RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC18 (Homo sapiens)

Ensembl gene IDs: ENSG00000170464

Ensembl transcript IDs: ENST00000302060.10, ENST00000505268.1, ENST00000505568.5, ENST00000506870.5, ENST00000507405.5, ENST00000508445.5, ENST00000510770.1, ENST00000512473.5, ENST00000514052.1, ENST00000515277.5, ENST00000515559.2, ENST00000515581.5, ENST00000671853.1, ENST00000671889.1, ENST00000672275.1, ENST00000672364.1, ENST00000672371.1, ENST00000672932.1, ENST00000672997.1, ENST00000673156.1, ENST00000673261.1, ENST00000673423.1, ENST00000673499.1, ENST00000673608.1

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TATGATGGAGTAGGGAGGCTTCGTGGAGGAGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGGCCCCCGCCTCCAGATGCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: YDGVGRLRGGDEARS*IIPSPWPPPPDAAQ
Trigger: CTGAGCAGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGCCTCCCTACTCCATCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp CTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATaGGGAAAAAGAATGACACATAGCTTGGCCAGGCTGCTGGAACCC +
Preference number: 1 (lower is better)
Translates to: LERHSASSQSPSWVS*GKRMTHSLARLLEP
Trigger: GGGTTCCAGCAGCCTGGCCAAGCTATGTGTCATTCTTTTTCCTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 90 bp GGCTCGGTCTTGCATTATACCTTCGCCCTGGCCCCCGCCTCCAGATaGTGCTCAGTAGTTTTAATTTCTGGACTCTCTAAAGGAGAGAGG +
Preference number: 1 (lower is better)
Translates to: GSVLHYTFALAPASR*CSVVLISGLSKGER
Trigger: CCTCTCTCCTTTAGAGAGTCCAGAAATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAATGCAAGACCGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 90 bp ATGCTCTCCCACTTTCTACTTGACACTCAGCCTACCGTCTTGCTCTaGCACTACAAGACCTGGGTCATCCTCTCTGGGCCAATGTTCTCA +
Preference number: 1 (lower is better)
Translates to: MLSHFLLDTQPTVLL*HYKTWVILSGPMFS
Trigger: TGAGAACATTGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CCA 90 bp CTACTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTaGGTCATCCTCTCTGGGCCAATGTTCTCATTCATAGAACCAGGG +
Preference number: 1 (lower is better)
Translates to: LLDTQPTVLLCHYKT*VILSGPMFSFIEPG
Trigger: CCCTGGTTCTATGAATGAGAACATTGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CCA 90 bp GATGTACTTGCTTGTATGGTGTGGCCAGCTGTAACAGAAAGCCACTaGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCAT +
Preference number: 1 (lower is better)
Translates to: DVLACMVWPAVTESH*NGTVPPHKAHPGYH
Trigger: ATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCTTTCTGTTACAGCTGGCCACACCATACAAGCAAGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp GGGAAAGGTTCTGCTTTGCCAGTCTGGCTAGAATCACCTGAGACATaGGGATGCTCTCCCACTTTCTACTTGACACTCAGCCTACCGTCT +
Preference number: 1 (lower is better)
Translates to: GKGSALPVWLESPET*GCSPTFYLTLSLPS
Trigger: AGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGAGCATCCTCATGTCTCAGGTGATTCTAGCCAGACTGGCAAAGCAGAACCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 90 bp TCGGTCTTGCATTATACCTTCGCCCTGGCCCCCGCCTCCAGATGCTaGTCAGTAGTTTTAATTTCTGGACTCTCTAAAGGAGAGAGGGTT +
Preference number: 1 (lower is better)
Translates to: SVLHYTFALAPASRC*SVVLISGLSKGERV
Trigger: AACCCTCTCTCCTTTAGAGAGTCCAGAAATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAATGCAAGACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp TTGAATGAGAGCTTCAGTTTCTGCTTGAGCCTCAAGCCCTATTTCTaGGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGCT +
Preference number: 1 (lower is better)
Translates to: LNESFSFCLSLKPYF*ALLLSHTSPICSNA
Trigger: AGCATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGCTCTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp CAGTTCACTGTATTTTCGAACAATTTCCAACAGAAAGCACAGCAGTaGCGTTTCCTTACTGGTCACTGCTCCCGTGCTGTGAGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: QFTVFSNNFQQKAQQ*RFLTGHCSRAVRPG
Trigger: TCCAGGCCTCACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCACTGCTGTGCTTTCTGTTGGAAATTGTTCGAAAATACAGTGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 90 bp TTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACATTTCTGCTCTaGCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGT +
Preference number: 1 (lower is better)
Translates to: FCRLSRTWWGSTFLL*PSSGVTQMAQLELC
