Pregenerated sensors for DNAJC19 (Homo sapiens)
Ensembl gene IDs: ENSG00000205981Ensembl transcript IDs: ENST00000382564.8, ENST00000469657.5, ENST00000472504.1, ENST00000479269.5, ENST00000482363.1, ENST00000485675.1, ENST00000486355.1, ENST00000491873.5
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACACACACACACACCCCTAGGTCAATTTCTTAGGTCTCAGTTGTaGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: THTHTPLGQFLRSQL*LNSLLNTRFQVSKL Trigger: CAACTTGGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAGAAATTGACCTAGGGGTGTGTGTGTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGGCCAGTTGCCTGTACCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CQASCLYLEQPFHRIRRVSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...GACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCCCTACTTAAACAGCAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PVPGTAFPPNKKSPYLNSSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...GCTGTTTAAGTAGGGACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTGTACCAGTTGCCAGGCCAGTTaGCTGTACCTGGAACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TFKYKVPSIQVARPVACTSCQAS*LYLEQP Trigger: AGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACT...GGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR CAA 90 bp | TCACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTaGCCTGTACCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLNTRFQVSKLPGQ*PVPGTAFPPNKKSP Trigger: GGGACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGGCCAGTTGCCTGTACCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCTATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
|
Preference number: 2 (lower is better) Translates to: CQASCLYLEQPFHRIRRVYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...GACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR CCA 90 bp | AAATTCACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCCCAGTTGCCTGTACCTaGAACAGCCTTTCCACCGAA | + |
|
Preference number: 2 (lower is better) Translates to: KFTFKYKVPSIQVARPVAPVACT*NSLSTE Trigger: TTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGG...GGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR GCA 90 bp | AAATTCACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTCCAAGTATCCAAGTTaGCAGGCCAGTTGCCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: KFTFKYKVPSIQVARPVASKYPS*QASCLY Trigger: GTACAGGCAACTGGCCTGGCAACTTGGATACTTGGA...GGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR CAA 90 bp | TTGTGGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCAAGTaGCCAGGCCAGTTGCCTGTACCTGGAACAGCCTTTCCACCGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LWLNSLLNTRFQVSK*PGQLPVPGTAFPPN Trigger: ATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGAGCTATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
|
Preference number: 2 (lower is better) Translates to: QSNYQFISLPLKWGLPESYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...GCTCTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAAAGTAGACATTATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
|
Preference number: 2 (lower is better) Translates to: GLPESKDCHLHFALKSRHYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...ATGTCTACTTTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR-3UTR GCA 90 bp | TCACAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGTATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
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Preference number: 2 (lower is better) Translates to: SQSNYQFISLPLKWGLPEYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...CTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR CAA 90 bp | AATACACACACACACACACCCCTAGGTCAATTTCTTAGGTCTCAGTaGTGGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: NTHTHTPLGQFLRSQ*WLNSLLNTRFQVSK Trigger: CTTGGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAGAAATTGACCTAGGGGTGTGTGTGTGTGTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR GCA 72 bp | ATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTaGCTGTACCTGGAACAGCCTTTCCACCGAATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IQGSKYPSCQAS*LYLEQPFHRIR Trigger: TCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR CAA 90 bp | CCATTAAAGTGGGGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGTCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLKWGLPESKDCHLHFALSEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...CAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGAGCCATCTTCACTTTGCCTaGAAAAGTAGACATAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSNYQFISLPLKWGLPESHLHFA*KSRHRS Trigger: GGACCTATGTCTACTTTTCAAGGCAAAGTGAAGATG...GCTCTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCCCTACTTAAACAGCTTAAGCTCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PGTAFPPNKKSPYLNSLSSEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...GCTTAAGCTGTTTAAGTAGGGACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR-3UTR CAA 90 bp | TCACAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGTCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
