RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOC2B (Homo sapiens)

Ensembl gene IDs: ENSG00000272636, ENSG00000272670

Ensembl transcript IDs: ENST00000343572.8, ENST00000496357.4, ENST00000609727.1, ENST00000613549.3, ENST00000633410.1, ENST00000633635.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCGGGAGGTTCACTCGGTTTGCGAAGGAACAACGGGCTCGGCATaGACGGCCCGGGCTCGGCGGGCGGACGGGCCGGGGCGCAGTTCC +
Preference number: 1 (lower is better)
Translates to: HREVHSVCEGTTGSA*TARARRADGPGRSS
Trigger: GGAACTGCGCCCCGGCCCGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTCCCGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 90 bp CGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGAAGGAGATaGGGGATGCAGTTAGGCTTTCTTGGGCTGGAGCAGCCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: RPAGPLLPSVQQRRR*GMQLGFLGLEQPVF
Trigger: GAAGACTGGCTGCTCCAGCCCAAGAAAGCCTAACTGCATCCCTCATCTCCTTCGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 90 bp GAAGCATGTGCCAATTTACCCATCATCAGGAGCCTCCGGGAACTCTaGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: EACANLPIIRSLREL*QTFGRQARFFHLSS
Trigger: GCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAATTGGCACATGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR GCA 90 bp CTACACCAGTTTCTCCATGGTGTTTCCATCACGTCCCCCACCTCCTaGCTCGAGCCTCACACCTTCCTAACAAACCCTCCCCTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LHQFLHGVSITSPTS*LEPHTFLTNPPLER
Trigger: CCTCTCCAGGGGAGGGTTTGTTAGGAAGGTGTGAGGCTCGAGGCAGGAGGTGGGGGACGTGATGGAAACACCATGGAGAAACTGGTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 90 bp GGGCAGGCCCTGTGTCTCATTCACCCCCAGGGCTTGTGGAATCATTaGGTGAAGCATGTGCCAATTTACCCATCATCAGGAGCCTCCGGG +
Preference number: 1 (lower is better)
Translates to: GQALCLIHPQGLWNH*VKHVPIYPSSGASG
Trigger: CCCGGAGGCTCCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGACACAGGGCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 90 bp ATCTGTCCAGCAGCGAAGGAGATGAGGGATGCAGTTAGGCTTTCTTaGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCT +
Preference number: 1 (lower is better)
Translates to: ICPAAKEMRDAVRLS*AGAASLQGPILHLS
Trigger: AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCTAACTGCATCCCTCATCTCCTTCGCTGCTGGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 90 bp AGGCCCTGTGTCTCATTCACCCCCAGGGCTTGTGGAATCATTGAGTaGAGCATGTGCCAATTTACCCATCATCAGGAGCCTCCGGGAACT +
Preference number: 1 (lower is better)
Translates to: RPCVSFTPRACGIIE*SMCQFTHHQEPPGT
Trigger: AGTTCCCGGAGGCTCCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGACACAGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 90 bp AGCCTCAGACGGGCTGGCGTTAGTCAATACTCCACGGCTGTTTGTTaGATGAGTGGACAACAGCATGGTCGACAGGTCCTGGTGCAAAAT +
Preference number: 1 (lower is better)
Translates to: SLRRAGVSQYSTAVC*MSGQQHGRQVLVQN
Trigger: ATTTTGCACCAGGACCTGTCGACCATGCTGTTGTCCACTCATCCAACAAACAGCCGTGGAGTATTGACTAACGCCAGCCCGTCTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 90 bp GGGCTGCCTCAGTTTGAATCCTGCTTCTGCCATCGACCAGCCGTGTaGTTCTGTAAAAGTATTTTAACCTCTCTGGGCCTTAGTTTCCCC +
Preference number: 1 (lower is better)
Translates to: GLPQFESCFCHRPAV*FCKSILTSLGLSFP
Trigger: GGGGAAACTAAGGCCCAGAGAGGTTAAAATACTTTTACAGAATCACACGGCTGGTCGATGGCAGAAGCAGGATTCAAACTGAGGCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 90 bp AACGCTTTAACAGAAAGACAATCTGCACGGGATCTAAAAGGGTGCTaGGATCCTAGGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: NALTERQSARDLKGC*DPREGRIQTSWGVP
Trigger: AGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCCTAGGATCTCAGCACCCTTTTAGATCCCGTGCAGATTGTCTTTCTGTTAAAGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCCCGAGTGCCTGTGCTaGCCCTGGGCTGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTPECLC*PWAGWP
Trigger: TGGCCAGCCAGCCCAGGGGCAGCACAGGCACTCGGG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGCGGGCTCCGTCCTTaGGGTCCCTCAGGAGTAGAA +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGGLRP*GPSGVE
Trigger: TTCTACTCCTGAGGGACCTCAAGGACGGAGCCCGCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTCCCTCTATCGGTGTTaGAGGGGTGGGCAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSLYRC*RGGQQA
Trigger: CGCCTGCTGCCCACCCCTTCAACACCGATAGAGGGA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCCACCGTCGTGCCTGTaGGTCCCTCTATCGGTGTTG +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTPPSCL*VPLSVL
Trigger: CAACACCGATAGAGGGACTCACAGGCACGACGGTGG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCAGAGGACCTGGGTTTaGGTCCTGGTTCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTQRTWV*VLVHPF
Trigger: GAAGGGGTGAACCAGGACTCAAACCCAGGTCCTCTG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGGGGGCCACAGGCCTTaGTGGCTGCTGGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: NSGRLSAGRPASSICPAAGGHRP*WLLGKP
Trigger: GGGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGCAGAGAAAGTTTGTaGGCTTCAGGCATGGGCCCC +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGRESL*ASGMGP
Trigger: GGGGCCCATGCCTGAAGCCCACAAACTTTCTCTGCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGCCCCTTTCACCCACTaGGCCTCACATTCCCCATGT +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTAPFTH*ASHSPC
Trigger: ACATGGGGAATGTGAGGCCCAGTGGGTGAAAGGGGC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCAGCAGCGAAGGAGATaGGGGATGCAGTTAGGCTTT +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTQQRRR*GMQLGF
Trigger: AAAGCCTAACTGCATCCCTCATCTCCTTCGCTGCTG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCTCCGAGCGGGGACTaGAGTGGCTCTGTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPPSGD*SGSVSK
Trigger: CTTGGACACAGAGCCACTGCAGTCCCCGCTCGGAGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGAGGCAGAGCCGCTTCTaGAGCTTCTCAAAGCGTTGT +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTRQSRF*SFSKRC
Trigger: ACAACGCTTTGAGAAGCTGCAGAAGCGGCTCTGCCT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGGATCTCCCCCAGTGTaGGGGCCACAGGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: NSGRLSAGRPASSICPAAGSPPV*GPQALV
Trigger: CACCAAGGCCTGTGGCCCCCACACTGGGGGAGATCC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGTGGGCTTCAGGCATaGGCCCCAAGATTCAGATAC +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTCGLQA*APRFRY
Trigger: GTATCTGAATCTTGGGGCCCATGCCTGAAGCCCACA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCGGGCGGGGCGGCGCTaGAGGCAGCGCCTGGTTACT +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRAGRR*RQRLVT
Trigger: AGTAACCAGGCGCTGCCTCCAGCGCCGCCCCGCCCG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCCCTGGGCAGGTGCTaGGGTCTCTTTCCACCACCG +
Preference number: 2 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGPLGRC*GLFPPP
Trigger: CGGTGGTGGAAAGAGACCTCAGCACCTGCCCAGGGG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGCCCGCCTCCCAGCCTaGCTGTCCCCATCTTTCGGT +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCARLPA*LSPSFG
Trigger: ACCGAAAGATGGGGACAGTCAGGCTGGGAGGCGGGC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTACAGGCCTTGGTGGCTaGTGGGGAAGCCCGGGGCCG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPTGLGG*WGSPGP
Trigger: CGGCCCCGGGCTTCCCCAGCAGCCACCAAGGCCTGT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGGGGGCCACAGGCCTTaGTGGCTGCTGGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RLSWAGAASLQGPILHLSGGHRP*WLLGKP
Trigger: GGGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGGATCTCCCCCAGTGTaGGGGCCACAGGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGGSPPV*GPQALV
Trigger: CACCAAGGCCTGTGGCCCCCACACTGGGGGAGATCC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGTCTTTGCTCCCAGATaGGCGTGTCCCCTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVVFAPR*ACPLPL
Trigger: CAGGGGAAGGGGACACGCCCATCTGGGAGCAAAGAC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGTGCTGCCCCTGGGCTaGCTGGCCAGTAAGCCCGCC +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPVLPLG*LASKPA
Trigger: GGCGGGCTTACTGGCCAGCCAGCCCAGGGGCAGCAC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTACAGGCCTTGGTGGCTaGTGGGGAAGCCCGGGGCCG +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVTGLGG*WGSPGP
Trigger: CGGCCCCGGGCTTCCCCAGCAGCCACCAAGGCCTGT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCTCCGAGCGGGGACTaGAGTGGCTCTGTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGPPSGD*SGSVSK
Trigger: CTTGGACACAGAGCCACTGCAGTCCCCGCTCGGAGG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCTGGAGAGGAGACCCTaGGTCCACAGCACCCCGGCC +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPLERRP*VHSTPA
Trigger: GGCCGGGGTGCTGTGGACCCAGGGTCTCCTCTCCAG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCAAGAGGGAAGGGACTaGGGGTACCGACCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCQEGRD*GYRPPE
Trigger: CTCTGGGGGTCGGTACCCCCAGTCCCTTCCCTCTTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCCCTGGGCAGGTGCTaGGGTCTCTTTCCACCACCG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPLGRC*GLFPPP
Trigger: CGGTGGTGGAAAGAGACCTCAGCACCTGCCCAGGGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGGGGGCTGTGGATCCTaGTTCCAGCTGTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPGGCGS*FQLCGA
Trigger: GGCCCCACACAGCTGGAACCAGGATCCACAGCCCCC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCTCCACCTGTCTGTCTaGTCACCACCTCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCLHLSV*SPPPSS
Trigger: AGAGGAGGGAGGTGGTGAGCAGACAGACAGGTGGAG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCAGCCTCCGGGAACTCTaGCAGACTTTCGGCCGGCAG +
Preference number: 2 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPSLREL*QTFGRQ
Trigger: CTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGCACCCCGGCCCCATTaGCTTTCTCTCTCCAGGCGT +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPAPRPH*LSLSRR
Trigger: ACGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTCAGCTCCTGGAGGGTaGAGCTGGCCCCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVSAPGG*SWPHRP
Trigger: AGGCCTGTGGGGCCAGCTCCACCCTCCAGGAGCTGA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCAGCTGTGTGGGGCCTaGAAGGCCCTGGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVQLCGA*KALGRS
Trigger: TGACCTGCCCAGGGCCTTCCAGGCCCCACACAGCTG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCTAGCAGGACCTCTCTaGTGTGAGCTCAGCACGCCA +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCLAGPL*CELSTP
Trigger: TGGCGTGCTGAGCTCACACCAGAGAGGTCCTGCTAG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGCCCACCAGCCAGGGTaGTTCTTGCTCAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVAHQPG*FLLSSW
Trigger: CCAGGAGCTGAGCAAGAATCACCCTGGCTGGTGGGC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTCCCTCTATCGGTGTTaGAGGGGTGGGCAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVSLYRC*RGGQQA
Trigger: CGCCTGCTGCCCACCCCTTCAACACCGATAGAGGGA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCACCTGGTGTCTCTGCTaGGTCTCCGACAGACCAAGA +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCTWCLC*VSDRPR
Trigger: TCTTGGTCTGTCGGAGACTCAGCAGAGACACCAGGT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGTTCAGACCAGTGCATaGAAAAACCTTCACACAAAA +
Preference number: 2 (lower is better)
Translates to: FAKEQRARHARPGLGGRTVQTSA*KNLHTK
Trigger: TTTTGTGTGAAGGTTTTTGCATGCACTGGTCTGAAC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGTCTTTGCTCCCAGATaGGCGTGTCCCCTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPVFAPR*ACPLPL
Trigger: CAGGGGAAGGGGACACGCCCATCTGGGAGCAAAGAC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCTCTCAGCCGGGGCTaGCCTCTAGAAGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPLSRG*PLEGSL
Trigger: CAAAGACCCTTCTAGAGGCCAGCCCCGGCTGAGAGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCCTCTCAGCCGGGGCTaGCCTCTAGAAGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: RLSWAGAASLQGPILHLSPLSRG*PLEGSL
Trigger: CAAAGACCCTTCTAGAGGCCAGCCCCGGCTGAGAGG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCCCTTCCTGGCTGTGTaGCCTTGGCAAACTACTCAG +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCPFLAV*PWQTTQ
Trigger: CTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACCAGGAAGCCGTCCCTaGCCTCCCGGCAGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVPGSRP*PPGRVS
