Pregenerated sensors for DPPA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000121570Ensembl transcript IDs: ENST00000335658.6, ENST00000475135.1, ENST00000477303.1, ENST00000478791.1, ENST00000489281.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGGAGAGAAGAACATCTTGCTTCTCAACAAACTTTCCTCCCTTaGTTTAACATTTTTGAGGATTCTTTCCCAAACCTATTACACCTG | + |
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Preference number: 1 (lower is better) Translates to: GRREEHLASQQTFLP*FNIFEDSFPNLLHL Trigger: CAGGTGTAATAGGTTTGGGAAAGAATCCTCAAAAATGTTAAAGCAAGGGAGGAAAGTTTGTTGAGAAGCAAGATGTTCTTCTCTCCTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| 3UTR-3UTR TCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAAGGCGGAGATTGCACTaGACTGAGATTGCACCACTG | + |
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Preference number: 2 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPRRRLH*TEIAPL Trigger: CAGTGGTGCAATCTCAGTTCAGTGCAATCTCCGCCT...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| 3UTR-3UTR TCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAAGGAGGGTGATCACTTaGGTCCAGGAGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPRRVIT*VQEFET Trigger: GGTCTCAAACTCCTGGACTCAAGTGATCACCCTCCT...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| 3UTR-3UTR TCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATTGAGTCCAGGAGTTTaGGACCAACCTGGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPLSPGV*DQPGQH Trigger: ATGTTGGCCAGGTTGGTCTCAAACTCCTGGACTCAA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| 3UTR-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACTTGAGTCCAGGAGTTaGAGACCAACCTGGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPLESRS*RPTWPT Trigger: TGTTGGCCAGGTTGGTCTCAAACTCCTGGACTCAAG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| 3UTR TCA 72 bp | CAAATTAATAGAAAGGAAGGAAACAGAACAGAAACTTaGCCCATCCAAATAAAGCAGGGGAGAAGTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: QINRKEGNRTET*PIQIKQGRSLK Trigger: TTTTAAACTTCTCCCCTGCTTTATTTGGATGGGTCAAGTTTCTGTTCTGTTTCCTTCCTTTCTATTAATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACGGAGCCTCGCAACATaGTTCCAAAATGGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPRSLAT*FQNGPC Trigger: GCAGGGGCCATTTTGGAAGCATGTTGCGAGGCTCCG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACTCAGCTTCAATTGTTaGCACCAGGCCCGCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPLSFNC*HQARRM Trigger: CATTCTGCGGGCCTGGTGCCAACAATTGAAGCTGAG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACCCCTGCCCCAAGATTaGTATTTGCAAAGTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPPLPQD*YLQSLL Trigger: GAGGAGACTTTGCAAATAGCAATCTTGGGGCAGGGG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATGGAGGTCCACTCCTTaGCTTTTGCCTTCTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPWRSTP*LLPSPY Trigger: GTATGGAGAAGGCAAAAGGCAAGGAGTGGACCTCCA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACTGGGGTTGTCAGTGTaGTCTGCCTTTTTCTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPLGLSV*SAFFLG Trigger: CCCTAAGAAAAAGGCAGAGCACACTGACAACCCCAG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAATAGTCCCAGCATTTTaGGAGGCTGAGGAGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPIVPAF*EAEEGD Trigger: ATCACCCTCCTCAGCCTCCCAAAATGCTGGGACTAT...