaGTTAGTTTTCCTCTACTTAAGGGGCATAAGCCTA +
Preference number: 3 (lower is better)
Translates to: RQNPGALKGECC*LVFLYLRGISL
Trigger: TAGGCTTATGCCCCTTAAGTAGAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGCTCCTGGGTTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp GAAGCAGCAAAGCTCAGGCAGGTCCATGACGGCAGCTaGGAAGGTAGCAGTTACTATCCCAAAGACACAAAA +
Preference number: 3 (lower is better)
Translates to: EAAKLRQVHDGS*EGSSYYPKDTK
Trigger: TTTTGTGTCTTTGGGATAGTAACTGCTACCTTCCCAGCTGCCGTCATGGACCTGCCTGAGCTTTGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp TCTGAGAGATCAAGCAGCTTGTCCACGTTCATCCAGTaGGTGTTGGAGCTGAGATTCGACTCCAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: SERSSSLSTFIQ*VLELRFDSRSS
Trigger: AGAAGACCTGGAGTCGAATCTCAGCTCCAACACCCACTGGATGAACGTGGACAAGCTGCTTGATCTCTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGTGCCCACTGAAGGGTTaGATAAAGGGAACTCAGTCA +
Preference number: 3 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGCPLKG*IKGTQS
Trigger: TGACTGAGTTCCCTTTATCAAACCCTTCAGTGGGCA...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp ACCTGGACTGCCTCTTTCATCAGGGAAGAAAGTAGATaGGCTTTGGCCCTGGAGACACTCATCCCTGATGAA +
Preference number: 3 (lower is better)
Translates to: TWTASFIREESR*ALALETLIPDE
Trigger: TTCATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAGTCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp GCAGCTTGTCCACGTTCATCCAGTGGGTGTTGGAGCTaGGATTCGACTCCAGGTCTTCTGATTCTAGATCTT +
Preference number: 3 (lower is better)
Translates to: AACPRSSSGCWS*DSTPGLLILDL
Trigger: AAGATCTAGAATCAGAAGACCTGGAGTCGAATCTCAGCTCCAACACCCACTGGATGAACGTGGACAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp TCTAGAGTCTCTCAACTTAATCCCTTAGGACCTCACTaGCCCAGAGGTAGAACTTCTCCCCAAGATCAGCCA +
Preference number: 3 (lower is better)
Translates to: SRVSQLNPLGPH*PRGRTSPQDQP
Trigger: TGGCTGATCTTGGGGAGAAGTTCTACCTCTGGGGCAGTGAGGTCCTAAGGGATTAAGTTGAGAGACTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGACCAGCTACATGGGCTTaGCCACTCACCTTCTCTGAT +
Preference number: 3 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRPATWA*PLTFSD
Trigger: ATCAGAGAAGGTGAGTGGCAAAGCCCATGTAGCTGG...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp GGTAAGGATAACAGCGATGGGGGAGAGGTGCTATCTTaGACAGGATGTCAGAAAGCCTCTCTGATAAAAGGA +
Preference number: 3 (lower is better)
Translates to: GKDNSDGGEVLS*TGCQKASLIKG
Trigger: TCCTTTTATCAGAGAGGCTTTCTGACATCCTGTGCAAGATAGCACCTCTCCCCCATCGCTGTTATCCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp ATGAGACCCTTGCTGCCAAACCCAGTTAAGCCTTTGTaGATCACAGTGCTAAGTTCTAGTAATGCCACCAGC +
Preference number: 3 (lower is better)
Translates to: MRPLLPNPVKPL*ITVLSSSNATS
Trigger: GCTGGTGGCATTACTAGAACTTAGCACTGTGATGCACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp AACTTCTCCCCAAGATCAGCCAACCACCTTCCTAACTaGAGGAACCCTATCTACCTACCTCCAACACTCAAT +
Preference number: 3 (lower is better)
Translates to: NFSPRSANHLPN*RNPIYLPPTLN
Trigger: ATTGAGTGTTGGAGGTAGGTAGATAGGGTTCCTCCAGTTAGGAAGGTGGTTGGCTGATCTTGGGGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp CCTCTCTGCCACTGCAAATCAAAATCAAACCTGGCCTaGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGC +
Preference number: 3 (lower is better)
Translates to: PLCHCKSKSNLA*ESDQVLHPNCC
Trigger: GCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTTGATTTGCAGTGGCAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGATTTGCCTCCCTTAGATaGTCACCACCTTGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRFASLR*SPPCPF
Trigger: GAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAA...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCAAGGAGCAGGGATATaGATGCTCCTATGGGCACAG +
Preference number: 3 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLQGAGI*MLLWAQ
Trigger: CTGTGCCCATAGGAGCATCAATATCCCTGCTCCTTG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTaGCCCTGGAGACACTCATCCCTGATGAAATGTGAA +
Preference number: 3 (lower is better)
Translates to: LPLSSGKKVDEL*PWRHSSLMKCE
Trigger: TTCACATTTCATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTCCTACCCCTTTTTCCTaGACAATCCCAACACTGTCC +
Preference number: 3 (lower is better)
Translates to: DSATATKKIPYHAGYYPFPTPFS*TIPTLS
Trigger: GGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAGG...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp CTAAGAGATCTGGGCCTACATCTTAAAGAGTATCCATaGGACCCTTGCTGCCAAACCCAGTTAAGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: LRDLGLHLKEYP*DPCCQTQLSLC
Trigger: ACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCATGGATACTCTTTAAGATGTAGGCCCAGATCTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR GCA 72 bp CAAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTaGATCCCAATTGTTGCGAACATCCATGTGACCTTA +
Preference number: 3 (lower is better)
Translates to: QNQTWPGSQIKF*IPIVANIHVTL
Trigger: TAAGGTCACATGGATGTTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp TCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTaGGTAGGAGTATTCACGCACATTGATGTGGACACC +
Preference number: 3 (lower is better)
Translates to: SYEPLYWHSSSL*VGVFTHIDVDT
Trigger: GGTGTCCACATCAATGTGCGTGAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp TTAGTCCTCTCTGCCACTGCAAATCAAAATCAAACCTaGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATT +
Preference number: 3 (lower is better)
Translates to: LVLSATANQNQT*PGSQIKFCIPI
Trigger: AATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTTGATTTGCAGTGGCAGAGAGGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGGGGAGAGGTGCTATCTaGCACAGGATGTCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKGRGAI*HRMSES
Trigger: GCTTTCTGACATCCTGTGCAAGATAGCACCTCTCCC...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp AATAATTTAGCGGGGAACCACACCTTAAATCTAGTCTaGAGGACACTAGAGTTCAGGGAACAGAGATCGACA +
Preference number: 3 (lower is better)
Translates to: NNLAGNHTLNLV*RTLEFREQRST
Trigger: TGTCGATCTCTGTTCCCTGAACTCTAGTGTCCTCCAGACTAGATTTAAGGTGTGGTTCCCCGCTAAATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAGGTGGGCCTTTTATTTaGTATAGGGAAAGAAAGAGA +
