RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000102580

Ensembl transcript IDs: ENST00000376795.6, ENST00000602402.6

Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTGGGAGGTGGCCAGGCCCCCACACATCTCCTGTGCGGCCCTTaGCCCCTTGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGG +
Preference number: 1 (lower is better)
Translates to: QVGGGQAPTHLLCGP*PLVVGNCRALQVER
Trigger: CCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCTGGCCACCTCCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 90 bp CCAGGCCCCCACACATCTCCTGTGCGGCCCTTGACCCCTTGTTGTTaGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATA +
Preference number: 1 (lower is better)
Translates to: PGPHTSPVRPLTPCC*QLSCSPSGKASDLI
Trigger: TATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 90 bp GCAGGAGAAAATCAGAGGCATCAAGATCTGGTAGAAGGGCCGGTCTaGTGTTTAACACATACCAGCAGACAGGTCCCACGTGGGAGGCAC +
Preference number: 1 (lower is better)
Translates to: AGENQRHQDLVEGPV*CLTHTSRQVPRGRH
Trigger: GTGCCTCCCACGTGGGACCTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATGCCTCTGATTTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 90 bp CAGACAGGTCCCACGTGGGAGGCACCACAGACCTTTAAGATAGGGTaGAGCCTTGATAGAAGGAGAAACAGAAGCTGCCCACTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: QTGPTWEAPQTFKIG*SLDRRRNRSCPLSL
Trigger: TAAAGACAGTGGGCAGCTTCTGTTTCTCCTTCTATCAAGGCTTCACCCTATCTTAAAGGTCTGTGGTGCCTCCCACGTGGGACCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 90 bp TCTCAGTCACACATTAGGGTAAGCAGGAGTGACTGTCTCTCCGTTTaGGTGGACACCAGAAAACTGCCGACAGCCATCAAGGCTGAAACT +
Preference number: 1 (lower is better)
Translates to: SQSHIRVSRSDCLSV*VDTRKLPTAIKAET
Trigger: AGTTTCAGCCTTGATGGCTGTCGGCAGTTTTCTGGTGTCCACCCAAACGGAGAGACAGTCACTCCTGCTTACCCTAATGTGTGACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 90 bp AGAGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTaGTTCTCTCTCTTCACTGAAAACAGGCAAGTAACTGCAGGTCAG +
Preference number: 1 (lower is better)
Translates to: REFISLHGTGMWHQS*FSLFTENRQVTAGQ
Trigger: CTGACCTGCAGTTACTTGCCTGTTTTCAGTGAAGAGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 90 bp AGAGAAGAATCTCAGCTCCAGTGTAGAAAAATAATACAGAATACGTaGGCACTTCCACGGGTGAGCCTGCCTCAGACCACTTCCCTCCAG +
Preference number: 1 (lower is better)
Translates to: REESQLQCRKIIQNT*ALPRVSLPQTTSLQ
Trigger: CTGGAGGGAAGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTTCTACACTGGAGCTGAGATTCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR CCA 90 bp ACAACAGATTGCAGAGAATTCATTTCCCTCCATGGCACTGGCATGTaGCACCAGAGCTGCTTCTCTCTCTTCACTGAAAACAGGCAAGTA +
Preference number: 1 (lower is better)
Translates to: TTDCREFISLHGTGM*HQSCFSLFTENRQV
Trigger: TACTTGCCTGTTTTCAGTGAAGAGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 90 bp CTCCGTTTGGGTGGACACCAGAAAACTGCCGACAGCCATCAAGGCTaGAACTCAACAGTTGTTACTTTCTTCATGAATCAGCGAAACAAC +
Preference number: 1 (lower is better)
Translates to: LRLGGHQKTADSHQG*NSTVVTFFMNQRNN
Trigger: GTTGTTTCGCTGATTCATGAAGAAAGTAACAACTGTTGAGTTTCAGCCTTGATGGCTGTCGGCAGTTTTCTGGTGTCCACCCAAACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 90 bp CATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAACCCATTAACCATAAATCTGACAGGG +
Preference number: 1 (lower is better)
Translates to: HKADAGCSVRNRTIP*LLAVANPLTINLTG
Trigger: CCCTGTCAGATTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR GCA 90 bp TGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTaGTTTGCTGTTATGGATGTCCGTGGTCAGGATGCCTCCCACAGT +
Preference number: 1 (lower is better)
Translates to: CPPMFQDMTTDENDL*FAVMDVRGQDASHS
Trigger: ACTGTGGGAGGCATCCTGACCACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 90 bp CCGACAGCCATCAAGGCTGAAACTCAACAGTTGTTACTTTCTTCATaGATCAGCGAAACAACAGATTGCAGAGAATTCATTTCCCTCCAT +
Preference number: 1 (lower is better)
Translates to: PTAIKAETQQLLLSS*ISETTDCREFISLH
Trigger: ATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAAGAAAGTAACAACTGTTGAGTTTCAGCCTTGATGGCTGTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 90 bp GCAGGTGGGAGGTGGCCAGGCCCCCACACATCTCCTGTGCGGCCCTaGACCCCTTGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: AGGRWPGPHTSPVRP*TPCCWQLSCSPSGK
Trigger: CTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCTGGCCACCTCCCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGGAGCACTTCCACGGGTaGGCCTGCCTCAGACCACTT +
Preference number: 2 (lower is better)
Translates to: SVTATLTDHRGANTCTLKEHFHG*ACLRPL
Trigger: AAGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTC...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR TCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTGAGCACTTCCACGGGTaGGCCTGCCTCAGACCACTT +
Preference number: 2 (lower is better)
Translates to: QTSATKPVTIHKATQWLIEHFHG*ACLRPL
Trigger: AAGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTC...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACCAGACAGGTCCCACGTaGGAGGCACCACAGACCTTT +
Preference number: 2 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHQTGPT*EAPQTF
Trigger: AAAGGTCTGTGGTGCCTCCCACGTGGGACCTGTCTG...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTTTGACCCCTTGTTGTTaGCAACTGTCGTGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSLTPCC*QLSCSP
Trigger: TGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAA...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACATGCAAACAAGCCTCTaGGCAGCAGGTGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHMQTSL*AAGGRW
Trigger: CCACCTCCCACCTGCTGCCCAGAGGCTTGTTTGCAT...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGTACACTTGTAGGCACTaGCTTACTCTGCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SVTATLTDHRGANTCTLKYTCRH*LTLQGC
Trigger: ACAGCCTTGCAGAGTAAGTCAGTGCCTACAAGTGTA...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR GCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCCTGAGGCAGGAGAACTaGTTGAACCCGGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: SATKPVTIHKATQWLILLLRQEN*LNPGGV
Trigger: GACACCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAG...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCATAATACAGAATACGTaGGCACTTCCACGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSIIQNT*ALPRVS
Trigger: GCTCACCCGTGGAAGTGCTCACGTATTCTGTATTAT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR GCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: SVTATLTDHRGANTCTLKNRTIP*LLAVAN
Trigger: GTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATT...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR CAA 90 bp AGGGTTCCTAAAAGATGGTCTCTTGCTCCTTCAGTGACAGCCACGTaGACAGACCACAGAGGTGCAAACACATGCACACTAAAGATTTCA +
Preference number: 2 (lower is better)
Translates to: RVPKRWSLAPSVTAT*TDHRGANTCTLKIS
