RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000120875

Ensembl transcript IDs: ENST00000240100.7, ENST00000240101.2

Found 420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCCACGTGCCGACGATAGATTCAAAATGGCGCCTGCGTGCCCATaGCGCACGTCACGGGAGCCAGCGGCCAGCCCCCTCACCAGCAGT +
Preference number: 1 (lower is better)
Translates to: HPRADDRFKMAPACP*RTSREPAASPLTSS
Trigger: ACTGCTGGTGAGGGGGCTGGCCGCTGGCTCCCGTGACGTGCGTCATGGGCACGCAGGCGCCATTTTGAATCTATCGTCGGCACGTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp CCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAGCTaGTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTT +
Preference number: 1 (lower is better)
Translates to: PRRNDGEGARSPAPS*SVPTFCPHAARPTL
Trigger: AAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 90 bp CTAAGGATTCAAAATGGCACCCACGTGCCGACGATAGATTCAAAATaGCGCCTGCGTGCCCATGACGCACGTCACGGGAGCCAGCGGCCA +
Preference number: 1 (lower is better)
Translates to: LRIQNGTHVPTIDSK*RLRAHDARHGSQRP
Trigger: TGGCCGCTGGCTCCCGTGACGTGCGTCATGGGCACGCAGGCGCCATTTTGAATCTATCGTCGGCACGTGGGTGCCATTTTGAATCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp CTGAGCCAGTGGCAAACCCGTGGCTGTGGTTTCCACAAGACAACCTaGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATC +
Preference number: 1 (lower is better)
Translates to: LSQWQTRGCGFHKTT*LCAVTPSLQQRLDI
Trigger: GATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCTTGTGGAAACCACAGCCACGGGTTTGCCACTGGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp GACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTaGCATCCAAAAAGCATGGCAGTTTCCCAAGCTCGGCTGCACAGG +
Preference number: 1 (lower is better)
Translates to: DNLALCCHTQPPTAP*HPKSMAVSQARLHR
Trigger: CCTGTGCAGCCGAGCTTGGGAAACTGCCATGCTTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp TTATGTATTCGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTaGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: LCIRSPYCHSGWPRR*PRRNDGEGARSPAP
Trigger: GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR GCA 90 bp AACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTaGTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTCAGC +
Preference number: 1 (lower is better)
Translates to: NKAPQISWLSKSLEG*STQELPRETILSLS
Trigger: GCTGAGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp AGGAAAGATGTCGCTGGAGCTAGTCCTGAGTTCCGACTGTCCCTGTaGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTAGCAAACGT +
Preference number: 1 (lower is better)
Translates to: RKDVAGASPEFRLSL*WESSLGKQDCFSKR
Trigger: ACGTTTGCTAAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAGGACTAGCTCCAGCGACATCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp ACTTCCCATCACCAGAATCCCTTCATGGGAGGGATGGATGCCTGTTaGAACTCACTGACCTATTGGACTGACGCTGGGGTGGTATCTTCA +
Preference number: 1 (lower is better)
Translates to: TSHHQNPFMGGMDAC*NSLTYWTDAGVVSS
Trigger: TGAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGGGATTCTGGTGATGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp CTCTCTGCTGCTGGGACCCAGGGCTTTTTCAGCTGCAGAACCCACTaGACTTCCAGGAATCAAGGAAAAAGTGGAAATGTCCAACTGTGT +
Preference number: 1 (lower is better)
Translates to: LSAAGTQGFFSCRTH*TSRNQGKSGNVQLC
Trigger: ACACAGTTGGACATTTCCACTTTTTCCTTGATTCCTGGAAGTCCAGTGGGTTCTGCAGCTGAAAAAGCCCTGGGTCCCAGCAGCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp ACCAGAATCCCTTCATGGGAGGGATGGATGCCTGTTGAAACTCACTaGCCTATTGGACTGACGCTGGGGTGGTATCTTCATCAGAGCTAT +
Preference number: 1 (lower is better)
Translates to: TRIPSWEGWMPVETH*PIGLTLGWYLHQSY
Trigger: ATAGCTCTGATGAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGGGATTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp GGAATCCGATGTAAGCAATCCACCATCAGCTCACTGATGCTCTCTTaGCCTTCCACACTTCGAGAAGACCTGAAATGTGGTGTCCATTCC +
Preference number: 1 (lower is better)
Translates to: GIRCKQSTISSLMLS*PSTLREDLKCGVHS
Trigger: GGAATGGACACCACATTTCAGGTCTTCTCGAAGTGTGGAAGGGCAAGAGAGCATCAGTGAGCTGATGGTGGATTGCTTACATCGGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp GCGGAGCTTGGTGAAGTCAGGATGAATGATGCCGTCACAGGTTCATaGTTCATGGAAGGAAAGGTAACCAACCTTGTCCTGTCTAGGATG +
Preference number: 1 (lower is better)
Translates to: AELGEVRMNDAVTGS*FMEGKVTNLVLSRM
Trigger: CATCCTAGACAGGACAAGGTTGGTTACCTTTCCTTCCATGAACCATGAACCTGTGACGGCATCATTCATCCTGACTTCACCAAGCTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTaGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGT +
Preference number: 1 (lower is better)
Translates to: SPLTRLHRSAGFQKA*KGAPLRNSQEKPSC
Trigger: ACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp CATGGGAGGGATGGATGCCTGTTGAAACTCACTGACCTATTGGACTaGCGCTGGGGTGGTATCTTCATCAGAGCTATTGTAAGTCATCCA +
Preference number: 1 (lower is better)
Translates to: HGRDGCLLKLTDLLD*RWGGIFIRAIVSHP
Trigger: TGGATGACTTACAATAGCTCTGATGAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp AGTAATTCCAATGCGGGACCATGGCTTTACTACTACAGGCTTGGTTaGTGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTGGAG +
Preference number: 1 (lower is better)
Translates to: SNSNAGPWLYYYRLG*WPIPNLQPLPVMLE
Trigger: CTCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCGCATTGGAATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp TGTTTGCTTTTATTATGTATTCGGAGTCCTTATTGCCATTCTGGCTaGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGG +
Preference number: 1 (lower is better)
Translates to: CLLLLCIRSPYCHSG*PRRWPRRNDGEGAR
Trigger: CCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACATAATAAAAGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 90 bp GAGCTAGTCCTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTaGGAAAGCAGGACTGTTTTAGCAAACGTGTACTCGTTCTATAAA +
Preference number: 1 (lower is better)
Translates to: ELVLSSDCPCGGNPV*ESRTVLANVYSFYK
Trigger: TTTATAGAACGAGTACACGTTTGCTAAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAGGACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp GTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCTTATTaGCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGG +
Preference number: 1 (lower is better)
Translates to: VGVFCLLLLCIRSPY*HSGWPRRWPRRNDG
Trigger: CCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTaGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCTTATTG +
Preference number: 1 (lower is better)
Translates to: PRSSLAAAAAVIALS*SVLFAFIMYSESLL
Trigger: CAATAAGGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 90 bp TTGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTaGAGTCAACTATCCTATGTCCCTCTCTCCATCTTCCCAAGATTT +
Preference number: 1 (lower is better)
Translates to: LVDGQFPISSLFLSC*SQLSYVPLSIFPRF
Trigger: AAATCTTGGGAAGATGGAGAGAGGGACATAGGATAGTTGACTCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTaGTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGA +
Preference number: 1 (lower is better)
Translates to: INQTKVFPGCCGSRY*SKLECSVCFYYVFG
Trigger: TCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 90 bp TTTCAGCTGCAGAACCCACTGGACTTCCAGGAATCAAGGAAAAAGTaGAAATGTCCAACTGTGTTGTCTCTAAATGGTTCCATTGTCTGG +
Preference number: 1 (lower is better)
Translates to: FQLQNPLDFQESRKK*KCPTVLSLNGSIVW
Trigger: CCAGACAATGGAACCATTTAGAGACAACACAGTTGGACATTTCCACTTTTTCCTTGATTCCTGGAAGTCCAGTGGGTTCTGCAGCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp CTGCTTCTCAGTGGCAACAAACTCAAGTTGCTCATCATGCTACCTTaGACATATCTACAAGACACCATTTACTTCCTAACTGCCTTGACA +
Preference number: 1 (lower is better)
Translates to: LLLSGNKLKLLIMLP*TYLQDTIYFLTALT
Trigger: TGTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATATGTGCAAGGTAGCATGATGAGCAACTTGAGTTTGTTGCCACTGAGAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 90 bp AAGTGGAAATGTCCAACTGTGTTGTCTCTAAATGGTTCCATTGTCTaGGAACTGAAACCCTCCATGCTTCACCCTGAACTGTTATTTCTA +
Preference number: 1 (lower is better)
Translates to: KWKCPTVLSLNGSIV*ELKPSMLHPELLFL
Trigger: TAGAAATAACAGTTCAGGGTGAAGCATGGAGGGTTTCAGTTCCCAGACAATGGAACCATTTAGAGACAACACAGTTGGACATTTCCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 90 bp TGTCTTTCATGGCTAATACCAAAGTTGACAATCAATGAGGGTCAATaGTTTCCTGTCATTACAGAAACTTCCCATCACCAGAATCCCTTC +
Preference number: 1 (lower is better)
Translates to: CLSWLIPKLTINEGQ*FPVITETSHHQNPF
Trigger: GAAGGGATTCTGGTGATGGGAAGTTTCTGTAATGACAGGAAAGCATTGACCCTCATTGATTGTCAACTTTGGTATTAGCCATGAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 90 bp CCTACAGGAATACAGGCATTATCAAATGTAGAAATGGTATCACTCTaGAAGATGGGGCTATTTACACAAGTTACAAGAATTGCGTTGCTG +
Preference number: 1 (lower is better)
Translates to: PTGIQALSNVEMVSL*KMGLFTQVTRIALL
Trigger: CAGCAACGCAATTCTTGTAACTTGTGTAAATAGCCCCATCTTTCAGAGTGATACCATTTCTACATTTGATAATGCCTGTATTCCTGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 90 bp AGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTaGTCCCTCAGCCAGGCTGGGACTGGCAGTGAGGCCATGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SLEGCSTQELPRETI*SLSQAGTGSEAMLS
Trigger: GCTCAGCATGGCCTCACTGCCAGTCCCAGCCTGGCTGAGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR TCA 90 bp CGGGACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCGCGCCTGCGTGCCCATaGCGCACGTCACGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: RDHGFTTTGLVDGQFPISAPACP*RTSREP
Trigger: TGGCTCCCGTGACGTGCGTCATGGGCACGCAGGCGC...GGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp CCTGTCTCTCTGCTGCTGGGACCCAGGGCTTTTTCAGCTGCAGAACCCACTGGAGTCTTCCCTGGCTGCTaGGGCAGCCGTTATTGCTCT +
Preference number: 2 (lower is better)
Translates to: PVSLLLGPRAFSAAEPTGVFPGC*GSRYCS
Trigger: AGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGAC...TCCAGTGGGTTCTGCAGCTGAAAAAGCCCTGGGTCCCAGCAGCAGAGAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCGGCCCGTCCTACCCTTaGTGGGAGCCAGCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLGPSYP*WEPALV
Trigger: AACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCC...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR GCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAACCCACCCAACCCGCCTaGTTCTCAGTGGCAACAAAC +
Preference number: 2 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKPTQPA*FSVATN
Trigger: GTTTGTTGCCACTGAGAAGCAGGCGGGTTGGGTGGG...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAACTGCCTTGACATCTaGATGCTACGGTGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: RQPGSVLSHPASNSALTSNCLDI*MLRCSA
Trigger: AGCTGAGCACCGTAGCATGCAGATGTCAAGGCAGTT...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCGGCTGGCCTCGTCGTTaGCCAAGGAGAAATGATGGG +
Preference number: 2 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLGWPRR*PRRNDG
Trigger: CCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCC...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR CCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCCCTTCATGGGAGGGATaGATGCCTGTTGAAACTCAC +
Preference number: 2 (lower is better)
Translates to: RQPGSVLSHPASNSALTSPSWEG*MPVETH
Trigger: GTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGG...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp AACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGAGGAGCTCGGTCGCCTaGTCCCAGCTGCTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: NNDNKGTSTQNQALLGNLRSSVA*SQLLSP
Trigger: GGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCT...CAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR GCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCTGCGGCAGCCGTTATTaGTCTAAGTTGGAGTGTTCT +
Preference number: 2 (lower is better)
Translates to: RQPGSVLSHPASNSALTSCGSRY*SKLECS
Trigger: AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCA...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTGGCCCGTCCTACCCTTaGTGGGAGCCAGCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLGPSYP*WEPALV
Trigger: AACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCC...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR GCA 90 bp CATTACAGAAACTTCCCATCACCAGAATCCCTTCATGGGAGGGATGGATGCCTGTCGCCTGCTCCCAGCTaGTCAGTCCCAACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: HYRNFPSPESLHGRDGCLSPAPS*SVPTFC
Trigger: GCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGA...CAGGCATCCATCCCTCCCATGAAGGGATTCTGGTGATGGGAAGTTTCTGTAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTAAGGTCTTCCCTGGCTaGTGCGGCAGCCGTTATTGC +
Preference number: 2 (lower is better)
Translates to: SPLTRLHRSAGFQKAWKGKVFPG*CGSRYC
Trigger: GCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT...ACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCCCGTCCTACCCTTGCTaGGAGCCAGCTCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAPSYPC*EPALVL
Trigger: CAGAACCAGAGCTGGCTCCCAGCAAGGGTAGGACGG...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR TCA 90 bp GAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTCCCACCCTGGCGCTTTaGTTTCCAGTTTGGGAAATT +
Preference number: 2 (lower is better)
Translates to: EFRLSLWWESSLGKQDCFPTLAL*FPVWEI
Trigger: AATTTCCCAAACTGGAAATCAAAGCGCCAGGGTGGG...AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp TCAAAAGCAATTCACATTGGTCATGATGACACACACCTGCAGTCCCAGCTACTCTCAGTCCCAACTTTCTaGCCGCATGCGGCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: SKAIHIGHDDTHLQSQLLSVPTF*PHAARP
Trigger: AGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGA...GAGTAGCTGGGACTGCAGGTGTGTGTCATCATGACCAATGTGAATTGCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp ACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCATTCGGAGTCCTTATTaGCATTCTGGCTGGCCTCGT +
Preference number: 2 (lower is better)
Translates to: THKPNQGLPWLLRQPLLLIRSPY*HSGWPR
Trigger: ACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAAT...GAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR CCA 90 bp GACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCCGACTGTCCCTGTGGTaGGAATCCAGTCTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: DHGFTTTGLVDGQFPISSRLSLW*ESSLGK
Trigger: CTTTCCCAGACTGGATTCCCACCACAGGGACAGTCG...GCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCCTCTTCCTGTCATGTTaGAGTCAACTATCCTATGTC +
Preference number: 2 (lower is better)
Translates to: RQPGSVLSHPASNSALTSLFLSC*SQLSYV
Trigger: GACATAGGATAGTTGACTCCAACATGACAGGAAGAG...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTCTCATCATGCTACCTTaGACATATCTACAAGACACC +
Preference number: 2 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSLIMLP*TYLQDT