Preference number: 3 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRGGPFI*YRERKR
Trigger: TCTCTTTCTTTCCCTATACAAAATAAAAGGCCCACC...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp GGGAACATCAGGGATTCACTACTAAGAGATCTGGGCCTACATCTTAAAGAGTATCCCTACACGAGAGTTTaGAAGGCGACTCATGAAAAT +
Preference number: 3 (lower is better)
Translates to: GNIRDSLLRDLGLHLKEYPYTRV*KATHEN
Trigger: ATTTTCATGAGTCGCCTTCAAAACTCTCGTGTAGGG...ATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATCCCTGATGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR TCA 72 bp ATGGCTGCACAAATTCGTGTATATGCTAAAAACTGCTaGACTGTATACCACCACCAAGTACAGGGCAATCCA +
Preference number: 3 (lower is better)
Translates to: MAAQIRVYAKNC*TVYHHQVQGNP
Trigger: TGGATTGCCCTGTACTTGGTGGTGGTATACAGTTCAGCAGTTTTTAGCATATACACGAATTTGTGCAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGACACTCTCAGAAGTCTaGGCACTGCTGATTTCTCGA +
Preference number: 3 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKTLSEV*ALLISR
Trigger: TCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGT...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CCA 72 bp GTGAATGTGTCATTTAGATTAAGGGTTGGTATACTATaGTCCACAGGCCCAATCTGTCCCCTGCTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: VNVSFRLRVGIL*STGPICPLLFK
Trigger: TTTAAAAAGCAGGGGACAGATTGGGCCTGTGGACCATAGTATACCAACCCTTAATCTAAATGACACATTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATGAAAGAGGTTTGGTTTaGTTTACTGCGACATACACA +
Preference number: 3 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYERGLV*FTATYT
Trigger: TGTGTATGTCGCAGTAAACAAAACCAAACCTCTTTC...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR-3UTR CAA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCTGGTTATTATCCATTaGCCTCCCTTAGATTGTCAC +
Preference number: 3 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKLVIIH*PPLDCH
Trigger: GTGACAATCTAAGGGAGGCAAATGGATAATAACCAG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAGCAACGCCGCCTGCTTaGCATCGCTGCCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKATPPA*HRCRRH
Trigger: GTGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGC...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCCGCCCGCTCCGCACTaGCGCCTCACAGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCPPAPH*RLTAPL
Trigger: GAGCGGAGCTGTGAGGCGCCAGTGCGGAGCGGGCGG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGCCTGGGGAGGAGCGATaGCCCGAGGCAGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTPGEER*PEAEHR
Trigger: CCTGTGCTCTGCCTCGGGCCATCGCTCCTCCCCAGG...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAATCTCCATGGCCTGCGTaGCGCAGTCAACGGCATCCT +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKSPWPA*RSQRHP
Trigger: AGGATGCCGTTGACTGCGCCACGCAGGCCATGGAGA...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGATTGCAGTCACACGATaGTGGAGTCAGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRIAVTR*WSQGWA
Trigger: TGCCCACCCCTGACTCCACCATCGTGTGACTGCAAT...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCGCTGCCGCCGCCACTaGCACCTTCACCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSRCRRH*HLHHGH
Trigger: GTGGCCATGGTGAAGGTGTCAGTGGCGGCGGCAGCG...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCCAACACTGTCCCCCTaGAGCCTCCCTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQPTLSP*SLPGPP
Trigger: GGGAGGGCCAGGGAGGCTGCAGGGGGACAGTGTTGG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CTGATGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTGCTTGCCATCGCATTCTATTCCACCCTaGAGACTCTCCACCCTCACC +
Preference number: 4 (lower is better)
Translates to: LMLAPVQNSPSNAACLPSHSIPP*RLSTLT
Trigger: GGTGAGGGTGGAGAGTCTCCAGGGTGGAATAGAATG...CGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTTATAAGGTAGGTCAGTaGTTTCCCAGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLAYKVGQ*FPRAGE
Trigger: CTCCCCAGCCCTGGGAAACCACTGACCTACCTTATA...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTGATGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTGCTTGCCATCGCTACCCCTTTTTCCTTaGCAATCCCAACACTGTCCC +
Preference number: 4 (lower is better)
Translates to: LMLAPVQNSPSNAACLPSLPLFP*QSQHCP
Trigger: GGGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAG...CGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGTTCATCCTCCCATACTaGCAAGCAAGAGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRFILPY*QARVAQ
Trigger: CTGAGCCACTCTTGCTTGGCAGTATGGGAGGATGAA...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp GGTGGAGTCAGGGGTGGGCAGACACTCTCAGAAGTCTaGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGVRGGQTLSEV*ALLISRVVCLG
Trigger: GCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTTCAACGGCATCCTGTTaGATGTCCTCAGACATGTCT +
Preference number: 4 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLASTASC*MSSDMS
Trigger: AGACATGTCTGAGGACATGCAACAGGATGCCGTTGA...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCGAGTATACAGTCCATaGAGTAGCACAGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRRVYSP*SSTAIG
Trigger: TCCAATGGCTGTGCTACTGCATGGACTGTATACTCG...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTCACCAGAAATTCCCTTaGCAGCCAACTAACAACAGG +
Preference number: 4 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLAHQKFP*QPTNNR
Trigger: CCTGTTGTTAGTTGGCTGGCAAGGGAATTTCTGGTG...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCACTGTGCACCTACCTGTaGAGGAATGTGTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: HAFQGGKAWAARRAVPKALCTYL*RNVLFT
Trigger: TGTGAACAACACATTCCTGCACAGGTAGGTGCACAG...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTAGGGGCGGTGTTCCCTaGGCTCCTCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTRGGVP*APPAAA
Trigger: TGCAGCTGCAGGAGGAGCCCAGGGAACACCGCCCCT...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCACAGCTCAAACGGCAATaGCCACCCCACCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSQLKRQ*PPHPKP
