RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNC2I2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119333

Ensembl transcript IDs: ENST00000372715.7, ENST00000419989.2, ENST00000451652.5, ENST00000473486.1, ENST00000480613.6, ENST00000483181.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGGGAGGGCTGCGTGGGGTGGAAGGCCAGACACAGGACAGCGCTaGGGACCTCCACCACGGCCGACGGCTGCTGGGGACGCAGGTCTC +
Preference number: 1 (lower is better)
Translates to: RGRAAWGGRPDTGQR*GPPPRPTAAGDAGL
Trigger: GAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR GCA 90 bp GCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTaGTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGCACACACG +
Preference number: 1 (lower is better)
Translates to: ARHRTALGTSTTADG*WGRRSRRSRFQAHT
Trigger: CGTGTGTGCCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR CCA 90 bp AGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTGCTaGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGCACACACGAAG +
Preference number: 1 (lower is better)
Translates to: RHRTALGTSTTADGC*GRRSRRSRFQAHTK
Trigger: CTTCGTGTGTGCCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR CCA 90 bp TCACCACTGTACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCC +
Preference number: 1 (lower is better)
Translates to: SPLYSPPATWEGCVG*KARHRTALGTSTTA
Trigger: GGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAGTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR GCA 90 bp CCACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTaGGCCACAGCAGCGGGTCCTCAAGACGGCTCAGGTCCCACACCA +
Preference number: 1 (lower is better)
Translates to: PPGTQGLCGCHPSGL*ATAAGPQDGSGPTP
Trigger: TGGTGTGGGACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR-3UTR CCA 90 bp ACCACTGTACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTGGAAGGCCAGACGGCCGACGGCTGCTaGGGACGCAGGTCTCGCCGG +
Preference number: 2 (lower is better)
Translates to: TTVQPSCDVGGLRGVEGQTADGC*GRRSRR
Trigger: CCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGT...CTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR-3UTR GCA 90 bp TGTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCAAGACGGCTCAGGTACCACGGCCGACGGCTaGTGGGGACGCAGGTCTCGC +
Preference number: 2 (lower is better)
Translates to: CHPSGLCATAAGPQDGSGTTADG*WGRRSR
Trigger: GCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGT...ACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR-3UTR CCA 90 bp CACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACA +
Preference number: 2 (lower is better)
Translates to: HLGHRVCVGVIRQACAPQEGCVG*KARHRT
Trigger: TGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTC...CTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR-3UTR CCA 90 bp CAGAGTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: QSSTFPSVATLSTWKRWLDTGSV*VSSVRP
Trigger: AGGCCTGACGGATGACACCCACACAGACCCTGTGTC...CAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR GCA 72 bp AGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTaGTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: RTALGTSTTADG*WGRRSRRSRFQ
Trigger: CTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR CCA 72 bp GCTGCGTGGGGTGGAAGGCCAGACACAGGACAGCGCTaGGGACCTCCACCACGGCCGACGGCTGCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: AAWGGRPDTGQR*GPPPRPTAAGD
Trigger: GTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR CCA 72 bp TACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACAGCGCTGGGGACCTCC +
Preference number: 3 (lower is better)
Translates to: YSPPATWEGCVG*KARHRTALGTS
Trigger: GGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR CCA 72 bp TCGGGCAGCCACACCACCTGGGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: SGSHTTWDTGSV*VSSVRPVRHSS
Trigger: GCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGGTGTGGCTGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
3UTR GCA 72 bp ACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTaGGCCACAGCAGCGGGTCCTCAAGACGGCTCAGGT +
Preference number: 3 (lower is better)
Translates to: TQGLCGCHPSGL*ATAAGPQDGSG
Trigger: ACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR TCA 90 bp GGAGGGCTGCGTGGGGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACACGGGGGCTGCACGCTaGCAGGCACGGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GGLRGVEGQTQDSAGDLHTGAAR*QARGPP
Trigger: CGGAGGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGT...GTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp CCACCACGGCCGACGGCTGCTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGCGTGGGAGGGCTGCGTaGGGTGGAAGGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: PPRPTAAGDAGLAGPGSRRGRAA*GGRPDT
Trigger: TGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACG...CCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp GGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTAGCCCTCCTGCGACGTaGGAGGGCTGCGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRPDTGQRWGPPPRPTASPPAT*EGCVGW
Trigger: CCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCT...AGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp TGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTGCTGGACGGCCCTCCACTaGGAGGGCACGGACGCCACA +
Preference number: 4 (lower is better)
Translates to: WKARHRTALGTSTTADGCWTALH*EGTDAT
Trigger: TGTGGCGTCCGTGCCCTCGCAGTGGAGGGCCGTCCA...GCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CACCACGGCCGACGGCTGCTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGCCCTGGCCTGGGCGGATaGACTGGCAGTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: HHGRRLLGTQVSPVQVPGPGLGG*TGSGNA
Trigger: AGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGG...GCCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CCACCACGGCCGACGGCTGCTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGACTGTACAGCCCTCCTaGGACGTGGGAGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PPRPTAAGDAGLAGPGSRTVQPS*DVGGLR
Trigger: ACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAGT...CCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CTGTACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTGGAAGGCCAGACACTACTGGGACGGGGGCTaGACGCTGACAGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: LYSPPATWEGCVGWKARHYWDGG*TLTGTG
Trigger: CCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTA...GTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp ACCACTGTACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTGGAAGGCCAGGCGACGTGGGAGGGCTaGGTGGGGTGGAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TTVQPSCDVGGLRGVEGQATWEG*VGWKAR
Trigger: TCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGC...CTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GGACCTCCACCACGGCCGACGGCTGCTGGGGACGCAGGTCTCGCCGGTCCAGGTCCAGCCATCTGCTGCTaGTCGGTCCAGTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: GPPPRPTAAGDAGLAGPGPAICC*SVQFTS
Trigger: CGAGGTGAACTGGACCGAGCAGCAGCAGATGGCTGG...ACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGTGGAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp CTGTACAGCCCTCCTGCGACGTGGGAGGGCTGCGTGGGGTGGAAGGCCAGACACTCCCAGCGGATGCCCTaGACGGCCCTCCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LYSPPATWEGCVGWKARHSQRMP*TALHCE
Trigger: CTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGA...GTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp CCACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAACGGCCGACGGCTGCTaGGGACGCAGGTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: PPGTQGLCGCHPSGLCATTADGC*GRRSRR
Trigger: CCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGT...TGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGCGGCTGCGCGCGGGTTaGCATGGAGACGGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ACVRNTRLGTAKACTRLPRLRAG*HGDGSA