Trigger: TGAAATCTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGAAGGAGCAAGAGACCATCTTTTAGGAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR GCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGTTGCCTCCTTGCCGTTaGAAACCCATTAACCATAAA +
Preference number: 2 (lower is better)
Translates to: SVTATLTDHRGANTCTLKLPPCR*KPINHK
Trigger: TTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAA...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR GCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACCATTCCTTGCCTCCTTaGCGTTGCAAACCCATTAAC +
Preference number: 2 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHHSLPP*RCKPIN
Trigger: GTTAATGGGTTTGCAACGGCAAGGAGGCAAGGAATG...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTATTCATTTCCCTCCATaGCACTGGCATGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: QTSATKPVTIHKATQWLIIHFPP*HWHVAP
Trigger: TGGTGCCACATGCCAGTGCCATGGAGGGAAATGAAT...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 90 bp ATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTaGTGCTTTGCTGTTATGGATGTCCGTGGTCAGGATGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: ICPPMFQDMTTDEND*CFAVMDVRGQDASH
Trigger: GTGGGAGGCATCCTGACCACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR GCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTGGCACTGACTTACTCTaGAAGGCTGTGAAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: QTSATKPVTIHKATQWLIGTDLL*KAVKRR
Trigger: TCTTCTCTTCACAGCCTTGCAGAGTAAGTCAGTGCC...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 90 bp GCAAGAGTAATATTTTCACAAACATCTCCAATGTTTACCTCCTCCTaGCTCGGCTTTCCACTGCAGGTAAGTGTTTCAGCCACAGACAAG +
Preference number: 2 (lower is better)
Translates to: ARVIFSQTSPMFTSS*LGFPLQVSVSATDK
Trigger: CTTGTCTGTGGCTGAAACACTTACCTGCAGTGGAAAGCCGAGCAAGGAGGAGGTAAACATTGGAGATGTTTGTGAAAATATTACTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACTCCTGGCTAACACAGTaGAACCCCATTTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHSWLTQ*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACTGTGTTAGCCAGGA...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR GCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACAAACGATTTGTGCTTTaGTGTTATGGATGTCCGTGG +
Preference number: 2 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHKRFVL*CYGCPW
Trigger: CCACGGACATCCATAACAGCAAAGCACAAATCGTTT...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 90 bp AACTCAACAGTTGTTACTTTCTTCATGAATCAGCGAAACAACAGATaGCAGAGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: NSTVVTFFMNQRNNR*QRIHFPPWHWHVAP
Trigger: TGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAAGAAAGTAACAACTGTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR GCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTGCCTCCTTGCCGTTaGAAACCCATTAACCATAAA +
Preference number: 2 (lower is better)
Translates to: QTSATKPVTIHKATQWLILPPCR*KPINHK
Trigger: TTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAA...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR GCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFNRTIP*LLAVAN
Trigger: GTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATT...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR TCA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTGGATGCCTCCCACAGTaGATTAAAATGCTTGATTTC +
Preference number: 2 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRGCLPQ*IKMLDF
Trigger: GAAATCAAGCATTTTAATTCACTGTGGGAGGCATCC...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR GCA 90 bp TGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATATTTAGGAGAAACAGAAGCTaGCCACTGTCTTTACTTAGA +
Preference number: 2 (lower is better)
Translates to: CCWQLSCSPSGKASDLIFRRNRS*PLSLLR
Trigger: TCTAAGTAAAGACAGTGGGCAGCTTCTGTTTCTCCT...AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CCA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGTGTTATGGATGTCCGTaGTCAGGATGCCTCCCACAG +
Preference number: 2 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVCYGCP*SGCLPQ
Trigger: CTGTGGGAGGCATCCTGACCACGGACATCCATAACA...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGTACACTTGTAGGCACTaGCTTACTCTGCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVYTCRH*LTLQGC
Trigger: ACAGCCTTGCAGAGTAAGTCAGTGCCTACAAGTGTA...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp GTTTCAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTACCTTTAAGATAGGGTaGAGCCTTGATAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: VSGYDYRRKRFVLCCYGCTFKIG*SLDRRR
Trigger: TCTCCTTCTATCAAGGCTTCACCCTATCTTAAAGGT...ACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR TCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCGCAGGTCAGTTAAGATaGCTAAGTAAATCCATGATA +
Preference number: 2 (lower is better)
Translates to: SATKPVTIHKATQWLILLAGQLR*LSKSMI
Trigger: TATCATGGATTTACTTAGTCATCTTAACTGACCTGC...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 72 bp GGTGGCCAGGCCCCCACACATCTCCTGTGCGGCCCTTaGCCCCTTGTTGTTGGCAACTGTCGTGCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: GGQAPTHLLCGP*PLVVGNCRALQ
Trigger: TTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCTGGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 72 bp CACACATCTCCTGTGCGGCCCTTGACCCCTTGTTGTTaGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGT +
Preference number: 3 (lower is better)
Translates to: HTSPVRPLTPCC*QLSCSPSGKAS
Trigger: ACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 72 bp CACATTAGGGTAAGCAGGAGTGACTGTCTCTCCGTTTaGGTGGACACCAGAAAACTGCCGACAGCCATCAAG +
Preference number: 3 (lower is better)
Translates to: HIRVSRSDCLSV*VDTRKLPTAIK
Trigger: CTTGATGGCTGTCGGCAGTTTTCTGGTGTCCACCCAAACGGAGAGACAGTCACTCCTGCTTACCCTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CAA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTGCGGCCCTTGACCCCTaGTTGTTGGCAACTGTCGTG +
Preference number: 3 (lower is better)
Translates to: QTSATKPVTIHKATQWLIAALDP*LLATVV
Trigger: CACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGC...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CAA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACTCTCCTGTGCGGCCCTaGACCCCTTGTTGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHSPVRP*TPCCWQ
Trigger: TTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGA...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp AATCAGAGGCATCAAGATCTGGTAGAAGGGCCGGTCTaGTGTTTAACACATACCAGCAGACAGGTCCCACGT +
Preference number: 3 (lower is better)
Translates to: NQRHQDLVEGPV*CLTHTSRQVPR
Trigger: ACGTGGGACCTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATGCCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp GTGACTGTCTCTCCGTTTGGGTGGACACCAGAAAACTaGCGACAGCCATCAAGGCTGAAACTCAACAGTTGT +