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Preference number: 3 (lower is better) Translates to: SQSNYQFISLPLKWGLPESEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...CTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| 3UTR-3UTR CAA 90 bp | CCCCTAGGTCAATTTCTTAGGTCTCAGTTGTGGTTAAATTCACTTTTAAATACATCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLGQFLRSQLWLNSLLNTSEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...TGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAGAAATTGACCTAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR CCA 72 bp | CACACACCCCTAGGTCAATTTCTTAGGTCTCAGTTGTaGTTAAATTCACTTTTAAATACAAGGTTCCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HTPLGQFLRSQL*LNSLLNTRFQV Trigger: TACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAGAAATTGACCTAGGGGTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CCA 90 bp | CCATTAAAGTGGGGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLKWGLPESKDCHLHFALSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...CAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| CDS-3UTR GCA 90 bp | CAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGAGCAGTTGCCAGGCCAGTTaGCTGTACCTGGAACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QSNYQFISLPLKWGLPESSCQAS*LYLEQP Trigger: AGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACT...GCTCTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CCA 90 bp | AAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTGTACCTGGAACAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KYKVPSIQVARPVACTWNSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...GTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CCA 90 bp | GGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAAAGTAGACATAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GLPESKDCHLHFALKSRHSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...ATGTCTACTTTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| CDS-3UTR CCA 90 bp | TTAAAGTGGGGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAACCAGTTGCCTGTACCTaGAACAGCCTTTCCACCGAA | + |
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Preference number: 4 (lower is better) Translates to: LKWGLPESKDCHLHFALKPVACT*NSLSTE Trigger: TTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGG...TTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| 3UTR CAA 72 bp | AATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTaGCCTGTACCTGGAACAGCCTTTCCACCGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: NTRFQVSKLPGQ*PVPGTAFPPNK Trigger: CTTATTCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR TCA 90 bp | CCTGTACCTGGAACAGCCTTTCCACCGAATAAGAAGAGTCCCTACTTAAACAGCGGCTGCAATGAACTGTaGTTGTACCAGACCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: PVPGTAFPPNKKSPYLNSGCNEL*LYQTCT Trigger: AGTACAGGTCTGGTACAATCACAGTTCATTGCAGCC...GCTGTTTAAGTAGGGACTCTTCTTATTCGGTGGAAAGGCTGTTCCAGGTACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR GCA 90 bp | TCACAGTCTAATTACCAGTTTATCAGTCTCCCATTAAAGTGGGGGCTCCCTGAGTCCAAGTATCCAAGTTaGCAGGCCAGTTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SQSNYQFISLPLKWGLPESKYPS*QASCLY Trigger: GTACAGGCAACTGGCCTGGCAACTTGGATACTTGGA...CTCAGGGAGCCCCCACTTTAATGGGAGACTGATAAACTGGTAATTAGACTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR GCA 90 bp | AATTCACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTTCCAAGTATCCAAGTTaGCAGGCCAGTTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NSLLNTRFQVSKLPGQLPSKYPS*QASCLY Trigger: GTACAGGCAACTGGCCTGGCAACTTGGATACTTGGA...AGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR GCA 90 bp | TTAAAGTGGGGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAATATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
