RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DTX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178498

Ensembl transcript IDs: ENST00000337737.8, ENST00000548198.5, ENST00000548478.1, ENST00000548804.5, ENST00000549583.5, ENST00000550300.1, ENST00000550596.5, ENST00000551632.1, ENST00000551835.5

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGAACTGTATCTGATGAACACACACAGCCGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCG +
Preference number: 1 (lower is better)
Translates to: GELYLMNTHSRLHGG*RGAHISPISPPRHP
Trigger: CGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGATACAGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR GCA 90 bp CAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAGTGGGGGATGGGGGAAGGGATTGCC +
Preference number: 1 (lower is better)
Translates to: QSLGGRPLPEGSGSH*IETLGQWGMGEGIA
Trigger: GGCAATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR TCA 90 bp CAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTaGTACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGG +
Preference number: 1 (lower is better)
Translates to: QTAGALAKAMSFSHL*YPSLSAPLAPGSGR
Trigger: CCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
3UTR CCA 90 bp TCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: SHQPNFSSPAPEVQR*SSMWGRLGIKRPSL
Trigger: AAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR GCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGT +
Preference number: 1 (lower is better)
Translates to: ICTRGGENRALEVGL*QKGVAHTALKHLAS
Trigger: ACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CCA 90 bp GAATCAAGAGACCCTCCCTTCCCCACCCTAGGTCCTTTCTCGGCTTaGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGG +
Preference number: 1 (lower is better)
Translates to: ESRDPPFPTLGPFSA*SWSTAHTRKSQGQW
Trigger: CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAGGGAGGGTCTCTTGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 2 (lower is better)
Translates to: GGENRALEVGLCQKGVAHETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 2 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CAA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTaGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTG +
Preference number: 2 (lower is better)
Translates to: RETGSICTRGGENRA*EVGLCQKGVAHTAL
Trigger: CAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR TCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 2 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 2 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTCACCCTCATTCTAGGTaGCTCAGACACCTCCCCACC +
Preference number: 2 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGHPHSR*LRHLPT
Trigger: GGTGGGGAGGTGTCTGAGCCACCTAGAATGAGGGTG...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
3UTR-3UTR GCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 2 (lower is better)
Translates to: RKSQGQWRGRETGSICTRDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 2 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 2 (lower is better)
Translates to: RETGSICTRGGENRALEVETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRPEVQR*SSMWGR
Trigger: CCGCCCCCACATACTGCTCCACCGCTGAACTTCGGG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CAA 90 bp GGAATCAAGAGACCCTCCCTTCCCCACCCTAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATG +
Preference number: 2 (lower is better)
Translates to: GIKRPSLPHPRSFLG*VVEHSTYQKKPRAM
Trigger: CATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAGGGAGGGTCTCTTGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR TCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR GCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR TCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: RKSQGQWRGRETGSICTRWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CCA 90 bp GAGGCAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTGATACTGGGTACCCAAACCTaGGAGCAAAGAGAAATGAGG +
Preference number: 2 (lower is better)
Translates to: EADSRGLGKGDVLQSSVILGTQT*EQREMR
Trigger: CCTCATTTCTCTTTGCTCCCAGGTTTGGGTACCCAG...TATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
3UTR-3UTR GCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR TCA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGGTTGTTAGCTGTTTaGACTTGCTATTATCCCCAT +
Preference number: 2 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVGLLAV*TCYYPH
Trigger: ATGGGGATAATAGCAAGTTCAAACAGCTAACAACCC...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
3UTR-3UTR GCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 2 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAACTGCATTGAAACACTaGGCCAGTGGGGGATGGGGG +
Preference number: 3 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRTALKH*ASGGWG
Trigger: CCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGT...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CCA 72 bp TCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTaGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SPAPEVQRWSSM*GRLGIKRPSLP
Trigger: GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 3 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 3 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR GCA 72 bp GGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAGTGGGGGATGGGGGAA +
Preference number: 3 (lower is better)
Translates to: GGRPLPEGSGSH*IETLGQWGMGE
Trigger: TTCCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR GCA 72 bp CGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCACACTGCATTGAAACAC +
Preference number: 3 (lower is better)
Translates to: RGGENRALEVGL*QKGVAHTALKH
Trigger: GTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 25 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR TCA 72 bp GGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTaGTACCCTTCGCTCTCAGCTCCTCTTGCACCCGGG +
Preference number: 3 (lower is better)
Translates to: GALAKAMSFSHL*YPSLSAPLAPG
Trigger: CCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
3UTR TCA 72 bp TATCTGATGAACACACACAGCCGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGCCCAATTTCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: YLMNTHSRLHGG*RGAHISPISPP
Trigger: GGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CCA 72 bp CCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGA +
Preference number: 3 (lower is better)
Translates to: PNFSSPAPEVQR*SSMWGRLGIKR
Trigger: TCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CCA 72 bp CCCTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTaGAGCACAGCACATACCAGAAAAAGCCAAGGGCAA +
Preference number: 3 (lower is better)
Translates to: PFPTLGPFSAWS*STAHTRKSQGQ
Trigger: TTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR-3UTR CAA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGTTAGCTGTTTGAACTaGCTATTATCCCCATGCTCA +
Preference number: 3 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVVSCLN*LLSPCS
Trigger: TGAGCATGGGGATAATAGCAAGTTCAAACAGCTAAC...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR GCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAGGGCAGAAGTGGGGCTaGTCGGAGAGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRGQKWG*SERGWA
Trigger: GGCCCACCCCCTCTCCGAGCAGCCCCACTTCTGCCC...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCTGCTCGGAGAGGGGGTaGGCCTGCGCGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLCSERG*ACAVHL
Trigger: GAGATGCACCGCGCAGGCCCACCCCCTCTCCGAGCA...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCCCTGCAGAGCCCGGGTaGTGCAGCCCTCGCAGAATG +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLPAEPG*CSPRRM
Trigger: CATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGG...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGGGGCAGAAGTGGGGCTaGTCGGAGAGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRGQKWG*SERGWA
Trigger: GGCCCACCCCCTCTCCGAGCAGCCCCACTTCTGCCC...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACGGGTGTTCAGCCCCCTaGACACCGGGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHGCSAP*TPGGKT
Trigger: CGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCC...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACATCCCCACCGCCGGGTaGGGGTGCATGTCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHIPTAG*GCMSAR
Trigger: TCGGGCCGACATGCACCCCCACCCGGCGGTGGGGAT...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGGCACAGCCCGGATaGGCAAGGGTCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVEAQPG*ARVPGG
Trigger: GCCCCCAGGGACCCTTGCCCATCCGGGCTGTGCCTC...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCGGTGGGCCTGCGCGGTaGATCTCAGGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLGGPAR*ISGCSP
Trigger: AGGGGAGCACCCTGAGATGCACCGCGCAGGCCCACC...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACGGTGGGCCTGCGCGGTaGATCTCAGGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHGGPAR*ISGCSP
Trigger: AGGGGAGCACCCTGAGATGCACCGCGCAGGCCCACC...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACGAGAGGGGGTGGGCCTaGGCGGTGCATCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHERGWA*AVHLRV
Trigger: CACCCTGAGATGCACCGCGCAGGCCCACCCCCTCTC...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCGGGCAGAAGTGGGGCTaGTCGGAGAGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPGQKWG*SERGWA
Trigger: GGCCCACCCCCTCTCCGAGCAGCCCCACTTCTGCCC...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCGCTCTCCTGCTCTTCTaGCTCCTCCCGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLALLLF*LLPKAR
Trigger: CCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGC...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHPGQPG*GLFAQE
Trigger: TTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGG...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCCCTGCAGAGCCCGGGTaGTGCAGCCCTCGCAGAATG +
Preference number: 4 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFPAEPG*CSPRRM
Trigger: CATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGG...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGC +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQRLHGG*RGAHIS
Trigger: GCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCG...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGC +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPRLHGG*RGAHIS
Trigger: GCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGCCTGGGGGCATCCACTaGAGCAGCTCCCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQPGGIH*SSSRPP
Trigger: GGGAGGGCGGGAGCTGCTTCAGTGGATGCCCCCAGG...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGAGGATGGACACACGGTaGTCCTCCCGAAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRRMDTR*SSRSRA
Trigger: GGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCT...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGAGGATGGACACACGGTaGTCCTCCCGAAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVRMDTR*SSRSRA
Trigger: GGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCT...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGGGGCAGAAGTGGGGCTaGTCGGAGAGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRGQKWG*SERGWA
Trigger: GGCCCACCCCCTCTCCGAGCAGCCCCACTTCTGCCC...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACGGGCAGGTGCTCTCCTaGTCTTCTGCCTCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHGQVLS*SSASSR
Trigger: TCGGGAGGAGGCAGAAGAGCAGGAGAGCACCTGCCC...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRGSAPC*PQGSPG
Trigger: TCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCC...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCGTCAGCTCCCAAGTCTaGCATTTAGGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLVSSQV*HLGRGG
Trigger: CCCGCCCCTCCCTAAATGCCAGACTTGGGAGCTGAC...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHPGQPG*GLFAQE
Trigger: TTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGG...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGTGCTCGGAGAGGGGGTaGGCCTGCGCGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQCSERG*ACAVHL
Trigger: GAGATGCACCGCGCAGGCCCACCCCCTCTCCGAGCA...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCACGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGC +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPRLHGG*RGAHIS
Trigger: GCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCG...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCAGGGTGCTAGAAAGATaGTCGGCCGGGCACGGAGCG +
Preference number: 4 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFRVLER*SAGHGA
Trigger: CGCTCCGTGCCCGGCCGATCATCTTTCTAGCACCCT...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTAGGATGGACACACGGTaGTCCTCCCGAAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCRMDTR*SSRSRA
Trigger: GGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCT...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGGGTGGGCCTGCGCGGTaGATCTCAGGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQGGPAR*ISGCSP
Trigger: AGGGGAGCACCCTGAGATGCACCGCGCAGGCCCACC...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGGAGAGGGGGTGGGCCTaGGCGGTGCATCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGERGWA*AVHLRV
Trigger: CACCCTGAGATGCACCGCGCAGGCCCACCCCCTCTC...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGGAGAGGGGGTGGGCCTaGGCGGTGCATCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQERGWA*AVHLRV
Trigger: CACCCTGAGATGCACCGCGCAGGCCCACCCCCTCTC...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHAGVPL*SWSCGG
Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWAGVPL*SWSCGG
Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGTGCTCGGAGAGGGGGTaGGCCTGCGCGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQCSERG*ACAVHL
Trigger: GAGATGCACCGCGCAGGCCCACCCCCTCTCCGAGCA...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACTCTCCCCCAGACAGATaGGGCAGGTGCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHSPPDR*GRCSPA
Trigger: AGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGA...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCAGAAGCGGCCGCACATaGGGCAGGCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLRSGRT*GRPFSP
Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGCTTCT...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACAGCATCCGCCCATTCTaGGGCTGGTTGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHSIRPF*GWLPTS
Trigger: GCTGGTGGGCAACCAGCCCCAGAATGGGCGGATGCT...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGGTGTTCAGCCCCCTaGACACCGGGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKGCSAP*TPGGKT
Trigger: CGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCC...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGGGTGTTCAGCCCCCTaGACACCGGGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPGCSAP*TPGGKT
Trigger: CGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCC...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGGGGTGTTCAGCCCCCTaGACACCGGGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQGCSAP*TPGGKT
Trigger: CGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCC...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLVPLCS*SCGGCR
Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGCCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRPEVQR*SSMWGR
Trigger: CCGCCCCCACATACTGCTCCACCGCTGAACTTCGGG...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCCTGCAGAGCCCGGGTaGTGCAGCCCTCGCAGAATG +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGPAEPG*CSPRRM
Trigger: CATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCGAGAGGGGGTGGGCCTaGGCGGTGCATCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGERGWA*AVHLRV
Trigger: CACCCTGAGATGCACCGCGCAGGCCCACCCCCTCTC...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCGGGCAGGTGCTCTCCTaGTCTTCTGCCTCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSGQVLS*SSASSR
Trigger: TCGGGAGGAGGCAGAAGAGCAGGAGAGCACCTGCCC...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGACATTCTGGGGCTGGTTaGCCACCAGCTGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRHSGAG*PPAAHR
Trigger: TCTATGGGCAGCTGGTGGGCAACCAGCCCCAGAATG...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVRPPVW*QDTELL
Trigger: CAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCT...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGGSAPC*PQGSPG
Trigger: TCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCC...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQAGVPL*SWSCGG
Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCTGCTCGGAGAGGGGGTaGGCCTGCGCGGTGCATCTC +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGCSERG*ACAVHL
Trigger: GAGATGCACCGCGCAGGCCCACCCCCTCTCCGAGCA...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTCTCCCCCAGACAGATaGGGCAGGTGCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHSPPDR*GRCSPA
Trigger: AGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGA...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTAGCATCCGCCCATTCTaGGGCTGGTTGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCSIRPF*GWLPTS
Trigger: GCTGGTGGGCAACCAGCCCCAGAATGGGCGGATGCT...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGTGTTCAGCCCCCTaGACACCGGGCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGGCSAP*TPGGKT
Trigger: CGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGCCGAACTCCTGGGTTTaGGTGTTCAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWPNSWV*VFSPLD
Trigger: GTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGG...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLRIPNS*VWVFSP
Trigger: GGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCT...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTC +
Preference number: 4 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFGRPPV*CQDTEL
Trigger: GAGTTCGGTATCCTGGCACCACACGGGTGGCCTACC...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCGGGTACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSGYPNS*GPPVQL
Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCC...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCTCAGAACCCCCGAATaGAGGCCAAGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLLRTPE*RPRLEG
Trigger: ACCCTCCAGCCTTGGCCTCCATTCGGGGGTTCTGAG...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGAGGGGTCGCACAGCTaGGGTCCCCCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGEGSHS*GPPVQL
Trigger: CAGCTGCACAGGGGGACCCCAGCTGTGCGACCCCTC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGCAGGTAGGTGGGGTCTaGGTACCCAAACCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWQVGGV*VPKPGS
Trigger: GCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTG...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVCRSHD*GCCWDD
Trigger: GTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCA...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS-3UTR GCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGGTGGGCCTGCGCGGTaGATCTCAGGGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGGGPAR*ISGCSP
Trigger: AGGGGAGCACCCTGAGATGCACCGCGCAGGCCCACC...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTGCTCTCCTGCTCTTCTaGCTCCTCCCGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPALLLF*LLPKAR
Trigger: CCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGC...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGGGGCAGGTGCTCTCCTaGTCTTCTGCCTCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMGQVLS*SSASSR
Trigger: TCGGGAGGAGGCAGAAGAGCAGGAGAGCACCTGCCC...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPGSAPC*PQGSPG
Trigger: TCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCC...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQAGVPL*SWSCGG
Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGCTGGGGTCCCCCTGTaGAGCTGGTCTTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPAGVPL*SWSCGG
Trigger: TCCACCACAAGACCAGCTGCACAGGGGGACCCCAGC...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGATTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGTCAGCTCCCAAGTCTaGCATTTAGGGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGVSSQV*HLGRGG
Trigger: CCCGCCCCTCCCTAAATGCCAGACTTGGGAGCTGAC...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CCA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTCCGAACTCCTGGGTTTaGGTGTTCAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCPNSWV*VFSPLD
Trigger: GTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGG...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCCGAACTCCTGGGTTTaGGTGTTCAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPPNSWV*VFSPLD
Trigger: GTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GEGRTEPWRSASARREWLQLVLW*MSFQVM
Trigger: CATCACCTGGAACGACATCCACCACAAGACCAGCTG...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHVQLVL*WMSFQV
Trigger: CACCTGGAACGACATCCACCACAAGACCAGCTGCAC...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGGGGTACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQGYPNS*GPPVQL
Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCC...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGGGGTACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQGYPNS*GPPVQL
Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCC...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAGGTCCTTTCTCGGCTTaGTCGTGGAGCACAGCACAT +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRGPFSA*SWSTAH
Trigger: ATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACC...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCATGGGCAAGGGTCCCTaGGGGCATCCACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPMGKGP*GHPLKQ
Trigger: CTGCTTCAGTGGATGCCCCCAGGGACCCTTGCCCAT...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR TCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGAALAE*MPALLQ
Trigger: TTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGC...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGCGGCTCCATGGCGGGTaGCGGGGAGCTCACATCAGC +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRRLHGG*RGAHIS
Trigger: GCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCG...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGACCCAGCACAGGCAGTaGTGTCTGTCAGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQTQHRQ*CLSAPK
Trigger: CTTGGGAGCTGACAGACAGCACTGCCTGTGCTGGGT...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR GCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGGGGCTGGGGTCTCTTTaGTCAGGAAGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQGLGSL*SGSPTR
Trigger: CCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCC...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGGCTCTCCTGCTCTTCTaGCTCCTCCCGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWALLLF*LLPKAR
Trigger: CCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGC...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCAGGCCTTTTTCACCTaGAGAGCCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPQAFFT*RARVMQ
Trigger: CTGCATCACCCGGGCTCTGCAGGTGAAAAAGGCCTG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVGSAPC*PQGSPG
Trigger: TCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCC...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGCGAAAGGTGGGGGATTaGAGGGGGTGCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWRKVGD*RGCRLR
Trigger: CCTCAGCCTGCACCCCCTGCAATCCCCCACCTTTCG...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS-3UTR GCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGCTGTCCCTTCATaGCTCCATCATCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGAAVPS*LHHRPP
Trigger: TGGGGGACGATGATGGAGGCATGAAGGGACAGCTGC...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGACCGCCGGGTGGGGGTaGATGTCGGCCCGATCGCAG +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRTAGWG*MSARSQ
Trigger: CTGCGATCGGGCCGACATGCACCCCCACCCGGCGGT...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCATCTCCCCCAGACAGATaGGGCAGGTGCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPSPPDR*GRCSPA
Trigger: AGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGA...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGAAGCGGCCGCACATaGGGCAGGCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSRSGRT*GRPFSP
Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGCTTCT...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACCGTACTTCTCATAGCTaGGCAGTAGGAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHRTSHS*AVGGWR
Trigger: ACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACG...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGCGTACTTCTCATAGCTaGGCAGTAGGAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWRTSHS*AVGGWR
Trigger: ACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACG...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGGCGGGAAGACGTACTaGATGACAATGGTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVGGKTY*MTMVPY
Trigger: GTACGGCACCATTGTCATCCAGTACGTCTTCCCGCC...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCCGAACTCCTGGGTTTaGGTGTTCAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGPNSWV*VFSPLD
Trigger: GTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTC +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPGRPPV*CQDTEL
Trigger: GAGTTCGGTATCCTGGCACCACACGGGTGGCCTACC...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGACAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRQLVLW*MSFQVM
Trigger: CATCACCTGGAACGACATCCACCACAAGACCAGCTG...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRVQLVL*WMSFQV
Trigger: CACCTGGAACGACATCCACCACAAGACCAGCTGCAC...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSVPLCS*SCGGCR
Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACTTCTCGGCTTGGTCGTaGAGCACAGCACATACCAGA +
Preference number: 4 (lower is better)
Translates to: GGENRALEVGLCQKGVAHFSAWS*STAHTR
Trigger: TCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCCCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGPEVQR*SSMWGR
Trigger: CCGCCCCCACATACTGCTCCACCGCTGAACTTCGGG...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
3UTR CAA 72 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGTGGGGTCTGGGTACCC +
Preference number: 4 (lower is better)
Translates to: SVICDTLRSQLL*HPGQVGGVWVP
Trigger: GGGTACCCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQAALAE*MPALLQ
Trigger: TTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGC...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRGRRTG*QWCRTS
Trigger: AGAAGTACGGCACCATTGTCATCCAGTACGTCTTCC...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGCCATTGCCGGTCACATaGCTGAGGCTGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMPLPVT*LRLLLG
Trigger: TCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGG...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS-3UTR TCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCTATTTCCACTCAGCTaGCCAGGACTCTCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQLFPLS*PGLSSA