Trigger: GGTGTCTTGTAGATATGTGCAAGGTAGCATGATGAG...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 90 bp CCCCAAGTAATTCCAATGCGGGACCATGGCTTTACTACTACAGGCTaGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGT +
Preference number: 2 (lower is better)
Translates to: PQVIPMRDHGFTTTG*VDGQFPISSLFLSC
Trigger: ACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCGCATTGGAATTACTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCCGTCCTACCCTTGCTaGGAGCCAGCTCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALPSYPC*EPALVL
Trigger: CAGAACCAGAGCTGGCTCCCAGCAAGGGTAGGACGG...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR CCA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCCCGCCTGCTTCTCAGTaGCAACAAACTCAAGTTGCT +
Preference number: 2 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAPPASQ*QQTQVA
Trigger: AGCAACTTGAGTTTGTTGCCACTGAGAAGCAGGCGG...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCGACATCCAAAAAGCATaGCAGTTTCCCAAGCTCGGC +
Preference number: 2 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKADIQKA*QFPKLG
Trigger: GCCGAGCTTGGGAAACTGCCATGCTTTTTGGATGTC...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR TCA 90 bp TTCTATAAAAATGGAATCTGTTCTGCAGGTTACCGTCCCTCCCCGCCCAAGCATTGGCCTACATGCCCATaGACCAGCTTCAAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: FYKNGICSAGYRPSPPKHWPTCP*TSFKSN
Trigger: ATTGCTTTTGAAGCTGGTTCATGGGCATGTAGGCCA...ATGCTTGGGCGGGGAGGGACGGTAACCTGCAGAACAGATTCCATTTTTATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR TCA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTTGCTGTAGGAAAATTTaGACTGCACCCAATTTTCCA +
Preference number: 2 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPCCRKI*TAPNFP
Trigger: TGGAAAATTGGGTGCAGTTCAAATTTTCCTACAGCA...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp CGGGACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCTTGTCCTGTCTAGGATaGCAGATGAGAAAGAGTATC +
Preference number: 2 (lower is better)
Translates to: RDHGFTTTGLVDGQFPISLSCLG*QMRKSI
Trigger: GATACTCTTTCTCATCTGGCATCCTAGACAGGACAA...GGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp TGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATTCCTTATTGCCATTCTaGCTGGCCTCGTCGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CCGSRYCSKLECSVCFYYSLLPF*LASSLA
Trigger: GGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGA...ATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR GCA 90 bp GTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCTCAGTCCCAACTTTCTaGCCGCATGCGGCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: VIALSWSVLFAFIMYSESSVPTF*PHAARP
Trigger: AGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGA...GGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR TCA 90 bp CAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTGGAGACGTTATTTATGGGTaGGCAAGAATGTTCATTAGA +
Preference number: 2 (lower is better)
Translates to: QAWLMANSQSPASSCHVGDVIYG*ARMFIR
Trigger: TCTAATGAACATTCTTGCTCACCCATAAATAACGTC...TCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTATTCGGAGTCCTTATTaGCATTCTGGCTGGCCTCGT +
Preference number: 2 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALIRSPY*HSGWPR
Trigger: ACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAAT...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CAA 90 bp CCTGCTTCTCAGTGGCAACAAACTCAAGTTGCTCATCATGCTACCTaGCACATATCTACAAGACACCATTTACTTCCTAACTGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: PASQWQQTQVAHHAT*HISTRHHLLPNCLD
Trigger: GTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATATGTGCAAGGTAGCATGATGAGCAACTTGAGTTTGTTGCCACTGAGAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 90 bp CTGGACTTCCAGGAATCAAGGAAAAAGTGGAAATGTCCAACTGTGTaGTCTCTAAATGGTTCCATTGTCTGGGAACTGAAACCCTCCATG +
Preference number: 2 (lower is better)
Translates to: LDFQESRKKWKCPTV*SLNGSIVWELKPSM
Trigger: CATGGAGGGTTTCAGTTCCCAGACAATGGAACCATTTAGAGACAACACAGTTGGACATTTCCACTTTTTCCTTGATTCCTGGAAGTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR GCA 90 bp GGGCTATTTACACAAGTTACAAGAATTGCGTTGCTGTCTTTAAGAAGTCTCCTCAAATGGAATCTGTTCTaGAGGTTACCGTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GLFTQVTRIALLSLRSLLKWNLF*RLPSLP
Trigger: GGGGAGGGACGGTAACCTGCAGAACAGATTCCATTT...GAGGAGACTTCTTAAAGACAGCAACGCAATTCTTGTAACTTGTGTAAATAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 90 bp CTACCTTGCACATATCTACAAGACACCATTTACTTCCTAACTGCCTaGACATCTGCATGCTACGGTGCTCAGCTGTTTGACATCAACATA +
Preference number: 2 (lower is better)
Translates to: LPCTYLQDTIYFLTA*TSACYGAQLFDINI
Trigger: TATGTTGATGTCAAACAGCTGAGCACCGTAGCATGCAGATGTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATATGTGCAAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CCA 90 bp TCAAAAGCAATTCACATTGGTCATGATGACACACACCTGCAGTCCCAGCTACTCTTTAGTAAAGCTGGTTaGGCACATTTGCTAGGATCT +
Preference number: 2 (lower is better)
Translates to: SKAIHIGHDDTHLQSQLLFSKAG*AHLLGS
Trigger: AGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAA...GAGTAGCTGGGACTGCAGGTGTGTGTCATCATGACCAATGTGAATTGCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 90 bp GGACAAGACAGTCTCAAGGAAAAACATCAATATCCAAACACCGTATaGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: GQDSLKEKHQYPNTV*SPLTRLHRSAGFQK
Trigger: TTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGTGTTTGGATATTGATGTTTTTCCTTGAGACTGTCTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp GCCGACGATAGATTCAAAATGGCGCCTGCGTGCCCATaGCGCACGTCACGGGAGCCAGCGGCCAGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: ADDRFKMAPACP*RTSREPAASPL
Trigger: GAGGGGGCTGGCCGCTGGCTCCCGTGACGTGCGTCATGGGCACGCAGGCGCCATTTTGAATCTATCGTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 72 bp AATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAGCTaGTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGT +
Preference number: 3 (lower is better)
Translates to: NDGEGARSPAPS*SVPTFCPHAAR
Trigger: ACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCTTCCCCATCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR CAA 90 bp CTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTCGGCCCGTCCTACCCTaGCTGGGAGCCAGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: LSSDCPCGGNPVWESRTVRPVLP*LGASSG
Trigger: ACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCCG...AACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp CAAAATGGCACCCACGTGCCGACGATAGATTCAAAATaGCGCCTGCGTGCCCATGACGCACGTCACGGGAGC +
Preference number: 3 (lower is better)
Translates to: QNGTHVPTIDSK*RLRAHDARHGS
Trigger: GCTCCCGTGACGTGCGTCATGGGCACGCAGGCGCCATTTTGAATCTATCGTCGGCACGTGGGTGCCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp CGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTaGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCG +
Preference number: 3 (lower is better)
Translates to: RSPYCHSGWPRR*PRRNDGEGARS
Trigger: CGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR-3UTR CAA 90 bp CCTGTCTCTCTGCTGCTGGGACCCAGGGCTTTTTCAGCTGCAGAACCCACTGGAAAAATAGCATGTAGCTaGTTCCCTCCTCCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: PVSLLLGPRAFSAAEPTGKIACS*FPPPSP
Trigger: GGGGGAGGGAGGAGGGAACAAGCTACATGCTATTTT...TCCAGTGGGTTCTGCAGCTGAAAAAGCCCTGGGTCCCAGCAGCAGAGAGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp GCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTaGCATCCAAAAAGCATGGCAGTTTCCCAAGCTCGG +
Preference number: 3 (lower is better)
Translates to: ALCCHTQPPTAP*HPKSMAVSQAR
Trigger: CCGAGCTTGGGAAACTGCCATGCTTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp GGCCTCACCCACAGGCGGAGCTTGGTGAAGTCAGGATaGATGATGCCGTCACAGGTTCATGGTTCATGGAAG +
Preference number: 3 (lower is better)
Translates to: GLTHRRSLVKSG*MMPSQVHGSWK
Trigger: CTTCCATGAACCATGAACCTGTGACGGCATCATTCATCCTGACTTCACCAAGCTCCGCCTGTGGGTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp GTCGCTGGAGCTAGTCCTGAGTTCCGACTGTCCCTGTaGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTT +
Preference number: 3 (lower is better)
Translates to: VAGASPEFRLSL*WESSLGKQDCF
Trigger: AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAGGACTAGCTCCAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp AGGGCTCCTCAACACACACCCCTGGGTCAGACGTTCTaGGAGGGAATAGGCAGCATTCCTCACTCTACAGAA +
Preference number: 3 (lower is better)
Translates to: RAPQHTPLGQTF*EGIGSIPHSTE
Trigger: TTCTGTAGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTGTTGAGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp CCCAGCCTCCAACAGCGCCTTGACATCCAAAAAGCATaGCAGTTTCCCAAGCTCGGCTGCACAGGGAAAACA +
Preference number: 3 (lower is better)
Translates to: PSLQQRLDIQKA*QFPKLGCTGKT
Trigger: TGTTTTCCCTGTGCAGCCGAGCTTGGGAAACTGCCATGCTTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp CACCAGAATCCCTTCATGGGAGGGATGGATGCCTGTTaGAACTCACTGACCTATTGGACTGACGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: HQNPFMGGMDAC*NSLTYWTDAGV
Trigger: CACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGGGATTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp CTGCTCTTCAGCCTAATACTGCTCTGTGGGAAAACTTaGTCCATTTCCCCCAGGGCTCCTCAACACACACCC +
Preference number: 3 (lower is better)
Translates to: LLFSLILLCGKT*SISPRAPQHTP
Trigger: GGGTGTGTGTTGAGGAGCCCTGGGGGAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGGCTGAAGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CAA 90 bp GAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTGCTGGTTGGGCACATTaGCTAGGATCTGTGGGTTTC +
Preference number: 3 (lower is better)
Translates to: EFRLSLWWESSLGKQDCFAGWAH*LGSVGF
Trigger: GAAACCCACAGATCCTAGCAAATGTGCCCAACCAGC...AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp CTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTaGGAAAGCAGGACTGTTTTAGCAAACGTGTACTCG +
Preference number: 3 (lower is better)
Translates to: LSSDCPCGGNPV*ESRTVLANVYS
Trigger: CGAGTACACGTTTGCTAAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp TACCAGTCACCTGCTCTTCAGCCTAATACTGCTCTGTaGGAAAACTTGGTCCATTTCCCCCAGGGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: YQSPALQPNTAL*ENLVHFPQGSS
Trigger: TGAGGAGCCCTGGGGGAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGGCTGAAGAGCAGGTGACTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CAA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTCTGAACAAAATGGCTTaGGGAGGGAATGATGGGAGC +
Preference number: 3 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPLNKMA*GGNDGS
Trigger: GCTCCCATCATTCCCTCCCAAAGCCATTTTGTTCAG...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp CCTTCATGGGAGGGATGGATGCCTGTTGAAACTCACTaGCCTATTGGACTGACGCTGGGGTGGTATCTTCAT +
Preference number: 3 (lower is better)
Translates to: PSWEGWMPVETH*PIGLTLGWYLH
Trigger: ATGAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp AATGCGGGACCATGGCTTTACTACTACAGGCTTGGTTaGTGGCCAATTCCCAATCTCCAGCCTCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: NAGPWLYYYRLG*WPIPNLQPLPV
Trigger: GACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 72 bp CCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTaGTCCACTCAGGAACTCCCAAGAGAAACCATCTTG +
Preference number: 3 (lower is better)
Translates to: PQISWLSKSLEG*STQELPRETIL
Trigger: CAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp TTCCAATGCGGGACCATGGCTTTACTACTACAGGCTTaGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: FQCGTMALLLQA*LMANSQSPASS
Trigger: GGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCGCATTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CAA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTCGTTATTGCTCTAAGTaGGAGTGTTCTGTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSRYCSK*ECSVCF
Trigger: AAAGCAAACAGAACACTCCAACTTAGAGCAATAACG...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp ATGGAATCCGATGTAAGCAATCCACCATCAGCTCACTaGTGCTCTCTTGCCCTTCCACACTTCGAGAAGACC +
Preference number: 3 (lower is better)
Translates to: MESDVSNPPSAH*CSLALPHFEKT
Trigger: GGTCTTCTCGAAGTGTGGAAGGGCAAGAGAGCATCAGTGAGCTGATGGTGGATTGCTTACATCGGATTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp CATTGTCTGGGAACTGAAACCCTCCATGCTTCACCCTaGACTGTTATTTCTAGAGGAAGCAGGGAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: HCLGTETLHASP*TVISRGSREPL
Trigger: CAGAGGCTCCCTGCTTCCTCTAGAAATAACAGTTCAGGGTGAAGCATGGAGGGTTTCAGTTCCCAGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CCA 72 bp TTTGCCCTCCCTTCCTCCCCCTTTAGTAAAGCTGGTTaGGCACATTTGCTAGGATCTGTGGGTTTCATCACT +
Preference number: 3 (lower is better)
Translates to: FALPSSPFSKAG*AHLLGSVGFIT
Trigger: AGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAAGGGGGAGGAAGGGAGGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 72 bp GGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTaGAGTCAACTATCCTATGTCCCTCTCTCCATCTTC +
Preference number: 3 (lower is better)
Translates to: GQFPISSLFLSC*SQLSYVPLSIF
Trigger: GAAGATGGAGAGAGGGACATAGGATAGTTGACTCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CAA 90 bp CGGGACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCGCTCATCATGCTACCTaGCACATATCTACAAGACAC +
Preference number: 3 (lower is better)
Translates to: RDHGFTTTGLVDGQFPISAHHAT*HISTRH
Trigger: GTGTCTTGTAGATATGTGCAAGGTAGCATGATGAGC...GGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp TGGAAAACTCTCTGGAATCCAGCGTGGATGAGCAACTaGACAAAATGGCTTTGGGAGGGAATGATGGGAGCT +
Preference number: 3 (lower is better)
Translates to: WKTLWNPAWMSN*TKWLWEGMMGA
Trigger: AGCTCCCATCATTCCCTCCCAAAGCCATTTTGTTCAGTTGCTCATCCACGCTGGATTCCAGAGAGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR-3UTR CAA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTACTGTGGTCTAAAATaGCTTCGGTGGCCTACATGC +
Preference number: 3 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAYCGLK*LRWPTC
Trigger: GCATGTAGGCCACCGAAGCAATTTTAGACCACAGTA...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp GATGGATGCCTGTTGAAACTCACTGACCTATTGGACTaGCGCTGGGGTGGTATCTTCATCAGAGCTATTGTA +
Preference number: 3 (lower is better)
Translates to: DGCLLKLTDLLD*RWGGIFIRAIV
Trigger: TACAATAGCTCTGATGAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGGCATCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 72 bp ACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTaGTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTAT +
Preference number: 3 (lower is better)
Translates to: TKVFPGCCGSRY*SKLECSVCFYY
Trigger: ATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 72 bp TTATTATGTATTCGGAGTCCTTATTGCCATTCTGGCTaGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: LLCIRSPYCHSG*PRRWPRRNDGE
Trigger: TTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACATAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 72 bp TCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTaGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAG +
Preference number: 3 (lower is better)
Translates to: SLAAAAAVIALS*SVLFAFIMYSE
Trigger: CTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CCA 72 bp TGTCCAACTGTGTTGTCTCTAAATGGTTCCATTGTCTaGGAACTGAAACCCTCCATGCTTCACCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: CPTVLSLNGSIV*ELKPSMLHPEL
Trigger: CAGTTCAGGGTGAAGCATGGAGGGTTTCAGTTCCCAGACAATGGAACCATTTAGAGACAACACAGTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR GCA 72 bp TTGCACATATCTACAAGACACCATTTACTTCCTAACTaGCTTGACATCTGCATGCTACGGTGCTCAGCTGTT +
Preference number: 3 (lower is better)
Translates to: LHISTRHHLLPN*LDICMLRCSAV
Trigger: AACAGCTGAGCACCGTAGCATGCAGATGTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATATGTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR TCA 72 bp GTGACGGTGACATTGAGGCTTGACGTTATTTATGGGTaGGCAAGAATGTTCATTAGATGTAGACTCTCAAAG +
Preference number: 3 (lower is better)
Translates to: VTVTLRLDVIYG*ARMFIRCRLSK
Trigger: CTTTGAGAGTCTACATCTAATGAACATTCTTGCTCACCCATAAATAACGTCAAGCCTCAATGTCACCGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCGAGGGCAGCGCCGTaGGGGGAACATCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPSRAAP*GEHPGQ
Trigger: CTGGCCGGGATGTTCCCCGCACGGCGCTGCCCTCGA...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGGGACGCCCACCCTGGTaGCCTAACCAGGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPGRPPW*PNQDLA
Trigger: GGCCAGGTCCTGGTTAGGCCACCAGGGTGGGCGTCC...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCAGGGCTCTGTGGCACTaGGGGGAACCGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAARALWH*GEPGVG
Trigger: TCCCACCCCCGGTTCCCCCCAGTGCCACAGAGCCCT...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTGGGAACCGAGGCGGCTaGGCGCGCGAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSPAPSCSVPTFCPHAARGNRGG*AREEEK
Trigger: CTTCTCTTCCTCGCGCGCCCAGCCGCCTCGGTTCCC...ACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp CGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTGGTAGGCCAGGCAGATaGTGGCCGACCGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: RSPAPSCSVPTFCPHAARGRPGR*WPTARC
Trigger: GCATCTCGCGGTCGGCCACCATCTGCCTGGCCTACC...ACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCGCGCCAGGAACGGTCTaGAGTCCAGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAAAPGTV*SPAAGT
Trigger: AGTGCCTGCTGCTGGACTGCAGACCGTTCCTGGCGC...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGGAACCGGGGGTGGGATaGCTGCCAGGGCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPEPGVG*LPGPWF
Trigger: AAACCAAGGCCCTGGCAGCCATCCCACCCCCGGTTC...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp CTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCACTGCTGGGGGCCGAGTaGACGCCCACGGAGACCGGA +
Preference number: 4 (lower is better)
Translates to: LVVGQGEMMGKELGRLLPLLGAE*TPTETG
Trigger: TCCGGTCTCCGTGGGCGTGCACTCGGCCCCCAGCAG...TGGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCAACTTTCTGCCCGCATaGGGCCCGTCCTACCCTTGC +
Preference number: 4 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAANFLPA*GPSYPC
Trigger: GCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTT...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp CCTGTCTCTCTGCTGCTGGGACCCAGGGCTTTTTCAGCTGCAGAACCCACTGGACGGTGCGCTCGGCGTTaGGGCGCAGCGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PVSLLLGPRAFSAAEPTGRCARR*GAAPAP
Trigger: TGGTGCAGGCGCTGCGCCGCAACGCCGAGCGCACCG...TCCAGTGGGTTCTGCAGCTGAAAAAGCCCTGGGTCCCAGCAGCAGAGAGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGCCGTCCTACCCTTGCTaGGAGCCAGCTCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPPSYPC*EPALVL
Trigger: CAGAACCAGAGCTGGCTCCCAGCAAGGGTAGGACGG...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR TCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGCGTTTCCCCAGCAGCTaGCAGGTCAAATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPRFPSS*QVKWAG
Trigger: TCCTGCCCATTTGACCTGTCAGCTGCTGGGGAAACG...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp GGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCGCCGCCTTGAGACTCTaGACACAGACACCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GRLLPAAQSQLSARMRPVAALRL*TQTPGP
Trigger: AGGTCCAGGTGTCTGTGTTCAGAGTCTCAAGGCGGC...GACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCGGAGACCGGAAAGCTaGAGACGAACTGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRRRPES*RRTARW
Trigger: CCACCTCGCAGTTCGTCTTCAGCTTTCCGGTCTCCG...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTAGGGCTCTGTGGCACTaGGGGGAACCGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPARALWH*GEPGVG
Trigger: TCCCACCCCCGGTTCCCCCCAGTGCCACAGAGCCCT...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR TCA 90 bp CCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCTCTCATAGCCGCCTTTaGGCAGGCAGATGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PAPSCSVPTFCPHAARPTSHSRL*AGRCRC
Trigger: GCACCGACATCTGCCTGCTCAAAGGCGGCTATGAGA...GGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp ATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCTGCTGGGGGCCGAGTaGACGCCCACGGAGACCGGA +
Preference number: 4 (lower is better)
Translates to: ILAGLVVGQGEMMGKELGLLGAE*TPTETG
Trigger: TCCGGTCTCCGTGGGCGTGCACTCGGCCCCCAGCAG...ACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTAGGAGCTCGGTCGCCTaGTCCCAGCTGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPARSSVA*SQLLSP
Trigger: GGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCT...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCATTCAAAATGGCGCCTaGGTGCCCATGACGCACGTC +
Preference number: 4 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAAIQNGA*VPMTHV
Trigger: GACGTGCGTCATGGGCACGCAGGCGCCATTTTGAAT...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCGAATCGGTCTGGCTaGGGAAATGGAGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPSNRSG*GNGGGW
Trigger: CCAACCTCCTCCATTTCCCCAGCCAGACCGATTCGA...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTCTCCCAGTCCTCCTaGGCGATCTGCTATGTTCAG +
Preference number: 4 (lower is better)
Translates to: GRLLPAAQSQLSARMRPVLSQSS*AICYVQ
Trigger: CTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAG...GACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCACCTAACGCCATGCTaGGGGCTCGAACTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRHLTPC*GLELVC
Trigger: GCAAACCAGTTCGAGCCCCCAGCATGGCGTTAGGTG...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGCTCAGGAGGCCGAGGTaGGAGGATCTCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGLRRPR*EDLLSP
Trigger: TGGGCTCAAGAGATCCTCCCACCTCGGCCTCCTGAG...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGGCCATGCTGAGCCAGTaGCAAACCCGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGAMLSQ*QTRGCG
Trigger: ACCACAGCCACGGGTTTGCCACTGGCTCAGCATGGC...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCACCATCAGCTCACTaGTGCTCTCTTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRPPSAH*CSLALP
Trigger: TGGAAGGGCAAGAGAGCATCAGTGAGCTGATGGTGG...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTTCGTTAGCCAGGAACTaGCTCCCGGTAAGGAAATCG +
Preference number: 4 (lower is better)
Translates to: RSPAPSCSVPTFCPHAARSLARN*LPVRKS
Trigger: CGATTTCCTTACCGGGAGGCAGTTCCTGGCTAACGA...ACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTGGCCCGTCCTACCCTTaGTGGGAGCCAGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAGPSYP*WEPALV
Trigger: AACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCC...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GAAGGAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATTCAGTCCCAACTTTCTaGCCGCATGCGGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: EGARSPAPSCSVPTFCPHSVPTF*PHAARP
Trigger: AGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGA...ATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCGACTGTCCCTGTGGTaGGAATCCAGTCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRRLSLW*ESSLGK
Trigger: CTTTCCCAGACTGGATTCCCACCACAGGGACAGTCG...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCGTCTTCCCTGGCTGCTaGGGCAGCCGTTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPVFPGC*GSRYCS
Trigger: AGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGAC...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp CGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCATGGGAGGGATGGATaGCTGTTGAAACTCACTGAC +
Preference number: 4 (lower is better)
Translates to: RSPAPSCSVPTFCPHAARHGRDG*LLKLTD
Trigger: GTCAGTGAGTTTCAACAGGCATCCATCCCTCCCATG...ACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGAGCCCAAGGAAGTTGTaGCGGTCTAAAGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SVACSQLLSPNFLPACGPSPRKL*RSKGSN
Trigger: ATTTGACCCTTTAGACCGTCACAACTTCCTTGGGCT...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGGGCTGGGACTGGCAGTaGGGCCATGCTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLGWDWQ*GHAEPV
Trigger: CACTGGCTCAGCATGGCCTCACTGCCAGTCCCAGCC...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTGGAGCAGGTAGGGCAGGCTaGTGGGGGCCGAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: QAWLMANSQSPASSCHVGAGRAG*WGPSAR
Trigger: GCGTGCACTCGGCCCCCAGCAGCCTGCCCTACCTGC...TCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCTTGCGGCGCAGCGCCTaGACCACCAGCGACACGGTG +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLLRRSA*TTSDTV
Trigger: CACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAA...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCGGCTCTTCTAAAAATTaGCAGTGGGAGCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSVACSQLLSPNFLPACGGSSKN*QWELWP
Trigger: AGGCCAGAGCTCCCACTGGCAATTTTTAGAAGAGCC...GCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGGACTCCACGTGGGGCTaGAACCCAGTCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEDSTWG*NPVPAL
Trigger: CAGGGCTGGGACTGGGTTCCAGCCCCACGTGGAGTC...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGAGCAGTCCATTTTTGTaGGTGGAGCCCACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGSSPFL*VEPTSP
Trigger: AGGAGAGGTGGGCTCCACCCACAAAAATGGACTGCT...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTGCTGGGGGCTCGAACTaGTTTGCAGTCTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAAGGSN*FAVSPS
Trigger: ACTGGGAGAGACTGCAAACCAGTTCGAGCCCCCAGC...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAACCGCAGCACAGGACGTaGCCAGCACCTGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKPQHRT*PAPGTR
Trigger: TCGAGTCCCAGGTGCTGGCCACGTCCTGTGCTGCGG...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAACCTCCATCGTCACCATaGTCGCCGGGAACCGAGGCG +
Preference number: 4 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKPPSSP*SPGTEA
Trigger: CGCCTCGGTTCCCGGCGACCATGGTGACGATGGAGG...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGCTCTGTGGGAAAACTTaGTCCATTTCCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGLCGKT*SISPRA
Trigger: AGCCCTGGGGGAAATGGACCAAGTTTTCCCACAGAG...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCGGGAATGATGGGAGCTaGGGCCTACCAGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSVLSHPASNSALTSGNDGS*GLPVTC
Trigger: GCAGGTGACTGGTAGGCCCCAGCTCCCATCATTCCC...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCGGTGACATTGAGGCTTaGCGTTATTTATGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSVACSQLLSPNFLPACGGDIEA*RYLWVS
Trigger: GCTCACCCATAAATAACGTCAAGCCTCAATGTCACC...GCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCCCATTGTCTGGGAACTaGAACCCTCCATGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPPLSGN*NPPCFT
Trigger: GGTGAAGCATGGAGGGTTTCAGTTCCCAGACAATGG...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp GAAGGAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATCCTCCAACAGCGCCTTaGCATCCAAAAAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: EGARSPAPSCSVPTFCPHPPTAP*HPKSMA
Trigger: TGCCATGCTTTTTGGATGTCAAGGCGCTGTTGGAGG...ATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAAGCAGTGAGGCCATGCTaGGCCAGTGGCAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKAVRPC*ASGKPV
Trigger: CACGGGTTTGCCACTGGCTCAGCATGGCCTCACTGC...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGCGTCCCAGAGGAATTaGCCTCATCTCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: AILAGLVVGQGEMMGKELASQRN*PHLSHQ
Trigger: CTGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGC...GAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGCGGGGCCTAAGTGGCTaGACCCCCGGAAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKRGLSG*TPGSPR
Trigger: CCTTGGGCTTCCGGGGGTGCAGCCACTTAGGCCCCG...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp TTCTATAAAAATGGAATCTGTTCTGCAGGTTACCGTCCCTCCCCGCCCAAGCATGCGCCAGCGCTGCCCTaGCTACGCTCCTCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: FYKNGICSAGYRPSPPKHAPALP*LRSSGA
Trigger: AGCGCCGGAGGAGCGTAGGCAGGGCAGCGCTGGCGC...ATGCTTGGGCGGGGAGGGACGGTAACCTGCAGAACAGATTCCATTTTTATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CATTACAGAAACTTCCCATCACCAGAATCCCTTCATGGGAGGGATGGATGCCTGCACTGGCGCCAGCGCTaGCCTGCCTACGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HYRNFPSPESLHGRDGCLHWRQR*PAYAPP
Trigger: CGGAGGAGCGTAGGCAGGGCAGCGCTGGCGCCAGTG...CAGGCATCCATCCCTCCCATGAAGGGATTCTGGTGATGGGAAGTTTCTGTAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp ATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCCTCCCGTGTATTTTTaGCGGTCGCGCGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ILAGLVVGQGEMMGKELGPPVYF*RSRGSC
Trigger: ACAGGAGCCGCGCGACCGGCAAAAATACACGGGAGG...ACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTCCACCAGCGACACGGTaGTGTCCTCGCGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EFRLSLWWESSLGKQDCFPPATR*CPRGGS
Trigger: AGAGCCTCCGCGAGGACAGCACCGTGTCGCTGGTGG...AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTGGGACTGGGCTCATTTaGAGGAGCAAAAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAGTGLI*RSKRQP