Trigger: GGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCG...CGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCAAGACGGCTCAGGTCCCACTCGTCTCCCAGCGGATaGCCTGGACGGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SVRPVRHSSGSSRRLRSHSSPSG*PGRPST
Trigger: AGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGA...GTGGGACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp TCGGGCAGCCACACCACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGACCACGGCCGACGGCTaGTGGGGACGCAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SGSHTTWDTGSVWVSSVRTTADG*WGRRSR
Trigger: GCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGT...CCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGGTGTGGCTGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGTGCCTGGAAGCGGTGGCTGTaGCCAGGCTCGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VAPSRRWPHSAPGSGGCAWKRWL*PGSGSH
Trigger: GTGGCTGCCCGAGCCTGGGCACAGCCACCGCTTCCA...GGCACAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACGGCCGCCACCTCTGCTaGCAGGCAGTCCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASETQGSAQRRLAPASRDGRHLC*QAVQVL
Trigger: GAGGACCTGGACTGCCTGGCAGCAGAGGTGGCGGCC...GTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGTGCCGACACAGGACAGCGCTaGGGACCTCCACCACGGCCG +
Preference number: 4 (lower is better)
Translates to: VAPSRRWPHSAPGSGGCADTGQR*GPPPRP
Trigger: CGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTC...GGCACAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp TGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTGCGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACA +
Preference number: 4 (lower is better)
Translates to: WKARHRTALGTSTTADGCEGCVG*KARHRT
Trigger: TGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTC...GCAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR TCA 90 bp TTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTACGGGGGCTGCACGCTaGCAGGCACGGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FGLRQKHKARHSEGLHPPTGAAR*QARGPP
Trigger: CGGAGGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGT...AGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACTCGTCTCCCAGCGGATaGCCTGGACGGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ASETQGSAQRRLAPASRDSSPSG*PGRPST
Trigger: AGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGA...GTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGGCGCGCGGGTTGCCATaGAGACGGTTCCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRQKHKARHSEGLHPPPGARGLP*RRFRPL
Trigger: GAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGC...CCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCAAGACGGCTCCTGGGCGGATGCACTaGCAGTGGCAATGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGVIRQACAPQQRVLKTAPGRMH*QWQCWP
Trigger: CGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGG...AGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp GGGCTGCGTGGGGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACCGTCCACATGATTCCTaGCCTGGGCGGATGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLRGVEGQTQDSAGDLHHRPHDS*PGRMHW
Trigger: CCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACG...GTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp GGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGACACAGGACAGCGCTaGGGACCTCCACCACGGCCG +
Preference number: 4 (lower is better)
Translates to: GLRQKHKARHSEGLHPPPDTGQR*GPPPRP
Trigger: CGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTC...GGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCCGTGGGAGGGCTGCGTaGGGTGGAAGGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: RQKHKARHSEGLHPPPGTRGRAA*GGRPDT
Trigger: TGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACG...GGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACACTGTACAGCCCTCCTaGGACGTGGGAGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ASETQGSAQRRLAPASRDTVQPS*DVGGLR
Trigger: ACGCAGCCCTCCCACGTCGCAGGAGGGCTGTACAGT...GTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCGCTGGAGAAGGCCACTaGCGTGGCGCCCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: WLASETQGSAQRRLAPASAGEGH*RGAHLG
Trigger: ACCGAGGTGGGCGCCACGGCAGTGGCCTTCTCCAGC...GGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCAAGACGGCTCAGGTCCGGATGCACTGGCAGTaGCAATGCTGGCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VIRQACAPQQRVLKTAQVRMHWQ*QCWPSG
Trigger: GCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCG...GACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp GGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCCCTGGGCGGATGCACTaGCAGTGGCAATGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLRQKHKARHSEGLHPPPPGRMH*QWQCWP
Trigger: CGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGG...GGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTGGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VEGQTQDSAGDLHHGRRLDTGSV*VSSVRP
Trigger: AGGCCTGACGGATGACACCCACACAGACCCTGTGTC...CAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGAGAAGGTAAACTGTaGTGGGGCCCGCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLRQKHKARHSEGLHPPPGEGKL*WGPQGH
Trigger: GTGCCCCTGCGGGCCCCAGCACAGTTTACCTTCTCC...GGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCAGCGCTTCCCGCCTaGCTGAGTGGCCCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGLRQKHKARHSEGLHPPALPA*LSGPGC
Trigger: GCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGG...CGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGCGGATGCACTGGCAGTaGCAATGCTGGCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LASETQGSAQRRLAPASRRMHWQ*QCWPSG
Trigger: GCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCG...CCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCACTGGGTATGTCATACTaGGACGGGGGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: GSVWVSSVRPVRHSSGSSLGMSY*DGGCTL
Trigger: CAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAG...TGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp CACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGGCACCTTCCCGTCGGTaGCCACACTCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: HLGHRVCVGVIRQACAPQAPSRR*PHSAPG
Trigger: TCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGC...CTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CAGAGTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGGGTCCAGCCATCTGCTaGTGCTCGGTCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: QSSTFPSVATLSTWKRWLGPAIC*CSVQFT
Trigger: GGTGAACTGGACCGAGCAGCAGCAGATGGCTGGACC...CAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGTGCCCATGGTCCAGCCATCTaGTGCTGCTCGGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VAPSRRWPHSAPGSGGCAHGPAI*CCSVQF
Trigger: GAACTGGACCGAGCAGCAGCAGATGGCTGGACCATG...GGCACAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp CCACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGTGCTCCAGTCCCCATaGTCCAGCCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPGTQGLCGCHPSGLCATVLQSP*SSHLLL
Trigger: CAGCAGCAGATGGCTGGACCATGGGGACTGGAGCAC...TGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR TCA 90 bp TCGGGCAGCCACACCACCTGGGACACAGGGTCTGTGTGGGTGTCATCCGTCAGGTGTTCAGCTCTCGGATaGCCATGGCCTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SGSHTTWDTGSVWVSSVRCSALG*PWPPLS
Trigger: GGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACA...CCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGGTGTGGCTGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp TGGGGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGTCTCCGAAGAAAGGCTaGGAGCCTGGGTATGTCATA +
Preference number: 4 (lower is better)
Translates to: WGGRPDTGQRWGPPPRPTSPKKG*EPGYVI
Trigger: TATGACATACCCAGGCTCGCAGCCTTTCTTCGGAGA...CGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CGGCCGACGGCTGCTGGGGACGCAGGTCTCGCCGGTCCAGGTTCCAGGCACACATCAAACGCGTGGCTCTaGCAATTCTTGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RPTAAGDAGLAGPGSRHTSNAWL*QFLFSS