Trigger: CGCTGACGAGAGTCCTGGTCAGCTGAGTGGAAATAG...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAA +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQGASTG*HSGQDE
Trigger: TTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACC...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLQSLCS*RCLHRL
Trigger: CAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTG...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTGGGCTGGGGTCTCTTTaGTCAGGAAGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCGLGSL*SGSPTR
Trigger: CCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCC...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACCCCTCGCAGAATGAATaGCGGCACTTCTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHPSQNE*RHFSNV
Trigger: GACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTCAGGCCTTTTTCACCTaGAGAGCCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPQAFFT*RARVMQ
Trigger: CTGCATCACCCGGGCTCTGCAGGTGAAAAAGGCCTG...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGCATTCTGGGGCTGGTTaGCCACCAGCTGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQHSGAG*PPAAHR
Trigger: TCTATGGGCAGCTGGTGGGCAACCAGCCCCAGAATG...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGRPPVW*QDTELL
Trigger: CAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCT...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR GCA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVGSAPC*PQGSPG
Trigger: TCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCC...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR GCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGGCTGGTCAAACGCCTTaGGGAACAGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRAGQTP*GTGSAP
Trigger: AGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGC...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGACTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRLCSCR*LHRLPF
Trigger: AAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAG...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551632.1
CDS-3UTR GCA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGACCCCAACTCCTCGCCTaGTCCACATTGCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRPQLLA*STLPNN
Trigger: ATTATTTGGCAATGTGGAGCAGGCGAGGAGTTGGGG...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSPGQPG*GLFAQE
Trigger: TTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGG...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCGGCGGGAAGACGTACTaGATGACAATGGTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSGGKTY*MTMVPY
Trigger: GTACGGCACCATTGTCATCCAGTACGTCTTCCCGCC...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGGGCGGGAAGACGTACTaGATGACAATGGTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQGGKTY*MTMVPY
Trigger: GTACGGCACCATTGTCATCCAGTACGTCTTCCCGCC...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSRIPNS*VWVFSP
Trigger: GGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCT...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTC +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCGRPPV*CQDTEL
Trigger: GAGTTCGGTATCCTGGCACCACACGGGTGGCCTACC...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTC +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGGRPPV*CQDTEL
Trigger: GAGTTCGGTATCCTGGCACCACACGGGTGGCCTACC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWQLVLW*MSFQVM
Trigger: CATCACCTGGAACGACATCCACCACAAGACCAGCTG...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCVQLVL*WMSFQV
Trigger: CACCTGGAACGACATCCACCACAAGACCAGCTGCAC...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRVPLCS*SCGGCR
Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKVPLCS*SCGGCR
Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCCAGGTAGGTGGGGTCTaGGTACCCAAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVQVGGV*VPKQLG
Trigger: CCCCAGCTGTTTGGGTACCCAGACCCCACCTACCTG...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGCAGGTAGGTGGGGTCTaGGTACCCAAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWQVGGV*VPKQLG
Trigger: CCCCAGCTGTTTGGGTACCCAGACCCCACCTACCTG...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGCCCGGGTCAGGTAGGTaGGGTCTGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWPGSGR*GLGTQT
Trigger: TGTTTGGGTACCCAGACCCCACCTACCTGACCCGGG...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCCCGGGTCAGGTAGGTaGGGTCTGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCPGSGR*GLGTQT
Trigger: TGTTTGGGTACCCAGACCCCACCTACCTGACCCGGG...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCCCCGGGTCAGGTAGGTaGGGTCTGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGPGSGR*GLGTQT
Trigger: TGTTTGGGTACCCAGACCCCACCTACCTGACCCGGG...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTAGACAGCAGGGGCCTTaGCAAAGGCGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCRQQGP*QRRCPS
Trigger: TGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCT...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTTCTCGGCTTGGTCGTaGAGCACAGCACATACCAGA +
Preference number: 4 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHFSAWS*STAHTR
Trigger: TCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGTGGTGGGTCCCTCAGTaGAAATGGAACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWWWVPQ*KWNKGE
Trigger: CTCCCCTTTGTTCCATTTCCACTGAGGGACCCACCA...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTACCCGGGTCAGGTAGGTaGGGTCTGGGTACCCAAACC +
Preference number: 4 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVPGSGR*GLGTQT
Trigger: GGTTTGGGTACCCAGACCCCACCTACCTGACCCGGG...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGCTTTTAGCAGCCCCTTaGGAGCCTTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWLLAAP*EPSGLG
Trigger: ACCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAG...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCCTGCAGAGCCCGGGTaGTGCAGCCCTCGCAGAATG +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRPAEPG*CSPRRM
Trigger: CATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRGRRTG*QWCRTS
Trigger: AGAAGTACGGCACCATTGTCATCCAGTACGTCTTCC...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAA +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCGASTG*HSGQDE
Trigger: TTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACC...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAA +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWGASTG*HSGQDE
Trigger: TTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACC...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPQSLCS*RCLHRL
Trigger: CAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGCTCTCCTGCTCTTCTaGCTCCTCCCGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRALLLF*LLPKAR
Trigger: CCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGRPPVW*QDTELL
Trigger: CAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCT...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTCCCCCAAGGCCAGATaGACCTCGAGATTCATAAGT +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRSPKAR*TSRFIS
Trigger: ACTTATGAATCTCGAGGTGCATCTGGCCTTGGGGGA...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGACACAAGGGCTCAGCTaGAGGGGCCTGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKTQGLS*RGLMFS
Trigger: GGAAAACATCAGGCCCCTCCAGCTGAGCCCTTGTGT...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CCA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCCACAGGCTGCCATTCTaGACAGGACGAACGACATTT +
Preference number: 4 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFHRLPF*TGRTTF
Trigger: AAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTG...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR CCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGAGTCCCACACGGGCTTaGACACAGTCACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVSPTRA*TQSLCS
Trigger: AGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRPGQPG*GLFAQE
Trigger: TTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCAGAAGCGGCCGCACATaGGGCAGGCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGRSGRT*GRPFSP
Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGCTTCT...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCAGAAGCGGCCGCACATaGGGCAGGCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVRSGRT*GRPFSP
Trigger: AGGTGAAAAAGGCCTGCCCCATGTGCGGCCGCTTCT...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCGTACTTCTCATAGCTaGGCAGTAGGAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRRTSHS*AVGGWR
Trigger: ACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACG...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQRIPNS*VWVFSP
Trigger: GGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCT...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGTGAAGGTGAGACGCTaGTCAAACGCCTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPVKVRR*SNALRN
Trigger: GTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCAC...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGTGAAGGTGAGACGCTaGTCAAACGCCTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKVKVRR*SNALRN
Trigger: GTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCAC...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGTCCCCCTGTGCAGCTaGTCTTGTGGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGVPLCS*SCGGCR
Trigger: ACGACATCCACCACAAGACCAGCTGCACAGGGGGAC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGTACCCAAACAGCTaGGGTCCCCCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRGYPNS*GPPVQL
Trigger: CAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGAGACAGCAGGGGCCTTaGCAAAGGCGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQRQQGP*QRRCPS
Trigger: TGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCT...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAAGACAGCAGGGGCCTTaGCAAAGGCGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKRQQGP*QRRCPS
Trigger: TGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCT...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGGGTCCTTTCTCGGCTTaGTCGTGGAGCACAGCACAT +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRGPFSA*SWSTAH
Trigger: ATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACC...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCAGCTGACCAGGACTaGGAGTGGGGGAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMSADQD*EWGKGK
Trigger: TTTACCCTTCCCCCACTCCCAGTCCTGGTCAGCTGA...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTCTGTGATTCCTCTGTaGCAACCCAGGCCGGACAAG +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQSVIPL*QPRPDK
Trigger: CTTGTCCGGCCTGGGTTGCCACAGAGGAATCACAGA...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR TCA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGAAAGCCCATGGAAGATaGTGGCAGCAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVKAHGR*WQQKSF
Trigger: GAAGGATTTCTGCTGCCATCATCTTCCATGGGCTTT...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGAAGTCTCGCCATCTATaGGGATGGACACACGGTGCT +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGKSRHL*GWTHGA
Trigger: AGCACCGTGTGTCCATCCTCATAGATGGCGAGACTT...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQGRRTG*QWCRTS
Trigger: AGAAGTACGGCACCATTGTCATCCAGTACGTCTTCC...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCCTATTTCCACTCAGCTaGCCAGGACTCTCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVLFPLS*PGLSSA
Trigger: CGCTGACGAGAGTCCTGGTCAGCTGAGTGGAAATAG...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGCCTCCATTTATTGACTaGTCCAAGAAGGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRPPFID*SKKEQL
Trigger: CAGCTGCTCCTTCTTGGATCAGTCAATAAATGGAGG...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR TCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGCCAGGGAGCCTTCCTTaGGAGCTAACTCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWPGSLP*ELTQSL
Trigger: AAGGGACTGAGTTAGCTCTCAAGGAAGGCTCCCTGG...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRLCSCR*LHRLPF
Trigger: GAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAG...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGCTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQLCSCR*LHRLPF
Trigger: GAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAG...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGCTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKLCSCR*LHRLPF
Trigger: GAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAG...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCACAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPQSLCS*RCLHRL
Trigger: CAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTG...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGCTGGGGTCTCTTTaGTCAGGAAGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRGLGSL*SGSPTR
Trigger: CCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCCCTCGCAGAATGAATaGCGGCACTTCTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGPSQNE*RHFSNV
Trigger: GACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGCAGGCCTTTTTCACCTaGAGAGCCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGQAFFT*RARVMQ
Trigger: CTGCATCACCCGGGCTCTGCAGGTGAAAAAGGCCTG...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGRPPVW*QDTELL
Trigger: CAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCT...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGCTGGTCAAACGCCTTaGGGAACAGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVAGQTP*GTGSAP
Trigger: AGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGC...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR GCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGCTGGTCAAACGCCTTaGGGAACAGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRAGQTP*GTGSAP