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Preference number: 4 (lower is better) Translates to: LKWGLPESKDCHLHFALKYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...TTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| CDS-3UTR GCA 90 bp | CTTAGGTCTCAGTTGTGGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCAGTTGCCAGGCCAGTTaGCTGTACCTGGAACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LRSQLWLNSLLNTRFQVSSCQAS*LYLEQP Trigger: AGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACT...GGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CCA 90 bp | CTTAGGTCTCAGTTGTGGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCAGTCTCCCATTAAAGTaGGGGCTCCCTGAGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRSQLWLNSLLNTRFQVSSLPLK*GLPESK Trigger: CTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACT...GGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR TCA 90 bp | CCCCTAGGTCAATTTCTTAGGTCTCAGTTGTGGTTAAATTCACTTTTAAATACAGGCTGCAATGAACTGTaGTTGTACCAGACCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: PLGQFLRSQLWLNSLLNTGCNEL*LYQTCT Trigger: AGTACAGGTCTGGTACAATCACAGTTCATTGCAGCC...TGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAGAAATTGACCTAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR GCA 90 bp | CTTAGGTCTCAGTTGTGGTTAAATTCACTTTTAAATACAAGGTTCCAAGTATCCTATTCAGAAGGTGTGTaGTTGCCCATAATTAATACG | + |
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Preference number: 4 (lower is better) Translates to: LRSQLWLNSLLNTRFQVSYSEGV*LPIINT Trigger: CGTATTAATTATGGGCAAGCACACACCTTCTGAATA...GGATACTTGGAACCTTGTATTTAAAAGTGAATTTAACCACAACTGAGACCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS GCA 90 bp | GCTACCACTGTACTGGCCTTACAGGAGTTCCAGGCAAGCAACACCTaGAGAGCCCGTGCGGACAAGAAGCTGGAGAACCGTGCAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: ATTVLALQEFQASNT*RARADKKLENRAER Trigger: TCTTTCTGCACGGTTCTCCAGCTTCTTGTCCGCACGGGCTCTGCAGGTGTTGCTTGCCTGGAACTCCTGTAAGGCCAGTACAGTGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479269.5 |
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| CDS CCA 90 bp | AGTTCCAGGCAAGCAACACCTGCAGAGCCCGTGCGGACAAGAAGCTaGAGAACCGTGCAGAAAGACGATGTAAAAACACAAACCCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SSRQATPAEPVRTRS*RTVQKDDVKTQTPK Trigger: CTTGGGGGTTTGTGTTTTTACATCGTCTTTCTGCACGGTTCTCCAGCTTCTTGTCCGCACGGGCTCTGCAGGTGTTGCTTGCCTGGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000479269.5 |
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| CDS-3UTR CAA 90 bp | GGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAAAGTAGACATAAGTTGCCAGGCCAGTaGCCTGTACCTGGAACAGCC | + |
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Preference number: 5 (lower is better) Translates to: GLPESKDCHLHFALKSRHKLPGQ*PVPGTA Trigger: GGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTT...ATGTCTACTTTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CAA 90 bp | ACTTTTAAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTGTACCAAGTTGCCAGGCCAGTaGCCTGTACCTGGAACAGCC | + |
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Preference number: 5 (lower is better) Translates to: TFKYKVPSIQVARPVACTKLPGQ*PVPGTA Trigger: GGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTT...GGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTTAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS-3UTR CAA 90 bp | AAGTATCCAAGTTGCCAGGCCAGTTGCCTGTACCTGGAACAGCCTTTCCACCGATCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
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Preference number: 5 (lower is better) Translates to: KYPSCQASCLYLEQPFHRSEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...TCGGTGGAAAGGCTGTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS CCA 90 bp | CTAGAGTGCTACCTATGTATGATGTTTGGGAGTGCCAGGGCCACATaGTCAGATCGGATCACTTTAGAATCATATACCTCTGTGTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: LECYLCMMFGSARAT*SDRITLESYTSVCA Trigger: CGCACACACAGAGGTATATGATTCTAAAGTGATCCGATCTGACCATGTGGCCCTGGCACTCCCAAACATCATACATAGGTAGCACTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS-3UTR CAA 90 bp | TTAAAGTGGGGGCTCCCTGAGAGCAAGGACTGTCATCTTCACTTTGCCTTGAAATCAGAAGGTGTGTGCTaGCCCATAATTAATACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LKWGLPESKDCHLHFALKSEGVC*PIINTQ Trigger: TTGCGTATTAATTATGGGCAAGCACACACCTTCTGA...TTTCAAGGCAAAGTGAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000382564.8 ENST00000469657.5 ENST00000486355.1 ENST00000491873.5 |
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| CDS-3UTR CAA 90 bp | AAATACAAGGTTCCAAGTATCCAAGTTGCCAGGCCAGTTGCCTGTACCTGGAACCATCTTCACTTTGCCTaGAAAAGTAGACATAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYKVPSIQVARPVACTWNHLHFA*KSRHRS Trigger: GGACCTATGTCTACTTTTCAAGGCAAAGTGAAGATG...GTTCCAGGTACAGGCAACTGGCCTGGCAACTTGGATACTTGGAACCTTGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382564.8 ENST00000469657.5 |