Trigger: GGGTTTGGGGTGGGGTGGTCATTGCCGTTTGAGCTG...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGACACACAGGTACACCTaGCCTCAACAGGCAACAGGT +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTTHRYT*PQQATG
Trigger: ACCTGTTGCCTGTTGAGGTCAGGTGTACCTGTGTGT...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGAGGCCGATCGCTCCCTaGCGCGGTCCGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLRPIAP*RGPPLE
Trigger: CTCCAAGGGCGGACCGCGGCAGGGAGCGATCGGCCT...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGTACTTCTCCATGGCCTaGGTGGCGCAGTCAACGGCA +
Preference number: 4 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGYFSMA*VAQSTA
Trigger: TGCCGTTGACTGCGCCACGCAGGCCATGGAGAAGTA...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTCCCAGCAACGCCGCCTaGTTGCCATCGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: DSATATKKIPYHAGYYPFPSNAA*LPSLPP
Trigger: CGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCTGGG...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCAACTGTGTGGCACCACTaGCACCATGCCAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPTVWHH*HHANPS
Trigger: TGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp GGGACTGAACCCTACAGACTGCATCCTGGGTCTGCCTaGTCATCTGCCATTTGGTTGGGTTCAGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GTEPYRLHPGSA*SSAIWLGSVKG
Trigger: CCCTTTGACTGAACCCAACCAAATGGCAGATGACAAGGCAGACCCAGGATGCAGTCTGTAGGGTTCAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp AAGGAGGAGGGAGAGAGGAAAGTATCCTCGCTGTCCTaGCTAAACCAGAGCCCCAAGAGAGGGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: KEEGERKVSSLS*LNQSPKRGNIR
Trigger: CCTGATGTTCCCTCTCTTGGGGCTCTGGTTTAGCAAGGACAGCGAGGATACTTTCCTCTCTCCCTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTACATGTCTGCGTTCTTaGTCACTGCCTTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCTCLRS*SLPSGQ
Trigger: CTGACCGGAAGGCAGTGATCAAGAACGCAGACATGT...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCACACTGAGTGTCTGGGCTAGATaGCAGCAAGGAGGGGACACC +
Preference number: 4 (lower is better)
Translates to: LRTNCAPYLPIHPRDSTLSVWAR*QQGGDT
Trigger: GGTGTCCCCTCCTTGCTGTCATCTAGCCCAGACACT...CAGTGTGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGGCCCTGCTCCAGAAATaGGGGAGAGATGAACACAAA +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTALLQK*GRDEHK
Trigger: TTTGTGTTCATCTCTCCCTCATTTCTGGAGCAGGGC...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCAGTCACTGTCCCTCTaGACTGAGACCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQQSLSL*TETQLQ
Trigger: CTGGAGCTGGGTCTCAGTGCAGAGGGACAGTGACTG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTTCCTGGCTTCACCACTaGAAGACTGACCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCSWLHH*KTDLLQ
Trigger: TTGGAGGAGGTCAGTCTTGCAGTGGTGAAGCCAGGA...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCAAGTCCTCTCTGCCACTaGAAATCAAAATCAAACCTG +
Preference number: 4 (lower is better)
Translates to: HAFQGGKAWAARRAVPKASPLCH*KSKSNL
Trigger: CAGGTTTGATTTTGATTTGCAGTGGCAGAGAGGACT...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGGAGGCGAGTCCGCACTaGGCCCTGGGGAGGAGCGAT +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLEASPH*ALGRSD
Trigger: ATCGCTCCTCCCCAGGGCCCAGTGCGGACTCGCCTC...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGCTGGGCCCCGAAAAGTaGAGGCTCATCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKLGPEK*RLISSR
Trigger: CCTGGAGGAGATGAGCCTCCACTTTTCGGGGCCCAG...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTGGGGAGAAGAGGGAATaGCAAGTGACTGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCGEKRE*QVTANG
Trigger: CCCATTTGCAGTCACTTGCCATTCCCTCTTCTCCCC...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CTGATGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTGCTTGCCATCGGCTCTCACACTGGAATaGCAGAGTTCAGAAATTGTA +
Preference number: 4 (lower is better)
Translates to: LMLAPVQNSPSNAACLPSALTLE*QSSEIV
Trigger: TACAATTTCTGAACTCTGCCATTCCAGTGTGAGAGC...CGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCATGGCCACCTAGCCTaGCTTGAAGAGGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQHGHLA*LEEEDC
Trigger: GCAATCCTCCTCTTCAAGTCAGGCTAGGTGGCCATG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGAAGAGGAGGATTaGAACTTGACCCAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRLEEED*NLTQVK
Trigger: TTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAG...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCAAGGTCTCCCCTCCCCTaGCAACATCACAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSRSPLP*QHHKAS
Trigger: GCTTGCTTTGTGATGTTGGCAGGGGAGGGGAGACCT...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTGCCCTTAAGGGTGAGTaGTGCTGGTTAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCALKGE*CWLVFL
Trigger: GAGGAAAACTAACCAGCAGCACTCACCCTTAAGGGC...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGCCCTTAGGACCTCACTaGCCCAGAGGTAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGPLGPH*PRGRTS
Trigger: AGAAGTTCTACCTCTGGGGCAGTGAGGTCCTAAGGG...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACACCTTGCCCTTTCCTaGTGTTCCCAGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEHLALS*CSQWGG
Trigger: CCCTCCCCACTGGGAACAGCAGGAAAGGGCAAGGTG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCACACTGCAGCAAGGAGAGCCGTaGCTAAGGCAGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LRTNCAPYLPIHPRDSTLQQGEP*LRQPFS
Trigger: AGAGAATGGCTGCCTTAGGCACGGCTCTCCTTGCTG...CAGTGTGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTGAGCAGATGGCAGCATaGTCATCCTGTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTEQMAA*SSCPGW
Trigger: CCACCCAGGACAGGATGACCATGCTGCCATCTGCTC...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTGTCCATGACGGCAGCTaGGAAGGTAGCAGTTACTAT +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCVHDGS*EGSSYY
Trigger: ATAGTAACTGCTACCTTCCCAGCTGCCGTCATGGAC...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCCATTCCATCTGCCATTTGGTTaGGTTCAGTCAAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AATGQSVSSGWSSLQSPFHLPFG*VQSKGV