Trigger: AGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGC...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGGATGGGGGAAGGGATTaGCCCCTCCCTCTCGGAACT +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGDGGRD*PLPLGT
Trigger: AGTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATC...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGCCGGAATATTTCCTATaGTCCCCAACTCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKPEYFL*SPTPRL
Trigger: CAGGCGAGGAGTTGGGGAGCATAGGAAATATTCCGG...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATG +
Preference number: 4 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLNVLAF*ISPRQM
Trigger: CATCTGTCTGGGGGAGATCCAGAATGCCAAGACATT...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGAGCATCCGCCCATTCTaGGGCTGGTTGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRSIRPF*GWLPTS
Trigger: GCTGGTGGGCAACCAGCCCCAGAATGGGCGGATGCT...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGCGGGAAGACGTACTaGATGACAATGGTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGGGKTY*MTMVPY
Trigger: GTACGGCACCATTGTCATCCAGTACGTCTTCCCGCC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTC +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSGRPPV*CQDTEL
Trigger: GAGTTCGGTATCCTGGCACCACACGGGTGGCCTACC...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGTGAAGGTGAGACGCTaGTCAAACGCCTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGVKVRR*SNALRN
Trigger: GTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCAC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQQLVLW*MSFQVM
Trigger: CATCACCTGGAACGACATCCACCACAAGACCAGCTG...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVVQLVL*WMSFQV
Trigger: CACCTGGAACGACATCCACCACAAGACCAGCTGCAC...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGCAGGTAGGTGGGGTCTaGGTACCCAAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGQVGGV*VPKQLG
Trigger: CCCCAGCTGTTTGGGTACCCAGACCCCACCTACCTG...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGCAGGTAGGTGGGGTCTaGGTACCCAAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRQVGGV*VPKQLG
Trigger: CCCCAGCTGTTTGGGTACCCAGACCCCACCTACCTG...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGCCCGGGTCAGGTAGGTaGGGTCTGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRPGSGR*GLGTQT
Trigger: TGTTTGGGTACCCAGACCCCACCTACCTGACCCGGG...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCGGCCCCAGTTTAGGGTaGGTCTGTGATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGGPSLG*VCDSSV
Trigger: CACAGAGGAATCACAGACCCACCCTAAACTGGGGCC...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAGTCCCTCAGTGGAAATaGAACAAAGGGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKVPQWK*NKGEEP
Trigger: TGGCTCCTCCCCTTTGTTCCATTTCCACTGAGGGAC...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCTTTTAGCAGCCCCTTaGGAGCCTTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSLLAAP*EPSGLG
Trigger: ACCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAG...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGCTTTTAGCAGCCCCTTaGGAGCCTTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWLLAAP*EPSGLG
Trigger: ACCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAG...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWAALAE*MPALLQ
Trigger: TTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGC...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRAALAE*MPALLQ
Trigger: TTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKGRRTG*QWCRTS
Trigger: AGAAGTACGGCACCATTGTCATCCAGTACGTCTTCC...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPGRRTG*QWCRTS
Trigger: AGAAGTACGGCACCATTGTCATCCAGTACGTCTTCC...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGCTATTTCCACTCAGCTaGCCAGGACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWLFPLS*PGLGVG
Trigger: CCCCACTCCCAGTCCTGGTCAGCTGAGTGGAAATAG...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR TCA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGAGTCTGTTAAGGATGTaGACAAAGTGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRSLLRM*TKWQQP
Trigger: GGGCTGCTGCCACTTTGTTCACATCCTTAACAGACT...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGATCACTCTTCTTTCCCTaGTCCCTACTTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GAHISPISPPRHPKFSGGSLFFP*SLLVGR
Trigger: ACGACCTACAAGTAGGGAGCAGGGAAAGAAGAGTGA...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCCCCTCGCAGAATGAATaGCGGCACTTCTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVPSQNE*RHFSNV
Trigger: GACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGCAGGCCTTTTTCACCTaGAGAGCCCGGGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGQAFFT*RARVMQ
Trigger: CTGCATCACCCGGGCTCTGCAGGTGAAAAAGGCCTG...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCATTCTGGGGCTGGTTaGCCACCAGCTGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSHSGAG*PPAAHR
Trigger: TCTATGGGCAGCTGGTGGGCAACCAGCCCCAGAATG...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGCATTCTGGGGCTGGTTaGCCACCAGCTGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRHSGAG*PPAAHR
Trigger: TCTATGGGCAGCTGGTGGGCAACCAGCCCCAGAATG...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CQKGVAHTALKHLASGGWGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCGGAGAAAGAGGCTTCTaGTGGGTCCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGGERGF*WVLVEA
Trigger: TGCCTCTACTAGGACCCAGCAGAAGCCTCTTTCTCC...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGACAGTCTATCCGCGATaGAACACTTCTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGTVYPR*NTSLPI
Trigger: GATGGGGAGAGAAGTGTTGCATCGCGGATAGACTGT...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCACACAGGCTGCCATTCTaGACAGGACGAACGACATTT +
Preference number: 4 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPHRLPF*TGRTTF
Trigger: AAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTG...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCCGAACTCCTGGGTTTaGGTGTTCAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRPNSWV*VFSPLD
Trigger: GTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp GAGGCAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTGATAAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EADSRGLGKGDVLQSSVIRIPNS*VWVFSP
Trigger: GGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCT...TATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp GAGGCAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTGATAGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EADSRGLGKGDVLQSSVIVQLVL*WMSFQV
Trigger: CACCTGGAACGACATCCACCACAAGACCAGCTGCAC...TATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGAAACACTTGGCCAGTaGGGGATGGGGGAAGGGATT +
Preference number: 4 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRETLGQ*GMGEGI
Trigger: AATCCCTTCCCCCATCCCCCACTGGCCAAGTGTTTC...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGTCCTTTCTCGGCTTaGTCGTGGAGCACAGCACAT +
Preference number: 4 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRGPFSA*SWSTAH
Trigger: ATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACC...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGAAACGCCCACACAGGTaGAGGTCTTCTTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRKRPHR*RSSCHL
Trigger: GAGGTGGCAAGAAGACCTCCACCTGTGTGGGCGTTT...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAACTGGGTACCCAAACCTaGGAGCAAAGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKLGTQT*EQREMR
Trigger: CCTCATTTCTCTTTGCTCCCAGGTTTGGGTACCCAG...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCTATTTCCACTCAGCTaGCCAGGACTTTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPLFPLS*PGLLNP
Trigger: TGGGTTTAAAAGTCCTGGTCAGCTGAGTGGAAATAG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337737.8
CDS-3UTR GCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTTCACTCTTCTTTCCCTaGTCCCTACTTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPSLFFP*SLLVGR
Trigger: ACGACCTACAAGTAGGGAGCAGGGAAAGAAGAGTGA...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSSLELA*RLTLLS
Trigger: GGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCT...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTGGCAGCAGCCCCTaGAATAACAAAGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSSGSSP*NNKVLI
Trigger: AATGAGAACTTTGTTATTGCAGGGGCTGCTGCCACT...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCGCCTGCTCCACATTaGCAAATAATTCAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMSPAPH*QIIQPL
Trigger: TAGGGGCTGAATTATTTGGCAATGTGGAGCAGGCGA...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGAGGTGGAGGTCTTCTTaGCACCTCCCTCAGATCACA +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGRWRSS*HLPQIT
Trigger: TGTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCT...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTAGTCCCACACGGGCTTaGACACAGTCACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCSPTRA*TQSLCS
Trigger: AGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATG +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPNVLAF*ISPRQM
Trigger: CATCTGTCTGGGGGAGATCCAGAATGCCAAGACATT...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGCGTACTTCTCATAGCTaGGCAGTAGGAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWRTSHS*AVGGWR
Trigger: ACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACG...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGCGGGAAGACGTACTaGATGACAATGGTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRGGKTY*MTMVPY
Trigger: GTACGGCACCATTGTCATCCAGTACGTCTTCCCGCC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWRIPNS*VWVFSP
Trigger: GGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCT...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGTGAAGGTGAGACGCTaGTCAAACGCCTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRVKVRR*SNALRN
Trigger: GTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCAC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGGTGAAGGTGAGACGCTaGTCAAACGCCTTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGVKVRR*SNALRN
Trigger: GTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCAC...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGQLVLW*MSFQVM
Trigger: CATCACCTGGAACGACATCCACCACAAGACCAGCTG...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGAGACAGCAGGGGCCTTaGCAAAGGCGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRRQQGP*QRRCPS
Trigger: TGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCT...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGTTCTCGGCTTGGTCGTaGAGCACAGCACATACCAGA +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGFSAWS*STAHTR
Trigger: TCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCGGTCCTTTCTCGGCTTaGTCGTGGAGCACAGCACAT +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSGPFSA*SWSTAH
Trigger: ATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACC...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AGGGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCAAAGCCCATGGAAGATaGTGGCAGCAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: RETGSICTRGGENRALEVKAHGR*WQQKSF
Trigger: GAAGGATTTCTGCTGCCATCATCTTCCATGGGCTTT...GACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTAAAGCCCATGGAAGATaGTGGCAGCAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCKAHGR*WQQKSF
Trigger: GAAGGATTTCTGCTGCCATCATCTTCCATGGGCTTT...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGTGGCTCACACTGCATTaGAACACTTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRWLTLH*NTWPVG
Trigger: CCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCA...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGTTTAGGGTGGGTCTGTaGTTCCTCTGTGGCAACCCA +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWFRVGL*FLCGNP
Trigger: TGGGTTGCCACAGAGGAATCACAGACCCACCCTAAA...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ICTRGGENRALEVGLCQKSLELA*RLTLLS
Trigger: GGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCT...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGCAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWQSLCS*RCLHRL
Trigger: CAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTG...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGGGGAGTGGCTCACACTaGATTGAAACACTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGGSGSH*IETLGQ
Trigger: CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCC...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACTTGGAGGTCGGCCTCTaGCAGAAGGGAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHLEVGL*QKGVAH
Trigger: GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAA...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCACAACACTTCCAAATaGAGCTCAAACAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLHNTSK*SSNRKK
Trigger: CTTCTTTCTGTTTGAGCTGCATTTGGAAGTGTTGTG...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGAGTCCCACACGGGCTTaGACACAGTCACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRSPTRA*TQSLCS
Trigger: AGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACTCTCCCCCAGACAGATaGGGCAGGTGCTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHSPPDR*GRCSPA
Trigger: AGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGA...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGTTCTCGGCTTGGTCGTaGAGCACAGCACATACCAGA +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWFSAWS*STAHTR