Trigger: ACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR CCA 90 bp GCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCATAGAACCAGGGATAATACATCTACT +
Preference number: 1 (lower is better)
Translates to: AYRLALPLQDLGHPL*ANVLIHRTRDNTST
Trigger: AGTAGATGTATTATCCCTGGTTCTATGAATGAGAACATTGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp TTTCTCACTGCCGATCGTGCGGTAGAGAGAGCATCTTCATTTGAATaGGAGCTTCAGTTTCTGCTTGAGCCTCAAGCCCTATTTCTGAGC +
Preference number: 1 (lower is better)
Translates to: FLTADRAVERASSFE*ELQFLLEPQALFLS
Trigger: GCTCAGAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGCTCTCATTCAAATGAAGATGCTCTCTCTACCGCACGATCGGCAGTGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp AATATGAATGAAGTGCAAGCTCCTGTGAGGAGCAGTGCATGCAGATaGTGTACTTGCTTGTATGGTGTGGCCAGCTGTAACAGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: NMNEVQAPVRSSACR*CTCLYGVASCNRKP
Trigger: TGGCTTTCTGTTACAGCTGGCCACACCATACAAGCAAGTACATCATCTGCATGCACTGCTCCTCACAGGAGCTTGCACTTCATTCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTaGTGTCAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: TQMAQLELCVWVLSS*CQLGCWVLFCMASP
Trigger: AGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR CCA 90 bp GGCCGACTCTCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATaGAGTGTAGGCTACAGTCACTTAATGATCCTTCCAAGTTCAGAG +
Preference number: 1 (lower is better)
Translates to: GRLSTRNFSSNMKEA*SVGYSHLMILPSSE
Trigger: CTCTGAACTTGGAAGGATCATTAAGTGACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGAGAGTCGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 90 bp CTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCT +
Preference number: 1 (lower is better)
Translates to: LQNPCNNYKVWLEGQ*KSPVHLRIHHSEVS
Trigger: AGAGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
3UTR TCA 90 bp TTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTTaGATTTACATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAA +
Preference number: 1 (lower is better)
Translates to: FCMASPLVSVVVSGS*IYMVAGFPPSTKME
Trigger: TTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATGTAAATTCAACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR TCA 90 bp GTTCTCATTCATAGAACCAGGGATAATACATCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAAATATGTGTGAGAGCCCCTGCTTTT +
Preference number: 1 (lower is better)
Translates to: VLIHRTRDNTSTSEL*GGLSKKICVRAPAF
Trigger: AAAAGCAGGGGCTCTCACACATATTTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGATGTATTATCCCTGGTTCTATGAATGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGACTACTCCTGGTCCCTaGAGCCACTCCCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHETTPGP*SHSPGR
Trigger: CCTTCCTGGGGAGTGGCTCCAGGGACCAGGAGTAGT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGCTTGGCCAGGCTGCTaGAACCCATGTTCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEAWPGC*NPCSSG
Trigger: GCCACTGGAACATGGGTTCCAGCAGCCTGGCCAAGC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGATTATACCTTCGCCCTaGCCCCCGCCTCCAGATGCT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEIIPSP*PPPPDA
Trigger: AGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAAT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAACAGCCTGGAGAGCTaGCAATGCCTCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHENSLES*QCLLLG
Trigger: ACCCAGGAGGAGGCATTGCCAGCTCTCCAGGCTGTT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTCGTGCCCATGCTCCTaGCACTCTGCCCAACCAACG +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFSCPCS*HSAQPT
Trigger: CGTTGGTTGGGCAGAGTGGCAGGAGCATGGGCACGA...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGACTCCTGACCTCAGGTaGTCCACCTGCCACAGCCTC +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMTPDLR*STCHSL
Trigger: GAGGCTGTGGCAGGTGGATCACCTGAGGTCAGGAGT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGATGCTCCTGCCACTCTaGCCAACCAACGAAGTTAGC +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEMLLPL*PTNEVS
Trigger: GCTAACTTCGTTGGTTGGGCAGAGTGGCAGGAGCAT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCCTCGGGAAAGGTTCTaGTTTGCCAGTCTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEPRERF*FASLAR
Trigger: TCTAGCCAGACTGGCAAAGCAGAACCTTTCCCGAGG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGTGACGTTTCCTTACTaGTCACTGCTCCCGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEVTFPY*SLLPCC