Trigger: GCTGACTCTGCCGGGAGGTCAGGGACGGCTTCCTGG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACTGGAGAGGAGACCCTaGGTCCACAGCACCCCGGCC +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVLERRP*VHSTPA
Trigger: GGCCGGGGTGCTGTGGACCCAGGGTCTCCTCTCCAG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTTCTTGCTCAGCTCCTaGAGGGTGGAGCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVFLLSS*RVELAP
Trigger: TGGGGCCAGCTCCACCCTCCAGGAGCTGAGCAAGAA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGCCCTGGACGGCCACTaGTTACTCCCAAAAGGGACA +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVALDGH*LLPKGT
Trigger: TGTCCCTTTTGGGAGTAATCAGTGGCCGTCCAGGGC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGCAACTCCTTGGCTCTaGATTTGTTCACCCAGCGTT +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCATPWL*ICSPSV
Trigger: AACGCTGGGTGAACAAATGCAGAGCCAAGGAGTTGC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGAGGTTCACTCGGTTTaGGAAGGAACAACGGGCTCG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPEVHSV*EGTTGS
Trigger: CGAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGGGGCTACAGGTGTGTaGCACCACGCTAGGCTAATT +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPGATGV*HHARLI
Trigger: AATTAGCCTAGCGTGGTGGCACACACCTGTAGCCCC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCAGAGACAAGGCCCTaGACGGCCACTGATTACTCC +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPETRP*TATDYS
Trigger: GGAGTAATCAGTGGCCGTCCAGGGCCTTGTCTCTGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCTAGCAGGACCTCTCTaGTGTGAGCTCAGCACGCCA +
Preference number: 2 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVLAGPL*CELSTP
Trigger: TGGCGTGCTGAGCTCACACCAGAGAGGTCCTGCTAG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTAGCCTCCTGAAAAGCTaGGGCTACAGGTGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPSLLKS*GYRCVP
Trigger: TGGCACACACCTGTAGCCCCAGCTTTTCAGGAGGCT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CAA 90 bp AGGGCAGGCCCTGTGTCTCATTCACCCCCAGGGCTTGTGGAATCATaGAGTGAAGCATGTGCCAATTTACCCATCATCAGGAGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: RAGPVSHSPPGLVES*SEACANLPIIRSLR
Trigger: CCGGAGGCTCCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGACACAGGGCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATTCACCCAGCGTTCCTaGGGGGCCCTTGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVFTQRS*GALGRQ
Trigger: CTGCCTACCAAGGGCCCCTCAGGAACGCTGGGTGAA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGATCTAAAAGGGTGCTaGGATCCTAGGGAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPDLKGC*DPREGR
Trigger: CCTTCCTTCCCTAGGATCTCAGCACCCTTTTAGATC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCAGCCTCTTCTCGCTTTaGCATTCACTTCTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCSLFSL*HSLLCL
Trigger: AAGACACAGAAGTGAATGGCAAAGCGAGAAGAGGCT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATCCAAGCAGGGGTTCTaGATCTCCCCCAGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVSKQGF*ISPSVG
Trigger: CCCCACACTGGGGGAGATCCAGAACCCCTGCTTGGA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGTAGTGGGACCAAGATaGCACGAGCAAGCACCCGGA +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVVVGPR*HEQAPG
Trigger: TCCGGGTGCTTGCTCGTGGCATCTTGGTCCCACTAC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGGCTTGTGGAATCATTaGGTGAAGCATGTGCCAATT +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPGLWNH*VKHVPI
Trigger: AATTGGCACATGCTTCACTCAATGATTCCACAAGCC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGTTCAGACCAGTGCATaGAAAAACCTTCACACAAAA +
Preference number: 2 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCVQTSA*KNLHTK
Trigger: TTTTGTGTGAAGGTTTTTGCATGCACTGGTCTGAAC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTATGCGTTCAGACCAGTaGATGCAAAAACCTTCACAC +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPMRSDQ*MQKPSH
Trigger: GTGTGAAGGTTTTTGCATGCACTGGTCTGAACGCAT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCTCACATTCCCCATGTaGCTAATAAGGAAGTCATGG +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPLTFPM*LIRKSW
Trigger: CCATGACTTCCTTATTAGGCACATGGGGAATGTGAG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATTGTTCCCAGCTTCCTaGCTAGATGGGAACTCCCTG +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVLFPAS*LDGNSL
Trigger: CAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTAAATCTATTAAAAGGTaGGAGTCTCGCCAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPKSIKR*ESRQGN
Trigger: ATTGCCTTGGCGAGACTCTCACCTTTTAATAGATTT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGCAACTCCTTGGCTCTaGATTTGTTCACCCAGCGTT +
Preference number: 2 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVATPWL*ICSPSV
Trigger: AACGCTGGGTGAACAAATGCAGAGCCAAGGAGTTGC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTCCACCACCGGCCTCTaGGGCCCCAGAGAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSTTGL*GPRELR
Trigger: TCTCAGCTCTCTGGGGCCCAAGAGGCCGGTGGTGGA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGGGGTTTCGCCCTGTaGGCCAGGCGGGTTTCGAAC +
Preference number: 3 (lower is better)
Translates to: FAKEQRARHARPGLGGRTWGFAL*ARRVSN
Trigger: GTTCGAAACCCGCCTGGCCAACAGGGCGAAACCCCA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCAGAGCCCACGGTACTaGCAGACTGGCCAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: FAKEQRARHARPGLGGRTQSPRY*QTGQAG
Trigger: ACCAGCTTGGCCAGTCTGCAAGTACCGTGGGCTCTG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp GCTGAGCCCTCCACATCCTCCGAGCGGGGACTGCAGTaGCTCTGTGTCCAAGCAGGGGTTCTGGATCTCCCC +
Preference number: 3 (lower is better)
Translates to: AEPSTSSERGLQ*LCVQAGVLDLP
Trigger: GGGGAGATCCAGAACCCCTGCTTGGACACAGAGCCACTGCAGTCCCCGCTCGGAGGATGTGGAGGGCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTGGGGGCCACAGGCCTaGGTGGCTGCTGGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPWGPQA*VAAGEA
Trigger: GGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCCA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCTGGGGGCCACAGGCCTaGGTGGCTGCTGGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPWGPQA*VAAGEA
Trigger: GGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCCA...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGGCTTGTGGAATCATaGAGTGAAGCATGTGCCAAT +
Preference number: 3 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGLVES*SEACAN
Trigger: ATTGGCACATGCTTCACTCAATGATTCCACAAGCCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGTCCCTCTATCGGTGTaGAAGGGGTGGGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCVPLSV*KGWAAG
Trigger: GCCTGCTGCCCACCCCTTCAACACCGATAGAGGGAC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp CACGCCAATTCCCCTGAAGCGTGGTGTCCAGCACTCTaGGCTGGGGGCTGTGGATCCTGGTTCCAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: HANSPEAWCPAL*AGGCGSWFQLC
Trigger: ACACAGCTGGAACCAGGATCCACAGCCCCCAGCCCAGAGTGCTGGACACCACGCTTCAGGGGAATTGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTAGCACCCCGGCCCCATaGGCTTTCTCTCTCCAGGCG +
Preference number: 3 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPSTPAP*AFSLQA
Trigger: CGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGCT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp GCCAATTTACCCATCATCAGGAGCCTCCGGGAACTCTaGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: ANLPIIRSLREL*QTFGRQARFFH
Trigger: ATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCTGGCCAAGCTGGTCTaGGTATTTCTCACCCCAGTT +
Preference number: 3 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCLAKLV*VFLTPV
Trigger: AACTGGGGTGAGAAATACCAAGACCAGCTTGGCCAG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp GGCCCGCTTCTTCCATCTGTCCAGCAGCGAAGGAGATaGGGGATGCAGTTAGGCTTTCTTGGGCTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: GPLLPSVQQRRR*GMQLGFLGLEQ
Trigger: CTGCTCCAGCCCAAGAAAGCCTAACTGCATCCCTCATCTCCTTCGCTGCTGGACAGATGGAAGAAGCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATCCACCACCGGCCTCTaGGGCCCCAGAGAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVSTTGL*GPRELR
Trigger: TCTCAGCTCTCTGGGGCCCAAGAGGCCGGTGGTGGA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCTCTAGAAGGGTCTTaGCTCCCAGATGGGCGTGTC +
Preference number: 3 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPLEGS*LPDGRV
Trigger: GACACGCCCATCTGGGAGCAAAGACCCTTCTAGAGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp GCAGCGAAGGAGATGAGGGATGCAGTTAGGCTTTCTTaGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTC +
Preference number: 3 (lower is better)
Translates to: AAKEMRDAVRLS*AGAASLQGPIL
Trigger: GAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCTAACTGCATCCCTCATCTCCTTCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp CTGAGGTCTGAACTTGAGCCTACACCAGTTTCTCCATaGTGTTTCCATCACGTCCCCCACCTCCTGCCTCGA +
Preference number: 3 (lower is better)
Translates to: LRSELEPTPVSP*CFHHVPHLLPR
Trigger: TCGAGGCAGGAGGTGGGGGACGTGATGGAAACACCATGGAGAAACTGGTGTAGGCTCAAGTTCAGACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp CGGGCTGGCGTTAGTCAATACTCCACGGCTGTTTGTTaGATGAGTGGACAACAGCATGGTCGACAGGTCCTG +
Preference number: 3 (lower is better)
Translates to: RAGVSQYSTAVC*MSGQQHGRQVL
Trigger: CAGGACCTGTCGACCATGCTGTTGTCCACTCATCCAACAAACAGCCGTGGAGTATTGACTAACGCCAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp CTGGCGTTAGTCAATACTCCACGGCTGTTTGTTGGATaGGTGGACAACAGCATGGTCGACAGGTCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: LALVNTPRLFVG*VDNSMVDRSWC
Trigger: GCACCAGGACCTGTCGACCATGCTGTTGTCCACTCATCCAACAAACAGCCGTGGAGTATTGACTAACGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR GCA 72 bp CATGGTCGACAGGTCCTGGTGCAAAATGTCTTGGGCTaGCTCAGTTTGAATCCTGCTTCTGCCATCGACCAG +
Preference number: 3 (lower is better)
Translates to: HGRQVLVQNVLG*LSLNPASAIDQ
Trigger: CTGGTCGATGGCAGAAGCAGGATTCAAACTGAGGCAGCCCAAGACATTTTGCACCAGGACCTGTCGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CCA 72 bp GAGCCCACGGTACTTGCAGACTGGCCAAGCTGGTCTTaGTATTTCTCACCCCAGTTGGAATGGTTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: EPTVLADWPSWS*YFSPQLEWFVP
Trigger: GGGAACAAACCATTCCAACTGGGGTGAGAAATACCAAGACCAGCTTGGCCAGTCTGCAAGTACCGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp AGGTCCTGGTGCAAAATGTCTTGGGCTGCCTCAGTTTaGATCCTGCTTCTGCCATCGACCAGCCGTGTGATT +
Preference number: 3 (lower is better)
Translates to: RSWCKMSWAASV*ILLLPSTSRVI
Trigger: AATCACACGGCTGGTCGATGGCAGAAGCAGGATTCAAACTGAGGCAGCCCAAGACATTTTGCACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGTAGGCAGAGAAAGTTaGTGGGCTTCAGGCATGGGC +
Preference number: 3 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVVGRES*WASGMG
Trigger: GCCCATGCCTGAAGCCCACAAACTTTCTCTGCCTAC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTACCAAAATACAAAACTaGTCTGTGGGACTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPTKIQN*SVGLQF
Trigger: AAACTGCAGTCCCACAGACAAGTTTTGTATTTTGGT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp GTCTCATTCACCCCCAGGGCTTGTGGAATCATTGAGTaGAGCATGTGCCAATTTACCCATCATCAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: VSFTPRACGIIE*SMCQFTHHQEP
Trigger: AGGCTCCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR GCA 72 bp TGGCAAACTACTCAGACTCTGGGAACCTGTTTCACCTaGAAGATGGGGATGAGAATCAAACCCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: WQTTQTLGTCFT*KMGMRIKPTLQ
Trigger: CTGCAAGGTGGGTTTGATTCTCATCCCCATCTTGCAGGTGAAACAGGTTCCCAGAGTCTGAGTAGTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGGGCTTGTGGAATCATaGAGTGAAGCATGTGCCAAT +
Preference number: 3 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVGLVES*SEACAN
Trigger: ATTGGCACATGCTTCACTCAATGATTCCACAAGCCC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp CTGTGTCTCATTCACCCCCAGGGCTTGTGGAATCATTaGGTGAAGCATGTGCCAATTTACCCATCATCAGGA +
Preference number: 3 (lower is better)
Translates to: LCLIHPQGLWNH*VKHVPIYPSSG
Trigger: TCCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR TCA 72 bp CAGTTTGAATCCTGCTTCTGCCATCGACCAGCCGTGTaGTTCTGTAAAAGTATTTTAACCTCTCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: QFESCFCHRPAV*FCKSILTSLGL