Trigger: GGGCTGTCTTTTGCTCCTCCAAATGAGCCCAGTCCC...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGACCTTCCTGCCAGCTaGCTGACACCTAACGCCATG +
Preference number: 4 (lower is better)
Translates to: AILAGLVVGQGEMMGKELDLPAS*LTPNAM
Trigger: CATGGCGTTAGGTGTCAGCCAGCTGGCAGGAAGGTC...GAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCTCCTTCAAAGTGGTTTaGGCAGTCCGAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: SSVACSQLLSPNFLPACGSFKVV*AVRGDI
Trigger: AATGTCTCCTCGGACTGCCCAAACCACTTTGAAGGA...GCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGGTAGGCCAGGCAGATaGTGGCCGACCGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGGRPGR*WPTARC
Trigger: GCATCTCGCGGTCGGCCACCATCTGCCTGGCCTACC...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGAGCCAGCTCTGGTTCTaGGGCCCCCAGGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKSQLWF*GPQGGS
Trigger: AGAGCCGCCCTGGGGGCCCCAGAACCAGAGCTGGCT...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGGGCTCCTGTCGCCACTaGCGCCAGCGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLGSCRH*RQRCPA
Trigger: GGCAGGGCAGCGCTGGCGCCAGTGGCGACAGGAGCC...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTTTCCTGCCAGCTGGCTaGCACCTAACGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVFLPAG*HLTPCW
Trigger: CCAGCATGGCGTTAGGTGTCAGCCAGCTGGCAGGAA...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCGGAGACCGGAAAGCTaGAGACGAACTGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKERRPES*RRTARW
Trigger: CCACCTCGCAGTTCGTCTTCAGCTTTCCGGTCTCCG...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR TCA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCGCGCCTGCGTGCCCATaGCGCACGTCACGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAAPACP*RTSREP
Trigger: TGGCTCCCGTGACGTGCGTCATGGGCACGCAGGCGC...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGAGACCTAGCAACTTATaGTTCCAGTCCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGRPSNL*FQSLAV
Trigger: GACAGCCAAGGACTGGAAGCATAAGTTGCTAGGTCT...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp CTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTCAGTCCCAACTTTCTaGCCGCATGCGGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LSSDCPCGGNPVWESRTVSVPTF*PHAARP
Trigger: AGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGA...AACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TGTATTCGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGATCCCTTCCTCCCGGGTaGACAGGTCGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CIRSPYCHSGWPRRWPRRSLPPG*TGRKRS
Trigger: GCTCCTCTTCCGACCTGTCCACCCGGGAGGAAGGGA...TCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTTCTCTTGGAGCGCTTTaGGGAGAAGGGAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: ILAGLVVGQGEMMGKELGSLGAL*GEGRGT
Trigger: AGTCCCCCTCCCTTCTCCCCAAAGCGCTCCAAGAGA...ACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGGACAAGCTCAAACAATaGCGCGGACGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPDKLKQ*RGRPPW
Trigger: CCAGGGTGGGCGTCCGCGCCATTGTTTGAGCTTGTC...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTGTCTGGCTGGGGAAATaGAGGAGGTTGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVVWLGK*RRLGRE
Trigger: CTCCCTCCCCAACCTCCTCCATTTCCCCAGCCAGAC...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp CCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCTATGCTTCCAGTCCTTaGCTGTCATGGGCATTGTAT +
Preference number: 4 (lower is better)
Translates to: PAPSCSVPTFCPHAARPTYASSP*LSWALY
Trigger: ATACAATGCCCATGACAGCCAAGGACTGGAAGCATA...GGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGAGACGAACTGCGAGGTaGGGGTGGCGGGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKRRTAR*GWRGSC
Trigger: GCAAGACCCCCGCCACCCCCACCTCGCAGTTCGTCT...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGAAGTGGCCGCAAACTTaGTCCTCAAGGGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPKWPQT*SSRAPA
Trigger: CGCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTT...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGCAGAGCTGTGCTGTTTaGTGCCATTGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLQSCAV*CHCPPG
Trigger: CCCAGGAGGGCAATGGCATCAAACAGCACAGCTCTG...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTACCCAGTCCCAGCCCTaGTGTGTTCTAGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSTQSQP*CVLAGP
Trigger: GGGACCAGCTAGAACACAGCAGGGCTGGGACTGGGT...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp AAAGTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGAGGAGCTCGGTCGCCTaGTCCCAGCTGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: KVKLTHKPNQGLPWLLRQRSSVA*SQLLSP
Trigger: GGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCT...CTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGGTCTTCCCTGGCTGCTaGGGCAGCCGTTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPVFPGC*GSRYCS
Trigger: AGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGAC...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGAAGGTCTTCCCTGGCTaGTGCGGCAGCCGTTATTGC +
Preference number: 4 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLKVFPG*CGSRYC
Trigger: GCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp TCAAAAGCAATTCACATTGGTCATGATGACACACACCTGCAGTCCCAGCTACTCCCGGGCCGCCTAGGCTaGAGAAAGGGGCGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SKAIHIGHDDTHLQSQLLPGRLG*RKGRAR
Trigger: TCTCGCCCGCCCCTTTCTGCAGCCTAGGCGGCCCGG...GAGTAGCTGGGACTGCAGGTGTGTGTCATCATGACCAATGTGAATTGCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TTCTATAAAAATGGAATCTGTTCTGCAGGTTACCGTCCCTCCCCGCCCAAGCATGCAGGCAGATGTCGGTaGGCTCGGCGTTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: FYKNGICSAGYRPSPPKHAGRCR*ARRCGA
Trigger: TGCGCCGCAACGCCGAGCGCACCGACATCTGCCTGC...ATGCTTGGGCGGGGAGGGACGGTAACCTGCAGAACAGATTCCATTTTTATAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCCCACCCAACCCGCCTaGTTCTCAGTGGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVPTQPA*FSVATN
Trigger: GTTTGTTGCCACTGAGAAGCAGGCGGGTTGGGTGGG...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACCGCGGACGCCCACCCTaGTGGCCTAACCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYRGRPP*WPNQDL
Trigger: CAGGTCCTGGTTAGGCCACCAGGGTGGGCGTCCGCG...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTAGACGAACTGCGAGGTaGGGGTGGCGGGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPLTRLHRSAGFQKAWKGRRTAR*GWRGSC
Trigger: GCAAGACCCCCGCCACCCCCACCTCGCAGTTCGTCT...ACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACAGCCAGCTCTGGTTCTaGGGCCCCCAGGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYSQLWF*GPQGGS
Trigger: AGAGCCGCCCTGGGGGCCCCAGAACCAGAGCTGGCT...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGGGCTGGCCTCGTCGTTaGCCAAGGAGAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEGWPRR*PRRNDG
Trigger: CCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCC...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTTATTGCCATTCTGGCTaGCCTCGTCGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSYCHSG*PRRWPR
Trigger: CCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTAGGGGGAGGCGCCGGTaGAGGAGAGTGTGTTTACGA +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSRGRRR*RRVCLR
Trigger: TCGTAAACACACTCTCCTCCACCGGCGCCTCCCCCT...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp CTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAAACTCACTGACCTATTaGACTGACGCTGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVVGQGEMMGKELGRLLPNSLTY*TDAGVV
Trigger: TACCACCCCAGCGTCAGTCCAATAGGTCAGTGAGTT...TGGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp CTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAACCAGAATCCCTTCATaGGAGGGATGGATGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LVVGQGEMMGKELGRLLPTRIPS*EGWMPV
Trigger: AACAGGCATCCATCCCTCCCATGAAGGGATTCTGGT...TGGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGCAAACCCGTGGCTGTaGTTTCCACAAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: AILAGLVVGQGEMMGKELANPWL*FPQDNL
Trigger: CAGGTTGTCTTGTGGAAACCACAGCCACGGGTTTGC...GAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCCACTTCGAGAAGACCTaGAATGTGGTGTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: RQPGSVLSHPASNSALTSHFEKT*NVVSIP
Trigger: GGGAATGGACACCACATTTCAGGTCTTCTCGAAGTG...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCGACGTTATTTATGGGTaGGCAAGAATGTTCATTAGA +
Preference number: 4 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAADVIYG*ARMFIR
Trigger: TCTAATGAACATTCTTGCTCACCCATAAATAACGTC...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCCCATTCGAGGGGACTTaGGTCCCAGAGGAATTGCCC +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLPFEGT*VPEELP
Trigger: GGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGG...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCGGACAAGCCCCTTCCTaGCACTTTCTCTTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLGQAPS*HFLLER
Trigger: GCGCTCCAAGAGAAAGTGCCAGGAAGGGGCTTGTCC...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp TGTATTCGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATCCAGACTCCACGTaGGGCTGGAACCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CIRSPYCHSGWPRRWPRRNPDST*GWNPVP
Trigger: TGGGACTGGGTTCCAGCCCCACGTGGAGTCTGGATT...TCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCCTTGGCTCGGGAAAGTaGCCACCCTTTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLLGSGK*PPFLSP
Trigger: GGGAGAGAGAAAGGGTGGCCACTTTCCCGAGCCAAG...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp TGTATTCGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGACTGAACACAGACACCTaGACCTTCCTGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CIRSPYCHSGWPRRWPRRLNTDT*TFLPAG
Trigger: GCCAGCTGGCAGGAAGGTCCAGGTGTCTGTGTTCAG...TCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCTTTAGAACAGAATTCTaGGTACTCGGAGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: SSVACSQLLSPNFLPACGFRTEF*VLGGKP
Trigger: AGGTTTTCCTCCGAGTACCCAGAATTCTGTTCTAAA...GCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCGCAGCACAGGACGTaGCCAGCACCTGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLPQHRT*PAPGTR
Trigger: TCGAGTCCCAGGTGCTGGCCACGTCCTGTGCTGCGG...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAATGGTTCCATTGTCTaGGAACTGAAACCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPNGSIV*ELKPSM
Trigger: CATGGAGGGTTTCAGTTCCCAGACAATGGAACCATT...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp CCTGTCTCTCTGCTGCTGGGACCCAGGGCTTTTTCAGCTGCAGAACCCACTGGAGGACTGACGCTGGGGTaGTATCTTCATCAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PVSLLLGPRAFSAAEPTGGLTLG*YLHQSY
Trigger: ATAGCTCTGATGAAGATACCACCCCAGCGTCAGTCC...TCCAGTGGGTTCTGCAGCTGAAAAAGCCCTGGGTCCCAGCAGCAGAGAGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TGTATTCGGAGTCCTTATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGACTCAACACACACCCCTaGGTCAGACGTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CIRSPYCHSGWPRRWPRRLNTHP*VRRSGR
Trigger: CCTCCCAGAACGTCTGACCCAGGGGTGTGTGTTGAG...TCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GCTCCTCAACACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTTTCCACAAGACAACCTaGCTCTGTGCTGTCACACCC +
Preference number: 4 (lower is better)
Translates to: APQHTPLGQTFWEGIGSIFHKTT*LCAVTP
Trigger: GGGTGTGACAGCACAGAGCCAGGTTGTCTTGTGGAA...AATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTGTTGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCTTGGTGACTGAGAAATaGAAACCACACCTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPLVTEK*KPHLRR
Trigger: TCTTCGAAGGTGTGGTTTTCATTTCTCAGTCACCAA...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp GCTCCTCAACACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCCACCCTGGCGCTTTaGTTTCCAGTTTGGGAAATT +
Preference number: 4 (lower is better)
Translates to: APQHTPLGQTFWEGIGSIPTLAL*FPVWEI
Trigger: AATTTCCCAAACTGGAAATCAAAGCGCCAGGGTGGG...AATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTGTTGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAAACTGACCTATTGGACTaGCGCTGGGGTGGTATCTTC +
Preference number: 4 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKTDLLD*RWGGIF
Trigger: GAAGATACCACCCCAGCGTCAGTCCAATAGGTCAGT...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTCATCCCCCAGAGCTGTaGTGTTTGATGCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSHPPEL*CLMPLP
Trigger: GGGCAATGGCATCAAACAGCACAGCTCTGGGGGATG...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCATGATGCTGCGGCGCTaGTTAACGAACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLMMLRR*LTNSKA
Trigger: GGCCTTCGAGTTCGTTAAGCAGCGCCGCAGCATCAT...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACAAGCTGAAGACGAACTaGGAGGTGGGGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYKLKTN*EVGVAG
Trigger: CCCCGCCACCCCCACCTCGCAGTTCGTCTTCAGCTT...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCAAGCTGAAGACGAACTaGGAGGTGGGGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KGTSTQNQALLGNLSSHPKLKTN*EVGVAG
Trigger: CCCCGCCACCCCCACCTCGCAGTTCGTCTTCAGCTT...GGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTGCAGGTAGGGCAGGCTaGTGGGGGCCGAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALAGRAG*WGPSAR
Trigger: GCGTGCACTCGGCCCCCAGCAGCCTGCCCTACCTGC...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTGGCCCGTCCTACCCTTaGTGGGAGCCAGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RDKYTEPGTSGKLVFSSLGPSYP*WEPALV
Trigger: AACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCC...AAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTCGCCTGCTCCCAGCTaGTCAGTCCCAACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKSPAPS*SVPTFC
Trigger: GCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGA...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGTCCTGTCTCTCTGCTaGTGGGACCCAGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSVLSLC*WDPGLF
Trigger: AAAAAGCCCTGGGTCCCAGCAGCAGAGAGACAGGAC...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GGAGGGAATAGGCAGCATTCCTCACTCTACAGAACACCCAATGAGCATCCTGTCGACAACCTGGCTCTGTaGTGTCACACCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGNRQHSSLYRTPNEHPVDNLAL*CHTQPP
Trigger: TGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTC...GACAGGATGCTCATTGGGTGTTCTGTAGAGTGAGGAATGCTGCCTATTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTAAAAGCCTGGAAGGGTaGTCCACTCAGGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVKSLEG*STQELP
