RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DSG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000134757

Ensembl transcript IDs: ENST00000257189.5

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCTTGTTGCAGCAGCACCCCCATCTGTGGAAGCACAGGCTGCCTaGACTTCTCCAGCTGCTCTAGCACCTGACTTCCTGGTAGTCAGG +
Preference number: 1 (lower is better)
Translates to: SLVAAAPPSVEAQAA*TSPAALAPDFLVVR
Trigger: CCTGACTACCAGGAAGTCAGGTGCTAGAGCAGCTGGAGAAGTGCAGGCAGCCTGTGCTTCCACAGATGGGGGTGCTGCTGCAACAAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 90 bp GGCTGCTGCACAGGATCTAGCTTCTCCCACCTAAGATGGGCACATTaGAAGCCTTGTTGCAGCAGCACCCCCATCTGTGGAAGCACAGGC +
Preference number: 1 (lower is better)
Translates to: GCCTGSSFSHLRWAH*KPCCSSTPICGSTG
Trigger: GCCTGTGCTTCCACAGATGGGGGTGCTGCTGCAACAAGGCTTTCAATGTGCCCATCTTAGGTGGGAGAAGCTAGATCCTGTGCAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 90 bp GGATATTTAGGGGACCTCTTTCCTTCAGGACCACACCCTTCTAGGTaGAAGCACAAACACTTGATTACTTTGCATTCCATCTGCAAAAAC +
Preference number: 1 (lower is better)
Translates to: GYLGDLFPSGPHPSR*KHKHLITLHSICKN
Trigger: GTTTTTGCAGATGGAATGCAAAGTAATCAAGTGTTTGTGCTTTCACCTAGAAGGGTGTGGTCCTGAAGGAAAGAGGTCCCCTAAATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 90 bp GTGCTTTCTATGGGCAAAAGGGTGAATATCTTGAATGACCAGAAATaGCTCGAAGAGCTGCATTACTATCATGGTAGCATGCATGAAGTG +
Preference number: 1 (lower is better)
Translates to: VLSMGKRVNILNDQK*LEELHYYHGSMHEV
Trigger: CACTTCATGCATGCTACCATGATAGTAATGCAGCTCTTCGAGTCATTTCTGGTCATTCAAGATATTCACCCTTTTGCCCATAGAAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR TCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTGCGCCCGGCCCCTTGTaGTTCTTACATCATTATCAA +
Preference number: 2 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSAPGPL*FLHHYQ
Trigger: TTGATAATGATGTAAGAATCACAAGGGGCCGGGCGC...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTCAGATTTGGTCAGTGTaGTATTCCAGCTCATTCTGG +
Preference number: 2 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSQIWSV*YSSSFW
Trigger: CCAGAATGAGCTGGAATACCACACTGACCAAATCTG...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTTATAAGAAAAGGCAATaGAGACAAGAACCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSYKKRQ*RQEPAL
Trigger: GAGCGCTGGTTCTTGTCTCCATTGCCTTTTCTTATA...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTCACCAACTACTTTTCTaGAATGCTGCTTATAATACA +
Preference number: 2 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSHQLLF*NAAYNT
Trigger: TGTATTATAAGCAGCATTCCAGAAAAGTAGTTGGTG...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR TCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCATCGTGATCAGTTTATaGGAGAAGCTAATAAGTGCC +
Preference number: 2 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPIVISL*EKLISA
Trigger: GGCACTTATTAGCTTCTCTCATAAACTGATCACGAT...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCCAAGCAGCTCAAAATaGTTTAGCAAATACCTTGTG +
Preference number: 2 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPPSSSK*FSKYLV
Trigger: CACAAGGTATTTGCTAAAGCATTTTGAGCTGCTTGG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR GCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAGGAGTGACAACATATTaGTTTTGGGGTATGAACCCA +
Preference number: 2 (lower is better)
Translates to: THIWLPSTKKMEETLLQLGVTTY*FWGMNP
Trigger: TGGGTTCATACCCCAAAAGCAATATGTTGTCACTCC...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCATAAACACCTTCCTTTaGCAGGGGAAAAATAGAAGC +
Preference number: 2 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFINTFL*QGKNRS
Trigger: GCTTCTATTTTTCCCCTGCCAAAGGAAGGTGTTTAT...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR TCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAATTAGCCCAATACAGTaGGCTTTGCTATGCTATTTT +
Preference number: 2 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKISPIQ*ALLCYF
Trigger: AAAATAGCATAGCAAAGCTCACTGTATTGGGCTAAT...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTCCAAAGATCCAGATTTaGTCAGTGTGGTATTCCAGC +
Preference number: 2 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLPKIQI*SVWYSS
Trigger: GCTGGAATACCACACTGACCAAATCTGGATCTTTGG...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR CAA 90 bp AGTGCCAAATTATTAGCCCAATACAGTGAGCTTTGCTATGCTATTTaGAATACTTTAGTCCAAAGATCCAGATTTGGTCAGTGTGGTATT +
Preference number: 2 (lower is better)
Translates to: SAKLLAQYSELCYAI*NTLVQRSRFGQCGI
Trigger: AATACCACACTGACCAAATCTGGATCTTTGGACTAAAGTATTCAAAATAGCATAGCAAAGCTCACTGTATTGGGCTAATAATTTGGCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR GCA 72 bp CGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCATGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: RTADCSGAISAH*KLRFPGSCHSP
Trigger: AGGAGAATGGCATGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR GCA 72 bp GCAGCAGCACCCCCATCTGTGGAAGCACAGGCTGCCTaGACTTCTCCAGCTGCTCTAGCACCTGACTTCCTG +
Preference number: 3 (lower is better)
Translates to: AAAPPSVEAQAA*TSPAALAPDFL
Trigger: CAGGAAGTCAGGTGCTAGAGCAGCTGGAGAAGTGCAGGCAGCCTGTGCTTCCACAGATGGGGGTGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR CCA 72 bp ACATTGAAAGCCTTGTTGCAGCAGCACCCCCATCTGTaGAAGCACAGGCTGCCTGCACTTCTCCAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: TLKALLQQHPHL*KHRLPALLQLL
Trigger: GAGCAGCTGGAGAAGTGCAGGCAGCCTGTGCTTCCACAGATGGGGGTGCTGCTGCAACAAGGCTTTCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR GCA 72 bp AGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTaGACAGGATCTAGCTTCTCCCACCTAAGATGGGCA +
Preference number: 3 (lower is better)
Translates to: RAMEPPQDLPGC*TGSSFSHLRWA
Trigger: TGCCCATCTTAGGTGGGAGAAGCTAGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR GCA 72 bp GGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTaGTGCACAGGATCTAGCTTCTCCCACCTAAGATGG +
Preference number: 3 (lower is better)
Translates to: GRAMEPPQDLPG*CTGSSFSHLRW
Trigger: CCATCTTAGGTGGGAGAAGCTAGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CAA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTCCTAAGATGGGCACATaGAAAGCCTTGTTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSPKMGT*KALLQQ
Trigger: CTGCTGCAACAAGGCTTTCAATGTGCCCATCTTAGG...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 72 bp ACAGGATCTAGCTTCTCCCACCTAAGATGGGCACATTaGAAGCCTTGTTGCAGCAGCACCCCCATCTGTGGA +
Preference number: 3 (lower is better)
Translates to: TGSSFSHLRWAH*KPCCSSTPICG
Trigger: TCCACAGATGGGGGTGCTGCTGCAACAAGGCTTTCAATGTGCCCATCTTAGGTGGGAGAAGCTAGATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CAA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTGACAACATATTGCTTTaGGGGTATGAACCCAAACAT +
Preference number: 3 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSDNILL*GYEPKH
Trigger: ATGTTTGGGTTCATACCCCAAAAGCAATATGTTGTC...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 72 bp GGGGACCTCTTTCCTTCAGGACCACACCCTTCTAGGTaGAAGCACAAACACTTGATTACTTTGCATTCCATC +
Preference number: 3 (lower is better)
Translates to: GDLFPSGPHPSR*KHKHLITLHSI
Trigger: GATGGAATGCAAAGTAATCAAGTGTTTGTGCTTTCACCTAGAAGGGTGTGGTCCTGAAGGAAAGAGGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CAA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCTCCAAAGATCCAGATTaGGTCAGTGTGGTATTCCAG +
Preference number: 3 (lower is better)
Translates to: LFSKTNTGSVTETCRKELSKDPD*VSVVFQ
Trigger: CTGGAATACCACACTGACCAAATCTGGATCTTTGGA...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR-3UTR CAA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGAGGAGTGACAACATATaGCTTTTGGGGTATGAACCC +
Preference number: 3 (lower is better)
Translates to: GSVTETCRKELSVKYFLWRSDNI*LLGYEP
Trigger: GGGTTCATACCCCAAAAGCAATATGTTGTCACTCCT...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 72 bp ATGGGCAAAAGGGTGAATATCTTGAATGACCAGAAATaGCTCGAAGAGCTGCATTACTATCATGGTAGCATG +
Preference number: 3 (lower is better)
