Pregenerated sensors for DPM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000000419Ensembl transcript IDs: ENST00000371582.8, ENST00000371584.9, ENST00000371588.10, ENST00000413082.1, ENST00000466152.5, ENST00000494752.1, ENST00000681979.1, ENST00000682366.1, ENST00000682713.1, ENST00000682754.1, ENST00000683010.1, ENST00000683048.1, ENST00000683466.1, ENST00000684193.1, ENST00000684628.1, ENST00000684708.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTAGTTTATCCCAGTCGCTAGGAGACAGAAGACGGAAGCGGAAATaGCTTTCACGACAACTTCCGGAAGAGGTCGCCATGGCTTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: FSLSQSLGDRRRKRK*LSRQLPEEVAMASR Trigger: CCGGGAAGCCATGGCGACCTCTTCCGGAAGTTGTCGTGAAAGGCATTTCCGCTTCCGTCTTCTGTCTCCTAGCGACTGGGATAAACTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683466.1 |
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| CDS TCA 90 bp | CCTCTTTCTGTATTCCCATCCATTAGAAGGTTTTCAGAGAAGACTTaGGGTGTGACAGACCTGAGTTACTCATCTGTGAGACAGACTGAA | + |
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Preference number: 5 (lower is better) Translates to: PLSVFPSIRRFSEKT*GVTDLSYSSVRQTE Trigger: TTCAGTCTGTCTCACAGATGAGTAACTCAGGTCTGTCACACCTCAAGTCTTCTCTGAAAACCTTCTAATGGATGGGAATACAGAAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684628.1 |
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| CDS GCA 90 bp | TTAGCATCAGTTGCATACCTCGCCAATAGTATAATTCAACTGTCTTaGCCGAACAATCATCTCCATCTGGAAGACGTAGCCTTTAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LASVAYLANSIIQLS*PNNHLHLEDVAFRN Trigger: GTTTCTAAAGGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGAGGTATGCAACTGATGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000681979.1 ENST00000682366.1 ENST00000684708.1 |
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| CDS GCA 90 bp | AAGAGCTCACTAACGAGCCCTAAATATTACAGATCACCACCTCCTTaGTCTGTAATTCCTGGTCTTCTCTTACTAACAGGAAATGGACAT | + |
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Preference number: 5 (lower is better) Translates to: KSSLTSPKYYRSPPP*SVIPGLLLLTGNGH Trigger: ATGTCCATTTCCTGTTAGTAAGAGAAGACCAGGAATTACAGAGCAAGGAGGTGGTGATCTGTAATATTTAGGGCTCGTTAGTGAGCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000681979.1 ENST00000682366.1 ENST00000684708.1 |
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| CDS CCA 90 bp | CCCATAGATCTTCTCCAACTGTTCAGCAACATCCCTTGTTCCATCTaGGCTTCCATCATCTATGATTATAATTTCATAGTTGATTCCACT | + |
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Preference number: 5 (lower is better) Translates to: PIDLLQLFSNIPCSI*ASIIYDYNFIVDST Trigger: AGTGGAATCAACTATGAAATTATAATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAGATCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000371582.8 ENST00000371584.9 ENST00000371588.10 ENST00000413082.1 ENST00000466152.5 ENST00000681979.1 ENST00000682754.1 ENST00000683010.1 ENST00000683048.1 ENST00000683466.1 ENST00000684628.1 ENST00000684708.1 |
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| CDS TCA 90 bp | TTAGCCAAGAAGTTATATAAAAGTAGTGGAAATTTTCACTGTACCTaGAACTTCCTGTTAAATCAGATGCTCCTGGTCTCAGCAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LAKKLYKSSGNFHCT*NFLLNQMLLVSARS Trigger: AGATCTTGCTGAGACCAGGAGCATCTGATTTAACAGGAAGTTTCAGGTACAGTGAAAATTTCCACTACTTTTATATAACTTCTTGGCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000682754.1 ENST00000683010.1 |
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| CDS CCA 90 bp | TTGCACCTTCTTGGGAAATCTGATGTTTGTTCTCTCGATTCCCTTTaGGTTTTGAATACTAATATCACTCTTCCTCTATTAACTTATCTT | + |
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Preference number: 5 (lower is better) Translates to: LHLLGKSDVCSLDSL*VLNTNITLPLLTYL Trigger: AAGATAAGTTAATAGAGGAAGAGTGATATTAGTATTCAAAACCCAAAGGGAATCGAGAGAACAAACATCAGATTTCCCAAGAAGGTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000682713.1 |
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| CDS CCA 72 bp | AATTGGCCCCACGGCTGTAATCCCAGGAGGCCAAGATaGCTGGATCACTTGAGCCCAGGAGTGACCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NWPHGCNPRRPR*LDHLSPGVTSL Trigger: CAGGCTGGTCACTCCTGGGCTCAAGTGATCCAGCCATCTTGGCCTCCTGGGATTACAGCCGTGGGGCCAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371582.8 ENST00000413082.1 |
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| CDS GCA 72 bp | TCCCAGTCGCTAGGAGACAGAAGACGGAAGCGGAAATaGCTTTCACGACAACTTCCGGAAGAGGTCGCCATG | + |
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Preference number: 6 (lower is better) Translates to: SQSLGDRRRKRK*LSRQLPEEVAM Trigger: CATGGCGACCTCTTCCGGAAGTTGTCGTGAAAGGCATTTCCGCTTCCGTCTTCTGTCTCCTAGCGACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683466.1 |