Trigger: TGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTTTT...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGAGCTGGTCCCGGGTTTaGACGCCAGCGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLSWSRV*TPAKEG
Trigger: GCCTTCCTTCGCTGGCGTCCAAACCCGGGACCAGCT...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACGAACCGGGGGTGGGATaGCTGCCAGGGCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYEPGVG*LPGPWF
Trigger: AAACCAAGGCCCTGGCAGCCATCCCACCCCCGGTTC...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CGGGACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCGGCTGGCCTCGTCGTTaGCCAAGGAGAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: RDHGFTTTGLVDGQFPISGWPRR*PRRNDG
Trigger: CCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCC...GGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCTATTGCCATTCTGGCTaGCCTCGTCGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLYCHSG*PRRWPR
Trigger: CCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTTCCTTATTGCCATTCTaGCTGGCCTCGTCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSSLLPF*LASSLA
Trigger: GGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGA...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTTCTCAAGATGAGCCTTaGCAACATAGTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPASQDEP*QHSEML
Trigger: CAGCATCTCACTATGTTGCCAAGGCTCATCTTGAGA...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCAGGGAGAGAGAGTACTaGTGGGGAAGCGGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: THKPNQGLPWLLRQPLLLREREY*WGSGVQ
Trigger: TTGAACCCCGCTTCCCCACCAGTACTCTCTCTCCCT...GAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 72 bp CCTGCTCTTCAGCCTAATACTGCTCTGTGGGAAAACTaGGTCCATTTCCCCCAGGGCTCCTCAACACACACC +
Preference number: 4 (lower is better)
Translates to: PALQPNTALWEN*VHFPQGSSTHT
Trigger: GGTGTGTGTTGAGGAGCCCTGGGGGAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGGCTGAAGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGACAACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCCTCCATGCTTCACCCTaGACTGTTATTTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQPGSVLSHPASNSALTSLHASP*TVISRG
Trigger: TCCTCTAGAAATAACAGTTCAGGGTGAAGCATGGAG...GGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAAGGAATCCAGCGTGGATaGGCAACTGAACAAAATGGC +
Preference number: 4 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKGIQRG*ATEQNG
Trigger: GCCATTTTGTTCAGTTGCTCATCCACGCTGGATTCC...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTTATCTTCCACTGGGATaGACTTGTACTGATAGTGTC +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAYLPLG*TCTDSV
Trigger: GACACTATCAGTACAAGTGCATCCCAGTGGAAGATA...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AAAGTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGTCGCCTGCTCCCAGCTaGTCAGTCCCAACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: KVKLTHKPNQGLPWLLRQSPAPS*SVPTFC
Trigger: GCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGA...CTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGATTCGGAGTCCTTATTaGCATTCTGGCTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEIRSPY*HSGWPR
Trigger: ACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAAT...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTTGCGGCAGCCGTTATTaGTCTAAGTTGGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSCGSRY*SKLECS
Trigger: AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCA...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGACTAAGAAGGGACGCCTaGAGAAGTGGCCGCAAACTT +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGLRRDA*RSGRKL
Trigger: AAGTTTGCGGCCACTTCTGCAGGCGTCCCTTCTTAG...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGAGAAGGGAGGGGGACTaGGCTCATTTGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKRREGD*AHLEEQ
Trigger: TTGCTCCTCCAAATGAGCCCAGTCCCCCTCCCTTCT...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAGTCCTTGGCTGTCATaGGCATTGTATTACATTTGT +
Preference number: 4 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPSPWLS*ALYYIC
Trigger: ACAAATGTAATACAATGCCCATGACAGCCAAGGACT...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTGTGGTTATCTTCCACTaGGATGCACTTGTACTGATA +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAVVIFH*DALVLI
Trigger: TATCAGTACAAGTGCATCCCAGTGGAAGATAACCAC...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGATGTCGGCCTTGTaGTTATCTTCCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVLMSAL*LSSTGM
Trigger: CATCCCAGTGGAAGATAACCACAAGGCCGACATCAG...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp AAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCCCGTCCTACCCTTGCTaGGAGCCAGCTCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KGTSTQNQALLGNLSSHPPSYPC*EPALVL
Trigger: CAGAACCAGAGCTGGCTCCCAGCAAGGGTAGGACGG...GGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGGCTTTCAAAAAGCCTaGAAGGGTGCTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGGFQKA*KGAPLR
Trigger: CCTGAGTGGAGCACCCTTCCAGGCTTTTTGAAAGCC...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CGGGACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCTGTTACAGCGCACGTTaGCCGAACCTAGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: RDHGFTTTGLVDGQFPISCYSAR*PNLGCS
Trigger: GCTACATCCTAGGTTCGGTCAACGTGCGCTGTAACA...GGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGATTGAGCCCAAGAGCTTaGGATGAGCCTTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGLSPRA*DEPWQH
Trigger: ATGTTGCCAAGGCTCATCTCAAGCTCTTGGGCTCAA...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTAAAGTTGACAATCAATaGGGGTCAATGCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAKVDNQ*GSMLSC
Trigger: ACAGGAAAGCATTGACCCTCATTGATTGTCAACTTT...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AAAGTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGATGATGCTGCGGCGCTaGTTAACGAACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KVKLTHKPNQGLPWLLRQMMLRR*LTNSKA
Trigger: GGCCTTCGAGTTCGTTAAGCAGCGCCGCAGCATCAT...CTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGAACTTTCTGCCCGCATaGGGCCCGTCCTACCCTTGC +
Preference number: 4 (lower is better)
Translates to: NNDNKGTSTQNQALLGNLNFLPA*GPSYPC
Trigger: GCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTT...CAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCATTCGGAGTCCTTATTaGCATTCTGGCTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLIRSPY*HSGWPR
Trigger: ACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAAT...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGTGCGGCAGCCGTTATTaGTCTAAGTTGGAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKECGSRY*SKLECS
Trigger: AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCA...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp AGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTAAGGTCTTCCCTGGCTaGTGCGGCAGCCGTTATTGC +
Preference number: 4 (lower is better)
Translates to: RDKYTEPGTSGKLVFSSLKVFPG*CGSRYC
Trigger: GCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT...AAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTTCAAGGAATTTCTTaGCTCGGGAAAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPFQGIS*LGKVAT
Trigger: GGTGGCCACTTTCCCGAGCCAAGAAATTCCTTGAAA...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGTCCTTCAAAGTGGTTTaGGCAGTCCGAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKESFKVV*AVRGDI
Trigger: AATGTCTCCTCGGACTGCCCAAACCACTTTGAAGGA...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp CAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTTGGACTGGGTCAGACGTTCTaGGAGGGAATAGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: QAWLMANSQSPASSCHVGLGQTF*EGIGSI
Trigger: AATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAG...TCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGGCTCCACAGATCAGCTaGCTTTCAAAAAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEAPQIS*LSKSLE
Trigger: TTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGC...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp GGGCTATTTACACAAGTTACAAGAATTGCGTTGCTGTCTTTAAGAAGTCTCCTCGCTCGTCGTAGACGATaGCCGCCGAGTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLFTQVTRIALLSLRSLLARRRR*PPSRGR
Trigger: CCGGCCTCTACTCGGCGGTCATCGTCTACGACGAGC...GAGGAGACTTCTTAAAGACAGCAACGCAATTCTTGTAACTTGTGTAAATAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTTCATCTGTTGGTGACTaGGAAATGAAAACCACACCT +
Preference number: 4 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSSSVGD*EMKTTP
Trigger: AGGTGTGGTTTTCATTTCTCAGTCACCAACAGATGA...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTTGGCCTACATGCCCATaGACCAGCTTCAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KVFPGCCGSRYCSKLECSWPTCP*TSFKSN
Trigger: ATTGCTTTTGAAGCTGGTTCATGGGCATGTAGGCCA...AGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCCCGAGGTCCTGGAGCTaGCGCTCTAGGGCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VIALSWSVLFAFIMYSESPRSWS*RSRAVP
Trigger: GGGGACCGCCCTAGAGCGGCAGCTCCAGGACCTCGG...GGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp AAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCCCTGGCACTTTCTCTTaGAGCGCTTTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGTSTQNQALLGNLSSHPPGTFS*SALGRR
Trigger: CCTTCTCCCCAAAGCGCTCCAAGAGAAAGTGCCAGG...GGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGCCTTCATGGGAGGGATaGATGCCTGTTGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKPSWEG*MPVETH
Trigger: GTGAGTTTCAACAGGCATCCATCCCTCCCATGAAGG...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GGAGGGAATAGGCAGCATTCCTCACTCTACAGAACACCCAATGAGCATCCTGTCGACATCCAAAAAGCATaGCAGTTTCCCAAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GGNRQHSSLYRTPNEHPVDIQKA*QFPKLG
Trigger: GCCGAGCTTGGGAAACTGCCATGCTTTTTGGATGTC...GACAGGATGCTCATTGGGTGTTCTGTAGAGTGAGGAATGCTGCCTATTCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTCCGGCTCCTCCGCACTaGACAGTTTTGTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: RDKYTEPGTSGKLVFSSLPAPPH*TVLLCF
Trigger: AAAGCACAACAAAACTGTTCAGTGCGGAGGAGCCGG...AAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTGGTTCATCAGCCTTTTaGGCACACTGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SPLTRLHRSAGFQKAWKGGSSAF*AHCSPS
Trigger: AGATGGACTGCAGTGTGCTCAAAAGGCTGATGAACC...ACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTGGTGGGAGGATCTCTTaGGCCCAAGAGCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLGGRIS*AQELEM
Trigger: CATCTCAAGCTCTTGGGCTCAAGAGATCCTCCCACC...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGACAAACTGGCTTCCGTTaGAGTGAACTTTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGQTGFR*SELFFP
Trigger: TGGGAAGAAAAGTTCACTCCAACGGAAGCCAGTTTG...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp GACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCACGATAGATTCAAAATaGCGCCTGCGTGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: DHGFTTTGLVDGQFPISSTIDSK*RLRAHD
Trigger: GTCATGGGCACGCAGGCGCCATTTTGAATCTATCGT...GCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCAGCTGCAGAACCCACTaGACTTCCAGGAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: DHGFTTTGLVDGQFPISSSCRTH*TSRNQG
Trigger: TCCTTGATTCCTGGAAGTCCAGTGGGTTCTGCAGCT...GCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTGCATCCTGTCTTTCATaGCTAATACCAAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: ILAGLVVGQGEMMGKELGASCLS*LIPKLT
Trigger: TGTCAACTTTGGTATTAGCCATGAAAGACAGGATGC...ACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCAATTGGAAAACTCTCTaGAATCCAGCGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: THKPNQGLPWLLRQPLLLNWKTL*NPAWMS
Trigger: GCTCATCCACGCTGGATTCCAGAGAGTTTTCCAATT...GAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACGAGAGAGAGTACTGGTaGGGAAGCGGGGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYEREYW*GSGVQR
Trigger: TCTTTGAACCCCGCTTCCCCACCAGTACTCTCTCTC...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 72 bp ATTCCAATGCGGGACCATGGCTTTACTACTACAGGCTaGGTTGATGGCCAATTCCCAATCTCCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IPMRDHGFTTTG*VDGQFPISSLF
Trigger: GAAGAGGCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTCCCGCATTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp CATTACAGAAACTTCCCATCACCAGAATCCCTTCATGGGAGGGATGGATGCCTGTTGGTGAAGTCAGGATaGATGATGCCGTCACAGGTT +
Preference number: 4 (lower is better)
Translates to: HYRNFPSPESLHGRDGCLLVKSG*MMPSQV
Trigger: AACCTGTGACGGCATCATTCATCCTGACTTCACCAA...CAGGCATCCATCCCTCCCATGAAGGGATTCTGGTGATGGGAAGTTTCTGTAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTCCTGTTGAAACTCACTaGCCTATTGGACTGACGCTG +
Preference number: 4 (lower is better)
Translates to: RDKYTEPGTSGKLVFSSLPVETH*PIGLTL
Trigger: CAGCGTCAGTCCAATAGGTCAGTGAGTTTCAACAGG...AAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGATCCTCCATCTTTATTaGTGGACAAGACAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLILHLY*WTRQSQ
Trigger: TTGAGACTGTCTTGTCCATCAATAAAGATGGAGGAT...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTGGGCTCGAACTGGTTTaGAGTCTCTCCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALGLELV*SLSQSS
Trigger: GGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCC...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGATATCTTCCACTGGGATaGACTTGTACTGATAGTGTC +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGYLPLG*TCTDSV
Trigger: GACACTATCAGTACAAGTGCATCCCAGTGGAAGATA...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR GCA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGAACTGCCTTGACATCTaGATGCTACGGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLNCLDI*MLRCSA
Trigger: AGCTGAGCACCGTAGCATGCAGATGTCAAGGCAGTT...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTTTGTCCTGTCTAGGATaGCAGATGAGAAAGAGTATC +
Preference number: 4 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPLSCLG*QMRKSI
Trigger: GATACTCTTTCTCATCTGGCATCCTAGACAGGACAA...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGCAGGGCTTTTTCAGCTaGAGAACCCACTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NNDNKGTSTQNQALLGNLQGFFS*RTHWTS
Trigger: GGAAGTCCAGTGGGTTCTGCAGCTGAAAAAGCCCTG...CAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TTCTATAAAAATGGAATCTGTTCTGCAGGTTACCGTCCCTCCCCGCCCAAGCATAAATGGAATCTGTTCTaGAGGTTACCGTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FYKNGICSAGYRPSPPKHKWNLF*RLPSLP