Trigger: AAGGCCCAGAGAGGTTAAAATACTTTTACAGAATCACACGGCTGGTCGATGGCAGAAGCAGGATTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGGGGCCACAGGCCTTaGTGGCTGCTGGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGGHRP*WLLGKP
Trigger: GGGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTCCATGGCGGCCAGGTaGGCGCACCGCACGATGCCT +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSMAAR*AHRTMP
Trigger: AGGCATCGTGCGGTGCGCCCACCTGGCCGCCATGGA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCACAACGGGCTCGGCATaGACGGCCCGGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVTTGSA*TARARR
Trigger: CCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGT...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTCAGGCGCTCCCCCTTaGCGTGGATGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSGAPP*RGCPEP
Trigger: TGGTTCTGGGCATCCACGCCAAGGGGGAGCGCCTGA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTTCTTGCTCAGCTCCTaGAGGGTGGAGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTFLLSS*RVELAP
Trigger: TGGGGCCAGCTCCACCCTCCAGGAGCTGAGCAAGAA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGGGTTTCGCCCTGTTaGCCAGGCGGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGVSPC*PGGFRT
Trigger: AGTTCGAAACCCGCCTGGCCAACAGGGCGAAACCCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCAGGAAGCCGTCCCTaGCCTCCCGGCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPGSRP*PPGRVS
Trigger: GCTGACTCTGCCGGGAGGTCAGGGACGGCTTCCTGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGGCTGGGGCCCGGGCTaGAGCCGTAGGCTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAGWGPG*SRRLRR
Trigger: TCTTCGGAGCCTACGGCTCCAGCCCGGGCCCCAGCC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCGGGCGGGGCGGCGCTaGAGGCAGCGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCRAGRR*RQRLVT
Trigger: AGTAACCAGGCGCTGCCTCCAGCGCCGCCCCGCCCG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCCCGCCTCCCAGCCTaGCTGTCCCCATCTTTCGGT +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVARLPA*LSPSFG
Trigger: ACCGAAAGATGGGGACAGTCAGGCTGGGAGGCGGGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCACAGGCCTTGGTGGCTaGTGGGGAAGCCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCTGLGG*WGSPGP
Trigger: CGGCCCCGGGCTTCCCCAGCAGCCACCAAGGCCTGT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCCCGAGTGCCTGTGCTaGCCCTGGGCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCPECLC*PWAGWP
Trigger: TGGCCAGCCAGCCCAGGGGCAGCACAGGCACTCGGG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCTCGGCCTCCCAAAGTaGTGCAATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTLGLPK*CNYRRE
Trigger: CTCACGCCTGTAATTGCAGCACTTTGGGAGGCCGAG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGGGGGCTACAGGTGTGTaGCACCACGCTAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTGATGV*HHARLI
Trigger: AATTAGCCTAGCGTGGTGGCACACACCTGTAGCCCC...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACGGACGGCCCTGACTTaGCCGCTGCCCGCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPRTALT*PLPAPL
Trigger: CAGCGGAGCGGGCAGCGGCCAAGTCAGGGCCGTCCG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGGCTGGGGCCCGGGCTaGAGCCGTAGGCTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCGWGPG*SRRLRR
Trigger: TCTTCGGAGCCTACGGCTCCAGCCCGGGCCCCAGCC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGAGCTTCCTGACTAGATaGGAACTCCCTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSFLTR*ELPEGR
Trigger: CCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCTCAGCTCCTGGAGGGTaGAGCTGGCCCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVSAPGG*SWPHRP
Trigger: AGGCCTGTGGGGCCAGCTCCACCCTCCAGGAGCTGA...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGGGCCTGGAAGGCCCTaGGCAGGTCACCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVGPGRP*AGHLTS
Trigger: AGAGGTCAGGTGACCTGCCCAGGGCCTTCCAGGCCC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGGGGGCTGTGGATCCTaGTTCCAGCTGTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVGGCGS*FQLCGA
Trigger: GGCCCCACACAGCTGGAACCAGGATCCACAGCCCCC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGAATTCCCCTGAAGCGTaGTGTCCAGCACTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTNSPEA*CPALWA
Trigger: AGCCCAGAGTGCTGGACACCACGCTTCAGGGGAATT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGTGCTGCCCCTGGGCTaGCTGGCCAGTAAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCVLPLG*LASKPA
Trigger: GGCGGGCTTACTGGCCAGCCAGCCCAGGGGCAGCAC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGTGGGCGTCAGTCGCTaGGCACAGCCCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCVGVSR*AQPLGA
Trigger: AGCTCCCAGGGGCTGTGCTCAGCGACTGACGCCCAC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGGCGGGCTCCGTCCTTaGGGTCCCTCAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVGGLRP*GPSGVE
Trigger: TTCTACTCCTGAGGGACCTCAAGGACGGAGCCCGCC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGTGCCAGCGCTCGATaGGCTTGTCCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTCASAR*ACPCSS
Trigger: TGAAGAACAAGGACAAGCGCATCGAGCGCTGGCACA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCTTCCTGGGGAGTTCCTaGCCGAGTGCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVFLGSS*PSACAA
Trigger: GGCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAA...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTCCATGGCGGCCAGGTaGGCGCACCGCACGATGCCT +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGSMAAR*AHRTMP
Trigger: AGGCATCGTGCGGTGCGCCCACCTGGCCGCCATGGA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCGGACGGCCCTGACTTaGCCGCTGCCCGCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRTALT*PLPAPL
Trigger: CAGCGGAGCGGGCAGCGGCCAAGTCAGGGCCGTCCG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGGGGCCACAGGCCTTaGTGGCTGCTGGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGGHRP*WLLGKP
Trigger: GGGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCTGGAGAGGAGACCCTaGGTCCACAGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGLERRP*VHSTPA
Trigger: GGCCGGGGTGCTGTGGACCCAGGGTCTCCTCTCCAG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTCAGCTCCTGGAGGGTaGAGCTGGCCCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAASAPGG*SWPHRP
Trigger: AGGCCTGTGGGGCCAGCTCCACCCTCCAGGAGCTGA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCCTCCCTGAGTAGCTaGGACTACAGGCGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVASLSS*DYRRAP
Trigger: TGGCGCACGCCTGTAGTCCCAGCTACTCAGGGAGGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGCCCACCAGCCAGGGTaGTTCTTGCTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAAHQPG*FLLSSW
Trigger: CCAGGAGCTGAGCAAGAATCACCCTGGCTGGTGGGC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTTCACCCAGCGTTCCTaGGGGGCCCTTGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAFTQRS*GALGRQ
Trigger: CTGCCTACCAAGGGCCCCTCAGGAACGCTGGGTGAA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGTGCCTCAGCCTCCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAVPQPP*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGGAGGCTGAGGCAC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCTGCCCGAGTGCCTGTaGTGCCCCTGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPLPECL*CPWAGW
Trigger: CCAGCCAGCCCAGGGGCAGCACAGGCACTCGGGCAG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTACAACGGGCTCGGCATaGACGGCCCGGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVTTGSA*TARARR
Trigger: CCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGGTAGCAGTGGCGGGTaGGCGTCAGTCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGGSSGG*ASVAEH
Trigger: GTGCTCAGCGACTGACGCCCACCCGCCACTGCTACC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCTCCAAGCAGGGGTTCTaGATCTCCCCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVSKQGF*ISPSVG
Trigger: CCCCACACTGGGGGAGATCCAGAACCCCTGCTTGGA...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTCACCCCAGTTGGAATaGTTTGTTCCCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSPQLE*FVPSFL
Trigger: CAGGAAGCTGGGAACAAACCATTCCAACTGGGGTGA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGGGCCTGGAAGGCCCTaGGCAGGTCACCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCGPGRP*AGHLTS
Trigger: AGAGGTCAGGTGACCTGCCCAGGGCCTTCCAGGCCC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCAGCTGTGTGGGGCCTaGAAGGCCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCQLCGA*KALGRS
Trigger: TGACCTGCCCAGGGCCTTCCAGGCCCCACACAGCTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCCATTTGCACAGCCTaGGCAGTAGAGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPICTA*AVEGPG
Trigger: TCCAGGGCCCTCTACTGCCCAGGCTGTGCAAATGGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGTGGGCGTCAGTCGCTaGGCACAGCCCCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPVGVSR*AQPLGA
Trigger: AGCTCCCAGGGGCTGTGCTCAGCGACTGACGCCCAC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCCCTGGACGGCCACTaGTTACTCCCAAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVALDGH*LLPKGT
Trigger: TGTCCCTTTTGGGAGTAATCAGTGGCCGTCCAGGGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCTAGAGGTCAGGAGGTaGCCGCTTCGGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGLEVRR*PLRGWK
Trigger: CTTCCAGCCCCGAAGCGGTCACCTCCTGACCTCTAG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGTTCTGAGCTTATTTaGCTTACTGGCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTCSELI*LTGSWQ
Trigger: CTGCCAGGAGCCAGTAAGGCAAATAAGCTCAGAACA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCCGAGTGCCTGTGCTaGCCCTGGGCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPECLC*PWAGWP
Trigger: TGGCCAGCCAGCCCAGGGGCAGCACAGGCACTCGGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTTCCTGGGGAGTTCCTaGCCGAGTGCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGFLGSS*PSACAA
Trigger: GGCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTTGCCCAGGCTGGAGTaGGGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGLPRLE*GGVISA
Trigger: AGCCGAGATCACGCCACCGCACTCCAGCCTGGGCAA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTTGCCCAGGCTGGAGTaGGGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCLPRLE*GGVISA
Trigger: AGCCGAGATCACGCCACCGCACTCCAGCCTGGGCAA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTCAGGCGCTCCCCCTTaGCGTGGATGCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCSGAPP*RGCPEP
Trigger: TGGTTCTGGGCATCCACGCCAAGGGGGAGCGCCTGA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGTCTTTGCTCCCAGATaGGCGTGTCCCCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAVFAPR*ACPLPL
Trigger: CAGGGGAAGGGGACACGCCCATCTGGGAGCAAAGAC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCAGCCTCCGGGAACTCTaGCAGACTTTCGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCSLREL*QTFGRQ
Trigger: CTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCTGGAGAGGAGACCCTaGGTCCACAGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPLERRP*VHSTPA
Trigger: GGCCGGGGTGCTGTGGACCCAGGGTCTCCTCTCCAG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCAGAGACAAGGCCCTaGACGGCCACTGATTACTCC +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPETRP*TATDYS
Trigger: GGAGTAATCAGTGGCCGTCCAGGGCCTTGTCTCTGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTTCTTGCTCAGCTCCTaGAGGGTGGAGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAFLLSS*RVELAP
Trigger: TGGGGCCAGCTCCACCCTCCAGGAGCTGAGCAAGAA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGGGGCTGTGGATCCTaGTTCCAGCTGTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGGCGS*FQLCGA
Trigger: GGCCCCACACAGCTGGAACCAGGATCCACAGCCCCC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCTAGCAGGACCTCTCTaGTGTGAGCTCAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVLAGPL*CELSTP
Trigger: TGGCGTGCTGAGCTCACACCAGAGAGGTCCTGCTAG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCCCCTTTCACCCACTaGGCCTCACATTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVAPFTH*ASHSPC
Trigger: ACATGGGGAATGTGAGGCCCAGTGGGTGAAAGGGGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCCCATTTGCACAGCCTaGGCAGTAGAGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAPICTA*AVEGPG