Preference number: 3 (lower is better)
Translates to: VTVSPFGWTPEN*RQPSRLKLNSC
Trigger: ACAACTGTTGAGTTTCAGCCTTGATGGCTGTCGGCAGTTTTCTGGTGTCCACCCAAACGGAGAGACAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR-3UTR CAA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTGCCCTTGACCCCTTGTaGTTGGCAACTGTCGTGCTC +
Preference number: 3 (lower is better)
Translates to: QTSATKPVTIHKATQWLIALDPL*LATVVL
Trigger: GAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGC...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp GTGCGGCCCTTGACCCCTTGTTGTTGGCAACTGTCGTaGTCTCCAAGTGGAAAGGCAAGTGATTTGATATTT +
Preference number: 3 (lower is better)
Translates to: VRPLTPCCWQLS*SPSGKASDLIF
Trigger: AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp ATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTaGTTCTCTCTCTTCACTGAAAACAGGCAAGTAACT +
Preference number: 3 (lower is better)
Translates to: ISLHGTGMWHQS*FSLFTENRQVT
Trigger: AGTTACTTGCCTGTTTTCAGTGAAGAGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 72 bp CGAAACAACAGATTGCAGAGAATTCATTTCCCTCCATaGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: RNNRLQRIHFPP*HWHVAPELLLS
Trigger: AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 72 bp TCTCAGCTCCAGTGTAGAAAAATAATACAGAATACGTaGGCACTTCCACGGGTGAGCCTGCCTCAGACCACT +
Preference number: 3 (lower is better)
Translates to: SQLQCRKIIQNT*ALPRVSLPQTT
Trigger: AGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTTCTACACTGGAGCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR GCA 72 bp TCAGGATATGACTACAGACGAAAACGATTTGTGCTTTaGTGTTATGGATGTCCGTGGTCAGGATGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SGYDYRRKRFVL*CYGCPWSGCLP
Trigger: TGGGAGGCATCCTGACCACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp GATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAACCCATTAACCATAAAT +
Preference number: 3 (lower is better)
Translates to: DAGCSVRNRTIP*LLAVANPLTIN
Trigger: ATTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR-3UTR CAA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCCACATCGAAGCACAGTaGTCCCTAAGAACATACAGC +
Preference number: 3 (lower is better)
Translates to: SATKPVTIHKATQWLILLHIEAQ*SLRTYS
Trigger: GCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTG...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR GCA 72 bp ATGTTTCAGGATATGACTACAGACGAAAACGATTTGTaGTTTGCTGTTATGGATGTCCGTGGTCAGGATGCC +
Preference number: 3 (lower is better)
Translates to: MFQDMTTDENDL*FAVMDVRGQDA
Trigger: GGCATCCTGACCACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 72 bp ATGAAGATTACAGCTCCTTCTTACACTTGTAGGCACTaGCTTACTCTGCAAGGCTGTGAAGAGAAGAATCTC +
Preference number: 3 (lower is better)
Translates to: MKITAPSYTCRH*LTLQGCEEKNL
Trigger: GAGATTCTTCTCTTCACAGCCTTGCAGAGTAAGTCAGTGCCTACAAGTGTAAGAAGGAGCTGTAATCTTCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR TCA 72 bp AATTTGGAAAAGTCAACTACATTCAACAAAGTTGCGTaGACTTCTCTAGGTGATACCATTGCTGTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: NLEKSTTFNKVA*TSLGDTIAVCS
Trigger: TGAGCACACAGCAATGGTATCACCTAGAGAAGTTCACGCAACTTTGTTGAATGTAGTTGACTTTTCCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 72 bp GAAGTGGAGAACATGGCATTCTGTATTTATTTATGTTaGCTGCGCAACTTTACGTTTCTAAACCAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: EVENMAFCIYLC*LRNFTFLNQSC
Trigger: ACAAGACTGGTTTAGAAACGTAAAGTTGCGCAGTCAACATAAATAAATACAGAATGCCATGTTCTCCACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CCA 72 bp GCAACAAAACCGGTTACTATACACAAAGCCACGCAGTaGCTAATTTTACTCTTAAATCAATCATTCAGCAAA +
Preference number: 3 (lower is better)
Translates to: ATKPVTIHKATQ*LILLLNQSFSK
Trigger: TTTGCTGAATGATTGATTTAAGAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR TCA 72 bp ATCAAGGCTGAAACTCAACAGTTGTTACTTTCTTCATaGATCAGCGAAACAACAGATTGCAGAGAATTCATT +
Preference number: 3 (lower is better)
Translates to: IKAETQQLLLSS*ISETTDCREFI
Trigger: AATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAAGAAAGTAACAACTGTTGAGTTTCAGCCTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp AGGTGGCCAGGCCCCCACACATCTCCTGTGCGGCCCTaGACCCCTTGTTGTTGGCAACTGTCGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RWPGPHTSPVRP*TPCCWQLSCSP
Trigger: TGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCTGGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp CCCCCACACATCTCCTGTGCGGCCCTTGACCCCTTGTaGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PPHISCAALDPL*LATVVLSKWKG
Trigger: GCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp AGGCCCCCACACATCTCCTGTGCGGCCCTTGACCCCTaGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RPPHISCAALDP*LLATVVLSKWK
Trigger: TTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp CCACACATCTCCTGTGCGGCCCTTGACCCCTTGTTGTaGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PHISCAALDPLL*ATVVLSKWKGK
Trigger: CTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGATGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTCTCCTGTGCGGCCCTTaGCCCCTTGTTGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSLLCGP*PLVVGN
Trigger: GTTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAG...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGGGCAGGAGAACTGCTTaGACCCGGGAGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQGRRTA*TREVSL
Trigger: CAGGGACACCTCCCGGGTTCAAGCAGTTCTCCTGCC...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTTTGCCGCCGCCTCCTTaGTGGCTCTCTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSLPPPP*WLSASK
Trigger: TTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAA...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGTTCTGTGGAAAGGGTTaGCGCCGCCTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVTATLTDHRGANTCTLKFCGKG*RRLLAG
Trigger: GCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAA...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCAGGAGGAAAGGTGTGTaGCCCACCAGCACGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCRRKGV*PTSTRR
Trigger: CCGGCGCGTGCTGGTGGGCCACACACCTTTCCTCCT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACAGGAGGAAAGGTGTGTaGCCCACCAGCACGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHRRKGV*PTSTRR
Trigger: CCGGCGCGTGCTGGTGGGCCACACACCTTTCCTCCT...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACGAGCACTTCCACGGGTaGGCCTGCCTCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHEHFHG*ACLRPL
Trigger: AAGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTC...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGATGCAAACAAGCCTCTaGGCAGCAGGTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQMQTSL*AAGGRW