Trigger: TCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCCCCGAAGTTCAGCGGTaGAGCAGTATGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLPEVQR*SSMWGR
Trigger: CCGCCCCCACATACTGCTCCACCGCTGAACTTCGGG...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGTTAAAAGCTACAGTCTaGCAGCGATTCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQLKATV*QRFQNR
Trigger: CCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAA...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTTAAAAGCTACAGTCTaGCAGCGATTCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMLKATV*QRFQNR
Trigger: CCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAA...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTCTCCCTCAGATCACATaGACCGGAATATTTCCTATG +
Preference number: 4 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPLPQIT*TGIFPM
Trigger: CATAGGAAATATTCCGGTCCATGTGATCTGAGGGAG...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTATTTTGTAGGCTAAGCTaGGCACACCAGGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVFCRLS*AHQDQV
Trigger: AACCTGGTCCTGGTGTGCCCAGCTTAGCCTACAAAA...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR TCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACCTTTTAGCAGCCCCTTaGGAGCCTTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHLLAAP*EPSGLG
Trigger: ACCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAG...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAGGGTTGTTAGCTGTTTaGACTTGCTATTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKGLLAV*TCYYPH
Trigger: ATGGGGATAATAGCAAGTTCAAACAGCTAACAACCC...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR GCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACACCCAGCACAGGCAGTaGTGTCTGTCAGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHTQHRQ*CLSAPK
Trigger: CTTGGGAGCTGACAGACAGCACTGCCTGTGCTGGGT...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR GCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGTCACTCTTCTTTCCCTaGTCCCTACTTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGSLFFP*SLLVGR
Trigger: ACGACCTACAAGTAGGGAGCAGGGAAAGAAGAGTGA...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCGGGCTGGGGTCTCTTTaGTCAGGAAGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLGLGSL*SGSPTR
Trigger: CCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCC...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCCCTCGCAGAATGAATaGCGGCACTTCTCCAATGTC +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRPSQNE*RHFSNV
Trigger: GACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTAGCTTCTCCCCAAGTTaGTCAAGAAGGAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCSFSPS*SRRNFN
Trigger: GTTGAAGTTCCTTCTTGAGCAACTTGGGGAGAAGCT...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGGACCTGGAAAGCCCATaGAAGATGATGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWDLESP*KMMAAE
Trigger: TTCTGCTGCCATCATCTTCCATGGGCTTTCCAGGTC...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR TCA 90 bp AAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGGGGTGACCTCCATTTATTaGCTGATCCAAGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KKPRAMEGQGNREYMYTGVTSIY*LIQEGA
Trigger: TGCTCCTTCTTGGATCAGTCAATAAATGGAGGTCAC...CCCCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR GCA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCGCTGGTCAAACGCCTTaGGGAACAGGGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLAGQTP*GTGSAP
Trigger: AGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGC...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACACACAAGGGCTCAGCTaGAGGGGCCTGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHTQGLS*RGLMFS
Trigger: GGAAAACATCAGGCCCCTCCAGCTGAGCCCTTGTGT...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGAGTCCCACACGGGCTTaGACACAGTCACTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRSPTRA*TQSLCS
Trigger: AGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATG +
Preference number: 4 (lower is better)
Translates to: RKSQGQWRGRETGSICTRNVLAF*ISPRQM
Trigger: CATCTGTCTGGGGGAGATCCAGAATGCCAAGACATT...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACCGTACTTCTCATAGCTaGGCAGTAGGAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHRTSHS*AVGGWR
Trigger: ACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACG...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGACAGCAGGGGCCTTaGCAAAGGCGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHRQQGP*QRRCPS
Trigger: TGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCT...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR GCA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWSLELA*RLTLLS
Trigger: GGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCT...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATG +
Preference number: 4 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRNVLAF*ISPRQM
Trigger: CATCTGTCTGGGGGAGATCCAGAATGCCAAGACATT...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCTTAAAAGCTACAGTCTaGCAGCGATTCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: TLGPFSAWSWSTAHTRKSLKATV*QRFQNR
Trigger: CCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAA...GCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCCACAGGCTGCCATTCTaGACAGGACGAACGACATTT +
Preference number: 4 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLHRLPF*TGRTTF
Trigger: AAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTG...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR GCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHSLELA*RLTLLS
Trigger: GGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCT...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CCA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACTTAAAAGCTACAGTCTaGCAGCGATTCCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHLKATV*QRFQNR
Trigger: CCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAA...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CCA 90 bp GAGGATGGACACACGGTGCTCCTCCCGAAGCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAAGTCCCACACGGGCTTGGACACAGT +
Preference number: 5 (lower is better)
Translates to: EDGHTVLLPKPGQPG*GLFAQEVPHGLGHS
Trigger: ACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS CCA 90 bp GTGGGGGTGCATGTCGGCCCGATCGCAGCCCTCAGAACCCCCGAATaGAGGCCAAGGCTGGAGGGTGCTAGAAAGATGATCGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: VGVHVGPIAALRTPE*RPRLEGARKMIGRA
Trigger: TGCCCGGCCGATCATCTTTCTAGCACCCTCCAGCCTTGGCCTCCATTCGGGGGTTCTGAGGGCTGCGATCGGGCCGACATGCACCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CAA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCCGGGCTGGGGTCTCTTaGCTCAGGAAGTCCCACACG +
Preference number: 5 (lower is better)
Translates to: GEGRTEPWRSASARREWLRAGVS*LRKSHT
Trigger: CGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCG...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS GCA 90 bp CCTTGTTGCCCTCAGGGCAGTCCGGGAGGTAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTGGGTTTGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PCCPQGSPGGRPPVW*QDTELLGLGVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCTACCTCCCGGACTGCCCTGAGGGCAACAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS CCA 90 bp GCACCTTGTTGCCCTCAGGGCAGTCCGGGAGGTAGGCCACCCGTGTaGTGCCAGGATACCGAACTCCTGGGTTTGGGTGTTCAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: APCCPQGSPGGRPPV*CQDTELLGLGVQPP
Trigger: AGGGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCTACCTCCCGGACTGCCCTGAGGGCAACAAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS-3UTR CAA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCTAGGTAGAGCCCATTaGGAGGGGCCGGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLLGRAH*EGPGED
Trigger: GTCCTCCCCCGGCCCCTCCAAATGGGCTCTACCTAG...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GEGRTEPWRSASARREWLTELLG*GVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGT...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCCAGACAGCAGGGGCCTaGGCAAAGGCGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GEGRTEPWRSASARREWLQTAGA*AKAMSF
Trigger: GAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGCTGAGTCTGGTCGCATaGGGCTACGGGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVLSLVA*GYGAVS
Trigger: GGAGACAGCCCCGTAGCCCAATGCGACCAGACTCAG...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CAA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACCGGGCTGGGGTCTCTTaGCTCAGGAAGTCCCACACG +
Preference number: 5 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHRAGVS*LRKSHT
Trigger: CGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCG...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCCTAGGTAGAGCCCATTaGGAGGGGCCGGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSHQPNFSSPAPEVQRWSLGRAH*EGPGED
Trigger: GTCCTCCCCCGGCCCCTCCAAATGGGCTCTACCTAG...GCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCTCTTTTAGCAGCCCCTaGAGAGCCTTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GEGRTEPWRSASARREWLSFSSP*RAFRAR
Trigger: CCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAGA...GAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTAGGGTCAGCACCTTGTaGCCCTCAGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCRVSTL*PSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCT...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACAACAGGGTCAGCACCTaGTTGCCCTCAGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: GGENRALEVGLCQKGVAHNRVST*LPSGQS
Trigger: GGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTT...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRRSQLL*HPGQVG
Trigger: ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCG...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS TCA 90 bp GCTGACCAGGACTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGCAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: ADQDSRQRRHCRSHD*GCCWDDGPGLSNKE
Trigger: CTCCTTGTTGCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGTCCTGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS-3UTR CAA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCTGAGTCTGGTCGCATaGGGCTACGGGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPLSLVA*GYGAVS
Trigger: GGAGACAGCCCCGTAGCCCAATGCGACCAGACTCAG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337737.8
ENST00000548198.5
CDS-3UTR CAA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCTAGGTAGAGCCCATTaGGAGGGGCCGGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGLGRAH*EGPGED
Trigger: GTCCTCCCCCGGCCCCTCCAAATGGGCTCTACCTAG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRTELLG*GVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGT...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGAGGGTCAGCACCTTGTaGCCCTCAGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: ICTRGGENRALEVGLCQKRVSTL*PSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCT...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAAGGGTCAGCACCTTGTaGCCCTCAGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKRVSTL*PSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCT...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTAGGGTCAGCACCTTGTaGCCCTCAGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPRVSTL*PSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCT...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GGENRALEVGLCQKGVAHPVQLV*WWMSFQ
Trigger: CTGGAACGACATCCACCACAAGACCAGCTGCACAGG...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPRSQLL*HPGQVG
Trigger: ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGGGGTCTGGCAGACAGCAGGGGCCTaGGCAAAGGCGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTLRSQLLLHPGQVGGVWQTAGA*AKAMSF
Trigger: GAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG...CCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTaGGCCAGTGGGGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GGENRALEVGLCQKGVAHTALKH*ASGGWG
Trigger: CCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGT...GTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS TCA 90 bp CCCAAGAAAGCCTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGCAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: PKKASRQRRHCRSHD*GCCWDDGPGLSNKE
Trigger: CTCCTTGTTGCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGGCTTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550596.5
ENST00000551835.5
CDS TCA 90 bp AGGTCCAAGTCCTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGCAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: RSKSSRQRRHCRSHD*GCCWDDGPGLSNKE
Trigger: CTCCTTGTTGCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGGACTTGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549583.5
CDS-3UTR CAA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGAACAGGGTCAGCACCTaGTTGCCCTCAGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQNRVST*LPSGQS
Trigger: GGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTT...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGCGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQRWSNA*RNRVST
Trigger: GGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCG...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGRWSNA*RNRVST
Trigger: GGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRPVQLV*WWMSFQ
Trigger: CTGGAACGACATCCACCACAAGACCAGCTGCACAGG...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCACGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: EYMYTGRGEQSLGGRPLPRSQLL*HPGQVG