Trigger: TCCAGGGCCCTCTACTGCCCAGGCTGTGCAAATGGG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGGGGTTTCGCCCTGTTaGCCAGGCGGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAGVSPC*PGGFRT
Trigger: AGTTCGAAACCCGCCTGGCCAACAGGGCGAAACCCC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCTCTGTCGCCCAGGCTaGAGTGCAGTGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCLCRPG*SAVPRS
Trigger: AGATCGCGGCACTGCACTCCAGCCTGGGCGACAGAG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCTGGAGGCAGCGCCTaGTTACTGACACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVAGGSA*LLTPGM
Trigger: CATTCCAGGTGTCAGTAACCAGGCGCTGCCTCCAGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCTCTCCAGGCAGATGCTaGAGGTCTTGGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVSPGRC*RSWCGW
Trigger: CCAACCACACCAAGACCTTCAGCATCTGCCTGGAGA...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCCCCTGGGCAGGTGCTaGGGTCTCTTTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPPLGRC*GLFPPP
Trigger: CGGTGGTGGAAAGAGACCTCAGCACCTGCCCAGGGG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCACCTGGTGTCTCTGCTaGGTCTCCGACAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVTWCLC*VSDRPR
Trigger: TCTTGGTCTGTCGGAGACTCAGCAGAGACACCAGGT...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGCCCGCCTCCCAGCCTaGCTGTCCCCATCTTTCGGT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPARLPA*LSPSFG
Trigger: ACCGAAAGATGGGGACAGTCAGGCTGGGAGGCGGGC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGTGCCTCAGCCTCCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPVPQPP*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGGAGGCTGAGGCAC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACTAGAGGTCAGGAGGTaGCCGCTTCGGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPLEVRR*PLRGWK
Trigger: CTTCCAGCCCCGAAGCGGTCACCTCCTGACCTCTAG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGGGCGCACCGCACGATaGCTACCAGCAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSGRTAR*LPAGLA
Trigger: AGCAAGGCCTGCTGGTAGGCATCGTGCGGTGCGCCC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCATCGCTGGTGAGCGTGTaGCAGCGCTCGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPSLVSV*QRSMRL
Trigger: CAAGCGCATCGAGCGCTGGCACACGCTCACCAGCGA...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGATGCGTTCAGACCAGTaGATGCAAAAACCTTCACAC +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTMRSDQ*MQKPSH
Trigger: GTGTGAAGGTTTTTGCATGCACTGGTCTGAACGCAT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGAGCCTCTTCTCGCTTTaGCATTCACTTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTSLFSL*HSLLCL
Trigger: AAGACACAGAAGTGAATGGCAAAGCGAGAAGAGGCT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGAGTTCCTGCCCGAGTaGCTGTGCTGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSEFLPE*LCCPWA
Trigger: AGCCCAGGGGCAGCACAGGCACTCGGGCAGGAACTC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGTGATCTCGGCTCACTaGAATCCCCACTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVVISAH*NPHFPG
Trigger: GCCTGGAAAGTGGGGATTGCAGTGAGCCGAGATCAC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGCTGAGCACAGCCCCTaGGAGCTCGCTGGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSAEHSP*ELAGER
Trigger: ACGCTCACCAGCGAGCTCCCAGGGGCTGTGCTCAGC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGCTGAGCACAGCCCCTaGGAGCTCGCTGGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPAEHSP*ELAGER
Trigger: ACGCTCACCAGCGAGCTCCCAGGGGCTGTGCTCAGC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGGTAGCAGTGGCGGGTaGGCGTCAGTCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPGSSGG*ASVAEH
Trigger: GTGCTCAGCGACTGACGCCCACCCGCCACTGCTACC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCCTCTCAGCCGGGGCTaGCCTCTAGAAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCPLSRG*PLEGSL
Trigger: CAAAGACCCTTCTAGAGGCCAGCCCCGGCTGAGAGG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCAGCTTCCTGACTAGATaGGAACTCCCTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVSFLTR*ELPEGR
Trigger: CCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCT...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCAGCTGTGTGGGGCCTaGAAGGCCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPQLCGA*KALGRS
Trigger: TGACCTGCCCAGGGCCTTCCAGGCCCCACACAGCTG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCTAGCAGGACCTCTCTaGTGTGAGCTCAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAALAGPL*CELSTP
Trigger: TGGCGTGCTGAGCTCACACCAGAGAGGTCCTGCTAG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCCTTCCTGGCTGTGTaGCCTTGGCAAACTACTCAG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPFLAV*PWQTTQ
Trigger: CTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGTTTGTTGGATGAGTaGACAACAGCATGGTCGACA +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTCLLDE*TTAWST
Trigger: TGTCGACCATGCTGTTGTCCACTCATCCAACAAACA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGCCCTTGGCCTTGGTaGTGGTGCAGTGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGPWPW*WCSGGR
Trigger: ACGCCCTCCACTGCACCATCACCAAGGCCAAGGGCC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCGTAATCCCAAACGGTaGCCTCCAGGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAARNPKR*PPGTSW
Trigger: CCAAGAAGTCCCTGGAGGTCACCGTTTGGGATTACG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCCCTGGGCAGGTGCTaGGGTCTCTTTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPLGRC*GLFPPP
Trigger: CGGTGGTGGAAAGAGACCTCAGCACCTGCCCAGGGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGAAGGAGATaGGGGATGCAGTTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVQQRRR*GMQLGF
Trigger: AAAGCCTAACTGCATCCCTCATCTCCTTCGCTGCTG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGGCGGGCTCCGTCCTTaGGGTCCCTCAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSGGLRP*GPSGVE
Trigger: TTCTACTCCTGAGGGACCTCAAGGACGGAGCCCGCC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCAGGACCTCTCTGGTGTaGGCTCAGCACGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCRTSLV*AQHANS
Trigger: GGAATTGGCGTGCTGAGCTCACACCAGAGAGGTCCT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTCCCTCTATCGGTGTTaGAGGGGTGGGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSSLYRC*RGGQQA
Trigger: CGCCTGCTGCCCACCCCTTCAACACCGATAGAGGGA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTCCCTCTATCGGTGTTaGAGGGGTGGGCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPSLYRC*RGGQQA
Trigger: CGCCTGCTGCCCACCCCTTCAACACCGATAGAGGGA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCAGAGGACCTGGGTTTaGGTCCTGGTTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCQRTWV*VLVHPF
Trigger: GAAGGGGTGAACCAGGACTCAAACCCAGGTCCTCTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTGGGCTGCCTCAGTTTaGATCCTGCTTCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAWAASV*ILLLPS
Trigger: CGATGGCAGAAGCAGGATTCAAACTGAGGCAGCCCA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCTACCAGCAGGCCTTaGTTCTGTGAGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPTSRP*FCELYL
Trigger: CAAGTACAGCTCACAGAAGCAAGGCCTGCTGGTAGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGGCGCACCGCACGATaGCTACCAGCAGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGRTAR*LPAGLA
Trigger: AGCAAGGCCTGCTGGTAGGCATCGTGCGGTGCGCCC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCAGGCAGTCAAACCAGTaGTTCAGGCGCTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGRQSNQ*FRRSPL
Trigger: CAAGGGGGAGCGCCTGAAGCACTGGTTTGACTGCCT...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTCGCTGGTGAGCGTGTaGCAGCGCTCGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPSLVSV*QRSMRL
Trigger: CAAGCGCATCGAGCGCTGGCACACGCTCACCAGCGA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCCTCCGAGCGGGGACTaGAGTGGCTCTGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPPPSGD*SGSVSK
Trigger: CTTGGACACAGAGCCACTGCAGTCCCCGCTCGGAGG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCTCGGCCTCCCAAAGTaGTGCAATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAALGLPK*CNYRRE
Trigger: CTCACGCCTGTAATTGCAGCACTTTGGGAGGCCGAG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGAGGTTCACTCGGTTTaGGAAGGAACAACGGGCTCG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAEVHSV*EGTTGS
Trigger: CGAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTTGGTGATGGTGCAGTaGAGGGCGTTGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAALVMVQ*RALFSW
Trigger: CCAGGAGAACAACGCCCTCCACTGCACCATCACCAA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGCTTATTTGCCTTACTaGCTCCTGGCAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVAYLPY*LLAAGA
Trigger: TGCACCTGCTGCCAGGAGCCAGTAAGGCAAATAAGC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCGCTCCCCCTTGGCGTaGATGCCCAGAACCACACCA +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRSPLA*MPRTTP
Trigger: TGGTGTGGTTCTGGGCATCCACGCCAAGGGGGAGCG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGCACCCCGGCCCCATTaGCTTTCTCTCTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSAPRPH*LSLSRR
Trigger: ACGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCTGGCTGTGTGGCCTTaGCAAACTACTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVLAVWP*QTTQTL
Trigger: CAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCAAGAGGGAAGGGACTaGGGGTACCGACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSQEGRD*GYRPPE
Trigger: CTCTGGGGGTCGGTACCCCCAGTCCCTTCCCTCTTG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCAAGAGGGAAGGGACTaGGGGTACCGACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPQEGRD*GYRPPE
Trigger: CTCTGGGGGTCGGTACCCCCAGTCCCTTCCCTCTTG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGGGGTGGCTGAGTTTTaGGGCCAGGTTAGACACCTC +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGGVAEF*GQVRHL
Trigger: GAGGTGTCTAACCTGGCCCCAAAACTCAGCCACCCC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGCCTCCCTGAGTAGCTaGGACTACAGGCGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSASLSS*DYRRAP
Trigger: TGGCGCACGCCTGTAGTCCCAGCTACTCAGGGAGGC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCTCTGTCGCCCAGGCTaGAGTGCAGTGCCGCGATCT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSLCRPG*SAVPRS
Trigger: AGATCGCGGCACTGCACTCCAGCCTGGGCGACAGAG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGCTGGAGGCAGCGCCTaGTTACTGACACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGAGGSA*LLTPGM
Trigger: CATTCCAGGTGTCAGTAACCAGGCGCTGCCTCCAGC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACGGGCGGGGCGGCGCTaGAGGCAGCGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVRAGRR*RQRLVT
Trigger: AGTAACCAGGCGCTGCCTCCAGCGCCGCCCCGCCCG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGAGTGGACAACAGCATaGTCGACAGGTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAEWTTA*STGPGA
Trigger: TGCACCAGGACCTGTCGACCATGCTGTTGTCCACTC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCACGTGTCTCCCCGATaGACTCATTGTGCCGGAATT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAHVSPR*THCAGI
Trigger: AATTCCGGCACAATGAGTTCATCGGGGAGACACGTG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTTCACCCAGCGTTCCTaGGGGGCCCTTGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVFTQRS*GALGRQ
Trigger: CTGCCTACCAAGGGCCCCTCAGGAACGCTGGGTGAA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGCACGCCAATTCCCCTaGAGCGTGGTGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPARQFP*SVVSST
Trigger: AGTGCTGGACACCACGCTTCAGGGGAATTGGCGTGC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAAGGACCTCTCTGGTGTaGGCTCAGCACGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPRTSLV*AQHANS
Trigger: GGAATTGGCGTGCTGAGCTCACACCAGAGAGGTCCT...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCCACCGTCGTGCCTGTaGGTCCCTCTATCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPPPSCL*VPLSVL
Trigger: CAACACCGATAGAGGGACTCACAGGCACGACGGTGG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCACCGTCGTGCCTGTaGGTCCCTCTATCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPPSCL*VPLSVL
Trigger: CAACACCGATAGAGGGACTCACAGGCACGACGGTGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCACCTTGCAGGGCTGTaGACATGCGTTCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCHLAGL*TCVQTS