Trigger: GACCCCCTTTGACTGAACCCAACCAAATGGCAGATG...GAATGGGGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCACAGTAGCAGTCTGTaGGTAGGAGTATTCACGCAC +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCHSSSL*VGVFTH
Trigger: GTGCGTGAATACTCCTACCCACAGACTGCTACTGTG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAACTGCGACATACACATaGAATCGAGTATACAGTCCA +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKTATYT*NRVYSP
Trigger: TGGACTGTATACTCGATTTCATGTGTATGTCGCAGT...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCAAGGGAAGAAAGTAGATaGGCTTTGGCCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPREESR*ALALET
Trigger: TGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCT...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCCACAGTCCCTTCAGTaGCACATGCTCACATACTTT +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCPQSLQ*HMLTYF
Trigger: AAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTCTACCACACTGTTTTTaGATGTTTGCATTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLALPHCF*MFAFSL
Trigger: TAGAGAGAATGCAAACATGCAAAAACAGTGTGGTAG...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCATATTGTACTTCTCCATaGCCTGCGTGGCGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPYCTSP*PAWRSQ
Trigger: TTGACTGCGCCACGCAGGCCATGGAGAAGTACAATA...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTTGGTGGAGTCAGGGGTaGGCAGACACTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTWWSQG*ADTLRS
Trigger: ACTTCTGAGAGTGTCTGCCCACCCCTGACTCCACCA...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTTCACGCCTTTCAAGGTaGCAAGGCTTGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTSRLSR*QGLGSK
Trigger: CTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTGA...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCAGCTTTGGGCAAAAGTTaGAGCAGCAAAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSALGKS*SSKAQA
Trigger: TGCCTGAGCTTTGCTGCTTCAACTTTTGCCCAAAGC...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCAAGGAGCAGGGATATTaGTGCTCCTATGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSKEQGY*CSYGHS
Trigger: ACTGTGCCCATAGGAGCATCAATATCCCTGCTCCTT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTGAATACACCTGGGAGTaGCCCTCTCACGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTEYTWE*PSHAFQ
Trigger: TTGAAAGGCGTGAGAGGGTCACTCCCAGGTGTATTC...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCAGTCCTCAGACATGTCTaGGTTCTTGATCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPVLRHV*VLDHCL
Trigger: AAGGCAGTGATCAAGAACGCAGACATGTCTGAGGAC...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGAGACAAGATTTCCCCTaGATCCTCCTCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGRQDFP*ILLRIS
Trigger: GGAGATTCTGAGGAGGATGCAGGGGAAATCTTGTCT...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCAGATTGTCACCACCTTaGCCTTTCCTGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSRLSPP*PFLLFP
Trigger: TGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAAGAATCACAGTTCAGTaGAATATTCTCCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKRITVQ*NILPGT
Trigger: AGTACCAGGGAGAATATTCCACTGAACTGTGATTCT...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCTCGAGTTGTGTGTCTaGGCAACAGAGGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQLELCV*ATEDSE
Trigger: CTCTGAATCCTCTGTTGCCCAGACACACAACTCGAG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACATACTTTCCCATCCTaGGCCCCGAAAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEHTFPS*APKSGG
Trigger: GCCTCCACTTTTCGGGGCCCAGGATGGGAAAGTATG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GGGAACATCAGGGATTCACTACTAAGAGATCTGGGCCTACATCTTAAAGAGTATCAAGGTGGCAAGGCTTaGGCAGCAAGGAGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GNIRDSLLRDLGLHLKEYQGGKA*AARRAV
Trigger: CACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTG...ATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATCCCTGATGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAAACCTGGGGTTCTGCTaGTTCTCTTTTATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKNLGFC*FSFIFL
Trigger: AAGAAAGATAAAAGAGAACCAGCAGAACCCCAGGTT...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAAGCAAGTGACTGCAAATaGGTACATGATTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKASDCK*VHDFFW
Trigger: CCAAAAGAAATCATGTACCCATTTGCAGTCACTTGC...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGCCAAGTAAAAATAGATaGAGTGCTTTGTCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTPSKNR*SALSRV
Trigger: CACACGAGACAAAGCACTTCATCTATTTTTACTTGG...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCAAAGACACAAAATATaGTTCACCTGGCCATCACCA +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCQRHKI*FTWPSP
Trigger: TGGTGATGGCCAGGTGAATCATATTTTGTGTCTTTG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCTGCAAATGGGTACATaGTTTCTTTTGGGGGTGATA +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCLQMGT*FLLGVI
Trigger: TATCACCCCCAAAAGAAATCATGTACCCATTTGCAG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCAAGCAGTAACAGAAGTTaGGGCTCTAGAGTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPSSNRS*GSRVSQ
Trigger: TTGAGAGACTCTAGAGCCCCAACTTCTGTTACTGCT...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCAAAGTAGATGAGCTTTaGCCCTGGAGACACTCATCC +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSKVDEL*PWRHSS
Trigger: GGATGAGTGTCTCCAGGGCCAAAGCTCATCTACTTT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGTTGTCATCTGCCATTTaGTTGGGTTCAGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGLSSAI*LGSVKG
Trigger: CCCTTTGACTGAACCCAACCAAATGGCAGATGACAA...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTTATGAACCTCTATATTaGCACAGTAGCAGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCYEPLY*HSSSLW
Trigger: CCACAGACTGCTACTGTGCCAATATAGAGGTTCATA...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTGTGGTTTCCCAGGGCTaGGGAGAAGAGGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: DSATATKKIPYHAGYYPFVVSQG*GEEGMA