Trigger: ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCG...TGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGACAGACAGCAGGGGCCTaGGCAAAGGCGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GAHISPISPPRHPKFSGGQTAGA*AKAMSF
Trigger: GAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTGGATGGGGGAAGGGATaGCCCCCTCCCTCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCGWGKG*PPPSRN
Trigger: GTTCCGAGAGGGAGGGGGCAATCCCTTCCCCCATCC...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGACTGCATTGAAACACTaGGCCAGTGGGGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: TGSSHQPNFSSPAPEVQRTALKH*ASGGWG
Trigger: CCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGT...CCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 5 (lower is better)
Translates to: RGEQSLGGRPLPEGSGSHRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...GTGTGAGCCACTCCCTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS TCA 90 bp GTGGGGAAAGCTGGAGAACATAGATGTCAGAAGTCTCGCCATCTATaGGGATGGACACACGGTGCTCCTCCCGAAGCCGGGCCAGCCGGG +
Preference number: 5 (lower is better)
Translates to: VGKAGEHRCQKSRHL*GWTHGAPPEAGPAG
Trigger: CCCGGCTGGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCTCATAGATGGCGAGACTTCTGACATCTATGTTCTCCAGCTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS TCA 90 bp TTGGGTGTTCAGCCCCCTGGACACCGGGCGGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCTCATAGCTGGGCAGTAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LGVQPPGHRAGRRTG*QWCRTSHSWAVGGW
Trigger: CCACCCTCCTACTGCCCAGCTATGAGAAGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGTGTCCAGGGGGCTGAACACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS-3UTR CAA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAAGTCCCACACGGGCTaGGACACAGTCACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRKSHTG*DTVTLF
Trigger: GAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTT...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCGGGCTGGGGTCTCTTaGCTCAGGAAGTCCCACACG +
Preference number: 5 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCRAGVS*LRKSHT
Trigger: CGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCG...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGATCTTTTAGCAGCCCCTaGAGAGCCTTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GAHISPISPPRHPKFSGGSFSSP*RAFRAR
Trigger: CCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAGA...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAAACCGGGAGTATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GNREYMYTGRGEQSLGGRTELLG*GVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGT...CCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATATACTCCCGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKTELLG*GVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGT...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp CCTCCCTCTCGGAACTCCCTTCCCAGTCAGACAGGTCCCCTACAGGTGTGGTGTCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: PPSRNSLPSQTGPLQVWCPVQLV*WWMSFQ
Trigger: CTGGAACGACATCCACCACAAGACCAGCTGCACAGG...ACACCACACCTGTAGGGGACCTGTCTGACTGGGAAGGGAGTTCCGAGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGRSQLL*HPGQVG
Trigger: ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCG...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGCAGACAGCAGGGGCCTaGGCAAAGGCGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQQTAGA*AKAMSF
Trigger: GAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS GCA 90 bp GGGCTTGGACACAGTCACTTTGTTCTTGCAGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAACGACACTGCCCCCAGGGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GLGHSHFVLAGASTG*HSGQDERHCPQGER
Trigger: CCTTTCACCCTGGGGGCAGTGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548478.1
CDS GCA 90 bp GGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTCTGGACAGGACGAACGACACTGCCC +
Preference number: 5 (lower is better)
Translates to: GSPTRAWTQSLCSCR*LHRLPFWTGRTTLP
Trigger: GGGCAGTGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548478.1
CDS CCA 90 bp GGGTACCCAAACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATGACATTCGGTCTCCCTGTGGTCATG +
Preference number: 5 (lower is better)
Translates to: GYPNSWGPPVQLVLW*MSFQVMTFGLPVVM
Trigger: CATGACCACAGGGAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CCA 90 bp TCTGGGTACCCAAACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTGATGACATTCGGTCTCCCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SGYPNSWGPPVQLVL*WMSFQVMTFGLPVV
Trigger: GACCACAGGGAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFTVTLF*QVPPQA
Trigger: AGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGT...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGCGGGCTGGGGTCTCTTaGCTCAGGAAGTCCCACACG +
Preference number: 5 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRRAGVS*LRKSHT
Trigger: CGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCG...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGCTAGGTAGAGCCCATTaGGAGGGGCCGGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGLGRAH*EGPGED
Trigger: GTCCTCCCCCGGCCCCTCCAAATGGGCTCTACCTAG...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCACTTCTCCAATGTCTaGGCATTCTGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: TAGSMAGDGELTSAQFLLHFSNV*AFWISP
Trigger: GGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTG...GAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTAACAGGGTCAGCACCTaGTTGCCCTCAGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCNRVST*LPSGQS
Trigger: GGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTT...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GAGGCAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTGATACGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: EADSRGLGKGDVLQSSVIRWSNA*RNRVST
Trigger: GGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCG...TATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGCGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRRWSNA*RNRVST
Trigger: GGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCG...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCCAGACAGCAGGGGCCTaGGCAAAGGCGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGQTAGA*AKAMSF
Trigger: GAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTG...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGACTGCATTGAAACACTaGGCCAGTGGGGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQTALKH*ASGGWG
Trigger: CCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGT...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGCAGGTGGAGGTCTTCTaGCCACCTCCCTCAGATCAC +
Preference number: 5 (lower is better)
Translates to: HQPNFSSPAPEVQRWSSMQVEVF*PPPSDH
Trigger: GTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCTG...CATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CAA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTATCCGTGAGCGAGGGGTaGGTGGGTCCCTCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVSVSEG*VGPSVE
Trigger: TTCCACTGAGGGACCCACCAACCCCTCGCTCACGGA...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS TCA 90 bp GGCCTTTTTCACCTGCAGAGCCCGGGTGATGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAATGTCTTGGCATTCTGGATCTCCCC +
Preference number: 5 (lower is better)
Translates to: GLFHLQSPGDAALAE*MPALLQCLGILDLP
Trigger: GGGGAGATCCAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGGTGAAAAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS CCA 90 bp CGCCCACACAGGTGGAGGTCTTCTTGCCACCTCCCTCAGATCACATaGACCGGAATATTTCCTATGCTCCCCAACTCCTCGCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RPHRWRSSCHLPQIT*TGIFPMLPNSSPAP
Trigger: TGGAGCAGGCGAGGAGTTGGGGAGCATAGGAAATATTCCGGTCCATGTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCTGTGTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS-3UTR CAA 90 bp CACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: HTQPAPWRVTGSSHQPNFLDTVT*FLQVPP
Trigger: TGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAA...GAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGACACTTCTCCAATGTCTaGGCATTCTGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GAHISPISPPRHPKFSGGHFSNV*AFWISP
Trigger: GGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTG...TCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACTTCTCCAATGTCTaGGCATTCTGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPHFSNV*AFWISP
Trigger: GGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTG...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAAACAGGGTCAGCACCTaGTTGCCCTCAGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVNRVST*LPSGQS
Trigger: GGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTT...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCPVQLV*WWMSFQ
Trigger: CTGGAACGACATCCACCACAAGACCAGCTGCACAGG...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCGCCAGGGAGCCTTCCTaGAGAGCTAACTCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGAREPS*RANSVP
Trigger: AGGGACTGAGTTAGCTCTCAAGGAAGGCTCCCTGGC...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS GCA 90 bp TGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTGCCATTCTGGACAGGACGAACGACA +
Preference number: 5 (lower is better)
Translates to: CSGSPTRAWTQSLCS*RCLHRLPFWTGRTT
Trigger: TGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS CCA 90 bp CCCTCGCAGAATGAATGCCGGCACTTCTCCAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATGGGGCAGGTGCTCTCCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSQNECRHFSNVLAF*ISPRQMGQVLSCSS
Trigger: AGAAGAGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: GELTSAQFLLPGTRSSAVLKSLE*ACRLTL
Trigger: AAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAG...CACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATGGCGGGTGACGGGGAGCTCACATCAGCCCAATTTCTCCTCCCCGGCACCCGACAGGACGAACGACATTaGATCCTGAAGAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: MAGDGELTSAQFLLPGTRQDERH*ILKSLE
Trigger: TTCTAAGCTCTTCAGGATCAAATGTCGTTCGTCCTG...TCGGGTGCCGGGGAGGAGAAATTGGGCTGATGTGAGCTCCCCGTCACCCGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR CAA 90 bp TGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCCACCCTACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: WSSMWGRLGIKRPSLPHPTVTLF*QVPPQA
Trigger: AGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGT...AGGGTGGGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCTGATGAACACACACAGCCGGCTCCATGGCGGGTGACGGGGAGCTCACATCAGTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SDEHTQPAPWRVTGSSHQLDTVT*FLQVPP
Trigger: TGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAA...CTGATGTGAGCTCCCCGTCACCCGCCATGGAGCCGGCTGTGTGTGTTCATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGCACTTCTCCAATGTCTaGGCATTCTGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQHFSNV*AFWISP
Trigger: GGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTG...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AGAAAAAGCCAAGGGCAATGGAGGGGCAGGGAAACCGGGAGTATATGTACACGGACCGAACTCCTGGGTTaGGGTGTTCAGCCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RKSQGQWRGRETGSICTRTELLG*GVQPPG
Trigger: TCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGT...CCGTGTACATATACTCCCGGTTTCCCTGCCCCTCCATTGCCCTTGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GAGGCAGACAGCAGGGGCCTTGGCAAAGGCGATGTCCTTCAGTCATCTGTGATACCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EADSRGLGKGDVLQSSVIPVQLV*WWMSFQ
Trigger: CTGGAACGACATCCACCACAAGACCAGCTGCACAGG...TATCACAGATGACTGAAGGACATCGCCTTTGCCAAGGCCCCTGCTGTCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRRSQLL*HPGQVG
Trigger: ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCG...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 5 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGCTCGCCTGCTCCACATaGCCAAATAATTCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQLACST*PNNSAP
Trigger: AGGGGCTGAATTATTTGGCAATGTGGAGCAGGCGAG...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS GCA 90 bp TTTTTCACCTGCAGAGCCCGGGTGATGCAGCCCTCGCAGAATGAATaGCGGCACTTCTCCAATGTCTTGGCATTCTGGATCTCCCCCAGA +
Preference number: 5 (lower is better)
Translates to: FFTCRARVMQPSQNE*RHFSNVLAFWISPR
Trigger: TCTGGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGGTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GGTCGGCCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GRPLPEGSGSHCIETLGQLDTVT*FLQVPP
Trigger: TGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAA...CTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGGCCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATGGAAGTCCCACACGGGCTaGGACACAGTCACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: CQKGVAHTALKHLASGGWKSHTG*DTVTLF
Trigger: GAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTT...CCATCCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGACTGCATTGAAACACTaGGCCAGTGGGGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWTALKH*ASGGWG
Trigger: CCCCCATCCCCCACTGGCCAAGTGTTTCAATGCAGT...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 5 (lower is better)
Translates to: FSAWSWSTAHTRKSQGQWRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...CCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS GCA 90 bp GGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTCTGGACAGGACGAACGACATTTGAT +
Preference number: 5 (lower is better)
Translates to: GSPTRAWTQSLCSCR*LHRLPFWTGRTTFD
Trigger: ATCAAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS-3UTR CAA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGLKSLE*ACRLTL