Trigger: CCACCTCCCACCTGCTGCCCAGAGGCTTGTTTGCAT...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTCATGGCACTGGCATGTaGCACCAGAGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSHGTGM*HQSCFS
Trigger: AGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATG...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp TGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATATTTCCCGGGAGGTGTCCCTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CCWQLSCSPSGKASDLIFPGRCP*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGGGACACCTCCCGGG...AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACCTGAGGCAGGAGAACTaGTTGAACCCGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHLRQEN*LNPGGV
Trigger: GACACCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAG...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACCAGACAGGTCCCACGTaGGAGGCACCACAGACCTTT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHQTGPT*EAPQTF
Trigger: AAAGGTCTGTGGTGCCTCCCACGTGGGACCTGTCTG...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCGCAGCAGGTGGGAGGTaGCCAGGCCCCCACACATCT +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLAAGGR*PGPHTS
Trigger: AGATGTGTGGGGGCCTGGCCACCTCCCACCTGCTGC...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACTTCCCTCCATGGCACTaGCATGTGGCACCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHFPPWH*HVAPEL
Trigger: CAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAA...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTGTCTCTCCGTTTGGGTaGACACCAGAAAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSVSPFG*TPENCR
Trigger: TCGGCAGTTTTCTGGTGTCCACCCAAACGGAGAGAC...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCTTGCCGCCGCCTCCTTaGTGGCTCTCTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCLPPPP*WLSASK
Trigger: TTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAA...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGATAGTCCCAGCTACTTaGAGGCTGAGGCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SVTATLTDHRGANTCTLKIVPAT*RLRQEN
Trigger: GTTCTCCTGCCTCAGCCTCCAAGTAGCTGGGACTAT...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTCTAAATGGTCCGCCTaGGCTGAAGGGATTGAACCC +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSSKWSA*AEGIEP
Trigger: GGGTTCAATCCCTTCAGCTCAGGCGGACCATTTAGA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCGAGCACTTCCACGGGTaGGCCTGCCTCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFEHFHG*ACLRPL
Trigger: AAGTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTC...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCTTCTGTGGAAAGGGTTaGCGCCGCCTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLFCGKG*RRLLAG
Trigger: GCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAA...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCCCGCCGCCTCCTTGCTaGCTCTCTGCATCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFPPPPC*LSASKG
Trigger: TCCTTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGG...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCCCGCCGCCTCCTTGCTaGCTCTCTGCATCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLPPPPC*LSASKG
Trigger: TCCTTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGG...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTTCTAAATGGTCCGCCTaGGCTGAAGGGATTGAACCC +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLSKWSA*AEGIEP
Trigger: GGGTTCAATCCCTTCAGCTCAGGCGGACCATTTAGA...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGTTGCTGTGTGCTCAGTaGAAACTTTGCAACGCCCAT +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQLLCAQ*KLCNAH
Trigger: ATGGGCGTTGCAAAGTTTTCACTGAGCACACAGCAA...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCTCAGCACCTTCGTACTaGAGATCCACCAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCSAPSY*RSTRTS
Trigger: GCTAGTCCTGGTGGATCTGCAGTACGAAGGTGCTGA...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACTCCTTGCTGGCTCTCTaGATCCAAAGGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHSLLAL*IQRIFS
Trigger: GGAGAAGATCCTTTGGATGCAGAGAGCCAGCAAGGA...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACTGGACACCAGAAAACTaGCGACAGCCATCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHWTPEN*RQPSRL
Trigger: CAGCCTTGATGGCTGTCGGCAGTTTTCTGGTGTCCA...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCTGTTTACCTCCTCCTTaGTCGGCTTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCCLPPP*SAFHCR
Trigger: CCTGCAGTGGAAAGCCGAGCAAGGAGGAGGTAAACA...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACAGAATACAACAGCTGTaGCTAGGGTACGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHRIQQL*LGYASL
Trigger: CAGAGAGGCGTACCCTAGCCACAGCTGTTGTATTCT...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp AAAAGATGGTCTCTTGCTCCTTCAGTGACAGCCACGTaGACAGACCACAGAGGTGCAAACACATGCACACTA +
Preference number: 4 (lower is better)
Translates to: KRWSLAPSVTAT*TDHRGANTCTL
Trigger: TAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGAAGGAGCAAGAGACCATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCATTGAACCCTTGCCATaGGTTCCAGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSIEPLP*VPASVE
Trigger: TTCCACAGAAGCTGGAACTCATGGCAAGGGTTCAAT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACTACACTTGTAGGCACTaGCTTACTCTGCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHYTCRH*LTLQGC
Trigger: ACAGCCTTGCAGAGTAAGTCAGTGCCTACAAGTGTA...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCAAGGGATTGAACCCTTaGCATGAGTTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSKGLNP*HEFQLL
Trigger: CAGAAGCTGGAACTCATGGCAAGGGTTCAATCCCTT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQNRTIP*LLAVAN
Trigger: GTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATT...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACGGCACTGACTTACTCTaGAAGGCTGTGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHGTDLL*KAVKRR
Trigger: TCTTCTCTTCACAGCCTTGCAGAGTAAGTCAGTGCC...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTAGGAGAAACAGAAGCTaGCCACTGTCTTTACTTAGA +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSRRNRS*PLSLLR
Trigger: TCTAAGTAAAGACAGTGGGCAGCTTCTGTTTCTCCT...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTGTTATGGATGTCCGTaGTCAGGATGCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: QTSATKPVTIHKATQWLICYGCP*SGCLPQ
Trigger: CTGTGGGAGGCATCCTGACCACGGACATCCATAACA...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACATTCATTTCCCTCCATaGCACTGGCATGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHIHFPP*HWHVAP
Trigger: TGGTGCCACATGCCAGTGCCATGGAGGGAAATGAAT...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCATAATACAGAATACGTaGGCACTTCCACGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCIIQNT*ALPRVS