Trigger: ACTGGTCTGAACGCATGTTCACAGCCCTGCAAGGTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCACCTGGTGTCTCTGCTaGGTCTCCGACAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGTWCLC*VSDRPR
Trigger: TCTTGGTCTGTCGGAGACTCAGCAGAGACACCAGGT...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGCATCGACCAGCCGTGTaGTTCTGTAAAAGTATTTTA +
Preference number: 4 (lower is better)
Translates to: FAKEQRARHARPGLGGRTHRPAV*FCKSIL
Trigger: TAAAATACTTTTACAGAATCACACGGCTGGTCGATG...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCGGCTGTTTGTTGGATaGGTGGACAACAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAARLFVG*VDNSMV
Trigger: GACCATGCTGTTGTCCACTCATCCAACAAACAGCCG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAACAGGCCTTGGTGGCTaGTGGGGAAGCCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVTGLGG*WGSPGP
Trigger: CGGCCCCGGGCTTCCCCAGCAGCCACCAAGGCCTGT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGTAGTGGGACCAAGATaGCACGAGCAAGCACCCGGA +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPVVGPR*HEQAPG
Trigger: TCCGGGTGCTTGCTCGTGGCATCTTGGTCCCACTAC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGGTGTGCTTTGTGTCTaGAGTGGAAGGTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGGVLCV*SGRSHR
Trigger: ACGGTGGGACCTTCCACTGCAGACACAAAGCACACC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTTCTTGTCCCAGCTGTaGCCCTTCAGGCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCFLSQL*PFRPLS
Trigger: TGAAAGGGGCCTGAAGGGGCACAGCTGGGACAAGAA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGGTCCCAGCCCCATTTaGACAGCCTGGGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSGPSPI*TAWAVE
Trigger: CTCTACTGCCCAGGCTGTGCAAATGGGGCTGGGACC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGCGATCTTGGCTCACTaGAGCCTTCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPAILAH*SLHLPG
Trigger: ACCCGGGAGGTGAAGGCTGCAGTGAGCCAAGATCGC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCGCTCCCCCTTGGCGTaGATGCCCAGAACCACACCA +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVRSPLA*MPRTTP
Trigger: TGGTGTGGTTCTGGGCATCCACGCCAAGGGGGAGCG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTCCAAGCAGGGGTTCTaGATCTCCCCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPSKQGF*ISPSVG
Trigger: CCCCACACTGGGGGAGATCCAGAACCCCTGCTTGGA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGCACCCCGGCCCCATTaGCTTTCTCTCTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVAPRPH*LSLSRR
Trigger: ACGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGCAGAGAAAGTTTGTaGGCTTCAGGCATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGRESL*ASGMGP
Trigger: GGGGCCCATGCCTGAAGCCCACAAACTTTCTCTGCC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGGGTGGCTGAGTTTTaGGGCCAGGTTAGACACCTC +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGVAEF*GQVRHL
Trigger: GAGGTGTCTAACCTGGCCCCAAAACTCAGCCACCCC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGAGTGGACAACAGCATaGTCGACAGGTCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCEWTTA*STGPGA
Trigger: TGCACCAGGACCTGTCGACCATGCTGTTGTCCACTC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCACGTGTCTCCCCGATaGACTCATTGTGCCGGAATT +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGHVSPR*THCAGI
Trigger: AATTCCGGCACAATGAGTTCATCGGGGAGACACGTG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCATCTCCAGGCAGATGCTaGAGGTCTTGGTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPSPGRC*RSWCGW
Trigger: CCAACCACACCAAGACCTTCAGCATCTGCCTGGAGA...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGCCCTGGACGGCCACTaGTTACTCCCAAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPALDGH*LLPKGT
Trigger: TGTCCCTTTTGGGAGTAATCAGTGGCCGTCCAGGGC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCTACCTCAGCCTCCTaGAAAGCTGGGGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPTSAS*KAGATG
Trigger: ACCTGTAGCCCCAGCTTTTCAGGAGGCTGAGGTAGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCCGATGAACTCATTGTaGCGGAATTTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVPMNSL*RNLSSS
Trigger: TGACGAGGACAAATTCCGGCACAATGAGTTCATCGG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCTCCACCTGTCTGTCTaGTCACCACCTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSLHLSV*SPPPSS
Trigger: AGAGGAGGGAGGTGGTGAGCAGACAGACAGGTGGAG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGTAGTGGGACCAAGATaGCACGAGCAAGCACCCGGA +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPVVGPR*HEQAPG
Trigger: TCCGGGTGCTTGCTCGTGGCATCTTGGTCCCACTAC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGTGTGCTTTGTGTCTaGAGTGGAAGGTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGVLCV*SGRSHR
Trigger: ACGGTGGGACCTTCCACTGCAGACACAAAGCACACC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGTCCCAGCCCCATTTaGACAGCCTGGGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGPSPI*TAWAVE
Trigger: CTCTACTGCCCAGGCTGTGCAAATGGGGCTGGGACC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCCTCAGTTTGAATCCTaGTTCTGCCATCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCPQFES*FCHRPA
Trigger: GGCTGGTCGATGGCAGAAGCAGGATTCAAACTGAGG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGGGTCTCGTTCCATGTaGGGTTCAGAGTGTTACGGA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCGSRSM*GSECYG
Trigger: TCCGTAACACTCTGAACCCCACATGGAACGAGACCC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCTCTCAGCCGGGGCTaGCCTCTAGAAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPLSRG*PLEGSL
Trigger: CAAAGACCCTTCTAGAGGCCAGCCCCGGCTGAGAGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAAATTCCCCTGAAGCGTaGTGTCCAGCACTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPNSPEA*CPALWA
Trigger: AGCCCAGAGTGCTGGACACCACGCTTCAGGGGAATT...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCTGGCTGTGTGGCCTTaGCAAACTACTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGLAVWP*QTTQTL
Trigger: CAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAG...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGCCCCTTTCACCCACTaGGCCTCACATTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPAPFTH*ASHSPC
Trigger: ACATGGGGAATGTGAGGCCCAGTGGGTGAAAGGGGC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGTGTGTGTAGAGGCGTaGTTTCTCCATGTTGACCAG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAVCVEA*FLHVDQ
Trigger: CTGGTCAACATGGAGAAACCACGCCTCTACACACAC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGGCCCTTGGCCTTGGTaGTGGTGCAGTGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVGPWPW*WCSGGR
Trigger: ACGCCCTCCACTGCACCATCACCAAGGCCAAGGGCC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACCAGGTCCCCATGCTTaGTCTCGTAACAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPPGPHA*SRNRTP
Trigger: AGGAGTTCTGTTACGAGATCAAGCATGGGGACCTGG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCGTAATCCCAAACGGTaGCCTCCAGGGACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPRNPKR*PPGTSW
Trigger: CCAAGAAGTCCCTGGAGGTCACCGTTTGGGATTACG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCACCTTGCAGGGCTGTaGACATGCGTTCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPHLAGL*TCVQTS
Trigger: ACTGGTCTGAACGCATGTTCACAGCCCTGCAAGGTG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTGGGCTGCCTCAGTTTaGATCCTGCTTCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSWAASV*ILLLPS
Trigger: CGATGGCAGAAGCAGGATTCAAACTGAGGCAGCCCA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTTGTCCACCGGCAGCTaGTTCTCCAGGCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVLSTGS*FSRQML
Trigger: CAGCATCTGCCTGGAGAAGCAGCTGCCGGTGGACAA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACCTACCAGCAGGCCTTaGTTCTGTGAGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPPTSRP*FCELYL
Trigger: CAAGTACAGCTCACAGAAGCAAGGCCTGCTGGTAGG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCTCCACCTGTCTGTCTaGTCACCACCTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVLHLSV*SPPPSS
Trigger: AGAGGAGGGAGGTGGTGAGCAGACAGACAGGTGGAG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGAGTTCCTGCCCGAGTaGCTGTGCTGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVEFLPE*LCCPWA
Trigger: AGCCCAGGGGCAGCACAGGCACTCGGGCAGGAACTC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGAGGTTCACTCGGTTTaGGAAGGAACAACGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSEVHSV*EGTTGS
Trigger: CGAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCAGGTCTTGGTGTGGTTaGGTTTCAGCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGRSWCG*VSASSG
Trigger: CCCTGAAGAAGCTGAAACCCAACCACACCAAGACCT...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGCTTATTTGCCTTACTaGCTCCTGGCAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPAYLPY*LLAAGA
Trigger: TGCACCTGCTGCCAGGAGCCAGTAAGGCAAATAAGC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCACACCAGTTTCTCCATaGTGTTTCCATCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCTPVSP*CFHHVP
Trigger: GGGGACGTGATGGAAACACCATGGAGAAACTGGTGT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTACTCTCAAGCCTCCTaGGGAGTCTCACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSYSQAS*GVSLRG
Trigger: TCCCCTGAGTGAGACTCCCCAGGAGGCTTGAGAGTA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTACTCTCAAGCCTCCTaGGGAGTCTCACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPYSQAS*GVSLRG
Trigger: TCCCCTGAGTGAGACTCCCCAGGAGGCTTGAGAGTA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGCAGAGAAAGTTTGTaGGCTTCAGGCATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGRESL*ASGMGP
Trigger: GGGGCCCATGCCTGAAGCCCACAAACTTTCTCTGCC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCCTTCCTGGCTGTGTaGCCTTGGCAAACTACTCAG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPFLAV*PWQTTQ
Trigger: CTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCTGGTTCACCCCTTCCTaGCTGTGTGGCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPWFTPS*LCGLGK
Trigger: TTTGCCAAGGCCACACAGCCAGGAAGGGGTGAACCA...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTGGTTCACCCCTTCCTaGCTGTGTGGCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPWFTPS*LCGLGK
Trigger: TTTGCCAAGGCCACACAGCCAGGAAGGGGTGAACCA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTAGGATCCAAACTTCCTaGGGAGTTCCTGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRIQTS*GVPARV
Trigger: CACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCAGGATCCAAACTTCCTaGGGAGTTCCTGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPRIQTS*GVPARV
Trigger: CACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCGTGTGTGTAGAGGCGTaGTTTCTCCATGTTGACCAG +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGVCVEA*FLHVDQ
Trigger: CTGGTCAACATGGAGAAACCACGCCTCTACACACAC...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCAGCCTCCTGAAAAGCTaGGGCTACAGGTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPSLLKS*GYRCVP
Trigger: TGGCACACACCTGTAGCCCCAGCTTTTCAGGAGGCT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTAGCCTCCTGAAAAGCTaGGGCTACAGGTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSSLLKS*GYRCVP
Trigger: TGGCACACACCTGTAGCCCCAGCTTTTCAGGAGGCT...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTCCACGGCTGTTTGTTaGATGAGTGGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAASTAVC*MSGQQH
Trigger: ATGCTGTTGTCCACTCATCCAACAAACAGCCGTGGA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCAGGCCTTGCTTCTGTaGGCTGTACTTGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPQALLL*AVLEGD
Trigger: ATCTCCCTCAAGTACAGCTCACAGAAGCAAGGCCTG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGGTCATACAGCAGGCTaGAGTCCAGCGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVGHTAG*SPACPG
Trigger: CCCTGGGCACGCTGGACTTCAGCCTGCTGTATGACC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGGCTTGTGGAATCATTaGGTGAAGCATGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAGLWNH*VKHVPI
Trigger: AATTGGCACATGCTTCACTCAATGATTCCACAAGCC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTTGTTCCCAGCTTCCTaGCTAGATGGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPLFPAS*LDGNSL