Trigger: TGCCATTCCCTCTTCTCCCCAGCCCTGGGAAACCAC...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCGCTGGAAGACAGAGGTaGGAGGGAGAATTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSAGRQR*EGEFLL
Trigger: AAGCAAAAATTCTCCCTCCCACCTCTGTCTTCCAGC...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp TATCCCCAGCTTTCCATTTCTGAGTGGCCAGACCCTTaGCTAAATAGTCTCCAGGTTCAGGAAAGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: YPQLSISEWPDP*LNSLQVQESRE
Trigger: TTCTCGGCTTTCCTGAACCTGGAGACTATTTAGCAAAGGGTCTGGCCACTCAGAAATGGAAAGCTGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp TACCATGCTGGTTATTATCCATTTGCCTCCCTTAGATaGTCACCACCTTGCCCTTTCCTGCTGTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: YHAGYYPFASLR*SPPCPFLLFPV
Trigger: CACTGGGAACAGCAGGAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAATGGATAATAACCAGCATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp TCCATGAGACCCTTGCTGCCAAACCCAGTTAAGCCTTaGTGCATCACAGTGCTAAGTTCTAGTAATGCCACC +
Preference number: 4 (lower is better)
Translates to: SMRPLLPNPVKP*CITVLSSSNAT
Trigger: GGTGGCATTACTAGAACTTAGCACTGTGATGCACAAAGGCTTAACTGGGTTTGGCAGCAAGGGTCTCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAACCACCTAGCCTGACTTaGAGAGGAGGATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEPPSLT*RGGLQL
Trigger: AAGTTGCAATCCTCCTCTTCAAGTCAGGCTAGGTGG...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCACACTGAAGAAATCGAGGATCTaGGAGATCAAGCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LRTNCAPYLPIHPRDSTLKKSRI*EIKQLV
Trigger: GACAAGCTGCTTGATCTCTCAGATCCTCGATTTCTT...CAGTGTGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGATGCGTTCTTGATCACTaGCTTCCGGTCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRCVLDH*LPVRHG
Trigger: ACCATGTCTGACCGGAAGGCAGTGATCAAGAACGCA...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCCTCCCACCAGAGACTaGAACCATCCACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLPPTRD*NHPQSL
Trigger: CAGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCTAGGCACAAATAAGTaGTGCTACAGGCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSLGTNK*CYRPIS
Trigger: ACTGATTGGCCTGTAGCAGCACTTATTTGTGCCTAG...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCACTCAATAGCTCATTaGCCAGTTCATTTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCHSIAH*PVHFLD
Trigger: ATCAAGGAAATGAACTGGGCAATGAGCTATTGAGTG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTTGTGTTGTTCACAGATaGCACCTGGACTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTCVVHR*HLDCLF
Trigger: AAAGAGGCAGTCCAGGTGGCATCTGTGAACAACACA...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTCCCTTCAGTGACACATaGTCACATACTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTPFSDT*SHTFPS
Trigger: GGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGG...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp GCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCCATTCTCTCATAACATTAACTaGTTCAAGGAAGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: AATGQSVSSGWSSLQSPFSHNIN*FKEGNP
Trigger: GGGGTTACCTTCCTTGAAGCAGTTAATGTTATGAGA...GAATGGGGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATAGGGCAAAGCACCTCTaGCTCCCTAACACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYRAKHL*LPNTSK
Trigger: CTTGGAGGTGTTAGGGAGCCAGAGGTGCTTTGCCCT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCAAACCACCTTCCTAACTaGAGGAACCCTATCTACCTA +
Preference number: 4 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSNHLPN*RNPIYL
Trigger: TAGGTAGATAGGGTTCCTCCAGTTAGGAAGGTGGTT...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATTTGGAGAGGACATCCTaGTGCTGGCTCCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYLERTS*CWLQCK
Trigger: TTTGCACTGGAGCCAGCATCAGGATGTCCTCTCCAA...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAAAGTCTTGGCACTGCTaGTTTCTCGAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRKSWHC*FLELCV
Trigger: GACACACAACTCGAGAAATCAGCAGTGCCAAGACTT...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTAAGACTGAAAGGAGGTaGGAGAATAATTTAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTKTERR*ENNLAG
Trigger: CCCCGCTAAATTATTCTCTCACCTCCTTTCAGTCTT...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGTCAGGCACTCTTGCTTaGATACACCTGGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLSGTLA*IHLGVT
Trigger: GGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGA...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTAAGAGACCCAAACAGTaGAGAGGTGCATCAATCAAC +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTKRPKQ*RGASIN
Trigger: GTTGATTGATGCACCTCTGCACTGTTTGGGTCTCTT...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCAGGAATGGCAAGTGACTaGAAATGGGTACATGATTTC +
Preference number: 4 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSGMASD*KWVHDF
Trigger: GAAATCATGTACCCATTTGCAGTCACTTGCCATTCC...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGCAAAGTACTGATAAATaGTACAGCACAAATGAACCT +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTQSTDK*YSTNEP
Trigger: AGGTTCATTTGTGCTGTAGCATTTATCAGTACTTTG...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATATGGTCATCCTGTCCTaGGTGGTCCTCCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYMVILS*VVLLKP
Trigger: AGGCTTTAGGAGGACCACCCAGGACAGGATGACCAT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp AGTCTTGGCACTGCTGATTTCTCGAGTTGTGTGTCTGGGCAACAGAGGATTCAGCTTTCCATTTCTGAGTaGCCAGACCCTTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SLGTADFSSCVSGQQRIQLSISE*PDPLLN
Trigger: ATTTAGCAAAGGGTCTGGCCACTCAGAAATGGAAAG...CTGAATCCTCTGTTGCCCAGACACACAACTCGAGAAATCAGCAGTGCCAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATGATGAGCTTTGGCCCTaGAGACACTCATCCCTGATG +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYDELWP*RHSSLM
Trigger: CATCAGGGATGAGTGTCTCCAGGGCCAAAGCTCATC...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGATGGCTGCTCTCACACTaGAATGGCAGAGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRWLLSH*NGRVQK