Trigger: GCTCACCCGTGGAAGTGCTCACGTATTCTGTATTAT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGTCCTGGCTAACACAGTaGAACCCCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQSWLTQ*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACTGTGTTAGCCAGGA...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGTGAACTTCTCTAGGTaGTACCATTGCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLVNFSR*YHCCVL
Trigger: GAGCACACAGCAATGGTATCACCTAGAGAAGTTCAC...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp TTCATGAATCAGCGAAACAACAGATTGCAGAGAATTCATTTCCCTCCATGGCACTCAGCACCTTCGTACTaGAGATCCACCAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: FMNQRNNRLQRIHFPPWHSAPSY*RSTRTS
Trigger: GCTAGTCCTGGTGGATCTGCAGTACGAAGGTGCTGA...GTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGTTATCTGGGTGCCACTaGAGTGCTAATTTTCGGTAT +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQLSGCH*SANFRY
Trigger: ATACCGAAAATTAGCACTGCAGTGGCACCCAGATAA...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTGTGTCTAATACTTCCTaGTGGGCAAAATATCCACAA +
Preference number: 4 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSVSNTS*WAKYPQ
Trigger: TTGTGGATATTTTGCCCAGCAGGAAGTATTAGACAC...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTTGTGCTTTGCTGTTATaGATGTCCGTGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLCALLL*MSVVRM
Trigger: CATCCTGACCACGGACATCCATAACAGCAAAGCACA...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGGTAATCTTGCTGCAGTaGAGTCCATCTTCAATTGAA +
Preference number: 4 (lower is better)
Translates to: SVTATLTDHRGANTCTLKVILLQ*SPSSIE
Trigger: TTCAATTGAAGATGGACTTCACTGCAGCAAGATTAC...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACGCAAATCCTCTCCTTTaGACGAACTGTATATTCAGC +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHANPLL*TNCIFS
Trigger: GCTGAATATACAGTTCGTTCAAAGGAGAGGATTTGC...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACCCTTCTCGAATCTGCTaGTCATTTTCATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHPSRIC*SFSLCS
Trigger: GGAACACAATGAAAATGATCAGCAGATTCGAGAAGG...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTATCAAATAGGCCTCTaGTCGATCTTTCAGGGCATT +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSYQIGL*SIFQGI
Trigger: AATGCCCTGAAAGATCGAGCAGAGGCCTATTTGATA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTGGAAGTTATCTGGGTaGCACTGCAGTGCTAATTTT +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSWKLSG*HCSANF
Trigger: AAAATTAGCACTGCAGTGGCACCCAGATAACTTCCA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTTGCCTCCTTGCCGTTaGAAACCCATTAACCATAAA +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSLPPCR*KPINHK
Trigger: TTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCAATAGAACCATTCCTTaGCTCCTTGCCGTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCNRTIP*LLAVAN
Trigger: GTTTGCAACGGCAAGGAGGCAAGGAATGGTTCTATT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp TTCATGAATCAGCGAAACAACAGATTGCAGAGAATTCATTTCCCTCCATGGCACGTAGAAGGGCCGGTCTaGTGTTTAACACATACCAGC +
Preference number: 4 (lower is better)
Translates to: FMNQRNNRLQRIHFPPWHVEGPV*CLTHTS
Trigger: GCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTAC...GTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGAGCGAAACAACAGATTaGAGAGAATTCATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQSETTD*REFISL
Trigger: GAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCT...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTCAGCCACAGACAAGTaGAACAAAACCGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSSATDK*NKTGYY
Trigger: ATAGTAACCGGTTTTGTTGCACTTGTCTGTGGCTGA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTTTGACCCCTTGTTGTTaGCAACTGTCGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRLTPCC*QLSCSP
Trigger: TGGAGAGCACGACAGTTGCCAACAACAAGGGGTCAA...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGTGTTTGAGTAATAAGTaGCCTCTCTGTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SVTATLTDHRGANTCTLKCLSNK*PLCNLA
Trigger: AGCAAGATTACAGAGAGGTCACTTATTACTCAAACA...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCGATGAGCTCTTCAGCTaGCTCAATCAGCTTATTAAG +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCDELFS*LNQLIK
Trigger: CTTAATAAGCTGATTGAGTCAGCTGAAGAGCTCATC...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTCCTTCTCGAATCTGCTaGTCATTTTCATTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLPSRIC*SFSLCS
Trigger: GGAACACAATGAAAATGATCAGCAGATTCGAGAAGG...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACGGATGCCTCCCACAGTaGATTAAAATGCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHGCLPQ*IKMLDF
Trigger: GAAATCAAGCATTTTAATTCACTGTGGGAGGCATCC...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTGACAGCCATCAAGGCTaGAACTCAACAGTTGTTACT +
Preference number: 4 (lower is better)
Translates to: QTSATKPVTIHKATQWLIDSHQG*NSTVVT
Trigger: AGTAACAACTGTTGAGTTTCAGCCTTGATGGCTGTC...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCAAGGGATTGAACCCTTaGCATGAGTTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFKGLNP*HEFQLL
Trigger: CAGAAGCTGGAACTCATGGCAAGGGTTCAATCCCTT...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCCATTCCTTGCCTCCTTaGCGTTGCAAACCCATTAAC +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFHSLPP*RCKPIN
Trigger: GTTAATGGGTTTGCAACGGCAAGGAGGCAAGGAATG...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp TTCATGAATCAGCGAAACAACAGATTGCAGAGAATTCATTTCCCTCCATGGCACCATTCCTTGCCTCCTTaGCGTTGCAAACCCATTAAC +
Preference number: 4 (lower is better)
Translates to: FMNQRNNRLQRIHFPPWHHSLPP*RCKPIN
Trigger: GTTAATGGGTTTGCAACGGCAAGGAGGCAAGGAATG...GTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGCTTCTTTCTCATTTCTaGATCAGAGAGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVTATLTDHRGANTCTLKLLSHF*IREDFF
Trigger: AAAGAAGTCCTCTCTGATCCAGAAATGAGAAAGAAG...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR CAA 72 bp ATATTTTCACAAACATCTCCAATGTTTACCTCCTCCTaGCTCGGCTTTCCACTGCAGGTAAGTGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IFSQTSPMFTSS*LGFPLQVSVSA
Trigger: GGCTGAAACACTTACCTGCAGTGGAAAGCCGAGCAAGGAGGAGGTAAACATTGGAGATGTTTGTGAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACTGTTTGAGTAATAAGTaGCCTCTCTGTAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHCLSNK*PLCNLA
Trigger: AGCAAGATTACAGAGAGGTCACTTATTACTCAAACA...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACATGTTTCTCAACATCTaGATTTACTCCACATTCAGC +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHMFLNI*IYSTFS
Trigger: GCTGAATGTGGAGTAAATGCAGATGTTGAGAAACAT...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp GTTTCAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTTCCTTGCTGGCTCTCTaGATCCAAAGGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSGYDYRRKRFVLCCYGCSLLAL*IQRIFS