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATTCCAAAATGGCCCCTaGCCCAAGATTGCTATTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPFQNGP*PKIAIC Trigger: GCAAATAGCAATCTTGGGGCAGGGGCCATTTTGGAA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATATGCATCCAATTTCTaGCCTTTGGAGCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPYASNF*PLELSF Trigger: GAAGCTGAGCTCCAAAGGCCAGAAATTGGATGCATA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATCAAGTCCATCACAATaGTTAGCTGAAGAACTCACT | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPSSPSQ*LAEELT Trigger: AGTGAGTTCTTCAGCTAAGCATTGTGATGGACTTGA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR TCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAATCACAATGCTTAGCTaGAGAACTCACTTAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPITMLS*RTHLKE Trigger: CTCTTTTAAGTGAGTTCTTCAGCTAAGCATTGTGAT...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAGAGAGAAGAACATCTTaGTTCTCAACAAACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPERRTS*FSTNFP Trigger: AGGAAAGTTTGTTGAGAAGCAAGATGTTCTTCTCTC...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR GCA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCATTCCACTCCTTCCAGTaGATTATTTTTAGTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPFHSFQ*IIFSIF Trigger: GAAGATACTAAAAATAATGCACTGGAAGGAGTGGAA...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAGACACCAGAGGCCTCTaGTGGAGATTCCACTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPDTRGL*WRFHCL Trigger: GAGGCAGTGGAATCTCCACAAGAGGCCTCTGGTGTC...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAGCTCAGCTTCAATTGTaGGCACCAGGCCCGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPAQLQL*APGPQN Trigger: ATTCTGCGGGCCTGGTGCCAACAATTGAAGCTGAGC...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACACTTAAAAGAGCTGTaGAAGGTCAGGCGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPHLKEL*KVRRRG Trigger: GCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAGCCCCTGCCCCAAGATaGCTATTTGCAAAGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPAPAPR*LFAKSP Trigger: AGGAGACTTTGCAAATAGCAATCTTGGGGCAGGGGC...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS CCA 90 bp | TGGTTCTCAAACTGTGGTCCCCAGACCAGCATCCTTAGTACTGCCTaGGAAACTGTTAGAGATGCAAACTCTTGCCAGGTACGGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: WFSNCGPQTSILSTA*ETVRDANSCQVRWL Trigger: GAGCCACCGTACCTGGCAAGAGTTTGCATCTCTAACAGTTTCCCAGGCAGTACTAAGGATGCTGGTCTGGGGACCACAGTTTGAGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475135.1 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACCCCAAGATTGCTATTaGCAAAGTCTCCTCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPPQDCY*QSLLPL Trigger: AAGTGGGAGGAGACTTTGCAAATAGCAATCTTGGGG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS TCA 90 bp | AAAACCGAGACAGTTAAAAATGACCCAGTTCAAGTCAAGAGGACCTaGGAGCGCTCGGATATGGCCGTTCAGTGCCTGTGCAACGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: KTETVKNDPVQVKRT*ERSDMAVQCLCNVL Trigger: TAAGACGTTGCACAGGCACTGAACGGCCATATCCGAGCGCTCTCAGGTCCTCTTGACTTGAACTGGGTCATTTTTAACTGTCTCGGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477303.1 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAGGAGAGAAGAACATCTaGCTTCTCAACAAACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPGEKNI*LLNKLS Trigger: GGAAAGTTTGTTGAGAAGCAAGATGTTCTTCTCTCC...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCACTTGCTTTAACATTTTaGAGGATTCTTTCCCAAACC | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPLALTF*RILSQT Trigger: GGTTTGGGAAAGAATCCTCAAAAATGTTAAAGCAAG...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS-3UTR CAA 90 bp | TCACTTAAAAGAGCTGTTGAAGGTCAGGCGCAGGGGCTCATGCCCATAGTCCCAAAACAGAACAGAAACTaGACCCATCCAAATAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLKRAVEGQAQGLMPIVPKQNRN*THPNKA Trigger: TGCTTTATTTGGATGGGTCAAGTTTCTGTTCTGTTT...TGGGACTATGGGCATGAGCCCCTGCGCCTGACCTTCAACAGCTCTTTTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS CCA 90 bp | GATGGAAATTTCTTCCCTGGTTTTTCTTCTTCAGAAAAATTCCTCTaGCTTCTAAGACCCGAGAAGGTGGGATTTGAGAATTTGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: DGNFFPGFSSSEKFL*LLRPEKVGFENLKT Trigger: GGTCTTCAAATTCTCAAATCCCACCTTCTCGGGTCTTAGAAGCCAGAGGAATTTTTCTGAAGAAGAAAAACCAGGGAAGAAATTTCCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489281.1 |