Translates to: MGKRVNILNDQK*LEELHYYHGSM
Trigger: CATGCTACCATGATAGTAATGCAGCTCTTCGAGTCATTTCTGGTCATTCAAGATATTCACCCTTTTGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR TCA 72 bp GGTGCTTTCTATGGGCAAAAGGGTGAATATCTTGAATaGCCAGAAATGACTCGAAGAGCTGCATTACTATCA +
Preference number: 3 (lower is better)
Translates to: GAFYGQKGEYLE*PEMTRRAALLS
Trigger: TGATAGTAATGCAGCTCTTCGAGTCATTTCTGGTCATTCAAGATATTCACCCTTTTGCCCATAGAAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTAGGCCCCAGCCTCCCTaGGTGCGGCCTGCCATACCT +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSRPQPP*VRPAIP
Trigger: AGGTATGGCAGGCCGCACTCAGGGAGGCTGGGGCCT...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTTCCCTGAGTGCGGCCTaGCATACCTGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSSLSAA*HTWSQG
Trigger: GCCCTGGGACCAGGTATGGCAGGCCGCACTCAGGGA...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTCCAGCCGTCTGCAGTTaGTGTCTAAGAAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSPAVCS*CLRKAL
Trigger: GAGGGCTTTTCTTAGACATCAACTGCAGACGGCTGG...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTGCAGGTGAGGTAGGGTaGTTTCTATGGGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSAGEVG*FLWAKG
Trigger: CCCTTTTGCCCATAGAAAGCACCCTACCTCACCTGC...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTGTGAAAAAGTCCAAGTaGGCCGCTGCTTCTATCCTG +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSVKKSK*AAASIL
Trigger: CAGGATAGAAGCAGCGGCTCACTTGGACTTTTTCAC...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTGTGCCTGCTGGTTCCTaGGAGACAATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSVPAGS*ETILKA
Trigger: TGCCTTCAAAATTGTCTCTCAGGAACCAGCAGGCAC...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCGCGGCCTGCCATACCTaGTCCCAGGGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFAACHT*SQGLWL
Trigger: CAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGC...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTTCTGCTGGACTTCTATaGGATGGCCACAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSSAGLL*DGHRIQ
Trigger: TTGAATCCTGTGGCCATCCCATAGAAGTCCAGCAGA...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCCCAGCCTCCCTGAGTaGGGCCTGCCATACCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWPSLPE*GLPYLV
Trigger: GACCAGGTATGGCAGGCCGCACTCAGGGAGGCTGGG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTGTGACCCTCGTAGCTaGGTTGGGCCAGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPCDPRS*VGPARL
Trigger: CAACCTAGCTGGCCCAACGCAGCTACGAGGGTCACA...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTTCTACATCTAGTCCTTaGGCATTTAGAGCCCGACAT +
Preference number: 4 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSSTSSP*AFRARH
Trigger: ATGTCGGGCTCTAAATGCCCAAGGACTAGATGTAGA...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCCAGCACCCCCATCTGTaGAAGCACAGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFQHPHL*KHRLPA
Trigger: TGCAGGCAGCCTGTGCTTCCACAGATGGGGGTGCTG...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAGGTTCCAGACTGCCCTaGGGAACAGATGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKGSRLP*GTDANS
Trigger: GGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACC...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCAGAGCGAGCCACCGTTaGGAAGCAAAGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFRASHR*EAKDSS
Trigger: GCTGCTGTCCTTTGCTTCTCAACGGTGGCTCGCTCT...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAGTCCAAGTGAGCCGCTaGTTCTATCCTGCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKVQVSR*FYPASR
Trigger: ACGGCTGGCAGGATAGAAGCAGCGGCTCACTTGGAC...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCCCTGCAGTGGAAGGTTaGACGAGGGAACCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFPAVEG*TREPEA
Trigger: GGCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGG...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTGTGATCAGGAAGCTTaGAGTTTCCTCCCGGTCGAC +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPCDQEA*SFLPVD
Trigger: GTCGACCGGGAGGAAACTCCAAGCTTCCTGATCACA...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCCCGCTGCTTCTATCCTaGCAGCCGTCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELPLLLS*QPSAVD
Trigger: ATCAACTGCAGACGGCTGGCAGGATAGAAGCAGCGG...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAATGCTTAGGAGGAACATaGGTGTGCCTGCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKCLGGT*VCLLVP
Trigger: AGGAACCAGCAGGCACACCCATGTTCCTCCTAAGCA...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGGAGGTATCTGTTCCTaGGCTCTGAGGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLGGICS*ALRRAE
Trigger: CTCGGCCCTCCTCAGAGCCCAGGAACAGATACCTCC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCAGCGTAGTCCTTATTaGTTCCTCCAGTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPQRSPY*FLQWNA
Trigger: GGCATTCCACTGGAGGAACCAATAAGGACTACGCTG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCCACAGGAGAACCAGTaGCATCTGCGCCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPPQENQ*HLRLHY
Trigger: ATAATGAAGGCGCAGATGCCACTGGTTCTCCTGTGG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGGGAGGAGCACCAGGGTaGGGGATATTTAGGGGACCT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRGGAPG*GIFRGP
Trigger: AGGTCCCCTAAATATCCCCCACCCTGGTGCTCCTCC...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAATTCCAAAAGGCGGCTaGTCGATTCCCACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAIPKGG*SIPTPE
Trigger: CTCTGGAGTGGGAATCGATCAGCCGCCTTTTGGAAT...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAGGTCATTTCCATTCCTaGAGTGCCTTCCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAGHFHS*SAFHRC
Trigger: ACAGCGGTGGAAGGCACTTCAGGAATGGAAATGACC...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAGCGCCCGGCCCCTTGTaGTTCTTACATCATTATCAA +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKAPGPL*FLHHYQ
Trigger: TTGATAATGATGTAAGAATCACAAGGGGCCGGGCGC...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCCTCTGCAGCGTCTCTaGTGCTTTCCGAAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRPLQRL*CFPKES
Trigger: AGACTCCTTCGGAAAGCAGCAGAGACGCTGCAGAGG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAACTTCCCCAGTGTTTCTaGTTAGGAGGAACATGGGTG +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKLPQCF*LGGTWV
Trigger: CACCCATGTTCCTCCTAAGCAGAAACACTGGGGAAG...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTCTCCATCTTTGTCTaGACCACTCACAACCAGACG +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPFSIFV*TTHNQT
Trigger: CGTCTGGTTGTGAGTGGTGCAGACAAAGATGGAGAA...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCCTTCCAGTGTCAAGCTaGGTGGCATCTCACACCGAT +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELLPVSS*VASHTD
Trigger: ATCGGTGTGAGATGCCACGCAGCTTGACACTGGAAG...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCTGCCTTCCACCGCTGTaGCTCTGGCATACGTATTTG +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELCLPPL*LWHTYL
Trigger: CAAATACGTATGCCAGAGGCACAGCGGTGGAAGGCA...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCATTTCCATTCCTGAAGTaGCTTCCACCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAFPFLK*LPPLCL
Trigger: GAGGCACAGCGGTGGAAGGCACTTCAGGAATGGAAA...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCAACAAGCAGTCATTTaGTTCCTGGCCATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPQQAVI*FLAIVF
Trigger: GAAGACGATGGCCAGGAAGCAAATGACTGCTTGTTG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAAAGTGGATCAAAGCCTaGAGTGGAAGGTTGCACGAG +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKKWIKA*SGRLHE
Trigger: CTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTT...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGGAAGCACAGGCTGCCTaGACTTCTCCAGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGREAQAA*TSPAAL