Trigger: GGAGAAGATCCTTTGGATGCAGAGAGCCAGCAAGGA...ACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCAGAGGTGCAAACACATaGACACTAAAGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCRGANT*TLKISQ
Trigger: CTGTGAAATCTTTAGTGTGCATGTGTTTGCACCTCT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACGACGAAAACGATTTGTaGTTTGCTGTTATGGATGTC +
Preference number: 4 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHDENDL*FAVMDV
Trigger: GACATCCATAACAGCAAAGCACAAATCGTTTTCGTC...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp GTTTCAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTTGTTGGCAACTGTCGTaGTCTCCAAGTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSGYDYRRKRFVLCCYGCCWQLS*SPSGKA
Trigger: TGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACA...ACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCAAACAGGCAAGTAACTaGAGGTCAGTTAAGATGACT +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCKQASN*RSVKMT
Trigger: AGTCATCTTAACTGACCTGCAGTTACTTGCCTGTTT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCATATTCAGCAATGCTTaGCTCTGTTTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSIFSNA*LCFHDR
Trigger: TCTGTCATGAAAACAGAGCCAAGCATTGCTGAATAT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACCTTCTTTCTCATTTCTaGATCAGAGAGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHLLSHF*IREDFF
Trigger: AAAGAAGTCCTCTCTGATCCAGAAATGAGAAAGAAG...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACTCTAATACTTCCTGCTaGGCAAAATATCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHSNTSC*AKYPQS
Trigger: ACTTTGTGGATATTTTGCCCAGCAGGAAGTATTAGA...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp AAAAATAATACAGAATACGTGAGCACTTCCACGGGTGAGCCTGCCTCAGACCACCACAAAGCCACGCAGTaGCTAATTTTACTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: KNNTEYVSTSTGEPASDHHKATQ*LILLLN
Trigger: ATTTAAGAGTAAAATTAGCCACTGCGTGGCTTTGTG...GTGGTCTGAGGCAGGCTCACCCGTGGAAGTGCTCACGTATTCTGTATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp CCTATGTTTCAGGATATGACTACAGACGAAAACGATTaGTGCTTTGCTGTTATGGATGTCCGTGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PMFQDMTTDEND*CFAVMDVRGQD
Trigger: ATCCTGACCACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTGCAAATCCTCTCCTTTaGACGAACTGTATATTCAGC +
Preference number: 4 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRANPLL*TNCIFS
Trigger: GCTGAATATACAGTTCGTTCAAAGGAGAGGATTTGC...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCACCTTTAAGATAGGGTaGAGCCTTGATAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFTFKIG*SLDRRR
Trigger: TCTCCTTCTATCAAGGCTTCACCCTATCTTAAAGGT...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTCTATGTTTCAGGATATaGCTACAGACGAAAACGATT +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLLCFRI*LQTKTI
Trigger: AATCGTTTTCGTCTGTAGTCATATCCTGAAACATAG...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCTTCAACAAAGTTGCGTaGACTTCTCTAGGTGATACC +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFFNKVA*TSLGDT
Trigger: GGTATCACCTAGAGAAGTTCACGCAACTTTGTTGAA...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCATGTTTCTCAACATCTaGATTTACTCCACATTCAGC +
Preference number: 4 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCMFLNI*IYSTFS
Trigger: GCTGAATGTGGAGTAAATGCAGATGTTGAGAAACAT...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCTTATCTGGGTGCCACTaGAGTGCTAATTTTCGGTAT +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFLSGCH*SANFRY
Trigger: ATACCGAAAATTAGCACTGCAGTGGCACCCAGATAA...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR GCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCTGGAAGTTATCTGGGTaGCACTGCAGTGCTAATTTT +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLWKLSG*HCSANF
Trigger: AAAATTAGCACTGCAGTGGCACCCAGATAACTTCCA...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp TGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATATTTTTGCCTCCTTGCCGTTaGAAACCCATTAACCATAAA +
Preference number: 4 (lower is better)
Translates to: CCWQLSCSPSGKASDLIFLPPCR*KPINHK
Trigger: TTTATGGTTAATGGGTTTGCAACGGCAAGGAGGCAA...AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCAAACGATTTGTGCTTTaGTGTTATGGATGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFKRFVL*CYGCPW
Trigger: CCACGGACATCCATAACAGCAAAGCACAAATCGTTT...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTATATTCAGCAATGCTTaGCTCTGTTTTCATGACAGA +
Preference number: 4 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLIFSNA*LCFHDR
Trigger: TCTGTCATGAAAACAGAGCCAAGCATTGCTGAATAT...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
3UTR CAA 72 bp GTTGTTACTTTCTTCATGAATCAGCGAAACAACAGATaGCAGAGAATTCATTTCCCTCCATGGCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: VVTFFMNQRNNR*QRIHFPPWHWH
Trigger: ATGCCAGTGCCATGGAGGGAAATGAATTCTCTGCAATCTGTTGTTTCGCTGATTCATGAAGAAAGTAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCGTAATCTTGCTGCAGTaGAGTCCATCTTCAATTGAA +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLVILLQ*SPSSIE
Trigger: TTCAATTGAAGATGGACTTCACTGCAGCAAGATTAC...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTAGAGGTGCAAACACATaGACACTAAAGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRRGANT*TLKISQ
Trigger: CTGTGAAATCTTTAGTGTGCATGTGTTTGCACCTCT...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCTCCTTAGAAAAGCAGTaGCAAATCCTCTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFSLEKQ*QILSFE
Trigger: TTCAAAGGAGAGGATTTGCCACTGCTTTTCTAAGGA...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGATTGAACCCTTGCCATaGGTTCCAGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVIEPLP*VPASVE
Trigger: TTCCACAGAAGCTGGAACTCATGGCAAGGGTTCAAT...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCTCAAAGAGGTCACAGTaGCATCATATACAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFSKRSQ*HHIQKE
Trigger: TTCCTTTTGTATATGATGTCACTGTGACCTCTTTGA...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCTTCAGAACTGAGGAATaGATTAAATTTTGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SATKPVTIHKATQWLILLFRTEE*IKFCLP
Trigger: CGGGAGACAAAATTTAATTCATTCCTCAGTTCTGAA...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCCCTCTTAACGTCATTTaGAATTACAGGATAAACTGC +
Preference number: 4 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFPLNVI*NYRINC
Trigger: GCAGTTTATCCTGTAATTTCAAATGACGTTAAGAGG...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGGGCACTGACTTACTCTaGAAGGCTGTGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVGTDLL*KAVKRR
Trigger: TCTTCTCTTCACAGCCTTGCAGAGTAAGTCAGTGCC...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp CAGACAAGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTGTGAACGCAAACGCTaGATTTCATCAGATTTTATA +
Preference number: 4 (lower is better)