Trigger: CAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCTTGTTCCCAGCTTCCTaGCTAGATGGGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPLFPAS*LDGNSL
Trigger: CAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAA...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCTGCAATTACAGGCGTaGGCCATCGTGCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPLQLQA*AIVPQN
Trigger: GTTTTGAGGCACGATGGCTCACGCCTGTAATTGCAG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCGGCTGTTTGTTGGATaGGTGGACAACAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRLFVG*VDNSMV
Trigger: GACCATGCTGTTGTCCACTCATCCAACAAACAGCCG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAAGATCCGCAGGGTCTTaGGGATCATGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPRSAGS*GSCLHL
Trigger: CAGATGAAGACATGATCCGCAAGACCCTGCGGATCT...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGAGCCTCTTCTCGCTTTaGCATTCACTTCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAASLFSL*HSLLCL
Trigger: AAGACACAGAAGTGAATGGCAAAGCGAGAAGAGGCT...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCTCACATTCCCCATGTaGCTAATAAGGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAALTFPM*LIRKSW
Trigger: CCATGACTTCCTTATTAGGCACATGGGGAATGTGAG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTAGGCAGAGCCGCTTCTaGAGCTTCTCAAAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSRQSRF*SFSKRC
Trigger: ACAACGCTTTGAGAAGCTGCAGAAGCGGCTCTGCCT...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTAGGCAGAGCCGCTTCTaGAGCTTCTCAAAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPRQSRF*SFSKRC
Trigger: ACAACGCTTTGAGAAGCTGCAGAAGCGGCTCTGCCT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTAACGGGGTTAAGCAGTaGACGAGAGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVNGVKQ*TRVCVD
Trigger: GTCGACGCAGACTCTCGTGCACTGCTTAACCCCGTT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGGGCTACAGGTGTGTaGCACCACGCTAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGATGV*HHARLI
Trigger: AATTAGCCTAGCGTGGTGGCACACACCTGTAGCCCC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGTGATCTCGGCTCACTaGAATCCCCACTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVVISAH*NPHFPG
Trigger: GCCTGGAAAGTGGGGATTGCAGTGAGCCGAGATCAC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCGGAGTAGGTTTCAGTTaGCTTTTCCTCCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCGVGFS*LFLRLS
Trigger: GGAAAGACGGAGGAAAAGGCAACTGAAACCTACTCC...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGTCGACAGGTCCTGGTaGAAAATGTCTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVVDRSW*KMSWAA
Trigger: GGCAGCCCAAGACATTTTGCACCAGGACCTGTCGAC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTAGGGCGTTGTTCTCCTaGTCATACAGCAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSRALFS*SYSRLK
Trigger: CTTCAGCCTGCTGTATGACCAGGAGAACAACGCCCT...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTTGGTGATGGTGCAGTaGAGGGCGTTGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVLVMVQ*RALFSW
Trigger: CCAGGAGAACAACGCCCTCCACTGCACCATCACCAA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGCAGTTAGGCTTTCTTaGGCTGGAGCAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSAVRLS*AGAASL
Trigger: AAGACTGGCTGCTCCAGCCCAAGAAAGCCTAACTGC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGCAGTTAGGCTTTCTTaGGCTGGAGCAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPAVRLS*AGAASL
Trigger: AAGACTGGCTGCTCCAGCCCAAGAAAGCCTAACTGC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAGCCTCCGGGAACTCTaGCAGACTTTCGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVSLREL*QTFGRQ
Trigger: CTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTGTGGGCTTCAGGCATaGGCCCCAAGATTCAGATAC +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPCGLQA*APRFRY
Trigger: GTATCTGAATCTTGGGGCCCATGCCTGAAGCCCACA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAATGGTCGACAGGTCCTaGTGCAAAATGTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPMVDRS*CKMSWA
Trigger: AGCCCAAGACATTTTGCACCAGGACCTGTCGACCAT...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCAGGTCCCCATGCTTaGTCTCGTAACAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPGPHA*SRNRTP
Trigger: AGGAGTTCTGTTACGAGATCAAGCATGGGGACCTGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGAACCACACCACCAATaGAATCGTTGGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAAEPHHQ*NRWIFQ
Trigger: TTGGAAAATCCAACGATTTCATTGGTGGTGTGGTTC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGCACGCCAATTCCCCTaGAGCGTGGTGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVARQFP*SVVSST
Trigger: AGTGCTGGACACCACGCTTCAGGGGAATTGGCGTGC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGATCTAAAAGGGTGCTaGGATCCTAGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPDLKGC*DPREGR
Trigger: CCTTCCTTCCCTAGGATCTCAGCACCCTTTTAGATC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCTGTCTTTGTGGGGATaGTGGACCCGAGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSLSLWG*WTRVKM
Trigger: CATCTTTACTCGGGTCCATCATCCCCACAAAGACAG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCTGTCTTTGTGGGGATaGTGGACCCGAGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPLSLWG*WTRVKM
Trigger: CATCTTTACTCGGGTCCATCATCCCCACAAAGACAG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTGTGCCAGCGCTCGATaGGCTTGTCCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVCASAR*ACPCSS
Trigger: TGAAGAACAAGGACAAGCGCATCGAGCGCTGGCACA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGTTCAGACCAGTGCATaGAAAAACCTTCACACAAAA +
Preference number: 4 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVVQTSA*KNLHTK
Trigger: TTTTGTGTGAAGGTTTTTGCATGCACTGGTCTGAAC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGAACAGAAAGACAATCTaGACGGGATCTAAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: NSGRLSAGRPASSICPAANRKTI*TGSKRV
Trigger: CACCCTTTTAGATCCCGTGCAGATTGTCTTTCTGTT...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGCGATCTTGGCTCACTaGAGCCTTCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVAILAH*SLHLPG
Trigger: ACCCGGGAGGTGAAGGCTGCAGTGAGCCAAGATCGC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGGGTCTCGTTCCATGTaGGGTTCAGAGTGTTACGGA +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVGSRSM*GSECYG
Trigger: TCCGTAACACTCTGAACCCCACATGGAACGAGACCC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTAGGGCGTTGTTCTCCTaGTCATACAGCAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVRALFS*SYSRLK
Trigger: CTTCAGCCTGCTGTATGACCAGGAGAACAACGCCCT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTATGGTCGACAGGTCCTaGTGCAAAATGTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPMVDRS*CKMSWA
Trigger: AGCCCAAGACATTTTGCACCAGGACCTGTCGACCAT...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTGTGGAATCATTGAGTaGAGCATGTGCCAATTTACC +
Preference number: 4 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGCGIIE*SMCQFT
Trigger: GGTAAATTGGCACATGCTTCACTCAATGATTCCACA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTGTGGAATCATTGAGTaGAGCATGTGCCAATTTACC +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCCGIIE*SMCQFT
Trigger: GGTAAATTGGCACATGCTTCACTCAATGATTCCACA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGGCTTGTGGAATCATTaGGTGAAGCATGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPGLWNH*VKHVPI
Trigger: AATTGGCACATGCTTCACTCAATGATTCCACAAGCC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACAGAGGACCTGGGTTTaGGTCCTGGTTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVQRTWV*VLVHPF
Trigger: GAAGGGGTGAACCAGGACTCAAACCCAGGTCCTCTG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCAAATGGGTCCCTGGTaGAGAGTAACAAGACTATAT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCQMGPW*RVTRLY
Trigger: ATATAGTCTTGTTACTCTTCACCAGGGACCCATTTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTAGATCCGCAGGGTCTTaGGGATCATGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVRSAGS*GSCLHL
Trigger: CAGATGAAGACATGATCCGCAAGACCCTGCGGATCT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCGATGAACTCATTGTaGCGGAATTTGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPMNSL*RNLSSS
Trigger: TGACGAGGACAAATTCCGGCACAATGAGTTCATCGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTGTTCTGAGCTTATTTaGCTTACTGGCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSCSELI*LTGSWQ
Trigger: CTGCCAGGAGCCAGTAAGGCAAATAAGCTCAGAACA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGGAGTAGGTTTCAGTTaGCTTTTCCTCCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPGVGFS*LFLRLS
Trigger: GGAAAGACGGAGGAAAAGGCAACTGAAACCTACTCC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTACACCAGTTTCTCCATaGTGTTTCCATCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVTPVSP*CFHHVP
Trigger: GGGGACGTGATGGAAACACCATGGAGAAACTGGTGT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CAA 72 bp AGAGCCCACGGTACTTGCAGACTGGCCAAGCTGGTCTaGGTATTTCTCACCCCAGTTGGAATGGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RAHGTCRLAKLV*VFLTPVGMVCS
Trigger: GGAACAAACCATTCCAACTGGGGTGAGAAATACCAAGACCAGCTTGGCCAGTCTGCAAGTACCGTGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCAAATCTATTAAAAGGTaGGAGTCTCGCCAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCKSIKR*ESRQGN
Trigger: ATTGCCTTGGCGAGACTCTCACCTTTTAATAGATTT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACAAATGGGTCCCTGGTaGAGAGTAACAAGACTATAT +
Preference number: 4 (lower is better)
Translates to: AGAASLQGPILHLSVCSPQMGPW*RVTRLY
Trigger: ATATAGTCTTGTTACTCTTCACCAGGGACCCATTTG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCATCGACCAGCCGTGTaGTTCTGTAAAAGTATTTTA +
Preference number: 4 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCHRPAV*FCKSIL
Trigger: TAAAATACTTTTACAGAATCACACGGCTGGTCGATG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCTCACATTCCCCATGTaGCTAATAAGGAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: RLSWAGAASLQGPILHLSLTFPM*LIRKSW
Trigger: CCATGACTTCCTTATTAGGCACATGGGGAATGTGAG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATTCTTGTCCCAGCTGTaGCCCTTCAGGCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVFLSQL*PFRPLS
Trigger: TGAAAGGGGCCTGAAGGGGCACAGCTGGGACAAGAA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCTGTTTGTTGGATGAGTaGACAACAGCATGGTCGACA +
Preference number: 4 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPCLLDE*TTAWST
Trigger: TGTCGACCATGCTGTTGTCCACTCATCCAACAAACA...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTCCACGGCTGTTTGTTaGATGAGTGGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVSTAVC*MSGQQH
Trigger: ATGCTGTTGTCCACTCATCCAACAAACAGCCGTGGA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTATGCGTTCAGACCAGTaGATGCAAAAACCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVMRSDQ*MQKPSH
Trigger: GTGTGAAGGTTTTTGCATGCACTGGTCTGAACGCAT...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCAAAATGTCTTGGGCTaGCTCAGTTTGAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVQNVLG*LSLNPA
Trigger: AGCAGGATTCAAACTGAGGCAGCCCAAGACATTTTG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATGTGGGCTTCAGGCATaGGCCCCAAGATTCAGATAC +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVCGLQA*APRFRY
Trigger: GTATCTGAATCTTGGGGCCCATGCCTGAAGCCCACA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGAACCACACCACCAATaGAATCGTTGGATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVEPHHQ*NRWIFQ
Trigger: TTGGAAAATCCAACGATTTCATTGGTGGTGTGGTTC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGATCTAAAAGGGTGCTaGGATCCTAGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVDLKGC*DPREGR
Trigger: CCTTCCTTCCCTAGGATCTCAGCACCCTTTTAGATC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAGGTCTTGGTGTGGTTaGGTTTCAGCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVRSWCG*VSASSG
Trigger: CCCTGAAGAAGCTGAAACCCAACCACACCAAGACCT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
3UTR CAA 72 bp CCTGTGTCTCATTCACCCCCAGGGCTTGTGGAATCATaGAGTGAAGCATGTGCCAATTTACCCATCATCAGG +
Preference number: 4 (lower is better)
Translates to: PVSHSPPGLVES*SEACANLPIIR