Trigger: GGGGAGGGACGGTAACCTGCAGAACAGATTCCATTT...ATGCTTGGGCGGGGAGGGACGGTAACCTGCAGAACAGATTCCATTTTTATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGCTGTGTTCTAGCTaGTCCCGGGTTTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALLLCSS*SRVWTP
Trigger: TGGCGTCCAAACCCGGGACCAGCTAGAACACAGCAG...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGTTTAGAACAGAATTCTaGGTACTCGGAGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEFRTEF*VLGGKP
Trigger: AGGTTTTCCTCCGAGTACCCAGAATTCTGTTCTAAA...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACCTGATGTCGGCCTTGTaGTTATCTTCCACTGGGATG +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYLMSAL*LSSTGM
Trigger: CATCCCAGTGGAAGATAACCACAAGGCCGACATCAG...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGTTTAGTAAAGCTGGTTaGGCACATTTGCTAGGATCT +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKEFSKAG*AHLLGS
Trigger: AGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAA...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp AAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCCCGCCTGCTTCTCAGTaGCAACAAACTCAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGTSTQNQALLGNLSSHPPPASQ*QQTQVA
Trigger: AGCAACTTGAGTTTGTTGCCACTGAGAAGCAGGCGG...GGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTGTCTGGTTTCCCCAATaGCTGGCCTTGCCAAATGAT +
Preference number: 4 (lower is better)
Translates to: RDKYTEPGTSGKLVFSSLVWFPQ*LALPND
Trigger: ATCATTTGGCAAGGCCAGCCATTGGGGAAACCAGAC...AAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGCAACAACCTCTAAGCTaGCACTCCATAACAAGACTG +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKQQPLS*HSITRL
Trigger: CAGTCTTGTTATGGAGTGCCAGCTTAGAGGTTGTTG...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 72 bp CCTTCCTCCCCCTTTAGTAAAGCTGGTTGGGCACATTaGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSSPFSKAGWAH*LGSVGFITSSL
Trigger: AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAAGGGGGAGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
3UTR CAA 72 bp TGGCCAATTCCCAATCTCCAGCCTCTTCCTGTCATGTaGGAGTCAACTATCCTATGTCCCTCTCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: WPIPNLQPLPVM*ESTILCPSLHL
Trigger: AAGATGGAGAGAGGGACATAGGATAGTTGACTCCAACATGACAGGAAGAGGCTGGAGATTGGGAATTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACAAAGGTATGCAATATTaGCATCCCCCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYKGMQY*HPPELC
Trigger: GCACAGCTCTGGGGGATGTCAATATTGCATACCTTT...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTGCGTGGATGAGCAACTaGACAAAATGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLAWMSN*TKWLWE
Trigger: CTCCCAAAGCCATTTTGTTCAGTTGCTCATCCACGC...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp TATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGAAATGGTATCACTCTaGAAGATGGGGCTATTTACA +
Preference number: 4 (lower is better)
Translates to: YCHSGWPRRWPRRNDGEGEMVSL*KMGLFT
Trigger: TGTAAATAGCCCCATCTTTCAGAGTGATACCATTTC...TCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp ATTGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGAGAAACTACCATATTTaGAAGCAGAAAAGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: IAILAGLVVGQGEMMGKERNYHI*KQKSES
Trigger: TGACTCGCTTTTCTGCTTGCAAATATGGTAGTTTCT...CTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp ATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGGCAACAAACTCAAGTTaGTCATCATGCTACCTTGCA +
Preference number: 4 (lower is better)
Translates to: INQTKVFPGCCGSRYCSKATNSS*SSCYLA
Trigger: TGCAAGGTAGCATGATGAGCAACTTGAGTTTGTTGC...CTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGTCACTGATGCTCTCTTaGCCTTCCACACTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLSLMLS*PSTLRE
Trigger: TTCTCGAAGTGTGGAAGGGCAAGAGAGCATCAGTGA...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp ATATCTACAAGACACCATTTACTTCCTAACTGCCTTGACATCTGCATGCTACGGTCCTTATTGCCATTCTaGCTGGCCTCGTCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ISTRHHLLPNCLDICMLRSLLPF*LASSLA
Trigger: GGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGA...CCGTAGCATGCAGATGTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTTTTAGTAAAGCTGGTTaGGCACATTTGCTAGGATCT +
Preference number: 4 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPFSKAG*AHLLGS
Trigger: AGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAA...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTTGTGTTGTCTCTAAATaGTTCCATTGTCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: EFRLSLWWESSLGKQDCFCVVSK*FHCLGT
Trigger: AGTTCCCAGACAATGGAACCATTTAGAGACAACACA...AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TTCTATAAAAATGGAATCTGTTCTGCAGGTTACCGTCCCTCCCCGCCCAAGCATGGTGGGAATCCAGTCTaGGAAAGCAGGACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FYKNGICSAGYRPSPPKHGGNPV*ESRTVL
Trigger: TAAAACAGTCCTGCTTTCCCAGACTGGATTCCCACC...ATGCTTGGGCGGGGAGGGACGGTAACCTGCAGAACAGATTCCATTTTTATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTCTACAGAACACCCAATaGGCATCCTGTCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLLQNTQ*ASCLSW
Trigger: CCATGAAAGACAGGATGCTCATTGGGTGTTCTGTAG...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTTACTACAGGCTTGGTTaGTGGCCAATTCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLYYRLG*WPIPNL
Trigger: GAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTA...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp AACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGCTTTTCTTCCCATCGTaGTTCCTCTTCGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NNDNKGTSTQNQALLGNLLFFPS*FLFVSQ
Trigger: CTGGCTAACGAAGAGGAAGCACGATGGGAAGAAAAG...CAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR GCA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTTTCACTTCAGGTAACTaGCCTAAAATTAAAACCTCC +
Preference number: 4 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPFTSGN*PKIKTS
Trigger: GGAGGTTTTAATTTTAGGGCAGTTACCTGAAGTGAA...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTACAAGTTACAAGAATTaGGTTGCTGTCTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVTSYKN*VAVFKK
Trigger: CTTCTTAAAGACAGCAACGCAATTCTTGTAACTTGT...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 72 bp GTTCTGTTTGCTTTTATTATGTATTCGGAGTCCTTATaGCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLFAFIMYSESL*PFWLASSLAKE
Trigger: CTCCTTGGCCAACGACGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATACATAATAAAAGCAAACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR TCA 90 bp TGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGGGATGGATGCCTGTTaGAACTCACTGACCTATTGG +
Preference number: 4 (lower is better)
Translates to: CCGSRYCSKLECSVCFYYGMDAC*NSLTYW
Trigger: CCAATAGGTCAGTGAGTTTCAACAGGCATCCATCCC...ATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCCACCTAGAATTGGTTaGACTGGTCTAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALPPRIG*TGLGEP
Trigger: AGGCTCTCCTAGACCAGTTCAACCAATTCTAGGTGG...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACGTGGTTATCTTCCACTaGGATGCACTTGTACTGATA +
Preference number: 4 (lower is better)
Translates to: SWLGTFARICGFHHFKPYVVIFH*DALVLI
Trigger: TATCAGTACAAGTGCATCCCAGTGGAAGATAACCAC...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CCA 90 bp GACCATGGCTTTACTACTACAGGCTTGGTTGATGGCCAATTCCCAATCTCCAGCAAGCTTGACTTACTGTaGTCTAAAATTGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: DHGFTTTGLVDGQFPISSKLDLL*SKIASV
Trigger: CACCGAAGCAATTTTAGACCACAGTAAGTCAAGCTT...GCTGGAGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAAGCCATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTTGTAATATGGCATATTaGTCACAGACGATAGACAAG +
Preference number: 4 (lower is better)
Translates to: SPLTRLHRSAGFQKAWKGCNMAY*SQTIDK
Trigger: CTTGTCTATCGTCTGTGATCAATATGCCATATTACA...ACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCCATTTACTTCCTAACTaGCTTGACATCTGCATGCTA +
Preference number: 4 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAHLLPN*LDICML
Trigger: TAGCATGCAGATGTCAAGGCAGTTAGGAAGTAAATG...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATACTAAGGATTCAAAATaGCACCCACGTGCCGACGAT +
Preference number: 4 (lower is better)
Translates to: CCGSRYCSKLECSVCFYYTKDSK*HPRADD
Trigger: ATCGTCGGCACGTGGGTGCCATTTTGAATCCTTAGT...ATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCCCAGTGGCAAACCCGTaGCTGTGGTTTCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: VIALSWSVLFAFIMYSESPVANP*LWFPQD
Trigger: GTCTTGTGGAAACCACAGCCACGGGTTTGCCACTGG...GGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp GTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCTCCTCCTGGGCGATCTaGTATGTTCAGCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: VIALSWSVLFAFIMYSESSSWAI*YVQQTG
Trigger: GCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGA...GGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR TCA 90 bp AAAGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTTTATTCATCTGTTGGTaGCTGAGAAATGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: KAGWAHLLGSVGFITSSLLFICW*LRNENH
Trigger: GTGGTTTTCATTTCTCAGTCACCAACAGATGAATAA...AAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR TCA 90 bp AACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGCGGTGCTCAGCTGTTTaGCATCAACATAAATATATT +
Preference number: 4 (lower is better)
Translates to: NNDNKGTSTQNQALLGNLRCSAV*HQHKYI
Trigger: AATATATTTATGTTGATGTCAAACAGCTGAGCACCG...CAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR GCA 90 bp TGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATCTCATCATGCTACCTTaGACATATCTACAAGACACC +
Preference number: 4 (lower is better)
Translates to: CCGSRYCSKLECSVCFYYLIMLP*TYLQDT
Trigger: GGTGTCTTGTAGATATGTGCAAGGTAGCATGATGAG...ATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTCCTAATACTGCTCTGTaGGAAAACTTGGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALPNTAL*ENLVHF
Trigger: GAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGG...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
3UTR CAA 72 bp CAGTGGCAACAAACTCAAGTTGCTCATCATGCTACCTaGCACATATCTACAAGACACCATTTACTTCCTAAC +
Preference number: 4 (lower is better)
Translates to: QWQQTQVAHHAT*HISTRHHLLPN
Trigger: GTTAGGAAGTAAATGGTGTCTTGTAGATATGTGCAAGGTAGCATGATGAGCAACTTGAGTTTGTTGCCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp TCAAAAGCAATTCACATTGGTCATGATGACACACACCTGCAGTCCCAGCTACTCTATCACTCTGAAAGATaGGGCTATTTACACAAGTTA +
Preference number: 4 (lower is better)
Translates to: SKAIHIGHDDTHLQSQLLYHSER*GYLHKL
Trigger: TAACTTGTGTAAATAGCCCCATCTTTCAGAGTGATA...GAGTAGCTGGGACTGCAGGTGTGTGTCATCATGACCAATGTGAATTGCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CCA 90 bp GTTATTGCTCTAAGTTGGAGTGTTCTGTTTGCTTTTATTATGTATTCGGAGTCCCTCTTCCTGTCATGTTaGAGTCAACTATCCTATGTC +
Preference number: 4 (lower is better)
Translates to: VIALSWSVLFAFIMYSESLFLSC*SQLSYV
Trigger: GACATAGGATAGTTGACTCCAACATGACAGGAAGAG...GGACTCCGAATACATAATAAAAGCAAACAGAACACTCCAACTTAGAGCAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp GCAGCAGGCACTTGCCGCCGCTCGGCAGCCCCAGGGTGCCGTGGCTaGCGCTGCCGCCCGCGCCGCCGCCATTCTCGTCCCGGTTCATCA +
Preference number: 5 (lower is better)
Translates to: AAGTCRRSAAPGCRG*RCRPRRRHSRPGSS
Trigger: TGATGAACCGGGACGAGAATGGCGGCGGCGCGGGCGGCAGCGGCAGCCACGGCACCCTGGGGCTGCCGAGCGGCGGCAAGTGCCTGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp TGCGCTCGGCGTTGCGGCGCAGCGCCTGCACCACCAGCGACACGGTaGTGTCCTCGCGGAGGCTCTCGGCGCGCGGGCTGCGCTCGTCGT +
Preference number: 5 (lower is better)
Translates to: CARRCGAAPAPPATR*CPRGGSRRAGCARR
Trigger: ACGACGAGCGCAGCCCGCGCGCCGAGAGCCTCCGCGAGGACAGCACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAACGCCGAGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS TCA 90 bp CCTCGCGGAGGCTCTCGGCGCGCGGGCTGCGCTCGTCGTAGACGATaGCCGCCGAGTAGAGGCCGGAGCGCAAGCGGGCGCGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: PRGGSRRAGCARRRR*PPSRGRSASGRVPP
Trigger: AGGAGGTACGCGCCCGCTTGCGCTCCGGCCTCTACTCGGCGGTCATCGTCTACGACGAGCGCAGCCCGCGCGCCGAGAGCCTCCGCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp TATTTTTGCCGGTCGCGCGGCTCCTGTCGCCACTGGCGCCAGCGCTaGCCTGCCTACGCTCCTCCGGCGCTCAGCGCACTGCCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: YFCRSRGSCRHWRQR*PAYAPPALSALPQP
Trigger: TGGCTGGGGCAGTGCGCTGAGCGCCGGAGGAGCGTAGGCAGGGCAGCGCTGGCGCCAGTGGCGACAGGAGCCGCGCGACCGGCAAAAATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp TTGAGCAGGCAGATGTCGGTGCGCTCGGCGTTGCGGCGCAGCGCCTaGACCACCAGCGACACGGTGCTGTCCTCGCGGAGGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LSRQMSVRSALRRSA*TTSDTVLSSRRLSA
Trigger: CGCCGAGAGCCTCCGCGAGGACAGCACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAACGCCGAGCGCACCGACATCTGCCTGCTCAA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 90 bp TCAAACAATGGCGCGGACGCCCACCCTGGTGGCCTAACCAGGACCTaGCCCCGCTCAGCCGCCAGGCCTTCCGGGACAAGCCCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SNNGADAHPGGLTRT*PRSAARPSGTSPFL
Trigger: CAGGAAGGGGCTTGTCCCGGAAGGCCTGGCGGCTGAGCGGGGCCAGGTCCTGGTTAGGCCACCAGGGTGGGCGTCCGCGCCATTGTTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGGCCCGTCCTACCCTaGCTGGGAGCCAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAARPVLP*LGASSG
Trigger: ACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCCG...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCGGCCCGTCCTACCCTaGCTGGGAGCCAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PAPSCSVPTFCPHAARPTRPVLP*LGASSG
Trigger: ACCAGAGCTGGCTCCCAGCAAGGGTAGGACGGGCCG...GGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCTCCAGCAGCAGGCACTaGCCGCCGCTCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPSSSRH*PPLGSP
Trigger: GGGGCTGCCGAGCGGCGGCAAGTGCCTGCTGCTGGA...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GCCATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCTCGGTGCGCTCGGCGTaGCGGCGCAGCGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: AILAGLVVGQGEMMGKELSVRSA*RRSACT
Trigger: GGTGCAGGCGCTGCGCCGCAACGCCGAGCGCACCGA...GAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 90 bp GGAATTGCCCTCATCTCTCCCACCAGCGCCGACAAGCTCAAACAATaGCGCGGACGCCCACCCTGGTGGCCTAACCAGGACCTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: GIALISPTSADKLKQ*RGRPPWWPNQDLAP
Trigger: CGGGGCCAGGTCCTGGTTAGGCCACCAGGGTGGGCGTCCGCGCCATTGTTTGAGCTTGTCGGCGCTGGTGGGAGAGATGAGGGCAATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 90 bp CCGGCCAGCCCCGGCCATTCGAGGGGACTTGCGTCCCAGAGGAATTaGCCTCATCTCTCCCACCAGCGCCGACAAGCTCAAACAATGGCG +