Translates to: QTSATKPVTIHKATQWLICERKR*ISSDFI
Trigger: TATAAAATCTGATGAAATGCAGCGTTTGCGTTCACA...AATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACTTGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR GCA 90 bp GTTTCAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCTTCAGCTTTCAAATaGAGCATCAAGAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: VSGYDYRRKRFVLCCYGCPSAFK*SIKSAI
Trigger: TATGGCACTCTTGATGCTGCATTTGAAAGCTGAAGG...ACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CCA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTAGTATGGTTTTACAGTaGATAATGCTACCCTACAGT +
Preference number: 4 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRSMVLQ*IMLPYS
Trigger: ACTGTAGGGTAGCATTATCCACTGTAAAACCATACT...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp AGAAGTGGAGAACATGGCATTCTGTATTTATTTATGTaGACTGCGCAACTTTACGTTTCTAAACCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RSGEHGILYLFM*TAQLYVSKPVL
Trigger: CAAGACTGGTTTAGAAACGTAAAGTTGCGCAGTCAACATAAATAAATACAGAATGCCATGTTCTCCACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR TCA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGGCAGGTCAGTTAAGATaGCTAAGTAAATCCATGATA +
Preference number: 4 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVAGQLR*LSKSMI
Trigger: TATCATGGATTTACTTAGTCATCTTAACTGACCTGC...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
3UTR CAA 72 bp ATGTTGACTGCGCAACTTTACGTTTCTAAACCAGTCTaGTTACATGAAATTCCCTATAAAAACTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: MLTAQLYVSKPV*LHEIPYKNSEL
Trigger: AAGTTCTGAGTTTTTATAGGGAATTTCATGTAACAAGACTGGTTTAGAAACGTAAAGTTGCGCAGTCAACAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS TCA 90 bp GGCTGGTCACGGAGCCGGGGGCCACCATGTCCGAGGGCTCGCGAGTaGAGAGGAGGAAAGGTGTGTGGCCCACCAGCACGCGCCGGCGCT +
Preference number: 5 (lower is better)
Translates to: GWSRSRGPPCPRARE*RGGKVCGPPARAGA
Trigger: AGCGCCGGCGCGTGCTGGTGGGCCACACACCTTTCCTCCTCTTCACTCGCGAGCCCTCGGACATGGTGGCCCCCGGCTCCGTGACCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCCTTCTGTGGAAAGGGTaGCCGCCGCCTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSLLWKG*PPPPCW
Trigger: CCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAAG...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp AGAATTCATTTCCCTCCATGGCACTGGCATGTGGCACCAGAGCTGCTTCTCTCTTCTCCTGTGCGGCCCTaGACCCCTTGTTGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: RIHFPPWHWHVAPELLLSSPVRP*TPCCWQ
Trigger: TTGCCAACAACAAGGGGTCAAGGGCCGCACAGGAGA...AGAGAGAAGCAGCTCTGGTGCCACATGCCAGTGCCATGGAGGGAAATGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS GCA 90 bp CCAGCTTCTGTGGAAAGGGTTGCCGCCGCCTCCTTGCTGGCTCTCTaGATCCAAAGGATCTTCTCCGTCGTCAAACTTCTTTCTCATTTC +
Preference number: 5 (lower is better)
Translates to: PASVERVAAASLLAL*IQRIFSVVKLLSHF
Trigger: GAAATGAGAAAGAAGTTTGACGACGGAGAAGATCCTTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGTTGCCGCCGCCTCCTaGCTGGCTCTCTGCATCCAA +
Preference number: 5 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLVAAAS*LALCIQ
Trigger: TTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAAC...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCCTTCTGTGGAAAGGGTaGCCGCCGCCTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCLLWKG*PPPPCW
Trigger: CCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAAG...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGCTTGACCCCTTGTTGTaGGCAACTGTCGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SVTATLTDHRGANTCTLKLDPLL*ATVVLS
Trigger: GGAGAGCACGACAGTTGCCAACAACAAGGGGTCAAG...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp GGGCAAAATATCCACAAAGTACAGACCACTGATAACTCCACCCATGAAGCTCACAGGCAGGAGAACTGCTaGAACCCGGGAGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: GQNIHKVQTTDNSTHEAHRQENC*NPGGVP
Trigger: AGGGACACCTCCCGGGTTCAAGCAGTTCTCCTGCCT...GTGAGCTTCATGGGTGGAGTTATCAGTGGTCTGTACTTTGTGGATATTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCGTTGCCGCCGCCTCCTaGCTGGCTCTCTGCATCCAA +
Preference number: 5 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFVAAAS*LALCIQ
Trigger: TTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAAC...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGATGTTTACCTCCTCCTaGCTCGGCTTTCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQMFTSS*LGFPLQ
Trigger: CTGCAGTGGAAAGCCGAGCAAGGAGGAGGTAAACAT...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTGCGGCCCTTGACCCCTaGTTGTTGGCAACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRAALDP*LLATVV
Trigger: CACGACAGTTGCCAACAACAAGGGGTCAAGGGCCGC...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp CCAGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTCCTGAGCTGAAGGGATaGAACCCTTGCCATGAGTTC +
Preference number: 5 (lower is better)
Translates to: PDSIKQMQAALSEIEPFLPELKG*NPCHEF
Trigger: GAACTCATGGCAAGGGTTCAATCCCTTCAGCTCAGG...AAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp TGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATATTTGCCCTTGACCCCTTGTaGTTGGCAACTGTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: CCWQLSCSPSGKASDLIFALDPL*LATVVL
Trigger: GAGCACGACAGTTGCCAACAACAAGGGGTCAAGGGC...AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGTTCAGGGCATTCACATaGTCAGGTTCCATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQFRAFT*SGSICK
Trigger: TTTACAGATGGAACCTGACAATGTGAATGCCCTGAA...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCCACATCGAAGCACAGTaGTCCCTAAGAACATACAGC +
Preference number: 5 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCHIEAQ*SLRTYS
Trigger: GCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTG...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp TGTTGTTGGCAACTGTCGTGCTCTCCAAGTGGAAAGGCAAGTGATTTGATATTTTATAGTCCCAGCTACTaGGAGGCTGAGGCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: CCWQLSCSPSGKASDLIFYSPSY*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCAAGTAGCTGGGACTATA...AAATATCAAATCACTTGCCTTTCCACTTGGAGAGCACGACAGTTGCCAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp CATCAAGATCTGGTAGAAGGGCCGGTCTGCTGTTTAACACATACCAGCAGACAGGCTGCAAGTAATTTCTaGCCCAATTCAAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: HQDLVEGPVCCLTHTSRQAASNF*PNSRCF
Trigger: GAAACATCTTGAATTGGGCAAGAAATTACTTGCAGC...CTGTCTGCTGGTATGTGTTAAACAGCAGACCGGCCCTTCTACCAGATCTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp TCAGTGACAGCCACGTTGACAGACCACAGAGGTGCAAACACATGCACACTAAAGAGTGCAGCTTTTGATTaGCCCATAGCTAAAAAGACA +
Preference number: 5 (lower is better)
Translates to: SVTATLTDHRGANTCTLKSAAFD*PIAKKT
Trigger: TGTCTTTTTAGCTATGGGCAAATCAAAAGCTGCACT...CTTTAGTGTGCATGTGTTTGCACCTCTGTGGTCTGTCAACGTGGCTGTCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCAGTGCAGCTTTTGATTaGCCCATAGCTAAAAAGACA +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSSAAFD*PIAKKT