Trigger: AAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAG...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRTVTLF*QVPPQA
Trigger: AGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGT...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGTCTTTTAGCAGCCCCTaGAGAGCCTTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: KSYSLAAIPEQGKEVPHRSFSSP*RAFRAR
Trigger: CCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAGA...CCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCAGGGTCAGCACCTTGTaGCCCTCAGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLRVSTL*PSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCT...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp CCTCTGCCAGAAGGGAGTGGCTCACACTGCATTGAAACACTTGGCCAGTGGGGGATAATCACCGTTCCTTaGACCCCCTTCTATCCGCAA +
Preference number: 5 (lower is better)
Translates to: PLPEGSGSHCIETLGQWGIITVP*TPFYPQ
Trigger: TTGCGGATAGAAGGGGGTCAAAGGAACGGTGATTAT...CCCCCACTGGCCAAGTGTTTCAATGCAGTGTGAGCCACTCCCTTCTGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS-3UTR CAA 90 bp CTTCCCCACCCTAGGTCCTTTCTCGGCTTGGTCGTGGAGCACAGCACATACCAGCAGCTTCTCCCCAAGTaGCTCAAGAAGGAACTTCAA +
Preference number: 5 (lower is better)
Translates to: LPHPRSFLGLVVEHSTYQQLLPK*LKKELQ
Trigger: TTGAAGTTCCTTCTTGAGCAACTTGGGGAGAAGCTG...CTGGTATGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCTAGGGTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CAA 90 bp CAGCGGTGGAGCAGTATGTGGGGGCGGTTAGGAATCAAGAGACCCTCCCTTCCCTGTGACCTCCATTTATaGACTGATCCAAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: QRWSSMWGRLGIKRPSLPCDLHL*TDPRRS
Trigger: GCTCCTTCTTGGATCAGTCAATAAATGGAGGTCACA...GGGAAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS-3UTR CAA 90 bp CACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACCTGGGAGCAAAGAGAAAAGATGGCTGAACAGTTaGGAAGTGGTTCTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HPGQVGGVWVPKPGSKEKRWLNS*EVVLSS
Trigger: ACTGGAGAGAACCACTTCCAAACTGTTCAGCCATCT...TTTCTCTTTGCTCCCAGGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS-3UTR CAA 90 bp ATATGTACACGGGGAGGGGAGAACAGAGCCTTGGAGGTCGGCCTCTGCCAGAAGCAGGACGAACGACATTaGATCCTGAAGAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: ICTRGGENRALEVGLCQKQDERH*ILKSLE
Trigger: TTCTAAGCTCTTCAGGATCAAATGTCGTTCGTCCTG...CTTCTGGCAGAGGCCGACCTCCAAGGCTCTGTTCTCCCCTCCCCGTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR CAA 90 bp AAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAGGGAAGTCCCACACGGGCTaGGACACAGTCACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: KATVWQRFQNRVRRFLTGKSHTG*DTVTLF
Trigger: GAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTT...CCCTGTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp ATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCACAACAGGGTCAGCACCTaGTTGCCCTCAGGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: IKSYSLAAIPEQGKEVPHNRVST*LPSGQS
Trigger: GGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTT...GTGAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp TCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTACACACCAGGACCAGGTaGAATGTAGGAGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: SVICDTLRSQLLLHPGQVHTRTR*NVGETE
Trigger: CTCAGTTTCTCCTACATTCAACCTGGTCCTGGTGTG...TACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS GCA 90 bp GGGCTTGGACACAGTCACTTTGTTCTTGCAGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAACGACATTTGATCCTGAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: GLGHSHFVLAGASTG*HSGQDERHLILKSL
Trigger: TAAGCTCTTCAGGATCAAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS GCA 90 bp TGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTGCCATTTTTGATCCTGAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: CSGSPTRAWTQSLCS*RCLHRLPFLILKSL
Trigger: TAAGCTCTTCAGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS GCA 90 bp GATCACATGGACCGGAATATTTCCTATGCTCCCCAACTCCTCGCCTaGTCCACATTGCCAAATAATTCAGCCCCTATTGCCAGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: DHMDRNISYAPQLLA*STLPNNSAPIAREP
Trigger: AGGCTCCCTGGCAATAGGGGCTGAATTATTTGGCAATGTGGAGCAGGCGAGGAGTTGGGGAGCATAGGAAATATTCCGGTCCATGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS-3UTR CAA 90 bp TCGGCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: SAWSWSTAHTRKSQGQWRLKSLE*ACRLTL
Trigger: AAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAG...CCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GCTTGGTCGTGGAGCACAGCACATACCAGAAAAAGCCAAGGGCAATGGAGGGGCCAGGACGAACGACATTaGATCCTGAAGAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: AWSWSTAHTRKSQGQWRGQDERH*ILKSLE
Trigger: TTCTAAGCTCTTCAGGATCAAATGTCGTTCGTCCTG...GCCCCTCCATTGCCCTTGGCTTTTTCTGGTATGTGCTGTGCTCCACGACCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
CDS-3UTR CAA 90 bp ATCAGCCCAATTTCTCCTCCCCGGCACCCGAAGTTCAGCGGTGGAGCAGTATGTCACAGGCTGCCATTTTaGATCCTGAAGAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: ISPISPPRHPKFSGGAVCHRLPF*ILKSLE
Trigger: TTCTAAGCTCTTCAGGATCAAAAATGGCAGCCTGTG...ACATACTGCTCCACCGCTGAACTTCGGGTGCCGGGGAGGAGAAATTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551632.1
CDS-3UTR CAA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCAGGTCCTTTCTCGGCTaGGTCGTGGAGCACAGCACA +
Preference number: 5 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLRSFLG*VVEHST
Trigger: TGTGCTGTGCTCCACGACCAAGCCGAGAAAGGACCT...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS-3UTR CAA 90 bp GTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTTGCACCCGGGTCAGGTAGGTGTTAGCTGTTTGAACTaGCTATTATCCCCATGCTCA +
Preference number: 5 (lower is better)
Translates to: VICDTLRSQLLLHPGQVGVSCLN*LLSPCS
Trigger: TGAGCATGGGGATAATAGCAAGTTCAAACAGCTAAC...ACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS GCA 90 bp AAGAGAAGTCAGGAAAGAAAACGCCCACACAGGTGGAGGTCTTCTTaGCACCTCCCTCAGATCACATGGACCGGAATATTTCCTATGCTC +
Preference number: 5 (lower is better)
Translates to: KRSQERKRPHRWRSS*HLPQITWTGIFPML
Trigger: GAGCATAGGAAATATTCCGGTCCATGTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCTGTGTGGGCGTTTTCTTTCCTGACTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS TCA 90 bp CCACATTGCCAAATAATTCAGCCCCTATTGCCAGGGAGCCTTCCTTaGGAGCTAACTCAGTCCCTTCTGCTGAAGTCTGTTAAGGATGTG +
Preference number: 5 (lower is better)
Translates to: PHCQIIQPLLPGSLP*ELTQSLLLKSVKDV
Trigger: CACATCCTTAACAGACTTCAGCAGAAGGGACTGAGTTAGCTCTCAAGGAAGGCTCCCTGGCAATAGGGGCTGAATTATTTGGCAATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS-3UTR CAA 90 bp AAATTAAAAGCTACAGTCTGGCAGCGATTCCAGAACAGGGTAAGGAGGTTCCTCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KLKATVWQRFQNRVRRFLLDTVT*FLQVPP
Trigger: TGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAA...GAGGAACCTCCTTACCCTGTTCTGGAATCGCTGCCAGACTGTAGCTTTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CCA 72 bp CCAGAGGGAGGCACAGCCCGGATGGGCAAGGGTCCCTaGGGGCATCCACTGAAGCAGCTCCCGCCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: PEGGTARMGKGP*GHPLKQLPPSP
Trigger: GGGGGAGGGCGGGAGCTGCTTCAGTGGATGCCCCCAGGGACCCTTGCCCATCCGGGCTGTGCCTCCCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CCA 72 bp CACACGGTGCTCCTCCCGAAGCCGGGCCAGCCGGGCTaGGGTCTCTTTGCTCAGGAAGTCCCACACGGGCTT +
Preference number: 6 (lower is better)
Translates to: HTVLLPKPGQPG*GLFAQEVPHGL
Trigger: AAGCCCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGGCTTCGGGAGGAGCACCGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
ENST00000551835.5
CDS GCA 72 bp CCCCAGACAGATGGGGCAGGTGCTCTCCTGCTCTTCTaGCTCCTCCCGAAGGCGAGGAGGAAGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PQTDGAGALLLF*LLPKARRKRWG
Trigger: CCCCCACCTCTTCCTCCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGCACCTGCCCCATCTGTCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS CCA 72 bp GTAGGCCACCCGTGTGGTGCCAGGATACCGAACTCCTaGGTTTGGGTGTTCAGCCCCCTGGACACCGGGCGG +
Preference number: 6 (lower is better)
Translates to: VGHPCGARIPNS*VWVFSPLDTGR
Trigger: CCGCCCGGTGTCCAGGGGGCTGAACACCCAAACCCAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS TCA 72 bp GCCTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGC +
Preference number: 6 (lower is better)
Translates to: ASRQRRHCRSHD*GCCWDDGPGLS
Trigger: GCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550596.5
ENST00000551835.5
CDS GCA 72 bp TCAGAAGTCTCGCCATCTATGAGGATGGACACACGGTaGTCCTCCCGAAGCCGGGCCAGCCGGGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: SEVSPSMRMDTR*SSRSRASRAGV
Trigger: GACCCCAGCCCGGCTGGCCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCTCATAGATGGCGAGACTTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp GGTCAAACGCCTTGCGGAACAGGGTCAGCACCTTGTTaGCCTCAGGGCAGTCCGGGAGGTAGGCCACCCGTG +
Preference number: 6 (lower is better)
Translates to: GQTPCGTGSAPC*PQGSPGGRPPV
Trigger: CACGGGTGGCCTACCTCCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTTCCGCAAGGCGTTTGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS TCA 72 bp GACTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGC +
Preference number: 6 (lower is better)
Translates to: DSRQRRHCRSHD*GCCWDDGPGLS
Trigger: GCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548804.5
CDS TCA 72 bp TCCTCTCGTCAGCGCCGCCATTGCCGGTCACATGACTaGGGCTGTTGCTGGGATGACGGTCCGGGCCTTAGC +
Preference number: 6 (lower is better)
Translates to: SSRQRRHCRSHD*GCCWDDGPGLS
Trigger: GCTAAGGCCCGGACCGTCATCCCAGCAACAGCCTCAGTCATGTGACCGGCAATGGCGGCGCTGACGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549583.5
CDS GCA 72 bp CCTCAGGGCAGTCCGGGAGGTAGGCCACCCGTGTGGTaGCAGGATACCGAACTCCTGGGTTTGGGTGTTCAG +
Preference number: 6 (lower is better)
Translates to: PQGSPGGRPPVW*QDTELLGLGVQ
Trigger: CTGAACACCCAAACCCAGGAGTTCGGTATCCTGGCACCACACGGGTGGCCTACCTCCCGGACTGCCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS GCA 72 bp TGGATCTCCCCCAGACAGATGGGGCAGGTGCTCTCCTaGTCTTCTGCCTCCTCCCGAAGGCGAGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: WISPRQMGQVLS*SSASSRRRGGR
Trigger: TCTTCCTCCTCGCCTTCGGGAGGAGGCAGAAGAGCAGGAGAGCACCTGCCCCATCTGTCTGGGGGAGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS CCA 72 bp CCAGCACAGGCAGTGCTGTCTGTCAGCTCCCAAGTCTaGCATTTAGGGAGGGGCGGGGCTCACACAAGGGCT +
Preference number: 6 (lower is better)
Translates to: PAQAVLSVSSQV*HLGRGGAHTRA
Trigger: AGCCCTTGTGTGAGCCCCGCCCCTCCCTAAATGCCAGACTTGGGAGCTGACAGACAGCACTGCCTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000549583.5
CDS CAA 90 bp GTCATGGACGTGCCGATAGTGAAGGTGAGACGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACCTTGTTGCCCTCAGGGCAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: VMDVPIVKVRRWSNA*RNRVSTLLPSGQSG
Trigger: CCCGGACTGCCCTGAGGGCAACAAGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCACTATCGGCACGTCCATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS CCA 72 bp CATGTCGGCCCGATCGCAGCCCTCAGAACCCCCGAATaGAGGCCAAGGCTGGAGGGTGCTAGAAAGATGATC +
Preference number: 6 (lower is better)
Translates to: HVGPIAALRTPE*RPRLEGARKMI
Trigger: GATCATCTTTCTAGCACCCTCCAGCCTTGGCCTCCATTCGGGGGTTCTGAGGGCTGCGATCGGGCCGACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548198.5
CDS CAA 72 bp GGGTCGCACAGCTGGGGTCCCCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAGGTGATGACATTCGGT +
Preference number: 6 (lower is better)
Translates to: GSHSWGPPVQLV*WWMSFQVMTFG
Trigger: ACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTGCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS CAA 90 bp GGGTCTGGGTACCCAAACAGCTGGGGTCCCCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAGGTGATGACATTCGGTCTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: GSGYPNSWGPPVQLV*WWMSFQVMTFGLPV
Trigger: CACAGGGAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTTTGGGTACCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS TCA 72 bp CAGCCCCCTGGACACCGGGCGGGAAGACGTACTGGATaGCAATGGTGCCGTACTTCTCATAGCTGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: QPPGHRAGRRTG*QWCRTSHSWAV
Trigger: TACTGCCCAGCTATGAGAAGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGTGTCCAGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS CCA 72 bp CACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATGACATTCGGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: HSWGPPVQLVLW*MSFQVMTFGLP
Trigger: AGGGAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS CCA 72 bp TCGCACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTGATGACATTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: SHSWGPPVQLVL*WMSFQVMTFGL
Trigger: GAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS CAA 72 bp GTGCCGATAGTGAAGGTGAGACGCTGGTCAAACGCCTaGCGGAACAGGGTCAGCACCTTGTTGCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: VPIVKVRRWSNA*RNRVSTLLPSG
Trigger: CCCTGAGGGCAACAAGGTGCTGACCCTGTTCCGCAAGGCGTTTGACCAGCGTCTCACCTTCACTATCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000550300.1
ENST00000551632.1
CDS CAA 90 bp CGATGTCCTTCAGTCATCTGTGATACCCTTCGCTCTCAGCTCCTCTaGCACCCGGGTCAGGTAGGTGGGGTCTGGGTACCCAAACAGCTG +
Preference number: 6 (lower is better)
Translates to: RCPSVICDTLRSQLL*HPGQVGGVWVPKQL
Trigger: CAGCTGTTTGGGTACCCAGACCCCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAGGGTATCACAGATGACTGAAGGACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS TCA 72 bp CACCTGCAGAGCCCGGGTGATGCAGCCCTCGCAGAATaGATGCCGGCACTTCTCCAATGTCTTGGCATTCTG +
Preference number: 6 (lower is better)
Translates to: HLQSPGDAALAE*MPALLQCLGIL