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| CDS CAA 90 bp | AGCAAACCCCTGTGTTATCTATTCTCCAAGAGTAGAACAATGACTTaGGCTTCCCACTGTGCCTTAAATCTGGGCACTGGTGCCTTTACA | + |
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Preference number: 6 (lower is better) Translates to: SKPLCYLFSKSRTMT*ASHCALNLGTGAFT Trigger: TGTAAAGGCACCAGTGCCCAGATTTAAGGCACAGTGGGAAGCCAAAGTCATTGTTCTACTCTTGGAGAATAGATAACACAGGGGTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683010.1 |
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| CDS GCA 72 bp | GTTGCATACCTCGCCAATAGTATAATTCAACTGTCTTaGCCGAACAATCATCTCCATCTGGAAGACGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: VAYLANSIIQLS*PNNHLHLEDVA Trigger: GGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGAGGTATGCAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000681979.1 ENST00000682366.1 ENST00000684708.1 |
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| CDS GCA 72 bp | TATTGGAACCTCGCCAATAGTATAATTCAACTGTCTTaGCCGAACAATCATCTCCATCTGGAAGACGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: YWNLANSIIQLS*PNNHLHLEDVA Trigger: GGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTGAATTATACTATTGGCGAGGTTCCAATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000371582.8 ENST00000371584.9 ENST00000371588.10 ENST00000466152.5 ENST00000494752.1 ENST00000682713.1 ENST00000683048.1 ENST00000683466.1 ENST00000684193.1 |
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| CDS CAA 72 bp | CTGTGTTATCTATTCTCCAAGAGTAGAACAATGACTTaGGCTTCCCACTGTGCCTTAAATCTGGGCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LCYLFSKSRTMT*ASHCALNLGTG Trigger: ACCAGTGCCCAGATTTAAGGCACAGTGGGAAGCCAAAGTCATTGTTCTACTCTTGGAGAATAGATAACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683010.1 |
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| CDS TCA 72 bp | GTATTCCCATCCATTAGAAGGTTTTCAGAGAAGACTTaGGGTGTGACAGACCTGAGTTACTCATCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VFPSIRRFSEKT*GVTDLSYSSVR Trigger: TCTCACAGATGAGTAACTCAGGTCTGTCACACCTCAAGTCTTCTCTGAAAACCTTCTAATGGATGGGAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684628.1 |
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| CDS GCA 72 bp | CATTTACCATGTAGTAACACAGTTCCTTTAAACTCTTaGCACCAAGACCTCATACAACTGACACTCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: HLPCSNTVPLNS*HQDLIQLTLTS Trigger: AGAGGTGAGTGTCAGTTGTATGAGGTCTTGGTGGCAAGAGTTTAAAGGAACTGTGTTACTACATGGTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684628.1 |
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| CDS CCA 72 bp | CTTCTCCAACTGTTCAGCAACATCCCTTGTTCCATCTaGGCTTCCATCATCTATGATTATAATTTCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: LLQLFSNIPCSI*ASIIYDYNFIV Trigger: AACTATGAAATTATAATCATAGATGATGGAAGCCCAGATGGAACAAGGGATGTTGCTGAACAGTTGGAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000371582.8 ENST00000371584.9 ENST00000371588.10 ENST00000413082.1 ENST00000466152.5 ENST00000681979.1 ENST00000682754.1 ENST00000683010.1 ENST00000683048.1 ENST00000683466.1 ENST00000684628.1 ENST00000684708.1 |
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| CDS CCA 72 bp | AAAGGGACTTCTTTCTCTATACCAATGGTTCTCTACTaGAGGCAAAGGGTAATTTTTCCCCTAAGGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: KGTSFSIPMVLY*RQRVIFPLRKY Trigger: ATATTTCCTTAGGGGAAAAATTACCCTTTGCCTCCAGTAGAGAACCATTGGTATAGAGAAAGAAGTCCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000684628.1 |
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| CDS CAA 90 bp | CTTCTTGGGAAATCTGATGTTTGTTCTCTCGATTCCCTTTGGGTTTaGAATACTAATATCACTCTTCCTCTATTAACTTATCTTGACCTT | + |
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Preference number: 6 (lower is better) Translates to: LLGKSDVCSLDSLWV*NTNITLPLLTYLDL Trigger: AAGGTCAAGATAAGTTAATAGAGGAAGAGTGATATTAGTATTCAAAACCCAAAGGGAATCGAGAGAACAAACATCAGATTTCCCAAGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682713.1 |
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| CDS CAA 72 bp | TCCTTCCTAGAAAAATGTAGGACTTACTTCATTATTTaGCACCTTCTTGGGAAATCTGATGTTTGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFLEKCRTYFII*HLLGKSDVCSL Trigger: GAGAGAACAAACATCAGATTTCCCAAGAAGGTGCAAAATAATGAAGTAAGTCCTACATTTTTCTAGGAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000682713.1 |
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| CDS TCA 72 bp | AAGTTATATAAAAGTAGTGGAAATTTTCACTGTACCTaGAACTTCCTGTTAAATCAGATGCTCCTGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KLYKSSGNFHCT*NFLLNQMLLVS Trigger: TGAGACCAGGAGCATCTGATTTAACAGGAAGTTTCAGGTACAGTGAAAATTTCCACTACTTTTATATAACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000682754.1 ENST00000683010.1 |
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