Trigger: AGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGA...TGTGTGCCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp GCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCAAGACACCATCTGCTaGTGCTCGGTCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: ASETQGSAQRRLAPASRDQDTIC*CSVQFT
Trigger: GGTGAACTGGACCGAGCAGCAGCAGATGGTGTCTTG...GTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCCCGCAATGCTGGCCGTCTaGCAACTTTTCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SETQGSAQRRLAPASRDPAMLAV*QLFVSQ
Trigger: CTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGC...GGGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCCTGGCAGTGGCAATGCTaGCCGTCTGGCAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: VRNTRLGTAKACTRLPGPWQWQC*PSGNFS
Trigger: CGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCA...GGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GGGTCTGTGTGGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCATGGCAGTGGCAATGCTaGCCGTCTGGCAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: GSVWVSSVRPVRHSSGSSWQWQC*PSGNFS
Trigger: CGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCA...TGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp CAGAGTAGCACCTTCCCGTCGGTGGCCACACTCAGCACCTGGAAGCGGTGGCTGCACTGGCAGTGGCAATaGTGGCCGTCTGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: QSSTFPSVATLSTWKRWLHWQWQ*WPSGNF
Trigger: AAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTG...CAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR GCA 90 bp TCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCCCAGACAAGACACCATCTaGTGCTGCTCGGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SETQGSAQRRLAPASRDPRQDTI*CCSVQF
Trigger: GAACTGGACCGAGCAGCAGCAGATGGTGTCTTGTCT...GGGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGATACTTGAGGGAGAGCTaGAGCGAAGTCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CVRNTRLGTAKACTRLPGYLRES*SEVKGG
Trigger: CCCTCCCTTGACTTCGCTGCAGCTCTCCCTCAAGTA...TCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCCGACGGCTGAAGCCATCAAACGCGTaGCTCTGCCAATTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VEGQTQDSAGDLHHGRRLKPSNA*LCQFLF
Trigger: GAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTT...CAGCCGTCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp TTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCGAGGGGCCTGCAGCATaGAGTACAGGTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: LACVRNTRLGTAKACTRLEGPAA*STGGHA
Trigger: GGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTC...GAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCACCTTCACTGTGCCCTaGGCATCGCCCGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HLACVRNTRLGTAKACTRTFTVP*ASPAAK
Trigger: CTTGGCTGCGGGCGATGCCCAGGGCACAGTGAAGGT...GCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp CTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGAGTCTGCTGGCTGTTaGACTCCAGACAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LASETQGSAQRRLAPASRESAGC*TPDSRQ
Trigger: CTGTCTACTGTCTGGAGTTCAACAGCCAGCAGACTC...CCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGGTGCTCCGTGGCAGCTaGTGCATGACCAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SFGLRQKHKARHSEGLHPVLRGS*CMTRAK
Trigger: CTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCAC...CGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCGTCCACATGATTCCTaGCCTGGGCGGATGCACTGG +
Preference number: 4 (lower is better)
Translates to: FGLRQKHKARHSEGLHPPRPHDS*PGRMHW
Trigger: CCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACG...AGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CGGGTCCTCAAGACGGCTCAGGTCCCACACCAACACCTCACCACTGTACAGCCCGAAAGGCTGCGAGCCTaGGTATGTCATACTGGGACG +
Preference number: 4 (lower is better)
Translates to: RVLKTAQVPHQHLTTVQPERLRA*VCHTGT
Trigger: CGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTC...GGGCTGTACAGTGGTGAGGTGTTGGTGTGGGACCTGAGCCGTCTTGAGGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419989.2
CDS-3UTR CCA 90 bp TTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGACGGCCGACGGCTGCTaGGGACGCAGGTCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LLFFIWLASETQGSAQRRTADGC*GRRSRR
Trigger: CCGGCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGT...CCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp TTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCAGGGCGAAGCCCTCTGTaGGCTGCAGCTGGCCTACCC +
Preference number: 4 (lower is better)
Translates to: FFIWLASETQGSAQRRLAGRSPL*AAAGLP
Trigger: GGGTAGGCCAGCTGCAGCTCACAGAGGGCTTCGCCC...TGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCCTGAGTGGCCCCGGCTaGGCGCGGGTTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: PQSFAFLHLACVRNTRLGLSGPG*ARVAME
Trigger: CTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAG...GCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCATACTGGGACGGGGGCTaGACGCTGACAGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: FFIWLASETQGSAQRRLAYWDGG*TLTGTG
Trigger: CCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTA...TGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAACCACGGCCGACGGCTaGTGGGGACGCAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRTTADG*WGRRSR
Trigger: GCGAGACCTGCGTCCCCAGCAGCCGTCGGCCGTGGT...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCATCCGCGTGAGGGCTaGCTCTCCAGCTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSFGLRQKHKARHSEGLHHPREG*LSSCQG
Trigger: TCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATG...GTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGGCACAGCGAAGGCTTaGACCCGCCTCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: LFFIWLASETQGSAQRRLGTAKA*TRLPGP
Trigger: GGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCC...AAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCAAGCCATCAAACGCGTaGCTCTGCCAATTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RQKHKARHSEGLHPPPGTKPSNA*LCQFLF
Trigger: GAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTT...GGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACA +
Preference number: 4 (lower is better)
Translates to: LHLACVRNTRLGTAKACTEGCVG*KARHRT
Trigger: TGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTC...GGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp CTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTAGCTGGGCATCCGCGTaGGGGCTGCCTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFFIWLASETQGSAQRRLSWASA*GLPLQL
Trigger: CAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCT...AAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGTGGACGGCCCTCCACTaGGAGGGCACGGACGCCACA +
Preference number: 4 (lower is better)
Translates to: FSSFGLRQKHKARHSEGLWTALH*EGTDAT
Trigger: TGTGGCGTCCGTGCCCTCGCAGTGGAGGGCCGTCCA...CAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGGACACCATCTGCTGCTaGTCGGTCCAGTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: SFGLRQKHKARHSEGLHPDTICC*SVQFTS
Trigger: CGAGGTGAACTGGACCGAGCAGCAGCAGATGGTGTC...CGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCAAGCCCTCTGTGAGCTaGAGCTGGCCTACCCCGATG +
Preference number: 4 (lower is better)
Translates to: LHLACVRNTRLGTAKACTKPSVS*SWPTPM
Trigger: CATCGGGGTAGGCCAGCTGCAGCTCACAGAGGGCTT...GGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCAAGCCCTCCTGCGACGTaGGAGGGCTGCGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PKALLFFIWLASETQGSASPPAT*EGCVGW
Trigger: CCACCCCACGCAGCCCTCCCACGTCGCAGGAGGGCT...TGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGAGCTTGGTGCTCCGTaGCAGCTGCTGCATGACCAG +
Preference number: 4 (lower is better)
Translates to: FIWLASETQGSAQRRLAPELGAP*QLLHDQ
Trigger: CTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTC...GGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGTTCTGGGAGCTTTTCTaGAGATCAAACAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: LRQKHKARHSEGLHPPPGFWELF*RSNSCT