Trigger: TAGAGCAGCTGGAGAAGTGCAGGCAGCCTGTGCTTC...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTTGTGGAAGCACAGGCTaGCTGCACTTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLCGSTG*LHFSSC
Trigger: GCAGCTGGAGAAGTGCAGGCAGCCTGTGCTTCCACA...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTATGGTCCCAGGGCTTGTaGTTGGGTAAGAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLWSQGL*LGKKFH
Trigger: GTGGAACTTCTTACCCAACCACAAGCCCTGGGACCA...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCGGACAGACCCAGAGGTaGACAAAGCAGAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELGQTQR*TKQKLL
Trigger: AAGGAGCTTCTGCTTTGTCCACCTCTGGGTCTGTCC...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCGATCAAAGCCTGCAGTaGAAGGTTGCACGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELDQSLQ*KVARGN
Trigger: GTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATC...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAGGTTGCCAGGAACACTaGAAATGGGACAGATCACCC +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAGCQEH*KWDRSP
Trigger: GGGTGATCTGTCCCATTTCCAGTGTTCCTGGCAACC...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCAATTGTGACTGGGGTTaGCTGAACTCGGTATCGAGA +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFNCDWG*LNSVSR
Trigger: TCTCGATACCGAGTTCAGTCAACCCCAGTCACAATT...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCTGCAGCGTCTCTGCTaGTTTCCGAAGGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLQRLC*FPKEST
Trigger: TGTAGACTCCTTCGGAAAGCAGCAGAGACGCTGCAG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCTCATGGTTCCAGACTaGCCTGAGGAACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRLMVPD*PEEQMP
Trigger: TGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTATTGGTTCCTCCAGTaGAATGCCTTGTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPYWFLQ*NALFSW
Trigger: CCATGAGAACAAGGCATTCCACTGGAGGAACCAATA...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCAGTCATTTGCTTCCTaGCCATCGTCTTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRQSFAS*PSSSSA
Trigger: TGCGGAGGAAGACGATGGCCAGGAAGCAAATGACTG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAATGGACTTCTATGGGATaGCCACAGGATTCAATCCCA +
Preference number: 4 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKWTSMG*PQDSIP
Trigger: TGGGATTGAATCCTGTGGCCATCCCATAGAAGTCCA...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGGTGACTGGGGTTGACTaGACTCGGTATCGAGAGATA +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRVTGVD*TRYREI
Trigger: TATCTCTCGATACCGAGTTCAGTCAACCCCAGTCAC...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAAGCTCCTTGACTTCCTaGCAAAGTCTGGCACTTAAC +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLSSLTS*QSLALN
Trigger: GTTAAGTGCCAGACTTTGTCAGGAAGTCAAGGAGCT...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCTAAGAAAAGCCCTCTaGAGCGTCTCTGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLRKAL*SVSAAF
Trigger: GAAAGCAGCAGAGACGCTGCAGAGGGCTTTTCTTAG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAAGAAGTTCCACAGATaGCCCTGTTGTCACACTGAC +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELKKFHR*PCCHTD
Trigger: GTCAGTGTGACAACAGGGGCATCTGTGGAACTTCTT...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTCCCTGTTGCAAAGCCTaGAGCACCTCCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLPCCKA*STSRFS
Trigger: ACTGAATCTGGAGGTGCTGCAGGCTTTGCAACAGGG...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTGCCCTGAGGAACAGATaGCAACTCCAGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVALRNR*QLQWLL
Trigger: GAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGC...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCGGAGTGACAACATATTaGTTTTGGGGTATGAACCCA +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPGVTTY*FWGMNP
Trigger: TGGGTTCATACCCCAAAAGCAATATGTTGTCACTCC...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTCAGGACTTACCAGGCTaGTGCACAGGATCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLQDLPG*CTGSSF
Trigger: GAAGCTAGATCCTGTGCAGCAGCCTGGTAAGTCCTG...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTACCAGGGAGATGTaGTATACTCCAGGAGGTATC +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELSTREM*YTPGGI
Trigger: GATACCTCCTGGAGTATACCACATCTCCCTGGTACT...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCCCAGGGCTTGTGGTTaGGTAAGAAGTTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRPRACG*VRSSTD
Trigger: ATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTAGATGCCAACTCCAGTaGCTGCTCCGAATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLRCQLQ*LLRILK
Trigger: CTTCAGGATTCGGAGCAGCCACTGGAGTTGGCATCT...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAGCTGTCTTTAGAGGGTaGCTGAACTTCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLAVFRG*LNFFAF
Trigger: GAAGGCAAAGAAGTTCAGCCACCCTCTAAAGACAGC...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAACAAATCCTGTCTGCTaGACTTCTATGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLTNPVC*TSMGWP
Trigger: TGGCCATCCCATAGAAGTCCAGCAGACAGGATTTGT...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCAGAGATTCGGTAGGTaGTTTTCTGGGTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRQRFGR*FSGLLG
Trigger: ACCAAGCAACCCAGAAAATCACCTACCGAATCTCTG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTTAGAGCCCGACATGTaGTCAGGAAGCTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRLEPDM*SGSLEF
Trigger: AAACTCCAAGCTTCCTGATCACATGTCGGGCTCTAA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGACAACCACGGAAGGTaGAGAACTGCAAACTGCATC +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLDNHGR*RTANCI
Trigger: GATGCAGTTTGCAGTTCTTCACCTTCCGTGGTTGTC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTCACACCGATTGTTCTaGCTGTCTGTAAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRSHRLF*LSVSTR
Trigger: CCTGGTACTTACAGACAGTCAGAACAATCGGTGTGA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCATGAATTGTTCCTTCTaGGCCATCAGGAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELMNCSF*AIRNWD
Trigger: ATCCCAGTTCCTGATGGCTCAGAAGGAACAATTCAT...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGATGTCAGTAAGCAGGTaGGGTAGGGTGCTTTCTATG +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWMSVSR*GRVLSM
Trigger: CATAGAAAGCACCCTACCTCACCTGCTTACTGACAT...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTAGCTGCTCTAGCACCTaGCTTCCTGGTAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVSCSST*LPGSQG
Trigger: ACCCTGACTACCAGGAAGTCAGGTGCTAGAGCAGCT...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCACCCATTCACGTTTTTaGCTTCTTTTAGCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPTHSRF*LLLACC
Trigger: GCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGT...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTTCCCCCAGTAGAACCTaGCCCACAGTCACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVSPSRT*PTVTGQ
Trigger: TTGACCTGTGACTGTGGGGCAGGTTCTACTGGGGGA...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTCCAGATTCAGTGGCTaGTCCAAGCTTAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRSRFSG*SKLSGH
Trigger: ATGACCACTAAGCTTGGAGCAGCCACTGAATCTGGA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCTCGGTCAAGAGAATTaGTCAAAGTACGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRLGQEN*SKYGLP
Trigger: GGGAAGTCCGTACTTTGACCAATTCTCTTGACCGAG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTCAGTGTCAAGCTGCGTaGCATCTCACACCGATTGTT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLQCQAA*HLTPIV
Trigger: AACAATCGGTGTGAGATGCCACGCAGCTTGACACTG...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTAATGCCTTGTTCTCATaGTTCCAGACTGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLNALFS*FQTALR
Trigger: CCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATT...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCAGGAACACTGGAAATaGGACAGATCACCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRQEHWK*DRSPFL