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| CDS GCA 90 bp | AAGATGCTTCAGGAAGGTAACAGTTTAAGCTTGGCTTCCATGAAGTaGAGGATTTGCACAATACATGATGGAAATTTCTTCCCTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: KMLQEGNSLSLASMK*RICTIHDGNFFPGF Trigger: AAAACCAGGGAAGAAATTTCCATCATGTATTGTGCAAATCCTGCACTTCATGGAAGCCAAGCTTAAACTGTTACCTTCCTGAAGCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489281.1 |
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| CDS CCA 72 bp | CTCAGGTCCTGCCCTAGACCTGCACCAGAAACTCTGTaGGCAGGGTCCAGGAATCACCGGCCCTCAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LRSCPRPAPETL*AGSRNHRPSKG Trigger: TCCCTTTGAGGGCCGGTGATTCCTGGACCCTGCCCACAGAGTTTCTGGTGCAGGTCTAGGGCAGGACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475135.1 ENST00000478791.1 |
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| CDS GCA 72 bp | AAGCGGAGCCTCGCAACATGCTTCCAAAATGGCCCCTaGCCCAAGATTGCTATTTGCAAAGTCTCCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: KRSLATCFQNGP*PKIAICKVSSH Trigger: GTGGGAGGAGACTTTGCAAATAGCAATCTTGGGGCAGGGGCCATTTTGGAAGCATGTTGCGAGGCTCCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335658.6 |
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| CDS TCA 72 bp | GAAAGAGACAGGTACCCGCACACCAGGATGACATACTaGTGTAAGACTGCATTATGGCCCATCACCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ERDRYPHTRMTY*CKTALWPITLD Trigger: ATCAAGGGTGATGGGCCATAATGCAGTCTTACATCAGTATGTCATCCTGGTGTGCGGGTACCTGTCTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475135.1 |
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| CDS CAA 72 bp | CTTATTTCCCCATTGGACCAGAATAAGCTCTTCATGTaGCGCTTACCAGAGGCCTCTTGTGGAGATTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LISPLDQNKLFM*RLPEASCGDST Trigger: AGTGGAATCTCCACAAGAGGCCTCTGGTAAGCGCAACATGAAGAGCTTATTCTGGTCCAATGGGGAAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475135.1 ENST00000478791.1 |
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| CDS CAA 72 bp | CATACTGATGTAAGACTGCATTATGGCCCATCACCCTaGATTGACCAGCTCCAAGATGTGAACCCTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: HTDVRLHYGPSP*IDQLQDVNPEI Trigger: GATTTCAGGGTTCACATCTTGGAGCTGGTCAATCAAGGGTGATGGGCCATAATGCAGTCTTACATCAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475135.1 |
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| CDS CAA 90 bp | AGCAGTGGTGACCAAAAGATGCTTCAGGAAGGTAACAGTTTAAGCTaGGCTTCCATGAAGTGCAGGATTTGCACAATACATGATGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSGDQKMLQEGNSLS*ASMKCRICTIHDGN Trigger: ATTTCCATCATGTATTGTGCAAATCCTGCACTTCATGGAAGCCAAGCTTAAACTGTTACCTTCCTGAAGCATCTTTTGGTCACCACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489281.1 |
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| CDS CCA 72 bp | TTCTTCCCTGGTTTTTCTTCTTCAGAAAAATTCCTCTaGCTTCTAAGACCCGAGAAGGTGGGATTTGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FFPGFSSSEKFL*LLRPEKVGFEN Trigger: ATTCTCAAATCCCACCTTCTCGGGTCTTAGAAGCCAGAGGAATTTTTCTGAAGAAGAAAAACCAGGGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489281.1 |
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| CDS CAA 72 bp | GACCAAAAGATGCTTCAGGAAGGTAACAGTTTAAGCTaGGCTTCCATGAAGTGCAGGATTTGCACAATACAT | + |
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Preference number: 6 (lower is better) Translates to: DQKMLQEGNSLS*ASMKCRICTIH Trigger: ATGTATTGTGCAAATCCTGCACTTCATGGAAGCCAAGCTTAAACTGTTACCTTCCTGAAGCATCTTTTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489281.1 |
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