Trigger: CGTGCAGCTGTTTGATCTCCAGAAAAGCTCCCAGAA...CCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp AGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGCTGCCAGGGAACACTTaGGCGGGAAGCCGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SFAFLHLACVRNTRLGTALPGNT*AGSRLP
Trigger: CGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAG...CGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TCCCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCGACGTGGGAGGGCTaGGTGGGGTGGAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SPKALLFFIWLASETQGSATWEG*VGWKAR
Trigger: TCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGC...CGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCGGCTGCCTCTCCAGCTaGCAGGGAACACTTGAGCGG +
Preference number: 4 (lower is better)
Translates to: FLHLACVRNTRLGTAKACGCLSS*QGTLER
Trigger: CCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCC...GCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGACCTTTCATCCTGGGTTTaGTTGATCAAAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASETQGSAQRRLAPASRDLSSWV*LIKTVG
Trigger: ACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAG...GTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp AGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGGCCACACCTTCACTGTaGCCTGGGCATCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SFAFLHLACVRNTRLGTAATPSL*PGHRPQ
Trigger: CTGCGGGCGATGCCCAGGGCACAGTGAAGGTGTGGC...CGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAATCCCAGCGGATGCCCTaGACGGCCCTCCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LCFSSFGLRQKHKARHSESQRMP*TALHCE
Trigger: CTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGA...TTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTACCCTGCGCTTGGGCTaGCGGGTAGCCCAGGGTATA +
Preference number: 4 (lower is better)
Translates to: AFLHLACVRNTRLGTAKATLRLG*RVAQGI
Trigger: TATACCCTGGGCTACCCGCCAGCCCAAGCGCAGGGT...AGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCGCACCTTCCCGTCGGTaGCCACACTCAGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: CFSSFGLRQKHKARHSEGAPSRR*PHSAPG
Trigger: TCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGC...GCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp AAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCAGAAGGCCACTGCCGTaGCGCCCACCTCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KLCFSSFGLRQKHKARHSRRPLP*RPPRSP
Trigger: GGGAGACCGAGGTGGGCGCCACGGCAGTGGCCTTCT...GCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp AAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGTGGCAGCTGCTGCATaGCCAGGGCGAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLCFSSFGLRQKHKARHSVAAAA*PGRSPL
Trigger: CAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCAC...GCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp AAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGGGTTCCGCCCTCTCGTaGGGACGCACTCAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: KALLFFIWLASETQGSAQGSALS*GRTQAR
Trigger: TCGCGCCTGAGTGCGTCCGCACGAGAGGGCGGAACC...CTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGACCTGGCCTGGGCGGATaGACTGGCAGTGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRPGLGG*TGSGNA
Trigger: AGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGG...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp AAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGTGGAAGCGGTGGCTGTaGCCAGGCTCGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KALLFFIWLASETQGSAQWKRWL*PGSGSH
Trigger: GTGGCTGCCCGAGCCTGGGCACAGCCACCGCTTCCA...CTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCCCTACCCCGATGCCCTaGCAGAGTAGCACCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PQSFAFLHLACVRNTRLGPTPMP*QSSTFP
Trigger: CGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAGG...GCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp AGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGGCTGGCCTACCCCGATaGCCTGCCAGAGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: SFAFLHLACVRNTRLGTAAGLPR*PARVAP
Trigger: AGGTGCTACTCTGGCAGGGCATCGGGGTAGGCCAGC...CGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACTCAGGCCGCCACCTCTaGTGCCAGGCAGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PKLCFSSFGLRQKHKARHSGRHL*CQAVQV
Trigger: GACCTGGACTGCCTGGCAGCAGAGGTGGCGGCCTGA...GTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCTCTGTGAGCTGCAGCTaGCCTACCCCGATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PQSFAFLHLACVRNTRLGSVSCS*PTPMPC
Trigger: GCAGGGCATCGGGGTAGGCCAGCTGCAGCTCACAGA...GCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACACTCCGTGGCAGCTGCTaGATGACCAGGGCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QSFAFLHLACVRNTRLGTLRGSC*MTRAKP
Trigger: GGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAG...TGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCACCACAGAGCCAGTaGAGTTCCAGGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: FFIWLASETQGSAQRRLAPPQSQ*SSRRCW
Trigger: CCAGCATCTCCTGGAACTCCACTGGCTCTGTGGTGG...TGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACGAAGGTAAACTGTGCTaGGGCCCGCAGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: PKLCFSSFGLRQKHKARHEGKLC*GPQGHG
Trigger: TCCGTGCCCCTGCGGGCCCCAGCACAGTTTACCTTC...GTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp TTCCCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCCGCGGGGATGCTTCTTaGGCTTGGTGCTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FPQSFAFLHLACVRNTRLRGDAS*AWCSVA
Trigger: TGCCACGGAGCACCAAGCTCAAGAAGCATCCCCGCG...GAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp CCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACCCGCAGCCAAGAGCTaGGTCTGCTGGCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PKALLFFIWLASETQGSAPAAKS*VCWLLN
Trigger: GTTCAACAGCCAGCAGACTCAGCTCTTGGCTGCGGG...TGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCAGAGTACAGGTGGACATaGCCGTCAGTCCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: PKALLFFIWLASETQGSAEYRWT*PSVPAL
Trigger: GAGCGCTGGGACTGACGGGCATGTCCACCTGTACTC...TGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCAGTCAAGGGAGGGGCCTaGAGCATGGAGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKALLFFIWLASETQGSAVKGGA*SMEYRW
Trigger: CCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGAC...TGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRDTGSV*VSSVRP
Trigger: AGGCCTGACGGATGACACCCACACAGACCCTGTGTC...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCAGGAAGAGATTCCTGTaGAAGGGGGAACAGCTCACA +
Preference number: 4 (lower is better)
Translates to: FIWLASETQGSAQRRLAPRKRFL*KGEQLT
Trigger: TGTGAGCTGTTCCCCCTTCCACAGGAATCTCTTCCT...GGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp CCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACTGTTCAGCTCTCGGATaGCCATGGCCTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PKLCFSSFGLRQKHKARHCSALG*PWPPLS
Trigger: GGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACA...GTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACACTGGGTATGTCATACTaGGACGGGGGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: QSFAFLHLACVRNTRLGTLGMSY*DGGCTL
Trigger: CAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAG...TGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGTTCCAGGAGATGCTaGTCACATGCAGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRSSRRC*SHADPA
Trigger: CGCAGGGTCTGCATGTGACCAGCATCTCCTGGAACT...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGAGCATGGAGTACAGGTaGACATGCCCGTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSSFGLRQKHKARHSEGLSMEYR*TCPSVP
Trigger: TGGGACTGACGGGCATGTCCACCTGTACTCCATGCT...CAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAAACCAAGGGCCGCACTaGGGACCAGCGCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: QSFAFLHLACVRNTRLGTNQGPH*GPAHSK