Trigger: CAGAAAGGGTGATCTGTCCCATTTCCAGTGTTCCTG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCCAGATTTGGTCAGTGTaGTATTCCAGCTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELQIWSV*YSSSFW
Trigger: CCAGAATGAGCTGGAATACCACACTGACCAAATCTG...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCACCAAAGATCCAGATTTaGTCAGTGTGGTATTCCAGC +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAPKIQI*SVWYSS
Trigger: GCTGGAATACCACACTGACCAAATCTGGATCTTTGG...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAATACGTGCTGAATACTaGGAGTCTCTAAACATTGGG +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAIRAEY*ESLNIG
Trigger: CCCAATGTTTAGAGACTCTCAGTATTCAGCACGTAT...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCGGCAACTTTACAGGTTaGTCTTCCAGTGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELGNFTG*SSSANV
Trigger: TACATTTGCACTGGAAGATCAACCTGTAAAGTTGCC...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCCCCTGTTGTCACACTaGCAGACTTCCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVPLLSH*QTSSVK
Trigger: CTTGACACTGGAAGTCTGTCAGTGTGACAACAGGGG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCGGTGAATATCTTGAATaGCCAGAAATGACTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFGEYLE*PEMTRR
Trigger: TCTTCGAGTCATTTCTGGTCATTCAAGATATTCACC...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCCACACCCTTCTAGGTaGAAGCACAAACACTTGATT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRPHPSR*KHKHLI
Trigger: AATCAAGTGTTTGTGCTTTCACCTAGAAGGGTGTGG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGTTCCTCCAGTGGAATaGCTTGTTCTCATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLVPPVE*LVLMVP
Trigger: TGGAACCATGAGAACAAGGCATTCCACTGGAGGAAC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCTCCGCACAGGCAAATaGTTTCTGAGAAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLRTGK*FLRKVG
Trigger: TCCTACTTTTCTCAGAAAGCATTTGCCTGTGCGGAG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGAACCAGTGGCATCTaGGCCTTCATTATCATAGAT +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELRTSGI*AFIIID
Trigger: ATCTATGATAATGAAGGCGCAGATGCCACTGGTTCT...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGGTGGCTGAACTTCTTTaGCTTCACCATCAACACCAA +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWVAELL*LHHQHQ
Trigger: TTGGTGTTGATGGTGAAGGCAAAGAAGTTCAGCCAC...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTGACTTACCAGGCTGCTaGACAGGATCTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVDLPGC*TGSSFS
Trigger: GGAGAAGCTAGATCCTGTGCAGCAGCCTGGTAAGTC...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAATTTTGTGTGAGAAGTaGATCAAAGCCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAILCEK*IKACSG
Trigger: TCCACTGCAGGCTTTGATCCACTTCTCACACAAAAT...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCCATTTCACGGTAAATTaGGTTTTAAGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFHFTVN*VLSGKV
Trigger: AACCTTGCCGCTTAAAACCCAATTTACCGTGAAATG...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTTATTACCTGAATTGTaGCTGGGGTTGACTGAACTC +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRLLPEL*LGLTEL
Trigger: GAGTTCAGTCAACCCCAGTCACAATTCAGGTAATAA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCACTTACATTTATTACCTaGATTGTGACTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTALTFIT*IVTGVD
Trigger: GTCAACCCCAGTCACAATTCAGGTAATAAATGTAAG...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAGACATATTTGACATTTaGGGCAGCTTTGTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTADIFDI*GSFVSV
Trigger: GACACTAACAAAGCTGCCTCAAATGTCAAATATGTC...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCATTAGCCCAATACAGTaGGCTTTGCTATGCTATTTT +
Preference number: 4 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFISPIQ*ALLCYF
Trigger: AAAATAGCATAGCAAAGCTCACTGTATTGGGCTAAT...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAATCGTGATCAGTTTATaGGAGAAGCTAATAAGTGCC +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLIVISL*EKLISA
Trigger: GGCACTTATTAGCTTCTCTCATAAACTGATCACGAT...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGTTGAATGACCAGAAATaGCTCGAAGAGCTGCATTAC +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLNDQK*LEELHY
Trigger: GTAATGCAGCTCTTCGAGTCATTTCTGGTCATTCAA...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCTAAGATGGGCACATTaGAAGCCTTGTTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVLRWAH*KPCCSS
Trigger: GCTGCTGCAACAAGGCTTTCAATGTGCCCATCTTAG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCTACTTATGCCTTTTTaGACAGTAAATGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPLLMPF*TVNVLE
Trigger: TTCCAAGACATTTACTGTGCAAAAAGGCATAAGTAG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCGGAAGGTGAAGAACTaGAAACTGCATCTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRRKVKN*KLHLFR
Trigger: TCGAAAAAGATGCAGTTTGCAGTTCTTCACCTTCCG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTAGGTTGATCTTCCAGTaGAAATGTATAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLRLIFQ*KCIGAS
Trigger: ACTGGCCCCTATACATTTGCACTGGAAGATCAACCT...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTAGTCCAGAAAATTCATaGTTATCGCCCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLSPENS*LSPHQR
Trigger: ACGCTGATGGGGCGATAAGCATGAATTTTCTGGACT...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGTTAACAAATCCTGTCTaGTGGACTTCTATGGGATGG +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLTNPV*WTSMGW
Trigger: CCATCCCATAGAAGTCCAGCAGACAGGATTTGTTAA...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCCCAAGCAGCTCAAAATaGTTTAGCAAATACCTTGTG +
Preference number: 4 (lower is better)
Translates to: LFSKTNTGSVTETCRKELPSSSK*FSKYLV
Trigger: CACAAGGTATTTGCTAAAGCATTTTGAGCTGCTTGG...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCTTCCTGACAAAGTCTaGCACTTAACAAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLPDKV*HLTNPV
Trigger: GACAGGATTTGTTAAGTGCCAGACTTTGTCAGGAAG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTATAAGAAAAGGCAATaGAGACAAGAACCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRYKKRQ*RQEPAL
Trigger: GAGCGCTGGTTCTTGTCTCCATTGCCTTTTCTTATA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCAGCAGGAAGAGCAATaGAACCTCCTCAGGACTTAC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVQQEEQ*NLLRTY
Trigger: GTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGCTG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTTCTTTAGAGGGTGGCTaGACTTCTTTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVSLEGG*TSLPSP
Trigger: TGGTGAAGGCAAAGAAGTTCAGCCACCCTCTAAAGA...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTAAAGCAGAAGCTCCTTaGCTTCCTGACAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVKAEAP*LPDKVW
Trigger: CCAGACTTTGTCAGGAAGTCAAGGAGCTTCTGCTTT...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTCTATCACATTTTGTGTaGGAAGTGGATCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLLSHFV*EVDQSL
Trigger: CAGGCTTTGATCCACTTCTCACACAAAATGTGATAG...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCACTGATAATGATCTTGTaGTCAGCTAAGACAATGTCA +
Preference number: 4 (lower is better)
Translates to: KDTYMASQHQEDGRNSTALIMIL*SAKTMS
Trigger: TGACATTGTCTTAGCTGATCACAAGATCATTATCAG...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGGAAGCAGGACGGAATaGAATTCCTTCTCTTACATT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLGSRTE*NSFSYI
Trigger: AATGTAAGAGAAGGAATTGCATTCCGTCCTGCTTCC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTTCGAGGACAGCTGTTaGACAATTGTCATTGAAATC +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRFEDSC*TIVIEI
Trigger: GATTTCAATGACAATTGTCCAACAGCTGTCCTCGAA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCCACCGCTGTGCCTCTaGCATACGTATTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVPPLCL*HTYLYK