Trigger: TTTCTGAACTCTGCCATTCCAGTGTGAGAGCAGCCA...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGTTTACATATTATCTATaGCTGCTCTCACACTGGAAT +
Preference number: 4 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTFTYYL*LLSHWN
Trigger: ATTCCAGTGTGAGAGCAGCCATAGATAATATGTAAA...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp AAAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGATTTGAAGGCGACTCATaGAAATCAGCAGCTCAAACG +
Preference number: 4 (lower is better)
Translates to: KIKPGLGVRSSSASQLLRFEGDS*KSAAQT
Trigger: CGTTTGAGCTGCTGATTTTCATGAGTCGCCTTCAAA...TCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCCAGGAAGAGGCAGCTaGACAGTTTTAGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLPGRGS*TVLVPP
Trigger: AGGTGGAACTAAAACTGTGCAGCTGCCTCTTCCTGG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCTCCTCTCACAGCCCTaGTCCATCTCCTATGTCCTG +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKLLSQP*SISYVL
Trigger: CAGGACATAGGAGATGGAGCAGGGCTGTGAGAGGAG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATTCCTCCAGGAAGCCCTaGAGGATTAGTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYSSRKP*RISLPD
Trigger: ATCTGGAAGACTAATCCTGCAGGGCTTCCTGGAGGA...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCCTTCCGGTCAGACATaGTGTGACACTTCACGGAGG +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKPSGQT*CDTSRR
Trigger: CCTCCGTGAAGTGTCACACCATGTCTGACCGGAAGG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTCCATCTCCTATGTCCTaGCTTCACCACTGCAAGACT +
Preference number: 4 (lower is better)
Translates to: DSATATKKIPYHAGYYPFPSPMS*LHHCKT
Trigger: AGTCTTGCAGTGGTGAAGCCAGGACATAGGAGATGG...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGTCAGTATCTAGTGGCTaGTCTTCCCTTCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLSVSSG*SSLQSP
Trigger: TGGGGACTGAAGGGAAGACCAGCCACTAGATACTGA...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATGGGTCCCCAGAAGACTaGAGAACAGGATACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNGSPED*RTGYKE
Trigger: CTCCTTGTATCCTGTTCTCCAGTCTTCTGGGGACCC...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp CAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTaGCCTCCCTTAGATTGTCACCACCTTGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QRRFPTMLVIIH*PPLDCHHLALS
Trigger: GGAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp GGGAACATCAGGGATTCACTACTAAGAGATCTGGGCCTACATCTTAAAGAGTATGCTTTGTCTCGTGTGTaGCGTAGCTGCCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: GNIRDSLLRDLGLHLKEYALSRV*RSCQNF
Trigger: GAAATTTTGGCAGCTACGTCACACACGAGACAAAGC...ATACTCTTTAAGATGTAGGCCCAGATCTCTTAGTAGTGAATCCCTGATGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCACTATTGGAAAAAGTTaGTCAGTGTGTGTATGTCTG +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSTIGKS*SVCVCL
Trigger: CAGACATACACACACTGATCAACTTTTTCCAATAGT...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCTTAAAGAGTATCCATaGGACCCTTGCTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLLKEYP*DPCCQT
Trigger: GGTTTGGCAGCAAGGGTCTCATGGATACTCTTTAAG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATAGTATTCACGCACATTaGTGTGGACACCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNSIHAH*CGHQAH
Trigger: GTGGGCTTGGTGTCCACATCAATGTGCGTGAATACT...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCGCATTTTCACATACATaGTGTCATTTGATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSAFSHT*CHLIFP
Trigger: GGGAAAGATCAAATGACATCATGTATGTGAAAATGC...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGGTCTGCCTTGTCATCTaGCATTTGGTTGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLVCLVI*HLVGFS
Trigger: ACTGAACCCAACCAAATGGCAGATGACAAGGCAGAC...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTGAAGATTCCCTACCATaGTGGTTATTATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: FITSILTSHQRLQPSTVTEDSLP*WLLSIC
Trigger: GCAAATGGATAATAACCAGCATGGTAGGGAATCTTC...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGGGCCACATGTACAATTaGATTTATATGAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGGHMYN*IYMKCP
Trigger: TGGACATTTCATATAAATGCAATTGTACATGTGGCC...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATTTCACAGATGCCACCTaGACTGCCTCTTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNFTDAT*TASFIR
Trigger: CCTGATGAAAGAGGCAGTCCAGGTGGCATCTGTGAA...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCCTGTACACCTTTATCTaGGCAAAGGGAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFLYTFI*AKGGRR
Trigger: TCTCCTTCCTCCCTTTGCCCAGATAAAGGTGTACAG...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCCCTACACGAGAGTTTTaGAGGCGACTCATGAAAATC +
Preference number: 4 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFPTREF*RRLMKI
Trigger: GATTTTCATGAGTCGCCTTCAAAACTCTCGTGTAGG...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCACCTCCAAGAGAATTaGAGTCACACGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKHLQEN*SHTMVE
Trigger: CTCCACCATCGTGTGACTGCAATTCTCTTGGAGGTG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGAGATGCCACCTGGACTaGCTCTTTCATCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKRCHLD*LFHQGR
Trigger: TCTTCCCTGATGAAAGAGGCAGTCCAGGTGGCATCT...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
3UTR CAA 72 bp GATGCTCCTATGGGCACAGTTCTAATAATGGCTGCATaGTTCCGAGAGAATTCCACAATTTCCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DAPMGTVLIMAA*FRENSTISICF
Trigger: AAAGCAGATGGAAATTGTGGAATTCTCTCGGAACAATGCAGCCATTATTAGAACTGTGCCCATAGGAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGCGGCCCACGATACAATaGCAGGTAGGGTTATATTTC +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKRPTIQ*QVGLYF
Trigger: GAAATATAACCCTACCTGGCATTGTATCGTGGGCCG...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAAAGTTCTAATAATGGCTaGATTGTTCCGAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: KSNLAWESDQVLHPNCCESSNNG*IVPREF
Trigger: GAATTCTCTCGGAACAATGCAGCCATTATTAGAACT...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCCCAGTTAAGCCTTTGTaGATCACAGTGCTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFPVKPL*ITVLSS