Trigger: TTTGCTGTGCGCTGGTCCCCAGTGCGGCCCTTGGTT...TGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACCACTGGCAGTGGCAATaGTGGCCGTCTGGCAACTTT +
Preference number: 4 (lower is better)
Translates to: PKLCFSSFGLRQKHKARHHWQWQ*WPSGNF
Trigger: AAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTG...GTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAATTTCCCAGAGGCAGCTaGAAAAACCAAGGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LCFSSFGLRQKHKARHSEFPRGS*KNQGPH
Trigger: GTGCGGCCCTTGGTTTTTGCAGCTGCCTCTGGGAAA...TTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR TCA 90 bp AAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCCAGCAAACAGATACTTaGGGGAGAGCTGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: KLCFSSFGLRQKHKARHSQQTDT*GRAAAK
Trigger: CTTCGCTGCAGCTCTCCCTCAAGTATCTGTTTGCTG...GCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGATCTCCGAAGAAAGGCTaGGAGCCTGGGTATGTCATA +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRSPKKG*EPGYVI
Trigger: TATGACATACCCAGGCTCGCAGCCTTTCTTCGGAGA...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp CCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCTGGAGATCAAACAGCTaGACGTCACCTTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQSFAFLHLACVRNTRLGWRSNS*TSPFPE
Trigger: CTCTGGGAAAGGTGACGTGCAGCTGTTTGATCTCCA...GCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp TTCCCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGAAAGGCTGCGAGCCTaGGTATGTCATACTGGGACG +
Preference number: 4 (lower is better)
Translates to: FPQSFAFLHLACVRNTRLERLRA*VCHTGT
Trigger: CGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTC...GAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp AAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCTCAAACGCGTGGCTCTaGCAATTCTTGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLCFSSFGLRQKHKARHSSNAWL*QFLFSS
Trigger: AGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGA...GCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR GCA 90 bp TTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGTTTCTTCATTTGGCTTaGGTCAGAAACACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: FSSFGLRQKHKARHSEGLFLHLA*VRNTRL
Trigger: GAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAA...CAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CCCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCAAAACTGTGGGTTTCTaGGAGCTTTTCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: PQSFAFLHLACVRNTRLGKTVGF*ELFWRS
Trigger: TGATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTT...GCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAACAGGGCTTTCATCCTaGGTTTGCTTGATCAAAACT +
Preference number: 4 (lower is better)
Translates to: ALLFFIWLASETQGSAQRTGLSS*VCLIKT
Trigger: AGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGT...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CCA 90 bp CCCAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCATTGCTTTTCTTCATTTaGCTTGCGTCAGAAACACAA +
Preference number: 4 (lower is better)
Translates to: PKALLFFIWLASETQGSALLFFI*LASETQ
Trigger: TTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAA...TGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS TCA 90 bp CCCCGACTGTCGCCAGCGCCGCAACACCAGCGCTTCCCGCCTGGCTaGGTGGCCCCGGCTGCGCGCGGGTTGCCATGGAGACGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: PRLSPAPQHQRFPPG*VAPAARGLPWRRFR
Trigger: GCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGACAGTCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp CCCCGGCTGCGCGCGGGTTGCCATGGAGACGGTTCCGCCCTCTCGTaGGGACGCACTCAGGCGCGACCTCCGCCCCTACGCCGCCATGAG +
Preference number: 5 (lower is better)
Translates to: PRLRAGCHGDGSALS*GRTQARPPPLRRHE
Trigger: CTCATGGCGGCGTAGGGGCGGAGGTCGCGCCTGAGTGCGTCCGCACGAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp ACCAGCGCTTCCCGCCTGGCTGAGTGGCCCCGGCTGCGCGCGGGTTaGCATGGAGACGGTTCCGCCCTCTCGTGCGGACGCACTCAGGCG +
Preference number: 5 (lower is better)
Translates to: TSASRLAEWPRLRAG*HGDGSALSCGRTQA
Trigger: CGCCTGAGTGCGTCCGCACGAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp AGCGCCGCAACACCAGCGCTTCCCGCCTGGCTGAGTGGCCCCGGCTaGGCGCGGGTTGCCATGGAGACGGTTCCGCCCTCTCGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: SAATPALPAWLSGPG*ARVAMETVPPSRAD
Trigger: GTCCGCACGAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp GACTGTCGCCAGCGCCGCAACACCAGCGCTTCCCGCCTGGCTGAGTaGCCCCGGCTGCGCGCGGGTTGCCATGGAGACGGTTCCGCCCTC +
Preference number: 5 (lower is better)
Translates to: DCRQRRNTSASRLAE*PRLRAGCHGDGSAL
Trigger: GAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGACAGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp GCAACCCCGACTGTCGCCAGCGCCGCAACACCAGCGCTTCCCGCCTaGCTGAGTGGCCCCGGCTGCGCGCGGGTTGCCATGGAGACGGTT +
Preference number: 5 (lower is better)
Translates to: ATPTVASAATPALPA*LSGPGCARVAMETV
Trigger: AACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGACAGTCGGGGTTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp TGCTGGGGCCCGCAGGGGCACGGAGCTGGGCATCCGCGTGAGGGCTaGCTCTCCAGCTGCCAGGGAACACTTGAGCGGGAAGCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: CWGPQGHGAGHPREG*LSSCQGTLEREAAF
Trigger: GAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCTCCGTGCCCCTGCGGGCCCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 90 bp AGGCTTGCACCCGCCTCCCGGGACCCCTCAGGCCGCCACCTCTGCTaGCAGGCAGTCCAGGTCCTCAGCTTCCCGGGGCCCTTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: RLAPASRDPSGRHLC*QAVQVLSFPGPLFR
Trigger: ACGGAACAAGGGCCCCGGGAAGCTGAGGACCTGGACTGCCTGGCAGCAGAGGTGGCGGCCTGAGGGGTCCCGGGAGGCGGGTGCAAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp CCCCGCCCGGCAGCCCCTGCCCTGACCTGGGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGCGGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PRPAAPALTWDTGSV*VSSVRPVRHSSGSS
Trigger: TGAGGACCCGCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTCAGGGCAGGGGCTGCCGGGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473486.1
CDS GCA 90 bp GAGGAGGCGGACACAGCAGGCAGCTCACCTGCGACGTGGGAGGGCTaGGTGGGGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCC +
Preference number: 5 (lower is better)
Translates to: EEADTAGSSPATWEG*VGWKARHRTALGTS
Trigger: GGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGTGAGCTGCCTGCTGTGTCCGCCTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS CCA 90 bp GACACAGCAGGCAGCTCACCTGCGACGTGGGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: DTAGSSPATWEGCVG*KARHRTALGTSTTA
Trigger: GGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGTGAGCTGCCTGCTGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp TGGCAACTTTTCGTCTCCCAGCGGATGCCCTGGACGGCCCTCCACTaGGAGGGCACGGACGCCACACCCAGGGTCTCGTCCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: WQLFVSQRMPWTALH*EGTDATPRVSSCSG
Trigger: GCCGCTGCAGGACGAGACCCTGGGTGTGGCGTCCGTGCCCTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGAAAAGTTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 90 bp GCTGGCCTACCCCGATGCCCTGCCAGAGTAGCACCTTCCCGTCGGTaGCCACACTCAGCACCTGGAAGCGGTGGCTGTGCCCAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: AGLPRCPARVAPSRR*PHSAPGSGGCAQAR
Trigger: CCGAGCCTGGGCACAGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 90 bp AGGCGGACACAGCAGGCAGCTCACCTGCGACGTGGGAGGGCTGCGTaGGGTGGAAGGCCAGACACAGGACAGCGCTGGGGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: RRTQQAAHLRRGRAA*GGRPDTGQRWGPPP
Trigger: TGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGTGAGCTGCCTGCTGTGTCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS-3UTR CAA 90 bp TTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGCGGCACAGCGAAGGCTaGCACCCGCCTCCCGGGACC +
Preference number: 5 (lower is better)
Translates to: LRQKHKARHSEGLHPPPGRHSEG*HPPPGT