Trigger: CCTGATGATGGGTAAATTGGCACATGCTTCACTCAATGATTCCACAAGCCCTGGGGGTGAATGAGACACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGGAACCTGTTTCACCTaGAAGATGGGGATGAGAATC +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVGTCFT*KMGMRI
Trigger: GATTCTCATCCCCATCTTGCAGGTGAAACAGGTTCC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACTGAAGGTCTTGGTGTaGTTGGGTTTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVLKVLV*LGFSFF
Trigger: GAAGAAGCTGAAACCCAACCACACCAAGACCTTCAG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACAAAATGTCTTGGGCTaGCTCAGTTTGAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVQNVLG*LSLNPA
Trigger: AGCAGGATTCAAACTGAGGCAGCCCAAGACATTTTG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR GCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAACAGAAAGACAATCTaGACGGGATCTAAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVNRKTI*TGSKRV
Trigger: CACCCTTTTAGATCCCGTGCAGATTGTCTTTCTGTT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR TCA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAAATCTATTAAAAGGTaGGAGTCTCGCCAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVKSIKR*ESRQGN
Trigger: ATTGCCTTGGCGAGACTCTCACCTTTTAATAGATTT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS CCA 90 bp CCGGCCGTGCTGGGCGCAGGTGGCGGCAGGGGTAGCAGTGGCGGGTaGGCGTCAGTCGCTGAGCACAGCCCCTGGGAGCTCGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: PAVLGAGGGRGSSGG*ASVAEHSPWELAGE
Trigger: CTCACCAGCGAGCTCCCAGGGGCTGTGCTCAGCGACTGACGCCCACCCGCCACTGCTACCCCTGCCGCCACCTGCGCCCAGCACGGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS GCA 90 bp CCCATCAGGGAACACAGCGCCCCTGTACCTCAGGCACTCCCTGGGTaGCTGCCACCTGGGACCACGGAGCCGGCACACGGACCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: PIREHSAPVPQALPG*LPPGTTEPAHGPPS
Trigger: GGACGGGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGTGTTCCCTGATGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS GCA 90 bp TCAGGGAACACAGCGCCCCTGTACCTCAGGCACTCCCTGGGTGCCTaGCACCTGGGACCACGGAGCCGGCACACGGACCCCCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SGNTAPLYLRHSLGA*HLGPRSRHTDPRPW
Trigger: CCAAGGACGGGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGTGTTCCCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS CCA 90 bp GTAGCCCATCAGGGAACACAGCGCCCCTGTACCTCAGGCACTCCCTaGGTGCCTGCCACCTGGGACCACGGAGCCGGCACACGGACCCCC +
Preference number: 5 (lower is better)
Translates to: VAHQGTQRPCTSGTP*VPATWDHGAGTRTP
Trigger: GGGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGTGTTCCCTGATGGGCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGTGCAGTGCCGCGATCTaGGCTCACTGCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: FAKEQRARHARPGLGGRTCSAAI*AHCSLH
Trigger: GTGAAGGCTGCAGTGAGCCAAGATCGCGGCACTGCA...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS TCA 90 bp CACCTGGGACCACGGAGCCGGCACACGGACCCCCGTCCTTGGAGGTaGAGACGTGGCAGGTGGTCACGCGCACGGCACACTCACGTTTTC +
Preference number: 5 (lower is better)
Translates to: HLGPRSRHTDPRPWR*RRGRWSRARHTHVF
Trigger: GAAAACGTGAGTGTGCCGTGCGCGTGACCACCTGCCACGTCTTCACCTCCAAGGACGGGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS-3UTR CAA 90 bp TTTGCGAAGGAACAACGGGCTCGGCATGCACGGCCCGGGCTCGGCGGGCGGACGATTGGCTTCAGGCCCTaGGCCTTGGTGATGGTGCAG +
Preference number: 5 (lower is better)
Translates to: FAKEQRARHARPGLGGRTIGFRP*ALVMVQ
Trigger: CTGCACCATCACCAAGGCCAAGGGCCTGAAGCCAAT...CGTCCGCCCGCCGAGCCCGGGCCGTGCATGCCGAGCCCGTTGTTCCTTCGCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTGGGGGCCACAGGCCTaGGTGGCTGCTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAWGPQA*VAAGEA
Trigger: GGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCCA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS CCA 90 bp ACCACGGAGCCGGCACACGGACCCCCGTCCTTGGAGGTGAAGACGTaGCAGGTGGTCACGCGCACGGCACACTCACGTTTTCACGTAGGG +
Preference number: 5 (lower is better)
Translates to: TTEPAHGPPSLEVKT*QVVTRTAHSRFHVG
Trigger: CCCTACGTGAAAACGTGAGTGTGCCGTGCGCGTGACCACCTGCCACGTCTTCACCTCCAAGGACGGGGGTCCGTGTGCCGGCTCCGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCCGGACGGCCCTGACTaGGCCGCTGCCCGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPPDGPD*AAARSA
Trigger: AGCGGAGCGGGCAGCGGCCAAGTCAGGGCCGTCCGG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTGGGGGCCACAGGCCTaGGTGGCTGCTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCWGPQA*VAAGEA
Trigger: GGCTTCCCCAGCAGCCACCAAGGCCTGTGGCCCCCA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCAGCACCCCGGCCCCATaGGCTTTCTCTCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVSTPAP*AFSLQA
Trigger: CGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGCT...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCGGACGGCCCTGACTaGGCCGCTGCCCGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPDGPD*AAARSA
Trigger: AGCGGAGCGGGCAGCGGCCAAGTCAGGGCCGTCCGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTTCAGGCGCTCCCCCTaGGCGTGGATGCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAFRRSP*AWMPRT
Trigger: GGTTCTGGGCATCCACGCCAAGGGGGAGCGCCTGAA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTCCACCACCGGCCTCTaGGGCCCCAGAGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAASTTGL*GPRELR
Trigger: TCTCAGCTCTCTGGGGCCCAAGAGGCCGGTGGTGGA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTTCAGGCGCTCCCCCTaGGCGTGGATGCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCFRRSP*AWMPRT
Trigger: GGTTCTGGGCATCCACGCCAAGGGGGAGCGCCTGAA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGAGCCCACGGTACTaGCAGACTGGCCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVQSPRY*QTGQAG
Trigger: ACCAGCTTGGCCAGTCTGCAAGTACCGTGGGCTCTG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCGGTCCCAGCCCCATTaGCACAGCCTGGGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAARSQPH*HSLGSR
Trigger: TCTACTGCCCAGGCTGTGCAAATGGGGCTGGGACCG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTGGGGTTTCGCCCTGTaGGCCAGGCGGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAWGFAL*ARRVSN
Trigger: GTTCGAAACCCGCCTGGCCAACAGGGCGAAACCCCA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS GCA 90 bp CGTCAGTCGCTGAGCACAGCCCCTGGGAGCTCGCTGGTGAGCGTGTaGCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: RQSLSTAPGSSLVSV*QRSMRLSLFFRQSN
Trigger: GTTTGACTGCCTGAAGAACAAGGACAAGCGCATCGAGCGCTGGCACACGCTCACCAGCGAGCTCCCAGGGGCTGTGCTCAGCGACTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTTCAGGCCCTTGGCCTaGGTGATGGTGCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAFRPLA*VMVQWR
Trigger: CCTCCACTGCACCATCACCAAGGCCAAGGGCCTGAA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTGGGGTTTCGCCCTGTaGGCCAGGCGGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGWGFAL*ARRVSN
Trigger: GTTCGAAACCCGCCTGGCCAACAGGGCGAAACCCCA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCGGAGGTTCACTCGGTTaGCGAAGGAACAACGGGCTC +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVGGSLG*RRNNGL
Trigger: GAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTCC...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGGTGCAGTGGAGGGCGTaGTTCTCCTGGTCATACAGC +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAVQWRA*FSWSYS
Trigger: GCTGTATGACCAGGAGAACAACGCCCTCCACTGCAC...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCAGCGCTCGATGCGCTaGTCCTTGTTCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAQRSMR*SLFFRQ
Trigger: CTGCCTGAAGAACAAGGACAAGCGCATCGAGCGCTG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCTGGCTGTGCAACTCCTaGGCTCTGCATTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVWLCNS*ALHLFT
Trigger: GGTGAACAAATGCAGAGCCAAGGAGTTGCACAGCCA...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGTCCCTCTATCGGTGTaGAAGGGGTGGGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPVPLSV*KGWAAG
Trigger: GCCTGCTGCCCACCCCTTCAACACCGATAGAGGGAC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCGGTCCCAGCCCCATTaGCACAGCCTGGGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSRSQPH*HSLGSR
Trigger: TCTACTGCCCAGGCTGTGCAAATGGGGCTGGGACCG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCTCCACGGCTGTTTGTaGGATGAGTGGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVLHGCL*DEWTTA
Trigger: TGCTGTTGTCCACTCATCCAACAAACAGCCGTGGAG...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGCAAAACGTAAGACTCTaGGAGCCTCAGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAAQNVRL*EPQTGW
Trigger: CCAGCCCGTCTGAGGCTCCAAGAGTCTTACGTTTTG...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACAGCGCTCGATGCGCTaGTCCTTGTTCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPQRSMR*SLFFRQ
Trigger: CTGCCTGAAGAACAAGGACAAGCGCATCGAGCGCTG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCTCAGAGGACCTGGGTTaGAGTCCTGGTTCACCCCTT +
Preference number: 5 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGSEDLG*SPGSPL
Trigger: AAGGGGTGAACCAGGACTCAAACCCAGGTCCTCTGA...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTTGCAGTGCCGCGATCTaGGCTCACTGCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPCSAAI*AHCSLH
Trigger: GTGAAGGCTGCAGTGAGCCAAGATCGCGGCACTGCA...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTGTGCAGTGGAGGGCGTaGTTCTCCTGGTCATACAGC +
Preference number: 5 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPVQWRA*FSWSYS
Trigger: GCTGTATGACCAGGAGAACAACGCCCTCCACTGCAC...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCATTGGCTTCAGGCCCTaGGCCTTGGTGATGGTGCAG +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPIGFRP*ALVMVQ
Trigger: CTGCACCATCACCAAGGCCAAGGGCCTGAAGCCAAT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCCAGCAGCGTCGATGCGCTTGTCCTaGTTCTTCAGGCAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: NSGRLSAGRPASSICPAASMRLS*FFRQSN
Trigger: GTTTGACTGCCTGAAGAACAAGGACAAGCGCATCGA...CGCTGCTGGACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCCTCTAGAAGGGTCTTaGCTCCCAGATGGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSPLEGS*LPDGRV
Trigger: GACACGCCCATCTGGGAGCAAAGACCCTTCTAGAGG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ATCTCGGCTCACTGCAATCCCCACTTTCCAGGCTCAAGCGATCCTCCTCCTCCTCCTCTAGAAGGGTCTTaGCTCCCAGATGGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: ISAHCNPHFPGSSDPPPPPLEGS*LPDGRV
Trigger: GACACGCCCATCTGGGAGCAAAGACCCTTCTAGAGG...AGGAGGAGGAGGATCGCTTGAGCCTGGAAAGTGGGGATTGCAGTGAGCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCATCAGAGGACCTGGGTTaGAGTCCTGGTTCACCCCTT +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPSEDLG*SPGSPL
Trigger: AAGGGGTGAACCAGGACTCAAACCCAGGTCCTCTGA...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGGAGGTTCACTCGGTTaGCGAAGGAACAACGGGCTC +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPGGSLG*RRNNGL
Trigger: GAGCCCGTTGTTCCTTCGCAAACCGAGTGAACCTCC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGCTTCTTCCATCTGTCATACTCCACGGCTGTTaGTTGGATGAGTGGACAACA +
Preference number: 5 (lower is better)
Translates to: PPGTLADFRPAGPLLPSVILHGC*LDEWTT
Trigger: TGTTGTCCACTCATCCAACAAACAGCCGTGGAGTAT...GACAGATGGAAGAAGCGGGCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCAGAGATCCGCAGGGTCTaGCGGATCATGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPEIRRV*RIMSSS
Trigger: AGATGAAGACATGATCCGCAAGACCCTGCGGATCTC...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCTCATTGTGCCGGAATTaGTCCTCGTCACACACAGAG +
Preference number: 5 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCSLCRN*SSSHTE
Trigger: CTCTGTGTGTGACGAGGACAAATTCCGGCACAATGA...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp TTTACCCATCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCAAGGTCTTGGTGTGGTaGGGTTTCAGCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FTHHQEPPGTLADFRPAGKVLVW*GFSFFR
Trigger: CCTGAAGAAGCTGAAACCCAACCACACCAAGACCTT...GCCTGCCGGCCGAAAGTCTGCCAGAGTTCCCGGAGGCTCCTGATGATGGGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGACTTGTCTTCAGTCTaGTCCACCGGCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSDLSSV*STGSCF
Trigger: GAAGCAGCTGCCGGTGGACAAGACTGAAGACAAGTC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACTGGCCAAGCTGGTCTaGGTATTTCTCACCCCAGTT +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPLAKLV*VFLTPV