Trigger: AGAACTTAGCACTGTGATGCACAAAGGCTTAACTGG...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGCATATTATCTATGGCTaGTCTCACACTGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLHIIYG*SHTGMA
Trigger: TGCCATTCCAGTGTGAGAGCAGCCATAGATAATATG...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATACCTTAAATCTAGTCTaGAGGACACTAGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYTLNLV*RTLEFR
Trigger: CCTGAACTCTAGTGTCCTCCAGACTAGATTTAAGGT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGTCCACAATTTCCATCTaGTTTCCACAGTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKSTISI*FPQSLQ
Trigger: CTGAAGGGACTGTGGAAAGCAGATGGAAATTGTGGA...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CCA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATTACGTGGAATTAAACTaGGTAAGGATAACAGCGATG +
Preference number: 4 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYYVELN*VRITAM
Trigger: CATCGCTGTTATCCTTACCCAGTTTAATTCCACGTA...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR TCA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGTTTCCATCTTACAGATaGAGAAATCGAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKFPSYR*RNRGSE
Trigger: CTCAGATCCTCGATTTCTTCATCTGTAAGATGGAAA...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR GCA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATTTTGGTTTTGTTTACTaGGACATACACATGAAATCG +
Preference number: 4 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNFGFVY*DIHMKS
Trigger: CGATTTCATGTGTATGTCGCAGTAAACAAAACCAAA...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS CCA 90 bp ACACTTCACGGAGGCGAGTCCGCACTGGGCCCTGGGGAGGAGCGATaGCCCGAGGCAGAGCACAGGCAGGGGCGGTGTTCCCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TLHGGESALGPGEER*PEAEHRQGRCSLGS
Trigger: GGAGCCCAGGGAACACCGCCCCTGCCTGTGCTCTGCCTCGGGCCATCGCTCCTCCCCAGGGCCCAGTGCGGACTCGCCTCCGTGAAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGTGCCGCGGTCCGCCCTaGGAGTTTCGCCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGCRGPP*EFRRPP
Trigger: GGGCGGCCGGCGAAACTCCAAGGGCGGACCGCGGCA...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGAGCAACGCCGCCTGCTaGCCATCGCTGCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGSNAAC*PSLPPP
Trigger: TGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCT...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGCTTGCTCATCCTGGGTCTGCCTaGTCATCTGCCATTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SLQKRQGCPGAPGLSRLAHPGSA*SSAIWL
Trigger: CAACCAAATGGCAGATGACAAGGCAGACCCAGGATG...AGCAAGCCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp AGCCATTCTCTTCAGAAAAGGCAAGGCTGCCCTGGGGCACCAGGCCTGTCCAGGACACTCTCAGAAGTCTaGGCACTGCTGATTTCTCGA +
Preference number: 5 (lower is better)
Translates to: SHSLQKRQGCPGAPGLSRTLSEV*ALLISR
Trigger: TCGAGAAATCAGCAGTGCCAAGACTTCTGAGAGTGT...CCTGGACAGGCCTGGTGCCCCAGGGCAGCCTTGCCTTTTCTGAAGAGAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAACAAGGAGCAGGGATATaGATGCTCCTATGGGCACAG +
Preference number: 5 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKQGAGI*MLLWAQ
Trigger: CTGTGCCCATAGGAGCATCAATATCCCTGCTCCTTG...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAACCTACCCCTTTTTCCTaGACAATCCCAACACTGTCC +
Preference number: 5 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKPTPFS*TIPTLS
Trigger: GGACAGTGTTGGGATTGTCAAGGAAAAAGGGGTAGG...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTGACATGTCTGCGTTCTaGATCACTGCCTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCDMSAF*ITAFRS
Trigger: TGACCGGAAGGCAGTGATCAAGAACGCAGACATGTC...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCCCATTCGTCAACGGCATCCTGTaGCATGTCCTCAGACATGTC +
Preference number: 5 (lower is better)
Translates to: AATGQSVSSGWSSLQSPFVNGIL*HVLRHV
Trigger: GACATGTCTGAGGACATGCAACAGGATGCCGTTGAC...GAATGGGGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ACTGTGTGGCACCACTGCCACCATGCCAACCCCTCATCCCCAAAGAGACCCAAATGCCCACTGAAGGGTTaGATAAAGGGAACTCAGTCA +
Preference number: 5 (lower is better)
Translates to: TVWHHCHHANPSSPKRPKCPLKG*IKGTQS
Trigger: TGACTGAGTTCCCTTTATCAAACCCTTCAGTGGGCA...TTTGGGTCTCTTTGGGGATGAGGGGTTGGCATGGTGGCAGTGGTGCCACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTCTGTGCAGGAATGTGTaGTTCACAGATGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCLCRNV*FTDATW
Trigger: CCAGGTGGCATCTGTGAACAACACATTCCTGCACAG...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTTCAAGGTGGCAAGGCTaGGGCAGCAAGGAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: FITSILTSHQRLQPSTVTSRWQG*GSKESR
Trigger: ACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGA...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CACGCCTTTCAAGGTGGCAAGGCTTGGGCAGCAAGGAGAGCCGTGCCTAAGGCAGGTGGGCCTTTTATTTaGTATAGGGAAAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: HAFQGGKAWAARRAVPKAGGPFI*YRERKR
Trigger: TCTCTTTCTTTCCCTATACAAAATAAAAGGCCCACC...TGCCTTAGGCACGGCTCTCCTTGCTGCCCAAGCCTTGCCACCTTGAAAGGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGGGGAGAGGTGCTATCTaGCACAGGATGTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGGRGAI*HRMSES
Trigger: GCTTTCTGACATCCTGTGCAAGATAGCACCTCTCCC...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCTTTCCACAGTCCCTTCAGTGACACATGCTCACATACTTTCCCATCCTGGGCCAGCTACATGGGCTTaGCCACTCACCTTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LLSTVPSVTHAHILSHPGPATWA*PLTFSD
Trigger: ATCAGAGAAGGTGAGTGGCAAAGCCCATGTAGCTGG...CCCAGGATGGGAAAGTATGTGAGCATGTGTCACTGAAGGGACTGTGGAAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCACTCAGGCACTCTTGCTaGAATACACCTGGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSLRHSC*NTPGSD
Trigger: GTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAG...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TCCAGGAAGCCCTGCAGGATTAGTCTTCCAGATGAGCACTGTGCACCTACCTGTAACCCAGTTAAGCCTTaGTGCATCACAGTGCTAAGT +
Preference number: 5 (lower is better)