Trigger: GGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCG...CCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS TCA 90 bp TCCACCCCTCAGGGCTCACTGCAGACCTTCACCTGGGCTCCAGACTaGGAGGGTCAGGGCCCGCCTTCCTGTCTCCGGGCCAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: STPQGSLQTFTWAPD*EGQGPPSCLRAKGP
Trigger: GGGCCCTTTGGCCCGGAGACAGGAAGGCGGGCCCTGACCCTCTCAGTCTGGAGCCCAGGTGAAGGTCTGCAGTGAGCCCTGAGGGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp CAGGGGCACGGAGCTGGGCATCCGCGTGAGGGCTGCCTCTCCAGCTaGCAGGGAACACTTGAGCGGGAAGCCGCCTTCCGTGCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: QGHGAGHPREGCLSS*QGTLEREAAFRAQN
Trigger: ATTCTGGGCACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCTCCGTGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 90 bp TTTGCCGGACACCCCTGCCCTGCACCTGGCAGCTCCCTCCAGCGTTaGCTGCCCCCTACCACTGACGGCTTCCCAAGGGCACCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: FAGHPCPAPGSSLQR*LPPTTDGFPRAPAS
Trigger: AGAGGCAGGTGCCCTTGGGAAGCCGTCAGTGGTAGGGGGCAGGCAACGCTGGAGGGAGCTGCCAGGTGCAGGGCAGGGGTGTCCGGCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000483181.1
CDS GCA 90 bp CTCCGTGGCAGCTGCTGCATGACCAGGGCGAAGCCCTCTGTGAGCTaGAGCTGGCCTACCCCGATGCCCTGCCAGAGTAGCACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LRGSCCMTRAKPSVS*SWPTPMPCQSSTFP
Trigger: CGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAGGCCAGCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 90 bp GCCTCCACTCTCCGAAGAAAGGCTGCGAGCCTGGGTATGTCATACTaGGACGGGGGCTGCACGCTGACAGGCACGGGGGCCTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: ASTLRRKAASLGMSY*DGGCTLTGTGASVC
Trigger: GCAGACGGAGGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTCTTCGGAGAGTGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 90 bp GGCAGCTGCTGCATGACCAGGGCGAAGCCCTCTGTGAGCTGCAGCTaGCCTACCCCGATGCCCTGCCAGAGTAGCACCTTCCCGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GSCCMTRAKPSVSCS*PTPMPCQSSTFPSV
Trigger: CACCGACGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAGGCCAGCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 90 bp GAGAGGGTCAGGGCCCGCCTTCCTGTCTCCGGGCCAAAGGGCCCATaGAAAGCTCCCTTGTGCCCTCTGCAGGGCGGGAAGCTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: ERVRARLPVSGPKGP*KAPLCPLQGGKLSP
Trigger: AGGACTCAGCTTCCCGCCCTGCAGAGGGCACAAGGGAGCTTTCCATGGGCCCTTTGGCCCGGAGACAGGAAGGCGGGCCCTGACCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp GTCTCCCCGCGGGGATGCTTCTTGAGCTTGGTGCTCCGTGGCAGCTaGTGCATGACCAGGGCGAAGCCCTCTGTGAGCTGCAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSPRGCFLSLVLRGS*CMTRAKPSVSCSWP
Trigger: AGGCCAGCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTCAAGAAGCATCCCCGCGGGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 90 bp CATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTaGACCCGCCTCCCGGGACCCCTCAGGCCGCCACCTCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: HLACVRNTRLGTAKA*TRLPGPLRPPPLLP
Trigger: TGGCAGCAGAGGTGGCGGCCTGAGGGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp CTCATGCTGCGGGAGCTCCGAGAATGCAGGAGGCAGCTGTCCAACTaGCAACGCCCGGGTGACCTTCCTAGGAGAGTGGGCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LMLRELRECRRQLSN*QRPGDLPRRVGALS
Trigger: GGAGAGGGCGCCCACTCTCCTAGGAAGGTCACCCGGGCGTTGGCAGTTGGACAGCTGCCTCCTGCATTCTCGGAGCTCCCGCAGCATGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473486.1
CDS CCA 90 bp CGTAGGCACAGGCCACCACAGAGCCAGTGGAGTTCCAGGAGATGCTaGTCACATGCAGACCCTGCGCTTGGGCTGGCGGGTAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: RRHRPPQSQWSSRRC*SHADPALGLAGSPG
Trigger: CCCTGGGCTACCCGCCAGCCCAAGCGCAGGGTCTGCATGTGACCAGCATCTCCTGGAACTCCACTGGCTCTGTGGTGGCCTGTGCCTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372715.7
ENST00000451652.5
ENST00000473486.1
CDS-3UTR CAA 90 bp ATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCCCGGCTGCGCGCGGGTaGCCATGGAGACGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: IWLASETQGSAQRRLAPAPAARG*PWRRFR
Trigger: GCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGG...GGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp TGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCATGCAGACCCTGCGCTaGGGCTGGCGGGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: WLASETQGSAQRRLAPASMQTLR*GWRVAQ
Trigger: CTGGGCTACCCGCCAGCCCAAGCGCAGGGTCTGCAT...GGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp GGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGCTGCCAGGGAACACTaGAGCGGGAAGCCGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GLRQKHKARHSEGLHPPPAAREH*SGKPPS
Trigger: GGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGC...GGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp CGTGCCCAGAATGAACAGCCTAGGGTCAAAGCTGGAGAAGGCCACTaGCGTGGCGCCCACCTCGGTCTCCCCGCGGGGATGCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: RAQNEQPRVKAGEGH*RGAHLGLPAGMLLE
Trigger: CTCAAGAAGCATCCCCGCGGGGAGACCGAGGTGGGCGCCACGGCAGTGGCCTTCTCCAGCTTTGACCCTAGGCTGTTCATTCTGGGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 90 bp TCCTCAGCTTCCCGGGGCCCTTGTTCCGTGAACTCTGTGCTCAGCTaGCACACCTTCACTGTGCCCTGGGCATCGCCCGCAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SSASRGPCSVNSVLS*HTFTVPWASPAAKS
Trigger: GCTCTTGGCTGCGGGCGATGCCCAGGGCACAGTGAAGGTGTGGCAGCTGAGCACAGAGTTCACGGAACAAGGGCCCCGGGAAGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp CCTGGGCGTCCACATGATTCCTGGCCTGGGCGGATGCACTGGCAGTaGCAATGCTGGCCGTCTGGCAACTTTTCGTCTCCCAGCGGATGC +
Preference number: 5 (lower is better)
Translates to: PGRPHDSWPGRMHWQ*QCWPSGNFSSPSGC
Trigger: GCATCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS-3UTR CAA 90 bp TGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTGCACCCGCCTCCCGGGAGGATGCTTCTTGAGCTaGGTGCTCCGTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CVRNTRLGTAKACTRLPGGCFLS*VLRGSC
Trigger: GCAGCTGCCACGGAGCACCAAGCTCAAGAAGCATCC...TCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp CGTCCACATGATTCCTGGCCTGGGCGGATGCACTGGCAGTGGCAATaGTGGCCGTCTGGCAACTTTTCGTCTCCCAGCGGATGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RPHDSWPGRMHWQWQ*WPSGNFSSPSGCPG
Trigger: TCCAGGGCATCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 90 bp TCTGCACCTGGGCGTCCACATGATTCCTGGCCTGGGCGGATGCACTaGCAGTGGCAATGCTGGCCGTCTGGCAACTTTTCGTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SAPGRPHDSWPGRMH*QWQCWPSGNFSSPS
Trigger: GCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACGCCCAGGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp GTTCAGCTCTCGGATGACCATGGCCTCCACTCTCCGAAGAAAGGCTaGGAGCCTGGGTATGTCATACTGGGACGGGGGCTGCACGCTGAC +
Preference number: 5 (lower is better)
Translates to: VQLSDDHGLHSPKKG*EPGYVILGRGLHAD
Trigger: GTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTCTTCGGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp AGCGAAGTCAAGGGAGGGGCCTGCAGCATGGAGTACAGGTGGACATaGCCGTCAGTCCCAGCGCTCAGGAAGAGATTCCTGTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SEVKGGACSMEYRWT*PSVPALRKRFLWKG
Trigger: CCCCTTCCACAGGAATCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp AGCTGCAGCGAAGTCAAGGGAGGGGCCTGCAGCATGGAGTACAGGTaGACATGCCCGTCAGTCCCAGCGCTCAGGAAGAGATTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SCSEVKGGACSMEYR*TCPSVPALRKRFLW
Trigger: CCACAGGAATCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTCGCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 90 bp AACAGATACTTGAGGGAGAGCTGCAGCGAAGTCAAGGGAGGGGCCTaGAGCATGGAGTACAGGTGGACATGCCCGTCAGTCCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: NRYLRESCSEVKGGA*SMEYRWTCPSVPAL
Trigger: GAGCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTCGCTGCAGCTCTCCCTCAAGTATCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS TCA 90 bp AGCCATCAAACGCGTGGCTCTGCCAATTCTTGTTCAGCTCTCGGATaGCCATGGCCTCCACTCTCCGAAGAAAGGCTGCGAGCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: SHQTRGSANSCSALG*PWPPLSEERLRAWV