Trigger: TTTGTACAAATACGTATGCCAGAGGCACAGCGGTGG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTATTCGCAATTCTCCATaGACCAATATGACCACCACG +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVIRNSP*TNMTTT
Trigger: CGTGGTGGTCATATTGGTTCATGGAGAATTGCGAAT...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGGCACACAAATATTTGTaGTTTCCTTGTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRAHKYL*FPCLQD
Trigger: ATCCTGAAGACAAGGAAATCACAAATATTTGTGTGC...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGGAAAGCACAAACACTTaGTTACTTTGCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWESTNT*LLCIPS
Trigger: AGATGGAATGCAAAGTAATCAAGTGTTTGTGCTTTC...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTATAAACACCTTCCTTTaGCAGGGGAAAAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLINTFL*QGKNRS
Trigger: GCTTCTATTTTTCCCCTGCCAAAGGAAGGTGTTTAT...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACACCAACTACTTTTCTaGAATGCTGCTTATAATACA +
Preference number: 4 (lower is better)
Translates to: THIWLPSTKKMEETLLQLHQLLF*NAAYNT
Trigger: TGTATTATAAGCAGCATTCCAGAAAAGTAGTTGGTG...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTGGTTGCTTGGTAATCTaGAGTAATCTTGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVGCLVI*SNLGNW
Trigger: CCAATTGCCAAGATTACTTCAGATTACCAAGCAACC...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR TCA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGTATCGAGAGATAACTaGTTGGTGAAATTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLVSRDN*LVKFSF
Trigger: AAAGCTGAATTTCACCAATCAGTTATCTCTCGATAC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCTTCTTTTAGCTTGTTaGATAGTCATCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSVTETCRKELSVKYFLWLLLAC*IVISSS
Trigger: TGAAGAAGAGATGACTATGCAACAAGCTAAAAGAAG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR GCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTGCGGCAAGGTTAAAATaGTTTGAGGATCCTGAATAC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVAARLK*FEDPEY
Trigger: GTATTCAGGATCCTCAAAGCATTTTAACCTTGCCGC...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CCA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTAGAGTCTCTAAACATTaGGAAGTTATCGTTGACATC +
Preference number: 4 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVRVSKH*EVIVDI
Trigger: GATGTCAACGATAACTTCCCAATGTTTAGAGACTCT...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
3UTR CAA 72 bp TTATTAGCCCAATACAGTGAGCTTTGCTATGCTATTTaGAATACTTTAGTCCAAAGATCCAGATTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLAQYSELCYAI*NTLVQRSRFGQ
Trigger: CTGACCAAATCTGGATCTTTGGACTAAAGTATTCAAAATAGCATAGCAAAGCTCACTGTATTGGGCTAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp TTCTCATGGTTCCAGACTGCCCTGAGGAACAGATGCCAACTCCAGTaGCTGCTCCGAATCCTGAAGCAGCTCCTGACACTGTCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FSWFQTALRNRCQLQ*LLRILKQLLTLSLL
Trigger: CAACAGGGACAGTGTCAGGAGCTGCTTCAGGATTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp CATACCTGGTCCCAGGGCTTGTGGTTGGGTAAGAAGTTCCACAGATaGCCCTGTTGTCACACTGACAGACTTCCAGTGTCAAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: HTWSQGLWLGKKFHR*PCCHTDRLPVSSCV
Trigger: CACGCAGCTTGACACTGGAAGTCTGTCAGTGTGACAACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp TGGAATGCCTTGTTCTCATGGTTCCAGACTGCCCTGAGGAACAGATaGCAACTCCAGTGGCTGCTCCGAATCCTGAAGCAGCTCCTGACA +
Preference number: 5 (lower is better)
Translates to: WNALFSWFQTALRNR*QLQWLLRILKQLLT
Trigger: TGTCAGGAGCTGCTTCAGGATTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp CAGCGTAGTCCTTATTGGTTCCTCCAGTGGAATGCCTTGTTCTCATaGTTCCAGACTGCCCTGAGGAACAGATGCCAACTCCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QRSPYWFLQWNALFS*FQTALRNRCQLQWL
Trigger: CAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 90 bp ACAGCTGGCTGGACAGACCCAGAGGTGGACAAAGCAGAAGCTCCTTaGCTTCCTGACAAAGTCTGGCACTTAACAAATCCTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TAGWTDPEVDKAEAP*LPDKVWHLTNPVCW
Trigger: CCAGCAGACAGGATTTGTTAAGTGCCAGACTTTGTCAGGAAGTCAAGGAGCTTCTGCTTTGTCCACCTCTGGGTCTGTCCAGCCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp TTATTGGTTCCTCCAGTGGAATGCCTTGTTCTCATGGTTCCAGACTaGCCTGAGGAACAGATGCCAACTCCAGTGGCTGCTCCGAATCCT +
Preference number: 5 (lower is better)
Translates to: LLVPPVECLVLMVPD*PEEQMPTPVAAPNP
Trigger: AGGATTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp GATGCCCCTGTTGTCACACTGACAGACTTCCAGTGTCAAGCTGCGTaGCATCTCACACCGATTGTTCTGACTGTCTGTAAGTACCAGGGA +
Preference number: 5 (lower is better)
Translates to: DAPVVTLTDFQCQAA*HLTPIVLTVCKYQG
Trigger: TCCCTGGTACTTACAGACAGTCAGAACAATCGGTGTGAGATGCCACGCAGCTTGACACTGGAAGTCTGTCAGTGTGACAACAGGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp GTGACCCTCGTAGCTGCGTTGGGCCAGCTAGGTTGCCAGGAACACTaGAAATGGGACAGATCACCCTTTCTGTCACTATCACATTTTGTG +
Preference number: 5 (lower is better)
Translates to: VTLVAALGQLGCQEH*KWDRSPFLSLSHFV
Trigger: CACAAAATGTGATAGTGACAGAAAGGGTGATCTGTCCCATTTCCAGTGTTCCTGGCAACCTAGCTGGCCCAACGCAGCTACGAGGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp GCAGGAAGAGCAATGGAACCTCCTCAGGACTTACCAGGCTGCTGCACAGGATCTTCTCGGTCAAGAGAATaGGTCAAAGTACGGACTTCC +
Preference number: 5 (lower is better)
Translates to: AGRAMEPPQDLPGCCTGSSRSRE*VKVRTS
Trigger: GGAAGTCCGTACTTTGACCAATTCTCTTGACCGAGA...AGATCCTGTGCAGCAGCCTGGTAAGTCCTGAGGAGGTTCCATTGCTCTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 90 bp CAGACTTCCAGTGTCAAGCTGCGTGGCATCTCACACCGATTGTTCTaGCTGTCTGTAAGTACCAGGGAGATGTGGTATACTCCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: QTSSVKLRGISHRLF*LSVSTREMWYTPGG
Trigger: ACCTCCTGGAGTATACCACATCTCCCTGGTACTTACAGACAGTCAGAACAATCGGTGTGAGATGCCACGCAGCTTGACACTGGAAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp TCATGCTTATCGCCCCATCAGCGTAGTCCTTATTGGTTCCTCCAGTaGAATGCCTTGTTCTCATGGTTCCAGACTGCCCTGAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: SCLSPHQRSPYWFLQ*NALFSWFQTALRNR
Trigger: TCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTGATGGGGCGATAAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCGCCTGCAGTGGAAGGTaGCACGAGGGAACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFACSGR*HEGTRS
Trigger: GCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGGC...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACCCTCGTAGCTGCGTaGGGCCAGCTAGGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: KDTYMASQHQEDGRNSTATLVAA*GQLGCQ
Trigger: CTGGCAACCTAGCTGGCCCAACGCAGCTACGAGGGT...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 90 bp TCCAGATTCAGTGGCTGCTCCAAGCTTAGTGGTCATTTCCATTCCTaGAGTGCCTTCCACCGCTGTGCCTCTGGCATACGTATTTGTACA +
Preference number: 5 (lower is better)
Translates to: SRFSGCSKLSGHFHS*SAFHRCASGIRICT
Trigger: TGTACAAATACGTATGCCAGAGGCACAGCGGTGGAAGGCACTTCAGGAATGGAAATGACCACTAAGCTTGGAGCAGCCACTGAATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp GGGATGGCCACAGGATTCAATCCCATAACCGCTGTCTTTAGAGGGTaGCTGAACTTCTTTGCCTTCACCATCAACACCAAGGCTTATCTC +
Preference number: 5 (lower is better)
Translates to: GMATGFNPITAVFRG*LNFFAFTINTKAYL
Trigger: GAGATAAGCCTTGGTGTTGATGGTGAAGGCAAAGAAGTTCAGCCACCCTCTAAAGACAGCGGTTATGGGATTGAATCCTGTGGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp GGGACAGATCACCCTTTCTGTCACTATCACATTTTGTGTGAGAAGTaGATCAAAGCCTGCAGTGGAAGGTTGCACGAGGGAACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GTDHPFCHYHILCEK*IKACSGRLHEGTRS
Trigger: GCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAAAATGTGATAGTGACAGAAAGGGTGATCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp CCTTTCTGTCACTATCACATTTTGTGTGAGAAGTGGATCAAAGCCTaGAGTGGAAGGTTGCACGAGGGAACCAGAAGCCGAGTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: PFCHYHILCEKWIKA*SGRLHEGTRSRVSL
Trigger: GAGACTTACTCGGCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAAAATGTGATAGTGACAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp AGTCCAGAAAATTCATGCTTATCGCCCCATCAGCGTAGTCCTTATTaGTTCCTCCAGTGGAATGCCTTGTTCTCATGGTTCCAGACTGCC +