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| CDS CCA 90 bp | GCAGGAAGCAGGAGAATGGGTCCAAAGCAATCACTTAGAACTTCATaGATATTTGGAAATTTACCCTTCCCTAAGTGTGGCTCTAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: AGSRRMGPKQSLRTS*IFGNLPFPKCGSRF Trigger: AAACCTAGAGCCACACTTAGGGAAGGGTAAATTTCCAAATATCCATGAAGTTCTAAGTGATTGCTTTGGACCCATTCTCCTGCTTCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS TCA 90 bp | ACTAGAATTGTCAAAACCCCATCCAACTCTGTCACATATAACATCTaGTGTTTCAGGGTAGCACCATCACAAAGTTCAGAACTTCTATAC | + |
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Preference number: 5 (lower is better) Translates to: TRIVKTPSNSVTYNI*CFRVAPSQSSELLY Trigger: GTATAGAAGTTCTGAACTTTGTGATGGTGCTACCCTGAAACATCAGATGTTATATGTGACAGAGTTGGATGGGGTTTTGACAATTCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS CCA 90 bp | ACAAAGTTCAGAACTTCTATACTCTCCTTGCAGGAAGCAGGAGAATaGGTCCAAAGCAATCACTTAGAACTTCATGGATATTTGGAAATT | + |
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Preference number: 5 (lower is better) Translates to: TKFRTSILSLQEAGE*VQSNHLELHGYLEI Trigger: AATTTCCAAATATCCATGAAGTTCTAAGTGATTGCTTTGGACCCATTCTCCTGCTTCCTGCAAGGAGAGTATAGAAGTTCTGAACTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS GCA 72 bp | GTACTGGCCTTACAGGAGTTCCAGGCAAGCAACACCTaGAGAGCCCGTGCGGACAAGAAGCTGGAGAACCGT | + |
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Preference number: 6 (lower is better) Translates to: VLALQEFQASNT*RARADKKLENR Trigger: ACGGTTCTCCAGCTTCTTGTCCGCACGGGCTCTGCAGGTGTTGCTTGCCTGGAACTCCTGTAAGGCCAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479269.5 |
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| CDS CCA 72 bp | CAAGCAACACCTGCAGAGCCCGTGCGGACAAGAAGCTaGAGAACCGTGCAGAAAGACGATGTAAAAACACAA | + |
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Preference number: 6 (lower is better) Translates to: QATPAEPVRTRS*RTVQKDDVKTQ Trigger: TTGTGTTTTTACATCGTCTTTCTGCACGGTTCTCCAGCTTCTTGTCCGCACGGGCTCTGCAGGTGTTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479269.5 |
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| CDS GCA 72 bp | TTAACTAGAGTGCTACCTATGTATGATGTTTGGGAGTaGCAGGGCCACATGGTCAGATCGGATCACTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LTRVLPMYDVWE*QGHMVRSDHFR Trigger: TCTAAAGTGATCCGATCTGACCATGTGGCCCTGGCACTCCCAAACATCATACATAGGTAGCACTCTAGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS CCA 72 bp | TACCTATGTATGATGTTTGGGAGTGCCAGGGCCACATaGTCAGATCGGATCACTTTAGAATCATATACCTCT | + |
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Preference number: 6 (lower is better) Translates to: YLCMMFGSARAT*SDRITLESYTS Trigger: AGAGGTATATGATTCTAAAGTGATCCGATCTGACCATGTGGCCCTGGCACTCCCAAACATCATACATAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS TCA 72 bp | GTCAAAACCCCATCCAACTCTGTCACATATAACATCTaGTGTTTCAGGGTAGCACCATCACAAAGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VKTPSNSVTYNI*CFRVAPSQSSE Trigger: TTCTGAACTTTGTGATGGTGCTACCCTGAAACATCAGATGTTATATGTGACAGAGTTGGATGGGGTTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS CCA 72 bp | AGGAGAATGGGTCCAAAGCAATCACTTAGAACTTCATaGATATTTGGAAATTTACCCTTCCCTAAGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RRMGPKQSLRTS*IFGNLPFPKCG Trigger: GCCACACTTAGGGAAGGGTAAATTTCCAAATATCCATGAAGTTCTAAGTGATTGCTTTGGACCCATTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS CCA 72 bp | AGAACTTCTATACTCTCCTTGCAGGAAGCAGGAGAATaGGTCCAAAGCAATCACTTAGAACTTCATGGATAT | + |
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Preference number: 6 (lower is better) Translates to: RTSILSLQEAGE*VQSNHLELHGY Trigger: ATATCCATGAAGTTCTAAGTGATTGCTTTGGACCCATTCTCCTGCTTCCTGCAAGGAGAGTATAGAAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000472504.1 ENST00000482363.1 ENST00000485675.1 |
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| CDS CAA 72 bp | ATTAGGTCCTCTGACCTTGCCATGTCAGAAATCATATaGGTAAAGCCTACAATCACTCTATTCTGTTACACT | + |
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Preference number: 6 (lower is better) Translates to: IRSSDLAMSEII*VKPTITLFCYT Trigger: AGTGTAACAGAATAGAGTGATTGTAGGCTTTACCAATATGATTTCTGACATGGCAAGGTCAGAGGACCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482363.1 ENST00000485675.1 |
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| CDS TCA 72 bp | TATTCTGTTACACTTAATCACAACATATTCAACAGGTaGTCACAGCCAAATCTATTCTTAACTGTGACCACA | + |
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Preference number: 6 (lower is better) Translates to: YSVTLNHNIFNR*SQPNLFLTVTT Trigger: TGTGGTCACAGTTAAGAATAGATTTGGCTGTGATCACCTGTTGAATATGTTGTGATTAAGTGTAACAGAATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482363.1 ENST00000485675.1 |
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