Trigger: TACCCAGGCTCGCAGCCTTTCTTCGGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 90 bp TGCTGCTCGGTCCAGTTCACCTCGAAGCCATCAAACGCGTGGCTCTaGCAATTCTTGTTCAGCTCTCGGATGACCATGGCCTCCACTCTC +
Preference number: 5 (lower is better)
Translates to: CCSVQFTSKPSNAWL*QFLFSSRMTMASTL
Trigger: GAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTTCGAGGTGAACTGGACCGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 90 bp ATCTGCTGCTGCTCGGTCCAGTTCACCTCGAAGCCATCAAACGCGTaGCTCTGCCAATTCTTGTTCAGCTCTCGGATGACCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ICCCSVQFTSKPSNA*LCQFLFSSRMTMAS
Trigger: GGAGGCCATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTTCGAGGTGAACTGGACCGAGCAGCAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS-3UTR CAA 90 bp TTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGCCGCGGGGATGCTTCTaGAGCTTGGTGCTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: FAFLHLACVRNTRLGTAKPRGCF*SLVLRG
Trigger: GCCACGGAGCACCAAGCTCAAGAAGCATCCCCGCGG...CTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp AAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCAGCTTCCCGGGGCCCTaGTTCCGTGAACTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: KLCFSSFGLRQKHKARHSSFPGP*FRELCA
Trigger: AGCACAGAGTTCACGGAACAAGGGCCCCGGGAAGCT...GCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp GCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAACAGCAAACAGATACTaGAGGGAGAGCTGCAGCGAA +
Preference number: 5 (lower is better)
Translates to: ALLFFIWLASETQGSAQRTANRY*RESCSE
Trigger: TTCGCTGCAGCTCTCCCTCAAGTATCTGTTTGCTGT...TCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 90 bp ACAGGGCTTTCATCCTGGGTTTGCTTGATCAAAACTGTGGGTTTCTaGGAGCTTTTCTGGAGATCAAACAGCTGCACGTCACCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: TGLSSWVCLIKTVGF*ELFWRSNSCTSPFP
Trigger: TGGGAAAGGTGACGTGCAGCTGTTTGATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp TGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTTTTCTTCATTTGGCTaGCGTCAGAAACACAAGGCT +
Preference number: 5 (lower is better)
Translates to: CFSSFGLRQKHKARHSEGFSSFG*RQKHKA
Trigger: AGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAA...GCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp TTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGTCATCCTGGGTTTGCTaGATCAAAACTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FAFLHLACVRNTRLGTAKSSWVC*IKTVGF
Trigger: GAAACCCACAGTTTTGATCAAGCAAACCCAGGATGA...CTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS-3UTR CAA 90 bp CAAAGCTTTGCTTTTCTTCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCTTTCATCCTGGGTTaGCTTGATCAAAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: QSFAFLHLACVRNTRLGTAFILG*LDQNCG
Trigger: CCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGC...TGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGAAGAAAAGCAAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp TCCCGCCTGGCTGAGTGGCCCCGGCTGCGCGCGGGTTaGCATGGAGACGGTTCCGCCCTCTCGTGCGGACGC +
Preference number: 6 (lower is better)
Translates to: SRLAEWPRLRAG*HGDGSALSCGR
Trigger: GCGTCCGCACGAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS TCA 72 bp TCGCCAGCGCCGCAACACCAGCGCTTCCCGCCTGGCTaGGTGGCCCCGGCTGCGCGCGGGTTGCCATGGAGA +
Preference number: 6 (lower is better)
Translates to: SPAPQHQRFPPG*VAPAARGLPWR
Trigger: TCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp CGCGCGGGTTGCCATGGAGACGGTTCCGCCCTCTCGTaGGGACGCACTCAGGCGCGACCTCCGCCCCTACGC +
Preference number: 6 (lower is better)
Translates to: RAGCHGDGSALS*GRTQARPPPLR
Trigger: GCGTAGGGGCGGAGGTCGCGCCTGAGTGCGTCCGCACGAGAGGGCGGAACCGTCTCCATGGCAACCCGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 72 bp CAGCGCCGCAACACCAGCGCTTCCCGCCTGGCTGAGTaGCCCCGGCTGCGCGCGGGTTGCCATGGAGACGGT +
Preference number: 6 (lower is better)
Translates to: QRRNTSASRLAE*PRLRAGCHGDG
Trigger: ACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 72 bp ACTGTCGCCAGCGCCGCAACACCAGCGCTTCCCGCCTaGCTGAGTGGCCCCGGCTGCGCGCGGGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: TVASAATPALPA*LSGPGCARVAM
Trigger: CATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGACAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp ACACCAGCGCTTCCCGCCTGGCTGAGTGGCCCCGGCTaGGCGCGGGTTGCCATGGAGACGGTTCCGCCCTCT +
Preference number: 6 (lower is better)
Translates to: TPALPAWLSGPG*ARVAMETVPPS
Trigger: AGAGGGCGGAACCGTCTCCATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp TTCGTCTCCCAGCGGATGCCCTGGACGGCCCTCCACTaGGAGGGCACGGACGCCACACCCAGGGTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: FVSQRMPWTALH*EGTDATPRVSS
Trigger: GGACGAGACCCTGGGTGTGGCGTCCGTGCCCTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp GGCAGCTCACCTGCGACGTGGGAGGGCTGCGTGGGGTaGAAGGCCAGACACAGGACAGCGCTGGGGACCTCC +
Preference number: 6 (lower is better)
Translates to: GSSPATWEGCVG*KARHRTALGTS
Trigger: GGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGTGAGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS TCA 72 bp GCCTGGGTATGTCATACTGGGACGGGGGCTGCACGCTaGCAGGCACGGGGGCCTCCGTCTGCACCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: AWVCHTGTGAAR*QARGPPSAPGR
Trigger: ACGCCCAGGTGCAGACGGAGGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp GCTGCGAGCCTGGGTATGTCATACTGGGACGGGGGCTaGACGCTGACAGGCACGGGGGCCTCCGTCTGCACC +
Preference number: 6 (lower is better)
Translates to: AASLGMSYWDGG*TLTGTGASVCT
Trigger: GGTGCAGACGGAGGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGCTCGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp GAGGAGGCGGACACAGCAGGCAGCTCACCTGCGACGTaGGAGGGCTGCGTGGGGTGGAAGGCCAGACACAGG +
Preference number: 6 (lower is better)
Translates to: EEADTAGSSPAT*EGCVGWKARHR
Trigger: CCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCGCAGGTGAGCTGCCTGCTGTGTCCGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS TCA 72 bp CAGGGCTCACTGCAGACCTTCACCTGGGCTCCAGACTaGGAGGGTCAGGGCCCGCCTTCCTGTCTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: QGSLQTFTWAPD*EGQGPPSCLRA
Trigger: GGCCCGGAGACAGGAAGGCGGGCCCTGACCCTCTCAGTCTGGAGCCCAGGTGAAGGTCTGCAGTGAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp TGCTGGCCGTCTGGCAACTTTTCGTCTCCCAGCGGATaGCCTGGACGGCCCTCCACTGCGAGGGCACGGACG +
Preference number: 6 (lower is better)
Translates to: CWPSGNFSSPSG*PGRPSTARART
Trigger: CGTCCGTGCCCTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp GGAGCTGGGCATCCGCGTGAGGGCTGCCTCTCCAGCTaGCAGGGAACACTTGAGCGGGAAGCCGCCTTCCGT +
Preference number: 6 (lower is better)
Translates to: GAGHPREGCLSS*QGTLEREAAFR
Trigger: ACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGATGCCCAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 72 bp GCCGTCTGGCAACTTTTCGTCTCCCAGCGGATGCCCTaGACGGCCCTCCACTGCGAGGGCACGGACGCCACA +
Preference number: 6 (lower is better)
Translates to: AVWQLFVSQRMP*TALHCEGTDAT
Trigger: TGTGGCGTCCGTGCCCTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGAAAAGTTGCCAGACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp AGGGCCCGCCTTCCTGTCTCCGGGCCAAAGGGCCCATaGAAAGCTCCCTTGTGCCCTCTGCAGGGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: RARLPVSGPKGP*KAPLCPLQGGK
Trigger: CTTCCCGCCCTGCAGAGGGCACAAGGGAGCTTTCCATGGGCCCTTTGGCCCGGAGACAGGAAGGCGGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp GCAGCCCCTGCCCTGACCTGGGACACAGGGTCTGTGTaGGTGTCATCCGTCAGGCCTGTGCGCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: AAPALTWDTGSV*VSSVRPVRHSS
Trigger: GCTGCTGTGGCGCACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTCAGGGCAGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473486.1
CDS GCA 72 bp CCCTCTGTGAGCTGCAGCTGGCCTACCCCGATGCCCTaGCAGAGTAGCACCTTCCCGTCGGTGGCCACACTC +
Preference number: 6 (lower is better)
Translates to: PSVSCSWPTPMP*QSSTFPSVATL
Trigger: GAGTGTGGCCACCGACGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAGGCCAGCTGCAGCTCACAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 72 bp CTCCGAAGAAAGGCTGCGAGCCTGGGTATGTCATACTaGGACGGGGGCTGCACGCTGACAGGCACGGGGGCC +