Preference number: 5 (lower is better)
Translates to: SPENSCLSPHQRSPY*FLQWNALFSWFQTA
Trigger: GGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTGATGGGGCGATAAGCATGAATTTTCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCGCCAGCCGTCTGCAGTaGATGTCTAAGAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPASRLQ*MSKKSP
Trigger: AGGGCTTTTCTTAGACATCAACTGCAGACGGCTGGC...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCACCTGGTCCCAGGGCTaGTGGTTGGGTAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFTWSQG*WLGKKF
Trigger: GAACTTCTTACCCAACCACAAGCCCTGGGACCAGGT...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 90 bp TGGAAATGGGACAGATCACCCTTTCTGTCACTATCACATTTTGTGTaGGAAGTGGATCAAAGCCTGCAGTGGAAGGTTGCACGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: WKWDRSPFLSLSHFV*EVDQSLQWKVARGN
Trigger: GTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAAAATGTGATAGTGACAGAAAGGGTGATCTGTCCCATTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp ATCATTGTCTCTGATTTCCCTGGTGAAAAAGTCCAAGTGAGCCGCTaGTTCTATCCTGCCAGCCGTCTGCAGTTGATGTCTAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: IIVSDFPGEKVQVSR*FYPASRLQLMSKKS
Trigger: GCTTTTCTTAGACATCAACTGCAGACGGCTGGCAGGATAGAAGCAGCGGCTCACTTGGACTTTTTCACCAGGGAAATCAGAGACAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAAGTCCTTCTCCATCTTaGTCTGCACCACTCACAACC +
Preference number: 5 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKSPSPS*SAPLTT
Trigger: GGTTGTGAGTGGTGCAGACAAAGATGGAGAAGGACT...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAATGAAATCGGCTCCATaGGCTGTTACAGGAGGCACA +
Preference number: 5 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKMKSAP*AVTGGT
Trigger: TGTGCCTCCTGTAACAGCCAATGGAGCCGATTTCAT...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGGTTGGGCCAGCTAGGTaGCCAGGAACACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRVGPAR*PGTLEM
Trigger: CATTTCCAGTGTTCCTGGCAACCTAGCTGGCCCAAC...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCCGTCCCATGACATATTaGACATTTGAGGCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: IWLPSTKKMEETLLQLLPRPMTY*TFEAAL
Trigger: CAAAGCTGCCTCAAATGTCAAATATGTCATGGGACG...GGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGTCCCAGGGCTTGTGGTaGGGTAAGAAGTTCCACAGA +
Preference number: 5 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRSQGLW*GKKFHR
Trigger: TCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGA...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp TACATATTCACAGATTGCCCTATGTGTTATTCTAGTCATTGGCCCGTTTTGCTTGGAAGAGCCCCATCATaGTCTCTGATTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: YIFTDCPMCYSSHWPVLLGRAPS*SLISLV
Trigger: CACCAGGGAAATCAGAGACAATGATGGGGCTCTTCC...AAGCAAAACGGGCCAATGACTAGAATAACACATAGGGCAATCTGTGAATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAAACATTTGAGGCAGCTTaGTTAGTGTCCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKTFEAA*LVSSSM
Trigger: CATCGATGAGGACACTAACAAAGCTGCCTCAAATGT...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp TGTGATACTCCATACGGCAGGCAACTTTACAGGTTGATCTTCCAGTaGAAATGTATAGGGGCCAGTGTATCTATTATTCAGTGTTCTAGC +
Preference number: 5 (lower is better)
Translates to: CDTPYGRQLYRLIFQ*KCIGASVSIIQCSS
Trigger: GCTAGAACACTGAATAATAGATACACTGGCCCCTATACATTTGCACTGGAAGATCAACCTGTAAAGTTGCCTGCCGTATGGAGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGCCTTCTCTGCAGGGTTaGGCAAATTTCACCCATTCA +
Preference number: 5 (lower is better)
Translates to: GSVTETCRKELSVKYFLWPSLQG*ANFTHS
Trigger: TGAATGGGTGAAATTTGCCAAACCCTGCAGAGAAGG...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGTGCACAGTAAATGTCTaGGAAGCAGGACGGAATGCA +
Preference number: 5 (lower is better)
Translates to: GSVTETCRKELSVKYFLWCTVNV*EAGRNA
Trigger: TGCATTCCGTCCTGCTTCCAAGACATTTACTGTGCA...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTAAGGAGTGACAACATATaGCTTTTGGGGTATGAACCC +
Preference number: 5 (lower is better)
Translates to: THIWLPSTKKMEETLLQLRSDNI*LLGYEP
Trigger: GGGTTCATACCCCAAAAGCAATATGTTGTCACTCCT...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACCATTTCACGGTAAATaGGGTTTTAAGCGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: THIWLPSTKKMEETLLQLPFHGK*GFKRQG
Trigger: ACCTTGCCGCTTAAAACCCAATTTACCGTGAAATGG...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTACTTCCCTTTTTCCCTTCTTTTAGCTTGTaGCATAGTCATCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LPSTKKMEETLLQLLPFFPSFSL*HSHLFF
Trigger: GAAGAAGAGATGACTATGCAACAAGCTAAAAGAAGG...GAAAAAGGGAAGTAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CCACCGCGCCCGGCCCCTTGTGATTCTTACATCATTATCAATGATATAAGAAAATCATCACCAGTGAGTTaGAGGCACTATTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PPRPAPCDSYIIINDIRKSSPVS*RHYFLQ
Trigger: TTGAAGAAAATAGTGCCTCAAACTCACTGGTGATGA...TTTTCTTATATCATTGATAATGATGTAAGAATCACAAGGGGCCGGGCGCGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTAGGGCCGAGGTAGCATaGAGGGTTGTGATACTCCAT +
Preference number: 5 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVRAEVA*RVVILH
Trigger: ATGGAGTATCACAACCCTCAATGCTACCTCGGCCCT...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCATATTTGTGATTTCCTaGTCTTCAGGATGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LFSKTNTGSVTETCRKELIFVIS*SSGWAP
Trigger: AGGAGCCCATCCTGAAGACAAGGAAATCACAAATAT...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 90 bp AAAATTTTAACCGTTAGTATAAGTGGTTTCTCTACATCTAGTCCTTaGGCATTTAGAGCCCGACATGTGATCAGGAAGCTTGGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: KILTVSISGFSTSSP*AFRARHVIRKLGVS
Trigger: GGAAACTCCAAGCTTCCTGATCACATGTCGGGCTCTAAATGCCCAAGGACTAGATGTAGAGAAACCACTTATACTAACGGTTAAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGCACCCATTCACGTTTTaGCCTTCTTTTAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRHPFTF*PSFSLL
Trigger: CAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTG...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAGTTGGACAATTGTCATaGAAATCGGGTACTCTAACA +
Preference number: 5 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAVGQLS*KSGTLT
Trigger: TGTTAGAGTACCCGATTTCAATGACAATTGTCCAAC...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ATGAGCTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGACAGCTGTTGGACAATaGTCATTGAAATCGGGTACT +
Preference number: 5 (lower is better)
Translates to: MSYFQRLTQDLLLRRVGRTAVGQ*SLKSGT
Trigger: AGTACCCGATTTCAATGACAATTGTCCAACAGCTGT...CCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCGACAACATATTGCTTTaGGGGTATGAACCCAAACAT +
Preference number: 5 (lower is better)
Translates to: LFSKTNTGSVTETCRKELDNILL*GYEPKH
Trigger: ATGTTTGGGTTCATACCCCAAAAGCAATATGTTGTC...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCCTAAGATGGGCACATaGAAAGCCTTGTTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVPKMGT*KALLQQ
Trigger: CTGCTGCAACAAGGCTTTCAATGTGCCCATCTTAGG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 90 bp TCTCCTTCTCTGCAGGGTTTGGCAAATTTCACCCATTCACGTTTTTaGCTTCTTTTAGCTTGTTGCATAGTCATCTCTTCTTCATCATAT +
Preference number: 5 (lower is better)
Translates to: SPSLQGLANFTHSRF*LLLACCIVISSSSY
Trigger: ATATGATGAAGAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAACCCTGCAGAGAAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAAGACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCATACATTCACATTGAGTaGATAGTCCTTCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: KDTYMASQHQEDGRNSTAYIHIE*IVLLHL
Trigger: AAGATGGAGAAGGACTATCAACTCAATGTGAATGTA...TGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp GGATCTGTTACTGAGACGTGTAGGAAGGAGCTCAGTGTAAAATATTTTCTTTGGGCTACTTATGCCTTTTaGCACAGTAAATGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: GSVTETCRKELSVKYFLWATYAF*HSKCLG