Trigger: TGTCTTTTTAGCTATGGGCAAATCAAAAGCTGCACT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCTTCAGGGCATTCACATaGTCAGGTTCCATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCFRAFT*SGSICK
Trigger: TTTACAGATGGAACCTGACAATGTGAATGCCCTGAA...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCCACATCGAAGCACAGTaGTCCCTAAGAACATACAGC +
Preference number: 5 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFHIEAQ*SLRTYS
Trigger: GCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTG...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCACAGACGAAAACGATTaGTGCTTTGCTGTTATGGAT +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSTDEND*CFAVMD
Trigger: ATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCATTTTGTCTCCCGTTTaGGAACCTTTTCACAATGCT +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSILSPV*EPFHNA
Trigger: AGCATTGTGAAAAGGTTCCAAAACGGGAGACAAAAT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp GTTTCAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTTGCTCAGTGAAAACTTaGCAACGCCCATCACCAGGG +
Preference number: 5 (lower is better)
Translates to: VSGYDYRRKRFVLCCYGCCSVKT*QRPSPG
Trigger: CCCTGGTGATGGGCGTTGCAAAGTTTTCACTGAGCA...ACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCTATCATTCTTCAACTTaGACGCAGCTTTTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSYHSST*TQLLSH
Trigger: GTGACTTAAAAGCTGCGTCAAAGTTGAAGAATGATA...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ATTTCACAGCTACTCACAAGTGACGAGACTGACCACATCGAAGCACAGTTGTCCATGACAGATTCATATTaGCTGGTAGCATCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: ISQLLTSDETDHIEAQLSMTDSY*LVASVY
Trigger: ATACACAGATGCTACCAGCAAATATGAATCTGTCAT...GGACAACTGTGCTTCGATGTGGTCAGTCTCGTCACTTGTGAGTAGCTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp AAAAATTTGTCCACCTATGTTTCAGGATATGACTACAGACGAAAACGATTTGTGCCTGAGCTGAAGGGATaGAACCCTTGCCATGAGTTC +
Preference number: 5 (lower is better)
Translates to: KNLSTYVSGYDYRRKRFVPELKG*NPCHEF
Trigger: GAACTCATGGCAAGGGTTCAATCCCTTCAGCTCAGG...CACAAATCGTTTTCGTCTGTAGTCATATCCTGAAACATAGGTGGACAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp CAGGATATGACTACAGACGAAAACGATTTGTGCTTTGCTGTTATGGATGTCCGTAAAACGATTTGTGCTTaGCTGTTATGGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: QDMTTDENDLCFAVMDVRKTICA*LLWMSV
Trigger: CACGGACATCCATAACAGCAAAGCACAAATCGTTTT...ACGGACATCCATAACAGCAAAGCACAAATCGTTTTCGTCTGTAGTCATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS-3UTR CAA 90 bp AGACAGCATAAAGCAGATGCAGGCTGCTCTGTCAGAAATAGAACCATTCCTTGCGCGTTGTCAAGTTTATaGGTAAGAAATAGACTCCTA +
Preference number: 5 (lower is better)
Translates to: RQHKADAGCSVRNRTIPCALSSL*VRNRLL
Trigger: TAGGAGTCTATTTCTTACCAATAAACTTGACAACGC...GCAAGGAATGGTTCTATTTCTGACAGAGCAGCCTGCATCTGCTTTATGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS TCA 90 bp GCTGGTAGCATCTGTGTATCTGCCATCTCTGATGAGCTCTTCAGCTaGCTCAATCAGCTTATTAAGTTTCTTTACTTGTTTATAGTGTGC +
Preference number: 5 (lower is better)
Translates to: AGSICVSAISDELFS*LNQLIKFLYLFIVC
Trigger: GCACACTATAAACAAGTAAAGAAACTTAATAAGCTGATTGAGTCAGCTGAAGAGCTCATCAGAGATGGCAGATACACAGATGCTACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp ACTGACCACATCGAAGCACAGTTGTCCCTAAGAACATACAGCTCAAAAATGTTCGCTGCAAGTAATTTCTaGCCCAATTCAAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: TDHIEAQLSLRTYSSKMFAASNF*PNSRCF
Trigger: GAAACATCTTGAATTGGGCAAGAAATTACTTGCAGC...GAACATTTTTGAGCTGTATGTTCTTAGGGACAACTGTGCTTCGATGTGGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS GCA 90 bp ACTGAGATAAAGCATCAGCTAGCTGTCCAGCTGCAAGTAATTTCTTaGCCAATTCAAGATGTTTCTCAACATCTGCATTTACTCCACATT +
Preference number: 5 (lower is better)
Translates to: TEIKHQLAVQLQVIS*PIQDVSQHLHLLHI
Trigger: AATGTGGAGTAAATGCAGATGTTGAGAAACATCTTGAATTGGGCAAGAAATTACTTGCAGCTGGACAGCTAGCTGATGCTTTATCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS-3UTR CAA 90 bp AGTGCAACAAAACCGGTTACTATACACAAAGCCACGCAGTGGCTAATTTTACTCATGACAGATTCATATTaGCTGGTAGCATCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: SATKPVTIHKATQWLILLMTDSY*LVASVY
Trigger: ATACACAGATGCTACCAGCAAATATGAATCTGTCAT...GAGTAAAATTAGCCACTGCGTGGCTTTGTGTATAGTAACCGGTTTTGTTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6
CDS CCA 72 bp GGACTAGCAGGAAGGGGAATACCGAGCCCAGCCGGCTaGTCACGGAGCCGGGGGCCACCATGTCCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GLAGRGIPSPAG*SRSRGPPCPRA
Trigger: AGCCCTCGGACATGGTGGCCCCCGGCTCCGTGACCAGCCGGCTGGGCTCGGTATTCCCCTTCCTGCTAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS CCA 72 bp CAGCTTCTGTGGAAAGGGTTGCCGCCGCCTCCTTGCTaGCTCTCTGCATCCAAAGGATCTTCTCCGTCGTCA +
Preference number: 6 (lower is better)
Translates to: QLLWKGLPPPPC*LSASKGSSPSS
Trigger: TGACGACGGAGAAGATCCTTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS GCA 72 bp GTGGAAAGGGTTGCCGCCGCCTCCTTGCTGGCTCTCTaGATCCAAAGGATCTTCTCCGTCGTCAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: VERVAAASLLAL*IQRIFSVVKLL
Trigger: AAGAAGTTTGACGACGGAGAAGATCCTTTGGATGCAGAGAGCCAGCAAGGAGGCGGCGGCAACCCTTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS CAA 72 bp AATTTAAATCTAAATGGTCCGCCTGAGCTGAAGGGATaGAACCCTTGCCATGAGTTCCAGCTTCTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: NLNLNGPPELKG*NPCHEFQLLWK
Trigger: TTTCCACAGAAGCTGGAACTCATGGCAAGGGTTCAATCCCTTCAGCTCAGGCGGACCATTTAGATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS GCA 72 bp AGCTTCATCATACATTTCCTCTATCAAATAGGCCTCTaGTCGATCTTTCAGGGCATTCACATTGTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SFIIHFLYQIGL*SIFQGIHIVRF
Trigger: GAACCTGACAATGTGAATGCCCTGAAAGATCGAGCAGAGGCCTATTTGATAGAGGAAATGTATGATGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS TCA 72 bp TCTGCTTCATCAAGTTTTCCTTGTTTGAGTAATAAGTaGCCTCTCTGTAATCTTGCTGCAGTGAAGTCCATC +
Preference number: 6 (lower is better)
Translates to: SASSSFPCLSNK*PLCNLAAVKSI
Trigger: GATGGACTTCACTGCAGCAAGATTACAGAGAGGTCACTTATTACTCAAACAAGGAAAACTTGATGAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS TCA 72 bp ATCTGTGTATCTGCCATCTCTGATGAGCTCTTCAGCTaGCTCAATCAGCTTATTAAGTTTCTTTACTTGTTT +
Preference number: 6 (lower is better)
Translates to: ICVSAISDELFS*LNQLIKFLYLF
Trigger: AAACAAGTAAAGAAACTTAATAAGCTGATTGAGTCAGCTGAAGAGCTCATCAGAGATGGCAGATACACAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376795.6
ENST00000602402.6
CDS TCA 72 bp AGTATAATCTCCACTTCCAAAAGCGTTAAGTGCTTGTaGACGCAAACGCTGCATTTCATCAGATTTTATAAG +
Preference number: 6 (lower is better)
Translates to: SIISTSKSVKCL*TQTLHFIRFYK
Trigger: CTTATAAAATCTGATGAAATGCAGCGTTTGCGTTCACAAGCACTTAACGCTTTTGGAAGTGGAGATTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602402.6