Preference number: 6 (lower is better)
Translates to: LRRKAASLGMSY*DGGCTLTGTGA
Trigger: GGCCCCCGTGCCTGTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTCTTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CAA 90 bp TCATTTGGCTTGCGTCAGAAACACAAGGCTCGGCACAGCGAAGGCTaGCACCCGCCTCCCGGGACCCCTCAGGCCGCCACCTCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SFGLRQKHKARHSEG*HPPPGTPQAATSAA
Trigger: GGCAGCAGAGGTGGCGGCCTGAGGGGTCCCGGGAGGCGGGTGCAAGCCTTCGCTGTGCCGAGCCTTGTGTTTCTGACGCAAGCCAAATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CAA 90 bp GCCCGCCTTCCTGTCTCCGGGCCAAAGGGCCCATGGAAAGCTCCCTaGTGCCCTCTGCAGGGCGGGAAGCTGAGTCCTGAGAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: ARLPVSGPKGPWKAP*CPLQGGKLSPERRG
Trigger: TCCTCTCCTCTCAGGACTCAGCTTCCCGCCCTGCAGAGGGCACAAGGGAGCTTTCCATGGGCCCTTTGGCCCGGAGACAGGAAGGCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp AGCTGCTGCATGACCAGGGCGAAGCCCTCTGTGAGCTaGAGCTGGCCTACCCCGATGCCCTGCCAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: SCCMTRAKPSVS*SWPTPMPCQSS
Trigger: GCTACTCTGGCAGGGCATCGGGGTAGGCCAGCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 72 bp AATGAACAGCCTAGGGTCAAAGCTGGAGAAGGCCACTaGCGTGGCGCCCACCTCGGTCTCCCCGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: NEQPRVKAGEGH*RGAHLGLPAGM
Trigger: CATCCCCGCGGGGAGACCGAGGTGGGCGCCACGGCAGTGGCCTTCTCCAGCTTTGACCCTAGGCTGTTCATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 72 bp TCCCGGGGCCCTTGTTCCGTGAACTCTGTGCTCAGCTaGCACACCTTCACTGTGCCCTGGGCATCGCCCGCA +
Preference number: 6 (lower is better)
Translates to: SRGPCSVNSVLS*HTFTVPWASPA
Trigger: TGCGGGCGATGCCCAGGGCACAGTGAAGGTGTGGCAGCTGAGCACAGAGTTCACGGAACAAGGGCCCCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp CGGGAGCTCCGAGAATGCAGGAGGCAGCTGTCCAACTaGCAACGCCCGGGTGACCTTCCTAGGAGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RELRECRRQLSN*QRPGDLPRRVG
Trigger: GCCCACTCTCCTAGGAAGGTCACCCGGGCGTTGGCAGTTGGACAGCTGCCTCCTGCATTCTCGGAGCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473486.1
CDS GCA 72 bp TTCCCAGGGCCCTCTCCAGTCCCAGAATCCCAGCGCTaGTCACTCGGTGCCTGCAGAGGAGGCTGGGAATGG +
Preference number: 6 (lower is better)
Translates to: FPGPSPVPESQR*SLGACRGGWEW
Trigger: CCATTCCCAGCCTCCTCTGCAGGCACCGAGTGAGCAGCGCTGGGATTCTGGGACTGGAGAGGGCCCTGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473486.1
CDS CCA 72 bp CTCCCCGCGGGGATGCTTCTTGAGCTTGGTGCTCCGTaGCAGCTGCTGCATGACCAGGGCGAAGCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LPAGMLLELGAP*QLLHDQGEALC
Trigger: ACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTCAAGAAGCATCCCCGCGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS GCA 72 bp CGGGGATGCTTCTTGAGCTTGGTGCTCCGTGGCAGCTaGTGCATGACCAGGGCGAAGCCCTCTGTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RGCFLSLVLRGS*CMTRAKPSVSC
Trigger: GCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTCAAGAAGCATCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 72 bp TCCTGGCCTGGGCGGATGCACTGGCAGTGGCAATGCTaGCCGTCTGGCAACTTTTCGTCTCCCAGCGGATGC +
Preference number: 6 (lower is better)
Translates to: SWPGRMHWQWQC*PSGNFSSPSGC
Trigger: GCATCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp AGAGCTGCAGCGAAGTCAAGGGAGGGGCCTGCAGCATaGAGTACAGGTGGACATGCCCGTCAGTCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RAAAKSREGPAA*STGGHARQSQR
Trigger: GCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTCGCTGCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CAA 72 bp GGCCGCACTGGGGACCAGCGCACAGCAAACAGATACTaGAGGGAGAGCTGCAGCGAAGTCAAGGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: GRTGDQRTANRY*RESCSEVKGGA
Trigger: GGCCCCTCCCTTGACTTCGCTGCAGCTCTCCCTCAAGTATCTGTTTGCTGTGCGCTGGTCCCCAGTGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp GATTCCTGGCCTGGGCGGATGCACTGGCAGTGGCAATaGTGGCCGTCTGGCAACTTTTCGTCTCCCAGCGGA +
Preference number: 6 (lower is better)
Translates to: DSWPGRMHWQWQ*WPSGNFSSPSG
Trigger: TCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp GGATGCTTCTTGAGCTTGGTGCTCCGTGGCAGCTGCTaGATGACCAGGGCGAAGCCCTCTGTGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GCFLSLVLRGSC*MTRAKPSVSCS
Trigger: GCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTCAAGAAGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372715.7
ENST00000483181.1
CDS CCA 72 bp GGGCGTCCACATGATTCCTGGCCTGGGCGGATGCACTaGCAGTGGCAATGCTGGCCGTCTGGCAACTTTTCG +
Preference number: 6 (lower is better)
Translates to: GRPHDSWPGRMH*QWQCWPSGNFS
Trigger: CGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS GCA 72 bp AAGGGAGGGGCCTGCAGCATGGAGTACAGGTGGACATaGCCGTCAGTCCCAGCGCTCAGGAAGAGATTCCTG +
Preference number: 6 (lower is better)
Translates to: KGGACSMEYRWT*PSVPALRKRFL
Trigger: CAGGAATCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS GCA 72 bp TTGAGGGAGAGCTGCAGCGAAGTCAAGGGAGGGGCCTaGAGCATGGAGTACAGGTGGACATGCCCGTCAGTC +
Preference number: 6 (lower is better)
Translates to: LRESCSEVKGGA*SMEYRWTCPSV
Trigger: GACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTCGCTGCAGCTCTCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 72 bp CCACATGATTCCTGGCCTGGGCGGATGCACTGGCAGTaGCAATGCTGGCCGTCTGGCAACTTTTCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: PHDSWPGRMHWQ*QCWPSGNFSSP
Trigger: GGGAGACGAAAAGTTGCCAGACGGCCAGCATTGCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp GAAGTCAAGGGAGGGGCCTGCAGCATGGAGTACAGGTaGACATGCCCGTCAGTCCCAGCGCTCAGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: EVKGGACSMEYR*TCPSVPALRKR
Trigger: TCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTACTCCATGCTGCAGGCCCCTCCCTTGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS TCA 72 bp ACGCGTGGCTCTGCCAATTCTTGTTCAGCTCTCGGATaGCCATGGCCTCCACTCTCCGAAGAAAGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: TRGSANSCSALG*PWPPLSEERLR
Trigger: TCGCAGCCTTTCTTCGGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CCA 72 bp TGCTCGGTCCAGTTCACCTCGAAGCCATCAAACGCGTaGCTCTGCCAATTCTTGTTCAGCTCTCGGATGACC +
Preference number: 6 (lower is better)
Translates to: CSVQFTSKPSNA*LCQFLFSSRMT
Trigger: GGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTTCGAGGTGAACTGGACCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CAA 90 bp GTCCAGTTCACCTCGAAGCCATCAAACGCGTGGCTCTGCCAATTCTaGTTCAGCTCTCGGATGACCATGGCCTCCACTCTCCGAAGAAAG +
Preference number: 6 (lower is better)
Translates to: VQFTSKPSNAWLCQF*FSSRMTMASTLRRK
Trigger: CTTTCTTCGGAGAGTGGAGGCCATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTTCGAGGTGAACTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372715.7
ENST00000419989.2
ENST00000451652.5
ENST00000480613.6
CDS CAA 90 bp CTGGCTGTTGAACTCCAGACAGTAGACAGGGCTTTCATCCTGGGTTaGCTTGATCAAAACTGTGGGTTTCTGGGAGCTTTTCTGGAGATC +
Preference number: 6 (lower is better)
Translates to: LAVELQTVDRAFILG*LDQNCGFLGAFLEI
Trigger: GATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGTCTACTGTCTGGAGTTCAACAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 72 bp TGCTTGATCAAAACTGTGGGTTTCTGGGAGCTTTTCTaGAGATCAAACAGCTGCACGTCACCTTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: CLIKTVGFWELF*RSNSCTSPFPE
Trigger: CTCTGGGAAAGGTGACGTGCAGCTGTTTGATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CCA 72 bp TCATCCTGGGTTTGCTTGATCAAAACTGTGGGTTTCTaGGAGCTTTTCTGGAGATCAAACAGCTGCACGTCA +
Preference number: 6 (lower is better)
Translates to: SSWVCLIKTVGF*ELFWRSNSCTS
Trigger: TGACGTGCAGCTGTTTGATCTCCAGAAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372715.7
CDS CAA 72 bp GAACTCCAGACAGTAGACAGGGCTTTCATCCTGGGTTaGCTTGATCAAAACTGTGGGTTTCTGGGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: ELQTVDRAFILG*LDQNCGFLGAF
Trigger: AAAAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGTCTACTGTCTGGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372715.7