Trigger: TCCAAGACATTTACTGTGCAAAAAGGCATAAGTAGC...CCAAAGAAAATATTTTACACTGAGCTCCTTCCTACACGTCTCAGTAACAGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp CTATTTTCAAAGACTAACACAGGATCTGTTACTGAGACGTGTAGGAAGGAGCTCCTCTGGCATACGTATTaGTACAAACTTCAGAACTTT +
Preference number: 5 (lower is better)
Translates to: LFSKTNTGSVTETCRKELLWHTY*YKLQNF
Trigger: AAAGTTCTGAAGTTTGTACAAATACGTATGCCAGAG...GAGCTCCTTCCTACACGTCTCAGTAACAGATCCTGTGTTAGTCTTTGAAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp ACACATATATGGCTTCCCAGCACCAAGAAGATGGAAGAAACTCTACTGCAACTATGTCACTATCACATTTaGTGTGAGAAGTGGATCAAA +
Preference number: 5 (lower is better)
Translates to: THIWLPSTKKMEETLLQLCHYHI*CEKWIK
Trigger: TTTGATCCACTTCTCACACAAAATGTGATAGTGACA...TAGTTGCAGTAGAGTTTCTTCCATCTTCTTGGTGCTGGGAAGCCATATATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTTCCAAAGATCCAGATTaGGTCAGTGTGGTATTCCAG +
Preference number: 5 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVSKDPD*VSVVFQ
Trigger: CTGGAATACCACACTGACCAAATCTGGATCTTTGGA...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTTTGCCTTCTTTTAGCTaGTTGCATAGTCATCTCTTC +
Preference number: 5 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVLPSFS*LHSHLF
Trigger: GAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAA...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS-3UTR CAA 90 bp AAATGCTTTGAGGATCCTGAATACACCTTTGAACTTCAAATGAAGGTTATGGTTCTCTTCTTCATCATATaGACCTTTAGTCTCTATTCG +
Preference number: 5 (lower is better)
Translates to: KCFEDPEYTFELQMKVMVLFFII*TFSLYS
Trigger: CGAATAGAGACTAAAGGTCAATATGATGAAGAAGAG...AACCATAACCTTCATTTGAAGTTCAAAGGTGTATTCAGGATCCTCAAAGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp TCCCTGAGTGCGGCCTGCCATACCTGGTCCCAGGGCTaGTGGTTGGGTAAGAAGTTCCACAGATGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: SLSAACHTWSQG*WLGKKFHRCPC
Trigger: ACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGCACTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp GCCTCCCTGAGTGCGGCCTGCCATACCTGGTCCCAGGGCTTGTGGTaGGGTAAGAAGTTCCACAGATGCCCCTGTTGTCACACTGACAGA +
Preference number: 6 (lower is better)
Translates to: ASLSAACHTWSQGLW*GKKFHRCPCCHTDR
Trigger: TCTGTCAGTGTGACAACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGCACTCAGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp GTGCGGCCTGCCATACCTGGTCCCAGGGCTTGTGGTTaGGTAAGAAGTTCCACAGATGCCCCTGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: VRPAIPGPRACG*VRSSTDAPVVT
Trigger: TGTGACAACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp CTGAGTGCGGCCTGCCATACCTGGTCCCAGGGCTTGTaGTTGGGTAAGAAGTTCCACAGATGCCCCTGTTGT +
Preference number: 6 (lower is better)
Translates to: LSAACHTWSQGL*LGKKFHRCPCC
Trigger: ACAACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGCACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp AGTGCGGCCTGCCATACCTGGTCCCAGGGCTTGTGGTaGGGTAAGAAGTTCCACAGATGCCCCTGTTGTCAC +
Preference number: 6 (lower is better)
Translates to: SAACHTWSQGLW*GKKFHRCPCCH
Trigger: GTGACAACAGGGGCATCTGTGGAACTTCTTACCCAACCACAAGCCCTGGGACCAGGTATGGCAGGCCGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp TTCCAGACTGCCCTGAGGAACAGATGCCAACTCCAGTaGCTGCTCCGAATCCTGAAGCAGCTCCTGACACTG +
Preference number: 6 (lower is better)
Translates to: FQTALRNRCQLQ*LLRILKQLLTL
Trigger: CAGTGTCAGGAGCTGCTTCAGGATTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp GTGAGCCGCTGCTTCTATCCTGCCAGCCGTCTGCAGTaGATGTCTAAGAAAAGCCCTCTGCAGCGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: VSRCFYPASRLQ*MSKKSPLQRLC
Trigger: GCAGAGACGCTGCAGAGGGCTTTTCTTAGACATCAACTGCAGACGGCTGGCAGGATAGAAGCAGCGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp CTCCGAATCCTGAAGCAGCTCCTGACACTGTCCCTGTaGCAAAGCCTGCAGCACCTCCAGATTCAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LRILKQLLTLSL*QSLQHLQIQWL
Trigger: CAGCCACTGAATCTGGAGGTGCTGCAGGCTTTGCAACAGGGACAGTGTCAGGAGCTGCTTCAGGATTCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CCTCCAGTGGAATGCCTTGTTCTCATGGTTCCAGACTaGCCTGAGGAACAGATGCCAACTCCAGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PPVECLVLMVPD*PEEQMPTPVAA
Trigger: AGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp GTATGTGACCCTCGTAGCTGCGTTGGGCCAGCTAGGTaGCCAGGAACACTGGAAATGGGACAGATCACCCTT +
Preference number: 6 (lower is better)
Translates to: VCDPRSCVGPAR*PGTLEMGQITL
Trigger: AAGGGTGATCTGTCCCATTTCCAGTGTTCCTGGCAACCTAGCTGGCCCAACGCAGCTACGAGGGTCACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp AAAGTCCAAGTGAGCCGCTGCTTCTATCCTGCCAGCCGTCTGCAGTaGATGTCTAAGAAAAGCCCTCTGCAGCGTCTCTGCTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: KVQVSRCFYPASRLQ*MSKKSPLQRLCCFP
Trigger: CGGAAAGCAGCAGAGACGCTGCAGAGGGCTTTTCTTAGACATCAACTGCAGACGGCTGGCAGGATAGAAGCAGCGGCTCACTTGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 72 bp AGTGGCTGCTCCAAGCTTAGTGGTCATTTCCATTCCTaGAGTGCCTTCCACCGCTGTGCCTCTGGCATACGT +
Preference number: 6 (lower is better)
Translates to: SGCSKLSGHFHS*SAFHRCASGIR
Trigger: ACGTATGCCAGAGGCACAGCGGTGGAAGGCACTTCAGGAATGGAAATGACCACTAAGCTTGGAGCAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 72 bp AGTGGAATGCCTTGTTCTCATGGTTCCAGACTGCCCTaGGGAACAGATGCCAACTCCAGTGGCTGCTCCGAA +
Preference number: 6 (lower is better)
Translates to: SGMPCSHGSRLP*GTDANSSGCSE
Trigger: TTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp TTGTTCTCATGGTTCCAGACTGCCCTGAGGAACAGATaGCAACTCCAGTGGCTGCTCCGAATCCTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LFSWFQTALRNR*QLQWLLRILKQ
Trigger: CTGCTTCAGGATTCGGAGCAGCCACTGGAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp TCGCCCCATCAGCGTAGTCCTTATTGGTTCCTCCAGTaGAATGCCTTGTTCTCATGGTTCCAGACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: SPHQRSPYWFLQ*NALFSWFQTAL
Trigger: CAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTGATGGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp TCGCCCCATCAGCGTAGTCCTTATTGGTTCCTCCAGTGGAATGCCTaGTTCTCATGGTTCCAGACTGCCCTGAGGAACAGATGCCAACTC +
Preference number: 6 (lower is better)
Translates to: SPHQRSPYWFLQWNA*FSWFQTALRNRCQL
Trigger: GAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTGATGGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp CAGAGCATAGTATGTGACCCTCGTAGCTGCGTTGGGCCAGCTAGGTaGCCAGGAACACTGGAAATGGGACAGATCACCCTTTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: QSIVCDPRSCVGPAR*PGTLEMGQITLSVT
Trigger: AGTGACAGAAAGGGTGATCTGTCCCATTTCCAGTGTTCCTGGCAACCTAGCTGGCCCAACGCAGCTACGAGGGTCACATACTATGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp GTAGCTGCGTTGGGCCAGCTAGGTTGCCAGGAACACTaGAAATGGGACAGATCACCCTTTCTGTCACTATCA +
Preference number: 6 (lower is better)
Translates to: VAALGQLGCQEH*KWDRSPFLSLS
Trigger: TGATAGTGACAGAAAGGGTGATCTGTCCCATTTCCAGTGTTCCTGGCAACCTAGCTGGCCCAACGCAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp TTGTGTGAGAAGTGGATCAAAGCCTGCAGTGGAAGGTaGCACGAGGGAACCAGAAGCCGAGTAAGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: LCEKWIKACSGR*HEGTRSRVSLR
Trigger: ACGGAGACTTACTCGGCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 72 bp TCATTGTCTCTGATTTCCCTGGTGAAAAAGTCCAAGTaGGCCGCTGCTTCTATCCTGCCAGCCGTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SLSLISLVKKSK*AAASILPAVCS
Trigger: ACTGCAGACGGCTGGCAGGATAGAAGCAGCGGCTCACTTGGACTTTTTCACCAGGGAAATCAGAGACAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp TCTGATTTCCCTGGTGAAAAAGTCCAAGTGAGCCGCTaGTTCTATCCTGCCAGCCGTCTGCAGTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: SDFPGEKVQVSR*FYPASRLQLMS
Trigger: AGACATCAACTGCAGACGGCTGGCAGGATAGAAGCAGCGGCTCACTTGGACTTTTTCACCAGGGAAATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp CCTTATTGGTTCCTCCAGTGGAATGCCTTGTTCTCATaGTTCCAGACTGCCCTGAGGAACAGATGCCAACTC +
Preference number: 6 (lower is better)
Translates to: PYWFLQWNALFS*FQTALRNRCQL
Trigger: GAGTTGGCATCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp AACTGCAACAACCCACGGAGCCCACAGGAGAACCAGTaGCATCTGCGCCTTCATTATCATAGATCAACAAGC +