Preference number: 5 (lower is better)
Translates to: PASPGHSRGLASQRN*PHLSHQRRQAQTMA
Trigger: CGCCATTGTTTGAGCTTGTCGGCGCTGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGGGCTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 90 bp CGGGCGAGAGCTAAGAAGGGACGCCTGCAGAAGTGGCCGCAAACTTaGTCCTCAAGGGCTCCCGCGGGAGAGCCTCTTCTTCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: RARAKKGRLQKWPQT*SSRAPAGEPLLPCP
Trigger: GGGACAGGGAAGAAGAGGCTCTCCCGCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTTCTGCAGGCGTCCCTTCTTAGCTCTCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 90 bp TGCAGAAAGGGGCGGGCGAGAGCTAAGAAGGGACGCCTGCAGAAGTaGCCGCAAACTTGGTCCTCAAGGGCTCCCGCGGGAGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: CRKGRARAKKGRLQK*PQTWSSRAPAGEPL
Trigger: AAGAGGCTCTCCCGCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTTCTGCAGGCGTCCCTTCTTAGCTCTCGCCCGCCCCTTTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GAAGGAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGGGGCTCGAACTGGTTaGCAGTCTCTCCCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: EGARSPAPSCSVPTFCPHGARTG*QSLPVL
Trigger: GAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCCC...ATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTATTCGGAGTCCTTATaGCCATTCTGGCTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SVACSQLLSPNFLPACGPYSESL*PFWLAS
Trigger: CGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATA...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGGCTGGTTGGGCACATTaGCTAGGATCTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SVACSQLLSPNFLPACGPAGWAH*LGSVGF
Trigger: GAAACCCACAGATCCTAGCAAATGTGCCCAACCAGC...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS CCA 90 bp TCGCCCAGAATCTCCAGGGCTCTCGAATCGGTCTGGCTGGGGAAATaGAGGAGGTTGGGGAGGGAGGACTCTCAACGGGATTCACGAGGG +
Preference number: 5 (lower is better)
Translates to: SPRISRALESVWLGK*RRLGREDSQRDSRG
Trigger: CCCTCGTGAATCCCGTTGAGAGTCCTCCCTCCCCAACCTCCTCCATTTCCCCAGCCAGACCGATTCGAGAGCCCTGGAGATTCTGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGTCCTGGCACTTTCTCTaGGAGCGCTTTGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGSWHFL*ERFGEK
Trigger: CTTCTCCCCAAAGCGCTCCAAGAGAAAGTGCCAGGA...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCCCAGAGCTGTGCTGTTaGATGCCATTGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPPELCC*MPLPSW
Trigger: CCAGGAGGGCAATGGCATCAAACAGCACAGCTCTGG...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGCTGAACAAAATGGCTTaGGGAGGGAATGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: SVACSQLLSPNFLPACGPLNKMA*GGNDGS
Trigger: GCTCCCATCATTCCCTCCCAAAGCCATTTTGTTCAG...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp AAACAAATCCAGACTCCACGTGGGGCTGGAACCCAGTCCCAGCCCTaGTGTGTTCTAGCTGGTCCCGGGTTTGGACGCCAGCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: KQIQTPRGAGTQSQP*CVLAGPGFGRQRRK
Trigger: CTTCCTTCGCTGGCGTCCAAACCCGGGACCAGCTAGAACACAGCAGGGCTGGGACTGGGTTCCAGCCCCACGTGGAGTCTGGATTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCTTATGCTTCCAGTCCTaGGCTGTCATGGGCATTGTA +
Preference number: 5 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAALCFQS*AVMGIV
Trigger: TACAATGCCCATGACAGCCAAGGACTGGAAGCATAA...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp AGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCCTACCCTTGCTGGGTATTCGGAGTCCTTATaGCCATTCTGGCTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SCSVPTFCPHAARPTLAGYSESL*PFWLAS
Trigger: CGAGGCCAGCCAGAATGGCAATAAGGACTCCGAATA...CCCAGCAAGGGTAGGACGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGGCCTCCCGTGTATTTTaGCCGGTCGCGCGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLASRVF*PVARLL
Trigger: CAGGAGCCGCGCGACCGGCAAAAATACACGGGAGGC...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp AGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCTTTTCAAGGAATTTCTaGGCTCGGGAAAGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SSVACSQLLSPNFLPACGFSRNF*ARESGH
Trigger: GTGGCCACTTTCCCGAGCCAAGAAATTCCTTGAAAA...GCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp TCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCCGTCATGGCTTCCCAAATaGGAAAACTCTCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: SVACSQLLSPNFLPACGPSWLPK*ENSLES
Trigger: GGATTCCAGAGAGTTTTCCAATTTGGGAAGCCATGA...CGGGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS TCA 90 bp CTTGAGACTCTGAACACAGACACCTGGACCTTCCTGCCAGCTGGCTaGCACCTAACGCCATGCTGGGGGCTCGAACTGGTTTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LETLNTDTWTFLPAG*HLTPCWGLELVCSL
Trigger: GAGACTGCAAACCAGTTCGAGCCCCCAGCATGGCGTTAGGTGTCAGCCAGCTGGCAGGAAGGTCCAGGTGTCTGTGTTCAGAGTCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGGCCATTCGAGGGGACTaGCGTCCCAGAGGAATTGCC +
Preference number: 5 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPAIRGD*RPRGIA
Trigger: GGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGC...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGCCTGGCTGTCATGGGCATaGTATTACATTTGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: ARSPAPSCSVPTFCPHAAWLSWA*YYICKQ
Trigger: CTGCTTACAAATGTAATACAATGCCCATGACAGCCA...GGCCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCGCACTTCTGGGAAACTaGTCTTCTCATCCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPALLGN*SSHPFA
Trigger: GGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGC...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp GGAAGCAGGGAGCCTCTGGCTCTTCTAAAAATTGCCAGTGGGAGCTCTGGCCTCGCTCTGTGGGAAAACTaGGTCCATTTCCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSREPLALLKIASGSSGLALWEN*VHFPQG
Trigger: GCCCTGGGGGAAATGGACCAAGTTTTCCCACAGAGC...GAGGCCAGAGCTCCCACTGGCAATTTTTAGAAGAGCCAGAGGCTCCCTGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGTATCCAAACACCGTATaGAGTCCCTTAACAAGGCTC +
Preference number: 5 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRYPNTV*SPLTRL
Trigger: GAGCCTTGTTAAGGGACTCAATACGGTGTTTGGATA...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 90 bp CCATGCTGGGGGCTCGAACTGGTTTGCAGTCTCTCCCAGTCCTCCTaGGCGATCTGCTATGTTCAGCAAACTGGCTTCCGTTGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: PCWGLELVCSLSQSS*AICYVQQTGFRWSE
Trigger: TTCACTCCAACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCCCCAGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCAAAAGGTATGCAATATaGACATCCCCCAGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPKRYAI*TSPRAV
Trigger: CACAGCTCTGGGGGATGTCAATATTGCATACCTTTT...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp AGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTCTGCTGAGCAGTCCATTTTaGTGGGTGGAGCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RSSLAAAAAVIALSWSVLLSSPF*WVEPTS
Trigger: AGAGGTGGGCTCCACCCACAAAAATGGACTGCTCAG...CAGAACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp ATTCTGGCTGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTGCTGGTTGGGCACATTaGCTAGGATCTGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: ILAGLVVGQGEMMGKELGAGWAH*LGSVGF
Trigger: GAAACCCACAGATCCTAGCAAATGTGCCCAACCAGC...ACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCAGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp TGGCCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTTACTTCCTAACTGCCTaGACATCTGCATGCTACGGT +
Preference number: 5 (lower is better)
Translates to: WPRRWPRRNDGEGARSPAYFLTA*TSACYG
Trigger: ACCGTAGCATGCAGATGTCAAGGCAGTTAGGAAGTA...AGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GAGCTCGGTCGCCTGCTCCCAGCTGCTCAGTCCCAACTTTCTGCCCGCATGCGGTGGCTAATACCAAAGTaGACAATCAATGAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: ELGRLLPAAQSQLSARMRWLIPK*TINEGQ
Trigger: TTGACCCTCATTGATTGTCAACTTTGGTATTAGCCA...CCGCATGCGGGCAGAAAGTTGGGACTGAGCAGCTGGGAGCAGGCGACCGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp AAGCCTGGAAGGGTGCTCCACTCAGGAACTCCCAAGAGAAACCATCTTGTCCCTCCAAGAGAAACCATCTaGTCCCTCAGCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KPGRVLHSGTPKRNHLVPPRETI*SLSQAG
Trigger: CCCAGCCTGGCTGAGGGACAAGATGGTTTCTCTTGG...AGGGACAAGATGGTTTCTCTTGGGAGTTCCTGAGTGGAGCACCCTTCCAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS TCA 90 bp CTTAGCAGTTCAACCAAAGGTCAACAGCAGCGTTTCCCCAGCAGCTaGCAGGTCAAATGGGCAGGAAACAACTGCGGGGAACAAAGCCCC +
Preference number: 5 (lower is better)
Translates to: LSSSTKGQQQRFPSS*QVKWAGNNCGEQSP
Trigger: GGGGCTTTGTTCCCCGCAGTTGTTTCCTGCCCATTTGACCTGTCAGCTGCTGGGGAAACGCTGCTGTTGACCTTTGGTTGAACTGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GTGAAACTGACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTGCTGTTTGATGCCATaGCCCTCCTGGGGAACTGAA +
Preference number: 5 (lower is better)
Translates to: VKLTHKPNQGLPWLLRQPCCLMP*PSWGTE
Trigger: TTCAGTTCCCCAGGAGGGCAATGGCATCAAACAGCA...CGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGTCAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CCTCGTCGTTGGCCAAGGAGAAATGATGGGGAAGGAGCTCGGTCGCCTGCTCCCCAGAAACTACCATATTaGCAAGCAGAAAAGCGAGTC +
Preference number: 5 (lower is better)
Translates to: PRRWPRRNDGEGARSPAPQKLPY*QAEKRV
Trigger: GACTCGCTTTTCTGCTTGCAAATATGGTAGTTTCTG...GGGAGCAGGCGACCGAGCTCCTTCCCCATCATTTCTCCTTGGCCAACGACGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 90 bp GGGCTCGAACTGGTTTGCAGTCTCTCCCAGTCCTCCTGGGCGATCTaGTATGTTCAGCAAACTGGCTTCCGTTGGAGTGAACTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLELVCSLSQSSWAI*YVQQTGFRWSELFF
Trigger: GAAGAAAAGTTCACTCCAACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACTTCTCTTGGAGCGCTTaGGGGAGAAGGGAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: SWLGTFARICGFHHFKPYFSWSA*GRREGD
Trigger: GTCCCCCTCCCTTCTCCCCAAAGCGCTCCAAGAGAA...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp GAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTTGTCCTTCAAAGTGGTTaGGGCAGTCCGAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: EFRLSLWWESSLGKQDCFVLQSG*GSPRRH
Trigger: ATGTCTCCTCGGACTGCCCAAACCACTTTGAAGGAC...AAAACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp TCAAAAGCAATTCACATTGGTCATGATGACACACACCTGCAGTCCCAGCTACTCGAAGTGGCCGCAAACTaGGTCCTCAAGGGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SKAIHIGHDDTHLQSQLLEVAAN*VLKGSR
Trigger: GCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTTC...GAGTAGCTGGGACTGCAGGTGTGTGTCATCATGACCAATGTGAATTGCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp CACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTCCTCACTCTGGCAACAAACTCAAGTaGCTCATCATGCTACCTTGC +
Preference number: 5 (lower is better)
Translates to: HTPLGQTFWEGIGSIPHSGNKLK*LIMLPC
Trigger: GCAAGGTAGCATGATGAGCAACTTGAGTTTGTTGCC...AGAGTGAGGAATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 90 bp CAGTCCTCCTGGGCGATCTGCTATGTTCAGCAAACTGGCTTCCGTTaGAGTGAACTTTTCTTCCCATCGTGCTTCCTCTTCGTTAGCCAG +
Preference number: 5 (lower is better)
Translates to: QSSWAICYVQQTGFR*SELFFPSCFLFVSQ
Trigger: CTGGCTAACGAAGAGGAAGCACGATGGGAAGAAAAGTTCACTCCAACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp AAAGGGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTGCGTCCCAGAGGAATaGCCCTCATCTCTCCCACCA +
Preference number: 5 (lower is better)
Translates to: KGTSTQNQALLGNLSSHPCVPEE*PSSLPP
Trigger: TGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCA...GGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTTACTGTGGTCTAAAATaGCTTCGGTGGCCTACATGC +
Preference number: 5 (lower is better)
Translates to: LSSDCPCGGNPVWESRTVYCGLK*LRWPTC
Trigger: GCATGTAGGCCACCGAAGCAATTTTAGACCACAGTA...AACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp CACCTGCTCTTCAGCCTAATACTGCTCTGTGGGAAAACTTGGTCCATTTCCCCCAAAATAGCATGTAGCTaGTTCCCTCCTCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: HLLFSLILLCGKTWSISPKIACS*FPPPSP
Trigger: GGGGGAGGGAGGAGGGAACAAGCTACATGCTATTTT...GGGGGAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGGCTGAAGAGCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 90 bp GTTCAGCAAACTGGCTTCCGTTGGAGTGAACTTTTCTTCCCATCGTaGTTCCTCTTCGTTAGCCAGGAACTGCCTCCCGGTAAGGAAATC +
Preference number: 5 (lower is better)
Translates to: VQQTGFRWSELFFPS*FLFVSQELPPGKEI
Trigger: GATTTCCTTACCGGGAGGCAGTTCCTGGCTAACGAAGAGGAAGCACGATGGGAAGAAAAGTTCACTCCAACGGAAGCCAGTTTGCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS-3UTR CAA 90 bp CACCTGCTCTTCAGCCTAATACTGCTCTGTGGGAAAACTTGGTCCATTTCCCCCGCACTTCTGGGAAACTaGTCTTCTCATCCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: HLLFSLILLCGKTWSISPALLGN*SSHPFA
Trigger: GGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGC...GGGGGAAATGGACCAAGTTTTCCCACAGAGCAGTATTAGGCTGAAGAGCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GCTCCTCAACACACACCCCTGGGTCAGACGTTCTGGGAGGGAATAGGCAGCATTAACGTGACGGTGACATaGAGGCTTGACGTTATTTAT +
Preference number: 5 (lower is better)
Translates to: APQHTPLGQTFWEGIGSINVTVT*RLDVIY
Trigger: ATAAATAACGTCAAGCCTCAATGTCACCGTCACGTT...AATGCTGCCTATTCCCTCCCAGAACGTCTGACCCAGGGGTGTGTGTTGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAACCTCTTCCTGTCATGTaGGAGTCAACTATCCTATGT +
Preference number: 5 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKPLPVM*ESTILC
Trigger: ACATAGGATAGTTGACTCCAACATGACAGGAAGAGG...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACGTCCTTCAAAGTGGTTaGGGCAGTCCGAGGAGACAT +
Preference number: 5 (lower is better)
Translates to: SWLGTFARICGFHHFKPYVLQSG*GSPRRH
Trigger: ATGTCTCCTCGGACTGCCCAAACCACTTTGAAGGAC...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp ACACATAAACCAAACCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCGCTCATCATGCTACCTaGCACATATCTACAAGACAC +
Preference number: 5 (lower is better)
Translates to: THKPNQGLPWLLRQPLLLAHHAT*HISTRH
Trigger: GTGTCTTGTAGATATGTGCAAGGTAGCATGATGAGC...GAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGGTTTGGTTTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp ACCTGGCTCTGTGCTGTCACACCCAGCCTCCAACAGCGCCTTGACATCCAAAAACAAAAGCAATTCACATaGGTCATGATGACACACACC +
Preference number: 5 (lower is better)
Translates to: TWLCAVTPSLQQRLDIQKQKQFT*VMMTHT
Trigger: GGTGTGTGTCATCATGACCAATGTGAATTGCTTTTG...TTTTTGGATGTCAAGGCGCTGTTGGAGGCTGGGTGTGACAGCACAGAGCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp AGCTGGTTGGGCACATTTGCTAGGATCTGTGGGTTTCATCACTTCAAGCCTTACCCCCACCCTGGCGCTTaGATTTCCAGTTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: SWLGTFARICGFHHFKPYPHPGA*ISSLGN