Translates to: SRKPCRISLPDEHCAPTCNPVKP*CITVLS
Trigger: ACTTAGCACTGTGATGCACAAAGGCTTAACTGGGTT...ACAGGTAGGTGCACAGTGCTCATCTGGAAGACTAATCCTGCAGGGCTTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CAAGAGTGGCTCAGGCACTCTTGCTTGAATACACCTGGGAGTGACCCTCTCACGGAGGAGGATTGCAACTaGACCCAAGTAAAAATAGAT +
Preference number: 5 (lower is better)
Translates to: QEWLRHSCLNTPGSDPLTEEDCN*TQVKID
Trigger: ATCTATTTTTACTTGGGTCAAGTTGCAATCCTCCTC...CGTGAGAGGGTCACTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCACTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TTTATCACTTCTATCCTCACCTCCCACCAGAGACTGCAACCATCCACAGTCACTTTTGCCTCCCTTAGATaGTCACCACCTTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: FITSILTSHQRLQPSTVTFASLR*SPPCPF
Trigger: GAAAGGGCAAGGTGGTGACAATCTAAGGGAGGCAAA...AGTGACTGTGGATGGTTGCAGTCTCTGGTGGGAGGTGAGGATAGAAGTGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp AAATCAAACCTGGCCTGGGAGTCAGATCAAGTTCTGCATCCCAATTGTTGCGAAGAGTATTCACGCACATaGATGTGGACACCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: KSNLAWESDQVLHPNCCEEYSRT*MWTPSP
Trigger: TGGGCTTGGTGTCCACATCAATGTGCGTGAATACTC...TTCGCAACAATTGGGATGCAGAACTTGATCTGACTCCCAGGCCAGGTTTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATGTGGCTCAGGCACTCTaGCTTGAATACACCTGGGAG +
Preference number: 5 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNVAQAL*LEYTWE
Trigger: CTCCCAGGTGTATTCAAGCAAGAGTGCCTGAGCCAC...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GCCCACTTAGAACTAACTGTGCCCCCTACCTACCCATACACCCTAGAGATTCCAACTACCACACTGTTTTaGCATGTTTGCATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: AHLELTVPPTYPYTLEIPTTTLF*HVCILS
Trigger: AGAGAGAATGCAAACATGCAAAAACAGTGTGGTAGT...TGGAATCTCTAGGGTGTATGGGTAGGTAGGGGGCACAGTTAGTTCTAAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TCCAGGTCTTCTGATTCTAGATCTTGTTCTGCCTACACTACCACACTGTTTTTGGAGTGGCCAGACCCTTaGCTAAATAGTCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SRSSDSRSCSAYTTTLFLEWPDP*LNSLQV
Trigger: AACCTGGAGACTATTTAGCAAAGGGTCTGGCCACTC...CAAAAACAGTGTGGTAGTGTAGGCAGAACAAGATCTAGAATCAGAAGACCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GGTACACCTGACCTCAACAGGCAACAGGTCATACTTGTTACTAGGGTAGTGAAGCTGGTTATTATCCATTaGCCTCCCTTAGATTGTCAC +
Preference number: 5 (lower is better)
Translates to: GTPDLNRQQVILVTRVVKLVIIH*PPLDCH
Trigger: GTGACAATCTAAGGGAGGCAAATGGATAATAACCAG...CTTCACTACCCTAGTAACAAGTATGACCTGTTGCCTGTTGAGGTCAGGTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGGTATCCTCGCTGTCCTaGCTAAACCAGAGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKVSSLS*LNQSPK
Trigger: CTTGGGGCTCTGGTTTAGCAAGGACAGCGAGGATAC...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ATAAGTGCTGCTACAGGCCAATCAGTATCTAGTGGCTGGTCTTCCCTTCAGTCCTGGGAGGGAGAATTTTaGCTTTTTGTGCCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: ISAATGQSVSSGWSSLQSWEGEF*LFVPLE
Trigger: TTCTAAAGGCACAAAAAGCAAAAATTCTCCCTCCCA...GGACTGAAGGGAAGACCAGCCACTAGATACTGATTGGCCTGTAGCAGCACTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GAGGATTCAGAGAATCACTTAGGTTCCACCAAAAGAGGTGCCATCTTTCTAAATACACCTCCAAGAGAATaGCAGTCACACGATGGTGGA +
Preference number: 5 (lower is better)
Translates to: EDSENHLGSTKRGAIFLNTPPRE*QSHDGG
Trigger: TCCACCATCGTGTGACTGCAATTCTCTTGGAGGTGT...ATTTAGAAAGATGGCACCTCTTTTGGTGGAACCTAAGTGATTCTCTGAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTGCCTCTTTCATCAGGGAAGAAAGTAGATGAGCTTTGGCCCTGGAGACACTCACACTATTGGAAAAAGTaGATCAGTGTGTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: LPLSSGKKVDELWPWRHSHYWKK*ISVCMS
Trigger: AGACATACACACACTGATCAACTTTTTCCAATAGTG...TGAGTGTCTCCAGGGCCAAAGCTCATCTACTTTCTTCCCTGATGAAAGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCCCCTACACGAGAGTTTaGAAGGCGACTCATGAAAAT +
Preference number: 5 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFPYTRV*KATHEN
Trigger: ATTTTCATGAGTCGCCTTCAAAACTCTCGTGTAGGG...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp ATGTATCAAACACTTCCTACAGGACAGGCACTGTTCTGTTTACTTGAAGATAAGGTATCCATGAGACCCTaGCTGCCAAACCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: MYQTLPTGQALFCLLEDKVSMRP*LPNPVK
Trigger: CTTAACTGGGTTTGGCAGCAAGGGTCTCATGGATAC...CTTATCTTCAAGTAAACAGAACAGTGCCTGTCCTGTAGGAAGTGTTTGATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp GACAGTGCCACAGCAACAAAGAAGATTCCCTACCATGCTGGTTATTATCCATTTCTAATAATGGCTGCATaGTTCCGAGAGAATTCCACA +
Preference number: 5 (lower is better)
Translates to: DSATATKKIPYHAGYYPFLIMAA*FRENST
Trigger: TGTGGAATTCTCTCGGAACAATGCAGCCATTATTAG...AAATGGATAATAACCAGCATGGTAGGGAATCTTCTTTGTTGCTGTGGCACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp CTTTCTTATGAACCTCTATATTGGCACAGTAGCAGTCTGTGGGTAGGAGTATTCGAAAGAGGTTTGGTTTaGTTTACTGCGACATACACA +
Preference number: 5 (lower is better)
Translates to: LSYEPLYWHSSSLWVGVFERGLV*FTATYT
Trigger: TGTGTATGTCGCAGTAAACAAAACCAAACCTCTTTC...GAATACTCCTACCCACAGACTGCTACTGTGCCAATATAGAGGTTCATAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS-3UTR CAA 90 bp TGCATCCCAATTGTTGCGAACATCCATGTGACCTTAGACAAGTTTCTTCCCTATAGGCCACATGTACAATaGCATTTATATGAAATGTCC +
Preference number: 5 (lower is better)
Translates to: CIPIVANIHVTLDKFLPYRPHVQ*HLYEMS
Trigger: GGACATTTCATATAAATGCAATTGTACATGTGGCCT...ATAGGGAAGAAACTTGTCTAAGGTCACATGGATGTTCGCAACAATTGGGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS CAA 90 bp CTGATGCTGGCTCCAGTGCAAAACAGTCCCAGCAACGCCGCCTGCTaGCCATCGCTGCCGCCGCCACTGACACCTTCACCATGGCCACCT +
Preference number: 6 (lower is better)
Translates to: LMLAPVQNSPSNAAC*PSLPPPLTPSPWPP
Trigger: AGGTGGCCATGGTGAAGGTGTCAGTGGCGGCGGCAGCGATGGCAAGCAGGCGGCGTTGCTGGGACTGTTTTGCACTGGAGCCAGCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579991.3
CDS TCA 72 bp CCACTGACACCTTCACCATGGCCACCTAGCCTGACTTaGAGAGGAGGATTGCAACTTGACCCAAGTAAAAAT +
Preference number: 6 (lower is better)
Translates to: PLTPSPWPPSLT*RGGLQLDPSKN
Trigger: ATTTTTACTTGGGTCAAGTTGCAATCCTCCTCTTCAAGTCAGGCTAGGTGGCCATGGTGAAGGTGTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579991.3