Trigger: CAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGGCTGCATCACCCGGGCTCTGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp CACAGTCACTTTGTTCTTGCAGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAACGACACTGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: HSHFVLAGASTG*HSGQDERHCPQ
Trigger: CTGGGGGCAGTGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548478.1
CDS CCA 72 bp AACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTGGTaGATGTCGTTCCAGGTGATGACATTCGGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: NSWGPPVQLVLW*MSFQVMTFGLP
Trigger: AGGGAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CCA 72 bp CCAAACAGCTGGGGTCCCCCTGTGCAGCTGGTCTTGTaGTGGATGTCGTTCCAGGTGATGACATTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: PNSWGPPVQLVL*WMSFQVMTFGL
Trigger: GAGACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CAA 72 bp GGTTCTCTCCAGTTAGGAGGCTCCGTGAGCGAGGGGTaGGTGGGTCCCTCAGTGGAAATGGAACAAAGGGGA +
Preference number: 6 (lower is better)
Translates to: GSLQLGGSVSEG*VGPSVEMEQRG
Trigger: TCCCCTTTGTTCCATTTCCACTGAGGGACCCACCAACCCCTCGCTCACGGAGCCTCCTAACTGGAGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS CAA 90 bp TTGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCTGCCATTCTGGACAGGACGAACGAC +
Preference number: 6 (lower is better)
Translates to: LLRKSHTGLDTVTLF*QVPPQAAILDRTND
Trigger: GTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS CAA 90 bp GTCTCTTTGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCACAGGCTGCCATTCTGGACAGGACG +
Preference number: 6 (lower is better)
Translates to: VSLLRKSHTGLDTVT*FLQVPPQAAILDRT
Trigger: CGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS CAA 90 bp TTTGGAAGTGGTTCTCTCCAGTTAGGAGGCTCCGTGAGCGAGGGGTaGGTGGGTCCCTCAGTGGAAATGGAACAAAGGGGAGGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: FGSGSLQLGGSVSEG*VGPSVEMEQRGGAK
Trigger: CTTGGCTCCTCCCCTTTGTTCCATTTCCACTGAGGGACCCACCAACCCCTCGCTCACGGAGCCTCCTAACTGGAGAGAACCACTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550300.1
CDS TCA 72 bp GCTGGAGAACATAGATGTCAGAAGTCTCGCCATCTATaGGGATGGACACACGGTGCTCCTCCCGAAGCCGGG +
Preference number: 6 (lower is better)
Translates to: AGEHRCQKSRHL*GWTHGAPPEAG
Trigger: CCCGGCTTCGGGAGGAGCACCGTGTGTCCATCCTCATAGATGGCGAGACTTCTGACATCTATGTTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp ACACGGGCTTGGACACAGTCACTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTCTGGACAGGACGAACG +
Preference number: 6 (lower is better)
Translates to: TRAWTQSLCSCR*LHRLPFWTGRT
Trigger: CGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS GCA 72 bp AGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTGCCATTCTGGACAGGA +
Preference number: 6 (lower is better)
Translates to: SPTRAWTQSLCS*RCLHRLPFWTG
Trigger: TCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS GCA 72 bp AACCCTAGAGTCTCAGCCCATACAGTCTATCCGCGATaGAACACTTCTCTCCCCATCACGGGGGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: NPRVSAHTVYPR*NTSLPITGDPG
Trigger: TCCTGGGTCCCCCGTGATGGGGAGAGAAGTGTTGCATCGCGGATAGACTGTATGGGCTGAGACTCTAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000548198.5
ENST00000548478.1
ENST00000549583.5
CDS CCA 72 bp CTGGGGTCTCTTTGCTCAGGAAGTCCCACACGGGCTTaGACACAGTCACTTTGTTCTTGCAGGTGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: LGSLCSGSPTRA*TQSLCSCRCLH
Trigger: GTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAAAGAGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
ENST00000551835.5
CDS CAA 72 bp AAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCTGCCATTCTGGACAGG +
Preference number: 6 (lower is better)
Translates to: KSHTGLDTVTLF*QVPPQAAILDR
Trigger: CCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS CAA 72 bp CTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCACAGGCTGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: LRKSHTGLDTVT*FLQVPPQAAIL
Trigger: CAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000551835.5
CDS CAA 72 bp GCTGGGGTCTCTTTGCTCAGGAAGTCCCACACGGGCTaGGACACAGTCACTTTGTTCTTGCAGGTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: AGVSLLRKSHTG*DTVTLFLQVPP
Trigger: TGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAAAGAGACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
ENST00000551835.5
CDS CAA 72 bp CCCTCGCAGAATGAATGCCGGCACTTCTCCAATGTCTaGGCATTCTGGATCTCCCCCAGACAGATGGGGCAG +
Preference number: 6 (lower is better)
Translates to: PSQNECRHFSNV*AFWISPRQMGQ
Trigger: CTGCCCCATCTGTCTGGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATTCTGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS CAA 72 bp TACCCAAACAGCTGGGGTCCCCCTGTGCAGCTGGTCTaGTGGTGGATGTCGTTCCAGGTGATGACATTCGGT +
Preference number: 6 (lower is better)
Translates to: YPNSWGPPVQLV*WWMSFQVMTFG
Trigger: ACCGAATGTCATCACCTGGAACGACATCCACCACAAGACCAGCTGCACAGGGGGACCCCAGCTGTTTGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551632.1
CDS CCA 72 bp AATGAATGCCGGCACTTCTCCAATGTCTTGGCATTCTaGATCTCCCCCAGACAGATGGGGCAGGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: NECRHFSNVLAF*ISPRQMGQVLS
Trigger: GGAGAGCACCTGCCCCATCTGTCTGGGGGAGATCCAGAATGCCAAGACATTGGAGAAGTGCCGGCATTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS TCA 72 bp TCTTCAGCTCTTTCTCTGCCTCTTTTAGCAGCCCCTTaGGAGCCTTCCGGGCTAGGTAGAGCCCATTTGGAG +
Preference number: 6 (lower is better)
Translates to: SSALSLPLLAAP*EPSGLGRAHLE
Trigger: CTCCAAATGGGCTCTACCTAGCCCGGAAGGCTCTCAAGGGGCTGCTAAAAGAGGCAGAGAAAGAGCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp AGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTTaGAGGTGCCTCCACAGGCTGCCATTTTTGATCCTG +
Preference number: 6 (lower is better)
Translates to: SPTRAWTQSLCS*RCLHRLPFLIL
Trigger: CAGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS CCA 72 bp AGGTGGAGGTCTTCTTGCCACCTCCCTCAGATCACATaGACCGGAATATTTCCTATGCTCCCCAACTCCTCG +
Preference number: 6 (lower is better)
Translates to: RWRSSCHLPQIT*TGIFPMLPNSS
Trigger: CGAGGAGTTGGGGAGCATAGGAAATATTCCGGTCCATGTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CAA 72 bp CTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCACAGGCTGCCATTTTT +
Preference number: 6 (lower is better)
Translates to: LRKSHTGLDTVT*FLQVPPQAAIF
Trigger: AAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp CACAGTCACTTTGTTCTTGCAGGTGCCTCCACAGGCTaGCATTCTGGACAGGACGAACGACATTTGATCCTG +
Preference number: 6 (lower is better)
Translates to: HSHFVLAGASTG*HSGQDERHLIL
Trigger: CAGGATCAAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS GCA 72 bp ACACGGGCTTGGACACAGTCACTTTGTTCTTGCAGGTaGCTCCACAGGCTGCCATTTTTGATCCTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: TRAWTQSLCSCR*LHRLPFLILKS
Trigger: GCTCTTCAGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp TTTCCTATGCTCCCCAACTCCTCGCCTGCTCCACATTaGCAAATAATTCAGCCCCTATTGCCAGGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: FPMLPNSSPAPH*QIIQPLLPGSL
Trigger: AAGGCTCCCTGGCAATAGGGGCTGAATTATTTGGCAATGTGGAGCAGGCGAGGAGTTGGGGAGCATAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS GCA 72 bp ACCTCCCTCAGATCACATGGACCGGAATATTTCCTATaGTCCCCAACTCCTCGCCTGCTCCACATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: TSLRSHGPEYFL*SPTPRLLHIAK
Trigger: TTTGGCAATGTGGAGCAGGCGAGGAGTTGGGGAGCATAGGAAATATTCCGGTCCATGTGATCTGAGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CAA 72 bp AAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCTGCCATTTTTGATCCT +
Preference number: 6 (lower is better)
Translates to: KSHTGLDTVTLF*QVPPQAAIFDP
Trigger: AGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS CAA 90 bp TTGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTTGTTCTaGCAGGTGCCTCCACAGGCTGCCATTTTTGATCCTGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LLRKSHTGLDTVTLF*QVPPQAAIFDPEEL
Trigger: AAGCTCTTCAGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS CAA 90 bp GTCTCTTTGCTCAGGAAGTCCCACACGGGCTTGGACACAGTCACTTaGTTCTTGCAGGTGCCTCCACAGGCTGCCATTTTTGATCCTGAA +
Preference number: 6 (lower is better)
Translates to: VSLLRKSHTGLDTVT*FLQVPPQAAIFDPE
Trigger: TTCAGGATCAAAAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAGTGACTGTGTCCAAGCCCGTGTGGGACTTCCTGAGCAAAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS CAA 90 bp AGGTGCCTCCACAGGCTGCCATTTTTGATCCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGTAGG +
Preference number: 6 (lower is better)
Translates to: RCLHRLPFLILKSLE*ACRLTLLSLLPTCR
Trigger: CCTACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAAAATGGCAGCCTGTGGAGGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp GACCGGAATATTTCCTATGCTCCCCAACTCCTCGCCTaGTCCACATTGCCAAATAATTCAGCCCCTATTGCC +
Preference number: 6 (lower is better)
Translates to: DRNISYAPQLLA*STLPNNSAPIA
Trigger: GGCAATAGGGGCTGAATTATTTGGCAATGTGGAGCAGGCGAGGAGTTGGGGAGCATAGGAAATATTCCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS GCA 72 bp CAGGAAAGAAAACGCCCACACAGGTGGAGGTCTTCTTaGCACCTCCCTCAGATCACATGGACCGGAATATTT +
Preference number: 6 (lower is better)
Translates to: QERKRPHRWRSS*HLPQITWTGIF
Trigger: AAATATTCCGGTCCATGTGATCTGAGGGAGGTGGCAAGAAGACCTCCACCTGTGTGGGCGTTTTCTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CCA 72 bp CTTTGTTCTTGCAGGTGCCTCCACAGGCTGCCATTCTaGACAGGACGAACGACATTTGATCCTGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LCSCRCLHRLPF*TGRTTFDPEEL
Trigger: AAGCTCTTCAGGATCAAATGTCGTTCGTCCTGTCCAGAATGGCAGCCTGTGGAGGCACCTGCAAGAACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS CAA 72 bp CAGGACGAACGACATTTGATCCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTTCTTTCCCTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: QDERHLILKSLE*ACRLTLLSLLP
Trigger: AGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAATGTCGTTCGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS CAA 72 bp CACAGGCTGCCATTTTTGATCCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTTCTTTCCCTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: HRLPFLILKSLE*ACRLTLLSLLP
Trigger: AGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAAAATGGCAGCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS CAA 72 bp CCAAATAATTCAGCCCCTATTGCCAGGGAGCCTTCCTaGAGAGCTAACTCAGTCCCTTCTGCTGAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: PNNSAPIAREPS*RANSVPSAEVC
Trigger: ACAGACTTCAGCAGAAGGGACTGAGTTAGCTCTCAAGGAAGGCTCCCTGGCAATAGGGGCTGAATTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CAA 90 bp CATTCTGGACAGGACGAACGACATTTGATCCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGTAGG +
Preference number: 6 (lower is better)
Translates to: HSGQDERHLILKSLE*ACRLTLLSLLPTCR
Trigger: CCTACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAATGTCGTTCGTCCTGTCCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS TCA 72 bp CTTGTAGGTCGTGTGACCTGGAAAGCCCATGGAAGATaGTGGCAGCAGAAATCCTTCTATTTCCACTCAGCT +
Preference number: 6 (lower is better)
Translates to: LVGRVTWKAHGR*WQQKSFYFHSA
Trigger: AGCTGAGTGGAAATAGAAGGATTTCTGCTGCCATCATCTTCCATGGGCTTTCCAGGTCACACGACCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548478.1
ENST00000548804.5
ENST00000549583.5
ENST00000550596.5
ENST00000551632.1
ENST00000551835.5
CDS TCA 72 bp CAAATAATTCAGCCCCTATTGCCAGGGAGCCTTCCTTaGGAGCTAACTCAGTCCCTTCTGCTGAAGTCTGTT +
Preference number: 6 (lower is better)
Translates to: QIIQPLLPGSLP*ELTQSLLLKSV
Trigger: AACAGACTTCAGCAGAAGGGACTGAGTTAGCTCTCAAGGAAGGCTCCCTGGCAATAGGGGCTGAATTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548198.5
ENST00000548478.1
CDS CAA 90 bp CTTTGCCCCTCCTTTTTGCTTACTTTGATCCTGAAGAGCTTAGAATaGGCATGCAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGTAGG +
Preference number: 6 (lower is better)
Translates to: LCPSFLLTLILKSLE*ACRLTLLSLLPTCR
Trigger: CCTACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAAGTAAGCAAAAAGGAGGGGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548478.1
CDS TCA 72 bp ACAGAAAGAAGGGCCATTAGTGTGACCTCCATTTATTaGCTGATCCAAGAAGGAGCAGCTGTCCCTTCATGC +
Preference number: 6 (lower is better)
Translates to: TERRAISVTSIY*LIQEGAAVPSC
Trigger: GCATGAAGGGACAGCTGCTCCTTCTTGGATCAGTCAATAAATGGAGGTCACACTAATGGCCCTTCTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548198.5
ENST00000548478.1
ENST00000549583.5
CDS GCA 72 bp GAACGACATTTGATCCTGAAGAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGT +
Preference number: 6 (lower is better)
Translates to: ERHLILKSLELA*RLTLLSLLPTC
Trigger: ACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAATGTCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337737.8
ENST00000548198.5
ENST00000548804.5
ENST00000551835.5
CDS GCA 72 bp CTGCCATTTTTGATCCTGAAGAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGT +
Preference number: 6 (lower is better)
Translates to: LPFLILKSLELA*RLTLLSLLPTC
Trigger: ACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAAAATGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549583.5
ENST00000551632.1
CDS GCA 72 bp TTGCTTACTTTGATCCTGAAGAGCTTAGAATTGGCATaGAGGCTCACTCTTCTTTCCCTGCTCCCTACTTGT +
Preference number: 6 (lower is better)
Translates to: LLTLILKSLELA*RLTLLSLLPTC
Trigger: ACAAGTAGGGAGCAGGGAAAGAAGAGTGAGCCTGCATGCCAATTCTAAGCTCTTCAGGATCAAAGTAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548478.1
CDS CAA 90 bp AAAAAGTTTCCAGAGCTATATTATCATCTAAGCCAAGTATCAGTCTaGTTTCTCCTGTCATTTCTCCCAGATCATAGAAACAACTTGCCC +
Preference number: 6 (lower is better)
Translates to: KKFPELYYHLSQVSV*FLLSFLPDHRNNLP
Trigger: GGGCAAGTTGTTTCTATGATCTGGGAGAAATGACAGGAGAAACAAGACTGATACTTGGCTTAGATGATAATATAGCTCTGGAAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548478.1