Trigger: ATTTCCCAAACTGGAAATCAAAGCGCCAGGGTGGGG...GTAAGGCTTGAAGTGATGAAACCCACAGATCCTAGCAAATGTGCCCAACCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp CCAAGGTCTTCCCTGGCTGCTGCGGCAGCCGTTATTGCTCTAAGTTGGAGTGTTATTGTGATAGAAGGCTaGAATTCGGAGGAAAGATGT +
Preference number: 5 (lower is better)
Translates to: PRSSLAAAAAVIALSWSVIVIEG*NSEERC
Trigger: ACATCTTTCCTCCGAATTCAAGCCTTCTATCACAAT...AACACTCCAACTTAGAGCAATAACGGCTGCCGCAGCAGCCAGGGAAGACCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCCCTCCCTTCCTCCGTTATTGCTCTAAGTaGGAGTGTTCTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: EPGTSGKLVFSSLCPPFLRYCSK*ECSVCF
Trigger: AAAGCAAACAGAACACTCCAACTTAGAGCAATAACG...GAGGAAGGGAGGGCAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS-3UTR CAA 90 bp CTGAGTTCCGACTGTCCCTGTGGTGGGAATCCAGTCTGGGAAAGCAGGACTGTTAAATGTCCAACTGTGTaGTCTCTAAATGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: LSSDCPCGGNPVWESRTVKCPTV*SLNGSI
Trigger: AATGGAACCATTTAGAGACAACACAGTTGGACATTT...AACAGTCCTGCTTTCCCAGACTGGATTCCCACCACAGGGACAGTCGGAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp GGACAAGTACACAGAACCAGGCACTTCTGGGAAACTTGTCTTCTCATCCCTTTGCTACTACAGGCTTGGTaGATGGCCAATTCCCAATCT +
Preference number: 5 (lower is better)
Translates to: GQVHRTRHFWETCLLIPLLLQAW*MANSQS
Trigger: AGATTGGGAATTGGCCATCAACCAAGCCTGTAGTAG...CAAAGGGATGAGAAGACAAGTTTCCCAGAAGTGCCTGGTTCTGTGTACTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp AGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCTGGAAGGGTCGTTATTGCTCTAAGTaGGAGTGTTCTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SPLTRLHRSAGFQKAWKGRYCSK*ECSVCF
Trigger: AAAGCAAACAGAACACTCCAACTTAGAGCAATAACG...ACCCTTCCAGGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp ACCGTATTGAGTCCCTTAACAAGGCTCCACAGATCAGCTGGCTTTCAAAAAGCCGCTTTGATTTCCAGTTaGGGAAATTCATACCAATGG +
Preference number: 5 (lower is better)
Translates to: TVLSPLTRLHRSAGFQKAALISS*GNSYQW
Trigger: CCATTGGTATGAATTTCCCAAACTGGAAATCAAAGC...GGCTTTTTGAAAGCCAGCTGATCTGTGGAGCCTTGTTAAGGGACTCAATACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp ATATCTACAAGACACCATTTACTTCCTAACTGCCTTGACATCTGCATGCTACGGTTTACTACTACAGGCTaGGTTGATGGCCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: ISTRHHLLPNCLDICMLRFTTTG*VDGQFP
Trigger: TGGGAATTGGCCATCAACCAAGCCTGTAGTAGTAAA...CCGTAGCATGCAGATGTCAAGGCAGTTAGGAAGTAAATGGTGTCTTGTAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS-3UTR CAA 90 bp TCCTTTAACTACAACAACGACAACAAAGGGACAAGTACACAGAACCAGGCACTTGTTACAAGAATTGCGTaGCTGTCTTTAAGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SFNYNNDNKGTSTQNQALVTRIA*LSLRSL
Trigger: GAGACTTCTTAAAGACAGCAACGCAATTCTTGTAAC...AAGTGCCTGGTTCTGTGTACTTGTCCCTTTGTTGTCGTTGTTGTAGTTAAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp CGGTCGCGCGGCTCCTGTCGCCACTGGCGCCAGCGCTaGCCTGCCTACGCTCCTCCGGCGCTCAGCGCACTG +
Preference number: 6 (lower is better)
Translates to: RSRGSCRHWRQR*PAYAPPALSAL
Trigger: CAGTGCGCTGAGCGCCGGAGGAGCGTAGGCAGGGCAGCGCTGGCGCCAGTGGCGACAGGAGCCGCGCGACCG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp CGTTGCGGCGCAGCGCCTGCACCACCAGCGACACGGTaGTGTCCTCGCGGAGGCTCTCGGCGCGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RCGAAPAPPATR*CPRGGSRRAGC
Trigger: GCAGCCCGCGCGCCGAGAGCCTCCGCGAGGACAGCACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS TCA 72 bp GGCTCTCGGCGCGCGGGCTGCGCTCGTCGTAGACGATaGCCGCCGAGTAGAGGCCGGAGCGCAAGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: GSRRAGCARRRR*PPSRGRSASGR
Trigger: GCGCCCGCTTGCGCTCCGGCCTCTACTCGGCGGTCATCGTCTACGACGAGCGCAGCCCGCGCGCCGAGAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp CAGATGTCGGTGCGCTCGGCGTTGCGGCGCAGCGCCTaGACCACCAGCGACACGGTGCTGTCCTCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: QMSVRSALRRSA*TTSDTVLSSRR
Trigger: CCTCCGCGAGGACAGCACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAACGCCGAGCGCACCGACATCTG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 72 bp GTGGCTGCACCCCCGGAAGCCCAAGGGCCGAGGTCCTaGAGCTGCCGCTCTAGGGCGGTCCCCTCGGGATTT +
Preference number: 6 (lower is better)
Translates to: VAAPPEAQGPRS*SCRSRAVPSGF
Trigger: AAATCCCGAGGGGACCGCCCTAGAGCGGCAGCTCCAGGACCTCGGCCCTTGGGCTTCCGGGGGTGCAGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp TCCATCGTCACCATGGTCGCCGGGAACCGAGGCGGCTaGGCGCGCGAGGAAGAGAAGAGAACCCGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SIVTMVAGNRGG*AREEEKRTRAA
Trigger: GGCGGCCCGGGTTCTCTTCTCTTCCTCGCGCGCCCAGCCGCCTCGGTTCCCGGCGACCATGGTGACGATGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CAA 72 bp CCGCCTTTGAGCAGGCAGATGTCGGTGCGCTCGGCGTaGCGGCGCAGCGCCTGCACCACCAGCGACACGGTG +
Preference number: 6 (lower is better)
Translates to: PPLSRQMSVRSA*RRSACTTSDTV
Trigger: CACCGTGTCGCTGGTGGTGCAGGCGCTGCGCCGCAACGCCGAGCGCACCGACATCTGCCTGCTCAAAGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp GCACCCCCGGAAGCCCAAGGGCCGAGGTCCTGGAGCTaGCGCTCTAGGGCGGTCCCCTCGGGATTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: APPEAQGPRSWS*RSRAVPSGFLP
Trigger: TGGAAGAAATCCCGAGGGGACCGCCCTAGAGCGGCAGCTCCAGGACCTCGGCCCTTGGGCTTCCGGGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GCCGACAAGCTCAAACAATGGCGCGGACGCCCACCCTaGTGGCCTAACCAGGACCTGGCCCCGCTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ADKLKQWRGRPP*WPNQDLAPLSR
Trigger: GCGGCTGAGCGGGGCCAGGTCCTGGTTAGGCCACCAGGGTGGGCGTCCGCGCCATTGTTTGAGCTTGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GTCCCAGCCCTGCTGTGTTCTAGCTGGTCCCGGGTTTaGACGCCAGCGAAGGAAGGCGCGCCCGCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: VPALLCSSWSRV*TPAKEGAPALS
Trigger: GGAGAGCGCGGGCGCGCCTTCCTTCGCTGGCGTCCAAACCCGGGACCAGCTAGAACACAGCAGGGCTGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 72 bp GCGGACTCTTTTCGGCGACGGCCTCCCGTGTATTTTTaGCGGTCGCGCGGCTCCTGTCGCCACTGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: ADSFRRRPPVYF*RSRGSCRHWRQ
Trigger: CTGGCGCCAGTGGCGACAGGAGCCGCGCGACCGGCAAAAATACACGGGAGGCCGTCGCCGAAAAGAGTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CAA 72 bp CGCGGACTCTTTTCGGCGACGGCCTCCCGTGTATTTTaGCCGGTCGCGCGGCTCCTGTCGCCACTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: RGLFSATASRVF*PVARLLSPLAP
Trigger: TGGCGCCAGTGGCGACAGGAGCCGCGCGACCGGCAAAAATACACGGGAGGCCGTCGCCGAAAAGAGTCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp GCGCGAGGAAGAGAAGAGAACCCGGGCCGCCTAGGCTaGAGAAAGGGGCGGGCGAGAGCTAAGAAGGGACGC +
Preference number: 6 (lower is better)
Translates to: ARGREENPGRLG*RKGRARAKKGR
Trigger: GCGTCCCTTCTTAGCTCTCGCCCGCCCCTTTCTGCAGCCTAGGCGGCCCGGGTTCTCTTCTCTTCCTCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 72 bp GGGCGGGCGAGAGCTAAGAAGGGACGCCTGCAGAAGTaGCCGCAAACTTGGTCCTCAAGGGCTCCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: GRARAKKGRLQK*PQTWSSRAPAG
Trigger: TCCCGCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTTCTGCAGGCGTCCCTTCTTAGCTCTCGCCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp CAGACTCCACGTGGGGCTGGAACCCAGTCCCAGCCCTaGTGTGTTCTAGCTGGTCCCGGGTTTGGACGCCAG +
Preference number: 6 (lower is better)
Translates to: QTPRGAGTQSQP*CVLAGPGFGRQ
Trigger: CTGGCGTCCAAACCCGGGACCAGCTAGAACACAGCAGGGCTGGGACTGGGTTCCAGCCCCACGTGGAGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 72 bp GGAACATCCCGGCCAGCCCCGGCCATTCGAGGGGACTaGCGTCCCAGAGGAATTGCCCTCATCTCTCCCACC +
Preference number: 6 (lower is better)
Translates to: GTSRPAPAIRGD*RPRGIALISPT
Trigger: GGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGGGCTGGCCGGGATGTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 90 bp CCCGGCCAGCCCCGGCCATTCGAGGGGACTTGCGTCCCAGAGGAATaGCCCTCATCTCTCCCACCAGCGCCGACAAGCTCAAACAATGGC +
Preference number: 6 (lower is better)
Translates to: PGQPRPFEGTCVPEE*PSSLPPAPTSSNNG
Trigger: GCCATTGTTTGAGCTTGTCGGCGCTGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGGGCTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 72 bp GAACATCCCGGCCAGCCCCGGCCATTCGAGGGGACTTaGGTCCCAGAGGAATTGCCCTCATCTCTCCCACCA +
Preference number: 6 (lower is better)
Translates to: EHPGQPRPFEGT*VPEELPSSLPP
Trigger: TGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGGGCTGGCCGGGATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp CTCATCTCTCCCACCAGCGCCGACAAGCTCAAACAATaGCGCGGACGCCCACCCTGGTGGCCTAACCAGGAC +
Preference number: 6 (lower is better)
Translates to: LISPTSADKLKQ*RGRPPWWPNQD
Trigger: GTCCTGGTTAGGCCACCAGGGTGGGCGTCCGCGCCATTGTTTGAGCTTGTCGGCGCTGGTGGGAGAGATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 72 bp CCCCGGCCATTCGAGGGGACTTGCGTCCCAGAGGAATaGCCCTCATCTCTCCCACCAGCGCCGACAAGCTCA +
Preference number: 6 (lower is better)
Translates to: PRPFEGTCVPEE*PSSLPPAPTSS
Trigger: TGAGCTTGTCGGCGCTGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS TCA 72 bp CGCCGCCGCCATTCTCGTCCCGGTTCATCAGCCTTTTaGGCACACTGCAGTCCATCTCCCGCAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RRRHSRPGSSAF*AHCSPSPAAPP
Trigger: TGGAGGAGCTGCGGGAGATGGACTGCAGTGTGCTCAAAAGGCTGATGAACCGGGACGAGAATGGCGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS GCA 72 bp CCCGGCCATTCGAGGGGACTTGCGTCCCAGAGGAATTaGCCTCATCTCTCCCACCAGCGCCGACAAGCTCAA +
Preference number: 6 (lower is better)
Translates to: PGHSRGLASQRN*PHLSHQRRQAQ
Trigger: TTGAGCTTGTCGGCGCTGGTGGGAGAGATGAGGGCAATTCCTCTGGGACGCAAGTCCCCTCGAATGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GCTAAGAAGGGACGCCTGCAGAAGTGGCCGCAAACTTaGTCCTCAAGGGCTCCCGCGGGAGAGCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: AKKGRLQKWPQT*SSRAPAGEPLL
Trigger: AAGAAGAGGCTCTCCCGCGGGAGCCCTTGAGGACCAAGTTTGCGGCCACTTCTGCAGGCGTCCCTTCTTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CAA 90 bp GCCAGCTGGCTGACACCTAACGCCATGCTGGGGGCTCGAACTGGTTaGCAGTCTCTCCCAGTCCTCCTGGGCGATCTGCTATGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: ASWLTPNAMLGARTG*QSLPVLLGDLLCSA
Trigger: TGCTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCCCCAGCATGGCGTTAGGTGTCAGCCAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GACTCTGAACACAGACACCTGGACCTTCCTGCCAGCTaGCTGACACCTAACGCCATGCTGGGGGCTCGAACT +
Preference number: 6 (lower is better)
Translates to: DSEHRHLDLPAS*LTPNAMLGART
Trigger: AGTTCGAGCCCCCAGCATGGCGTTAGGTGTCAGCCAGCTGGCAGGAAGGTCCAGGTGTCTGTGTTCAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 72 bp CTGACACCTAACGCCATGCTGGGGGCTCGAACTGGTTaGCAGTCTCTCCCAGTCCTCCTGGGCGATCTGCTA +
Preference number: 6 (lower is better)
Translates to: LTPNAMLGARTG*QSLPVLLGDLL
Trigger: TAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCCCCAGCATGGCGTTAGGTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GGGCTCGAACTGGTTTGCAGTCTCTCCCAGTCCTCCTaGGCGATCTGCTATGTTCAGCAAACTGGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: GLELVCSLSQSS*AICYVQQTGFR
Trigger: ACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAGTTCGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 72 bp TCTTCCCATCGTGCTTCCTCTTCGTTAGCCAGGAACTaGCTCCCGGTAAGGAAATCGGCTCTCTGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: SSHRASSSLARN*LPVRKSALWFQ
Trigger: CTGAAACCAGAGAGCCGATTTCCTTACCGGGAGGCAGTTCCTGGCTAACGAAGAGGAAGCACGATGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 72 bp ACTGGCTTCCGTTGGAGTGAACTTTTCTTCCCATCGTaGTTCCTCTTCGTTAGCCAGGAACTGCCTCCCGGT +
Preference number: 6 (lower is better)
Translates to: TGFRWSELFFPS*FLFVSQELPPG
Trigger: ACCGGGAGGCAGTTCCTGGCTAACGAAGAGGAAGCACGATGGGAAGAAAAGTTCACTCCAACGGAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS GCA 72 bp CTGGTTTGCAGTCTCTCCCAGTCCTCCTGGGCGATCTaGTATGTTCAGCAAACTGGCTTCCGTTGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: LVCSLSQSSWAI*YVQQTGFRWSE
Trigger: TTCACTCCAACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCAGGAGGACTGGGAGAGACTGCAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 90 bp GTGGCCACCCTTTCTCTCTCCCTCATTTTTCTGAGCAGTCCATTTTaGTGGGTGGAGCCCACCTCTCCTATAAGCACCCAGGATAAGCCC +
Preference number: 6 (lower is better)
Translates to: VATLSLSLIFLSSPF*WVEPTSPISTQDKP
Trigger: GGGCTTATCCTGGGTGCTTATAGGAGAGGTGGGCTCCACCCACAAAAATGGACTGCTCAGAAAAATGAGGGAGAGAGAAAGGGTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GATGGCTGCCAGGGCCTTGGTTTTAGAACAGAATTCTaGGTACTCGGAGGAAAACCTCTCATAGCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: DGCQGLGFRTEF*VLGGKPLIAAL
Trigger: CAAGGCGGCTATGAGAGGTTTTCCTCCGAGTACCCAGAATTCTGTTCTAAAACCAAGGCCCTGGCAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS TCA 72 bp GTATGCAATATTGACATCCCCCAGAGCTGTGCTGTTTaGTGCCATTGCCCTCCTGGGGAACTGAAGACAGAG +
Preference number: 6 (lower is better)
Translates to: VCNIDIPQSCAV*CHCPPGELKTE
Trigger: CTCTGTCTTCAGTTCCCCAGGAGGGCAATGGCATCAAACAGCACAGCTCTGGGGGATGTCAATATTGCATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GATGGCTGCCAGGGCCTTGGTTTTAGAACAGAATTCTaGGTACTCGGAGGAAAACCTCTCATAGCCGCCTTT +
Preference number: 6 (lower is better)
Translates to: DGCQGLGFRTEF*VLGGKPLIAAF
Trigger: AAAGGCGGCTATGAGAGGTTTTCCTCCGAGTACCCAGAATTCTGTTCTAAAACCAAGGCCCTGGCAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240100.7
CDS CCA 72 bp TGGGCGATCTGCTATGTTCAGCAAACTGGCTTCCGTTaGAGTGAACTTTTCTTCCCATCGTGCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: WAICYVQQTGFR*SELFFPSCFLF
Trigger: GAAGAGGAAGCACGATGGGAAGAAAAGTTCACTCCAACGGAAGCCAGTTTGCTGAACATAGCAGATCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CAA 72 bp CTTTCTCTCTCCCTCATTTTTCTGAGCAGTCCATTTTaGTGGGTGGAGCCCACCTCTCCTATAAGCACCCAG +
Preference number: 6 (lower is better)
Translates to: LSLSLIFLSSPF*WVEPTSPISTQ
Trigger: CTGGGTGCTTATAGGAGAGGTGGGCTCCACCCACAAAAATGGACTGCTCAGAAAAATGAGGGAGAGAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240101.2
CDS CCA 72 bp GATGCACTTGTACTGATAGTGTCCTTCAAAGTGGTTTaGGCAGTCCGAGGAGACATTCAACAGAGCCGTGAT +
Preference number: 6 (lower is better)
Translates to: DALVLIVSFKVV*AVRGDIQQSRD
Trigger: ATCACGGCTCTGTTGAATGTCTCCTCGGACTGCCCAAACCACTTTGAAGGACACTATCAGTACAAGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240100.7
ENST00000240101.2
CDS CAA 72 bp GCATTGTATTACATTTGTAAGCAGAAACTACCATATTaGCAAGCAGAAAAGCGAGTCATTTTCCCTTTAGGT +
Preference number: 6 (lower is better)
Translates to: ALYYICKQKLPY*QAEKRVIFPLG
Trigger: ACCTAAAGGGAAAATGACTCGCTTTTCTGCTTGCAAATATGGTAGTTTCTGCTTACAAATGTAATACAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240101.2