Trigger: AACTGGGGTGAGAAATACCAAGACCAGCTTGGCCAG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAGCACCCCGGCCCCATaGGCTTTCTCTCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVSTPAP*AFSLQA
Trigger: CGCCTGGAGAGAGAAAGCCAATGGGGCCGGGGTGCT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTAGGCAGAGAAAGTTaGTGGGCTTCAGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSVGRES*WASGMG
Trigger: GCCCATGCCTGAAGCCCACAAACTTTCTCTGCCTAC...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCCTGGCTGTGTGGCCTaGGCAAACTACTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPPGCVA*ANYSDS
Trigger: AGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCAGCCTCTTCTCGCTTaGCCATTCACTTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCQPLLA*PFTSVS
Trigger: AGACACAGAAGTGAATGGCAAAGCGAGAAGAGGCTG...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACTCCACGGCTGTTTGTaGGATGAGTGGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPLHGCL*DEWTTA
Trigger: TGCTGTTGTCCACTCATCCAACAAACAGCCGTGGAG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCCAAAACGTAAGACTCTaGGAGCCTCAGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPQNVRL*EPQTGW
Trigger: CCAGCCCGTCTGAGGCTCCAAGAGTCTTACGTTTTG...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS TCA 90 bp ATTTTTCTCTCTCCTGTCCGAGATGCACCTGTTGTGCTGGTGCCCTaGGCACATGTGTGGTCGGACGCTTGGGTCATCCGGCGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: IFLSPVRDAPVVLVP*AHVWSDAWVIRRRN
Trigger: ATTCCTACGCCGGATGACCCAAGCGTCCGACCACACATGTGCTCAGGGCACCAGCACAACAGGTGCATCTCGGACAGGAGAGAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609727.1
ENST00000633635.1
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGAGATCCGCAGGGTCTaGCGGATCATGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPEIRRV*RIMSSS
Trigger: AGATGAAGACATGATCCGCAAGACCCTGCGGATCTC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTCCCCGATGAACTCATaGTGCCGGAATTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSSPMNS*CRNLSS
Trigger: CGAGGACAAATTCCGGCACAATGAGTTCATCGGGGA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTGACTTGTCTTCAGTCTaGTCCACCGGCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVDLSSV*STGSCF
Trigger: GAAGCAGCTGCCGGTGGACAAGACTGAAGACAAGTC...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCTGGCTGTGCAACTCCTaGGCTCTGCATTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPWLCNS*ALHLFT
Trigger: GGTGAACAAATGCAGAGCCAAGGAGTTGCACAGCCA...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAGTCCCTCTATCGGTGTaGAAGGGGTGGGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVVPLSV*KGWAAG
Trigger: GCCTGCTGCCCACCCCTTCAACACCGATAGAGGGAC...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTAGAATCAAACCCACCTaGCAGGGCTGTGAACATGCG +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSRIKPT*QGCEHA
Trigger: CGCATGTTCACAGCCCTGCAAGGTGGGTTTGATTCT...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCCTGGCTGTGTGGCCTaGGCAAACTACTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVPGCVA*ANYSDS
Trigger: AGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACAGCCTCTTCTCGCTTaGCCATTCACTTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: AGAASLQGPILHLSVCSPQPLLA*PFTSVS
Trigger: AGACACAGAAGTGAATGGCAAAGCGAGAAGAGGCTG...TGGTGAGCAGACAGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTTCATTGTGCCGGAATTaGTCCTCGTCACACACAGAG +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSSLCRN*SSSHTE
Trigger: CTCTGTGTGTGACGAGGACAAATTCCGGCACAATGA...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCAAGGTCTTGGTGTGGTaGGGTTTCAGCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPKVLVW*GFSFFR
Trigger: CCTGAAGAAGCTGAAACCCAACCACACCAAGACCTT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATTCAGGCCCTTGGCCTaGGTGATGGTGCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVFRPLA*VMVQWR
Trigger: CCTCCACTGCACCATCACCAAGGCCAAGGGCCTGAA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTACAGAGCCCACGGTACTaGCAGACTGGCCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVQSPRY*QTGQAG
Trigger: ACCAGCTTGGCCAGTCTGCAAGTACCGTGGGCTCTG...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp AGGCTTTCTTGGGCTGGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTCGGAGTAGGTTTCAGTaGCCTTTTCCTCCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RLSWAGAASLQGPILHLSRSRFQ*PFPPSF
Trigger: GAAAGACGGAGGAAAAGGCAACTGAAACCTACTCCG...AGACAGGTGGAGGATGGGACCTTGAAGACTGGCTGCTCCAGCCCAAGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCGGGCTTGTGGAATCATaGAGTGAAGCATGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPGLVES*SEACAN
Trigger: ATTGGCACATGCTTCACTCAATGATTCCACAAGCCC...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTCGGAGTAGGTTTCAGTaGCCTTTTCCTCCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVRSRFQ*PFPPSF
Trigger: GAAAGACGGAGGAAAAGGCAACTGAAACCTACTCCG...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GAATGGTTTGTTCCCAGCTTCCTGACTAGATGGGAACTCCCTGAGGGCAGGCCCATACTCCACGGCTGTTaGTTGGATGAGTGGACAACA +
Preference number: 5 (lower is better)
Translates to: EWFVPSFLTRWELPEGRPILHGC*LDEWTT
Trigger: TGTTGTCCACTCATCCAACAAACAGCCGTGGAGTAT...GGGCCTGCCCTCAGGGAGTTCCCATCTAGTCAGGAAGCTGGGAACAAACCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp GGGAAGGAAGGATCCAAACTTCCTGGGGAGTTCCTGCCCGAGTGCCTGTGCTGCACCAAAATACAAAACTaGTCTGTGGGACTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GKEGSKLPGEFLPECLCCTKIQN*SVGLQF
Trigger: AAACTGCAGTCCCACAGACAAGTTTTGTATTTTGGT...GCAGCACAGGCACTCGGGCAGGAACTCCCCAGGAAGTTTGGATCCTTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTAAGAATCAAACCCACCTaGCAGGGCTGTGAACATGCG +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVRIKPT*QGCEHA
Trigger: CGCATGTTCACAGCCCTGCAAGGTGGGTTTGATTCT...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp ACCCCTTCCTGGCTGTGTGGCCTTGGCAAACTACTCAGACTCTGGGAACCTGTTTATAAAGTGTGGGGATaGCTACTAGTCCTAATACAC +
Preference number: 5 (lower is better)
Translates to: TPSWLCGLGKLLRLWEPVYKVWG*LLVLIH
Trigger: GTGTATTAGGACTAGTAGCAATCCCCACACTTTATA...AACAGGTTCCCAGAGTCTGAGTAGTTTGCCAAGGCCACACAGCCAGGAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS-3UTR CAA 90 bp CTTTCACCCACTGGGCCTCACATTCCCCATGTGCCTAATAAGGAAGTCATGGTATATAAAGTGTGGGGATaGCTACTAGTCCTAATACAC +
Preference number: 5 (lower is better)
Translates to: LSPTGPHIPHVPNKEVMVYKVWG*LLVLIH
Trigger: GTGTATTAGGACTAGTAGCAATCCCCACACTTTATA...TACCATGACTTCCTTATTAGGCACATGGGGAATGTGAGGCCCAGTGGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS GCA 72 bp ACAGCGCCCCTGTACCTCAGGCACTCCCTGGGTGCCTaGCACCTGGGACCACGGAGCCGGCACACGGACCCC +
Preference number: 6 (lower is better)
Translates to: TAPLYLRHSLGA*HLGPRSRHTDP
Trigger: GGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS CAA 90 bp TGCCTGCCACCTGGGACCACGGAGCCGGCACACGGACCCCCGTCCTaGGAGGTGAAGACGTGGCAGGTGGTCACGCGCACGGCACACTCA +
Preference number: 6 (lower is better)
Translates to: CLPPGTTEPAHGPPS*EVKTWQVVTRTAHS
Trigger: TGAGTGTGCCGTGCGCGTGACCACCTGCCACGTCTTCACCTCCAAGGACGGGGGTCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS TCA 72 bp CCACGGAGCCGGCACACGGACCCCCGTCCTTGGAGGTaGAGACGTGGCAGGTGGTCACGCGCACGGCACACT +
Preference number: 6 (lower is better)
Translates to: PRSRHTDPRPWR*RRGRWSRARHT
Trigger: AGTGTGCCGTGCGCGTGACCACCTGCCACGTCTTCACCTCCAAGGACGGGGGTCCGTGTGCCGGCTCCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS GCA 72 bp GAACACAGCGCCCCTGTACCTCAGGCACTCCCTGGGTaGCTGCCACCTGGGACCACGGAGCCGGCACACGGA +
Preference number: 6 (lower is better)
Translates to: EHSAPVPQALPG*LPPGTTEPAHG
Trigger: TCCGTGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGTGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS CCA 72 bp CAGGGAACACAGCGCCCCTGTACCTCAGGCACTCCCTaGGTGCCTGCCACCTGGGACCACGGAGCCGGCACA +
Preference number: 6 (lower is better)
Translates to: QGTQRPCTSGTP*VPATWDHGAGT
Trigger: TGTGCCGGCTCCGTGGTCCCAGGTGGCAGGCACCCAGGGAGTGCCTGAGGTACAGGGGCGCTGTGTTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS CCA 72 bp CCGGCACACGGACCCCCGTCCTTGGAGGTGAAGACGTaGCAGGTGGTCACGCGCACGGCACACTCACGTTTT +
Preference number: 6 (lower is better)
Translates to: PAHGPPSLEVKT*QVVTRTAHSRF
Trigger: AAAACGTGAGTGTGCCGTGCGCGTGACCACCTGCCACGTCTTCACCTCCAAGGACGGGGGTCCGTGTGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343572.8
ENST00000633410.1
CDS GCA 72 bp CTGAGCACAGCCCCTGGGAGCTCGCTGGTGAGCGTGTaGCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LSTAPGSSLVSV*QRSMRLSLFFR
Trigger: CCTGAAGAACAAGGACAAGCGCATCGAGCGCTGGCACACGCTCACCAGCGAGCTCCCAGGGGCTGTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3
CDS TCA 72 bp GCACCGCACGATGCCTACCAGCAGGCCTTGCTTCTGTaGGCTGTACTTGAGGGAGATGAGGATGCGGCCCCG +
Preference number: 6 (lower is better)
Translates to: APHDAYQQALLL*AVLEGDEDAAP
Trigger: CGGGGCCGCATCCTCATCTCCCTCAAGTACAGCTCACAGAAGCAAGGCCTGCTGGTAGGCATCGTGCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343572.8
ENST00000496357.4
ENST00000613549.3
ENST00000633410.1
CDS TCA 72 bp AGTGGAGGGCGTTGTTCTCCTGGTCATACAGCAGGCTaGAGTCCAGCGTGCCCAGGGCAGTGCAGTCGTCCG +
Preference number: 6 (lower is better)
Translates to: SGGRCSPGHTAG*SPACPGQCSRP
Trigger: CGGACGACTGCACTGCCCTGGGCACGCTGGACTTCAGCCTGCTGTATGACCAGGAGAACAACGCCCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496357.4
ENST00000609727.1
ENST00000613549.3
ENST00000633635.1
CDS TCA 72 bp TCTCCTGTCCGAGATGCACCTGTTGTGCTGGTGCCCTaGGCACATGTGTGGTCGGACGCTTGGGTCATCCGG +
Preference number: 6 (lower is better)
Translates to: SPVRDAPVVLVP*AHVWSDAWVIR
Trigger: CCGGATGACCCAAGCGTCCGACCACACATGTGCTCAGGGCACCAGCACAACAGGTGCATCTCGGACAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609727.1
ENST00000633635.1
CDS CCA 72 bp GCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTaGTCATACAGCAGGCTGAAGTCCAGCGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: ALVMVQWRALFS*SYSRLKSSVPR
Trigger: CCTGGGCACGCTGGACTTCAGCCTGCTGTATGACCAGGAGAACAACGCCCTCCACTGCACCATCACCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496357.4
ENST00000609727.1
ENST00000613549.3
ENST00000633635.1
CDS GCA 72 bp CTTGGGTCATCCGGCGTAGGAATGAGGGGCAGATTCTaGCCACTTCATCCCCCTTGCGGAGAGTCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: LGSSGVGMRGRF*PLHPPCGESGN
Trigger: GTTCCCTGACTCTCCGCAAGGGGGATGAAGTGGGCAGAATCTGCCCCTCATTCCTACGCCGGATGACCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609727.1
ENST00000633635.1
CDS CAA 72 bp AGGCCCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTaGTTCTCCTGGTCATACAGCAGGCTGAAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RPLALVMVQWRA*FSWSYSRLKSS
Trigger: GCTGGACTTCAGCCTGCTGTATGACCAGGAGAACAACGCCCTCCACTGCACCATCACCAAGGCCAAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496357.4
ENST00000609727.1
ENST00000613549.3
ENST00000633635.1
CDS CCA 72 bp ATTGGCTTCAGGCCCTTGGCCTTGGTGATGGTGCAGTaGAGGGCGTTGTTCTCCTGGTCATACAGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: IGFRPLALVMVQ*RALFSWSYSRL
Trigger: CAGCCTGCTGTATGACCAGGAGAACAACGCCCTCCACTGCACCATCACCAAGGCCAAGGGCCTGAAGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000496357.4
ENST00000609727.1
ENST00000613549.3
ENST00000633635.1
CDS GCA 72 bp GCGGAGAGTCAGGGAACAGCCCATCAACACGTTAGATaGTCTGAGAAGTCCTTACTGGCTCCTGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: AESQGTAHQHVR*SEKSLLAPGSR
Trigger: CCTGCTGCCAGGAGCCAGTAAGGACTTCTCAGAGCATCTAACGTGTTGATGGGCTGTTCCCTGACTCTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609727.1
ENST00000633635.1
CDS CAA 72 bp CAGCAATTTTTCTCTCTCCTGTCCGAGATGCACCTGTaGTGCTGGTGCCCTGAGCACATGTGTGGTCGGACG +
Preference number: 6 (lower is better)
Translates to: QQFFSLLSEMHL*CWCPEHMCGRT
Trigger: CGTCCGACCACACATGTGCTCAGGGCACCAGCACAACAGGTGCATCTCGGACAGGAGAGAGAAAAATTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000609727.1
ENST00000633635.1
CDS TCA 72 bp AATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTaGCCTCCAGGGACTTCTTGGCCAGGTCCCCATGCT +
Preference number: 6 (lower is better)
Translates to: NRWIFQCRNPKR*PPGTSWPGPHA
Trigger: AGCATGGGGACCTGGCCAAGAAGTCCCTGGAGGTCACCGTTTGGGATTACGACATTGGAAAATCCAACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496357.4
ENST00000613549.3