Preference number: 6 (lower is better)
Translates to: NCNNPRSPQENQ*HLRLHYHRSTS
Trigger: GCTTGTTGATCTATGATAATGAAGGCGCAGATGCCACTGGTTCTCCTGTGGGCTCCGTGGGTTGTTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp CAGCGTAGTCCTTATTGGTTCCTCCAGTGGAATGCCTaGTTCTCATGGTTCCAGACTGCCCTGAGGAACAGA +
Preference number: 6 (lower is better)
Translates to: QRSPYWFLQWNA*FSWFQTALRNR
Trigger: TCTGTTCCTCAGGGCAGTCTGGAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CACTATCACATTTTGTGTGAGAAGTGGATCAAAGCCTaGAGTGGAAGGTTGCACGAGGGAACCAGAAGCCGA +
Preference number: 6 (lower is better)
Translates to: HYHILCEKWIKA*SGRLHEGTRSR
Trigger: TCGGCTTCTGGTTCCCTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAAAATGTGATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 72 bp AGTGTCAAGCTGCGTGGCATCTCACACCGATTGTTCTaGCTGTCTGTAAGTACCAGGGAGATGTGGTATACT +
Preference number: 6 (lower is better)
Translates to: SVKLRGISHRLF*LSVSTREMWYT
Trigger: AGTATACCACATCTCCCTGGTACTTACAGACAGTCAGAACAATCGGTGTGAGATGCCACGCAGCTTGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS TCA 72 bp GGCTCCTTCAATTCCCCACTGATGAATTGTTCCTTCTaGGCCATCAGGAACTGGGATAAAACCACCTGTCAC +
Preference number: 6 (lower is better)
Translates to: GSFNSPLMNCSF*AIRNWDKTTCH
Trigger: GTGACAGGTGGTTTTATCCCAGTTCCTGATGGCTCAGAAGGAACAATTCATCAGTGGGGAATTGAAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CAGTTGATGTCTAAGAAAAGCCCTCTGCAGCGTCTCTaGTGCTTTCCGAAGGAGTCTACAGATGGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: QLMSKKSPLQRL*CFPKESTDGLL
Trigger: TAACAGACCATCTGTAGACTCCTTCGGAAAGCAGCAGAGACGCTGCAGAGGGCTTTTCTTAGACATCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp AACACTGGAAATGGGACAGATCACCCTTTCTGTCACTATCACATTTaGTGTGAGAAGTGGATCAAAGCCTGCAGTGGAAGGTTGCACGAG +
Preference number: 6 (lower is better)
Translates to: NTGNGTDHPFCHYHI*CEKWIKACSGRLHE
Trigger: CTCGTGCAACCTTCCACTGCAGGCTTTGATCCACTTCTCACACAAAATGTGATAGTGACAGAAAGGGTGATCTGTCCCATTTCCAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CTTCCTGACAAAGTCTGGCACTTAACAAATCCTGTCTaGTGGACTTCTATGGGATGGCCACAGGATTCAATC +
Preference number: 6 (lower is better)
Translates to: LPDKVWHLTNPV*WTSMGWPQDSI
Trigger: GATTGAATCCTGTGGCCATCCCATAGAAGTCCAGCAGACAGGATTTGTTAAGTGCCAGACTTTGTCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp AATTCATGCTTATCGCCCCATCAGCGTAGTCCTTATTaGTTCCTCCAGTGGAATGCCTTGTTCTCATGGTTC +
Preference number: 6 (lower is better)
Translates to: NSCLSPHQRSPY*FLQWNALFSWF
Trigger: GAACCATGAGAACAAGGCATTCCACTGGAGGAACCAATAAGGACTACGCTGATGGGGCGATAAGCATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp ACAGGATTCAATCCCATAACCGCTGTCTTTAGAGGGTaGCTGAACTTCTTTGCCTTCACCATCAACACCAAG +
Preference number: 6 (lower is better)
Translates to: TGFNPITAVFRG*LNFFAFTINTK
Trigger: CTTGGTGTTGATGGTGAAGGCAAAGAAGTTCAGCCACCCTCTAAAGACAGCGGTTATGGGATTGAATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CCATACGGCAGGCAACTTTACAGGTTGATCTTCCAGTaGAAATGTATAGGGGCCAGTGTATCTATTATTCAG +
Preference number: 6 (lower is better)
Translates to: PYGRQLYRLIFQ*KCIGASVSIIQ
Trigger: CTGAATAATAGATACACTGGCCCCTATACATTTGCACTGGAAGATCAACCTGTAAAGTTGCCTGCCGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CCA 72 bp ACCGTTAGTATAAGTGGTTTCTCTACATCTAGTCCTTaGGCATTTAGAGCCCGACATGTGATCAGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: TVSISGFSTSSP*AFRARHVIRKL
Trigger: AAGCTTCCTGATCACATGTCGGGCTCTAAATGCCCAAGGACTAGATGTAGAGAAACCACTTATACTAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp GCATCTTTTTCGAGGACAGCTGTTGGACAATTGTCATaGAAATCGGGTACTCTAACATATACCGTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: ASFSRTAVGQLS*KSGTLTYTVPV
Trigger: TACAGGCACGGTATATGTTAGAGTACCCGATTTCAATGACAATTGTCCAACAGCTGTCCTCGAAAAAGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp GAAGAACTGCAAACTGCATCTTTTTCGAGGACAGCTGTTGGACAATaGTCATTGAAATCGGGTACTCTAACATATACCGTGCCTGTAGAA +
Preference number: 6 (lower is better)
Translates to: EELQTASFSRTAVGQ*SLKSGTLTYTVPVE
Trigger: TTCTACAGGCACGGTATATGTTAGAGTACCCGATTTCAATGACAATTGTCCAACAGCTGTCCTCGAAAAAGATGCAGTTTGCAGTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp CTGCAGGGTTTGGCAAATTTCACCCATTCACGTTTTTaGCTTCTTTTAGCTTGTTGCATAGTCATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LQGLANFTHSRF*LLLACCIVISS
Trigger: AGAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAACCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp TCTGCAGGGTTTGGCAAATTTCACCCATTCACGTTTTaGCCTTCTTTTAGCTTGTTGCATAGTCATCTCTTC +
Preference number: 6 (lower is better)
Translates to: SAGFGKFHPFTF*PSFSLLHSHLF
Trigger: GAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAACCCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp CAAACTGCATCTTTTTCGAGGACAGCTGTTGGACAATaGTCATTGAAATCGGGTACTCTAACATATACCGTG +
Preference number: 6 (lower is better)
Translates to: QTASFSRTAVGQ*SLKSGTLTYTV
Trigger: CACGGTATATGTTAGAGTACCCGATTTCAATGACAATTGTCCAACAGCTGTCCTCGAAAAAGATGCAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp CTGCAAACTGCATCTTTTTCGAGGACAGCTGTTGGACAATTGTCATaGAAATCGGGTACTCTAACATATACCGTGCCTGTAGAAGTTTTA +
Preference number: 6 (lower is better)
Translates to: LQTASFSRTAVGQLS*KSGTLTYTVPVEVL
Trigger: TAAAACTTCTACAGGCACGGTATATGTTAGAGTACCCGATTTCAATGACAATTGTCCAACAGCTGTCCTCGAAAAAGATGCAGTTTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp TTCTCCTTCTCTGCAGGGTTTGGCAAATTTCACCCATTCACGTTTTaGCCTTCTTTTAGCTTGTTGCATAGTCATCTCTTCTTCATCATA +
Preference number: 6 (lower is better)
Translates to: FSFSAGFGKFHPFTF*PSFSLLHSHLFFII
Trigger: TATGATGAAGAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAACCCTGCAGAGAAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp GTACAAACTTCAGAACTTTCCATGAAATCGGCTCCATaGGCTGTTACAGGAGGCACACAAATATTTGTGATT +
Preference number: 6 (lower is better)
Translates to: VQTSELSMKSAP*AVTGGTQIFVI
Trigger: AATCACAAATATTTGTGTGCCTCCTGTAACAGCCAATGGAGCCGATTTCATGGAAAGTTCTGAAGTTTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp GGGTTTGGCAAATTTCACCCATTCACGTTTTTGCCTTCTTTTAGCTaGTTGCATAGTCATCTCTTCTTCATCATATTGACCTTTAGTCTC +
Preference number: 6 (lower is better)
Translates to: GFGKFHPFTFLPSFS*LHSHLFFIILTFSL
Trigger: GAGACTAAAGGTCAATATGATGAAGAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp TACGTATTTGTACAAACTTCAGAACTTTCCATGAAATCGGCTCCATaGGCTGTTACAGGAGGCACACAAATATTTGTGATTTCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: YVFVQTSELSMKSAP*AVTGGTQIFVISLS
Trigger: AGACAAGGAAATCACAAATATTTGTGTGCCTCCTGTAACAGCCAATGGAGCCGATTTCATGGAAAGTTCTGAAGTTTGTACAAATACGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp TTTTTGCTACTTATGCCTTTTTGCACAGTAAATGTCTaGGAAGCAGGACGGAATGCAATTCCTTCTCTTACA +
Preference number: 6 (lower is better)
Translates to: FLLLMPFCTVNV*EAGRNAIPSLT
Trigger: TGTAAGAGAAGGAATTGCATTCCGTCCTGCTTCCAAGACATTTACTGTGCAAAAAGGCATAAGTAGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 90 bp TTTGGCAAATTTCACCCATTCACGTTTTTGCCTTCTTTTAGCTTGTaGCATAGTCATCTCTTCTTCATCATATTGACCTTTAGTCTCTAT +
Preference number: 6 (lower is better)
Translates to: FGKFHPFTFLPSFSL*HSHLFFIILTFSLY
Trigger: ATAGAGACTAAAGGTCAATATGATGAAGAAGAGATGACTATGCAACAAGCTAAAAGAAGGCAAAAACGTGAATGGGTGAAATTTGCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS GCA 72 bp TTTTTGCACAGTAAATGTCTTGGAAGCAGGACGGAATaGAATTCCTTCTCTTACATTTATTACCTGAATTGT +
Preference number: 6 (lower is better)
Translates to: FLHSKCLGSRTE*NSFSYIYYLNC
Trigger: ACAATTCAGGTAATAAATGTAAGAGAAGGAATTGCATTCCGTCCTGCTTCCAAGACATTTACTGTGCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257189.5
CDS CAA 72 bp TTTAGCTTGTTGCATAGTCATCTCTTCTTCATCATATaGACCTTTAGTCTCTATTCGCAATTCTCCATGAAC +
Preference number: 6 (lower is better)
Translates to: FSLLHSHLFFII*TFSLYSQFSMN
Trigger: GTTCATGGAGAATTGCGAATAGAGACTAAAGGTCAATATGATGAAGAAGAGATGACTATGCAACAAGCTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257189.5