Trigger: ACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCAC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAGCCTCCTGAGGAGCTaGGATTACAGACACGTGCTA +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHESLLRS*DYRHVL
Trigger: TAGCACGTGTCTGTAATCCCAGCTCCTCAGGAGGCT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGCCTCCTCCTGGGTCTaGCCATCTGCCTCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: MLMSHARHVCVNHGHALGASSWV*PSASVG
Trigger: TCCCACAGAGGCAGATGGTCAGACCCAGGAGGAGGC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGAATCACCTGAGACATaGGGATGCTCTCCCACTTTC +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEESPET*GCSPTF
Trigger: GAAAGTGGGAGAGCATCCTCATGTCTCAGGTGATTC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCCCGGCCTGAGCAGATaGACTCTAGGGTTGCTAATC +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFPGLSR*TLGLLI
Trigger: GATTAGCAACCCTAGAGTTCATCTGCTCAGGCCGGG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTCACCAGTGGAGGGCTaGCTGCCTGTGAGGGACCTC +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRSPVEG*LPVRDL
Trigger: GAGGTCCCTCACAGGCAGGCAGCCCTCCACTGGTGA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCTCCACCTTGCAAGTTaGAGCGATTCTCATGCCTCA +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHELHLAS*SDSHAS
Trigger: TGAGGCATGAGAATCGCTGCAACTTGCAAGGTGGAG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCCTGACTCTGTGGAATaGCTGCAGAGGCATGGTAGG +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFPDSVE*LQRHGR
Trigger: CCTACCATGCCTCTGCAGGCATTCCACAGAGTCAGG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTCCTTACTGGTCACTaGTCCCGTGCTGTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFFLTGH*SRAVRP
Trigger: AGGCCTCACAGCACGGGAGCAGTGACCAGTAAGGAA...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAGAAGGAAGAAAGCATaGATCTGCTCTGGGATGCCC +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHERRKKA*ICSGMP
Trigger: GGGCATCCCAGAGCAGATCCATGCTTTCTTCCTTCT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTTGAGCAAACAGCCTaGAGAGCTGGCAATGCCTCC +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLEQTA*RAGNAS
Trigger: GGAGGCATTGCCAGCTCTCCAGGCTGTTTGCTCAAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTGCCACTACAAGACCTaGGTCATCCTCTCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFCHYKT*VILSGP
Trigger: TGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCA...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGAAAGATGAGGGGTCATaGGGTTGGGGAGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMKDEGS*GWGGRR
Trigger: CCTCCGTCCTCCCCAACCCCATGACCCCTCATCTTT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CAA 90 bp ATGAGGATGCTCTCCCACTTTCTACTTGACACTCAGCCTACCGTCTaGCTCTGCCACTACAAGACCTGGGTCATCCTCTCTGGGCCAATG +
Preference number: 2 (lower is better)
Translates to: MRMLSHFLLDTQPTV*LCHYKTWVILSGPM
Trigger: CATTGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGAGCATCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCATTCTCTGGGTTCTATaGTGGAGTAGGGAGGCTTCG +
Preference number: 2 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILILWVL*WSREAS
Trigger: CGAAGCCTCCCTACTCCATCATAGAACCCAGAGAAT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGCCTCCTCCTGGGTCTaGCCATCTGCCTCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEASSWV*PSASVG
Trigger: TCCCACAGAGGCAGATGGTCAGACCCAGGAGGAGGC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTTCTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 2 (lower is better)
Translates to: LLSLCPLMSVPSTVIVSVWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...GACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
3UTR-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGCCCCCGCCTCCAGATaGTGCTCAGTAGTTTTAATT +
Preference number: 2 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILAPASR*CSVVLI
Trigger: AATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACTGGAGAGCTGGCAATaGCTCCTCCTGGGTCTGACC +
Preference number: 2 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATLESWQ*LLLGLT
Trigger: GGTCAGACCCAGGAGGAGGCATTGCCAGCTCTCCAG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCACTCTGTGGAATGCCTaGAGAGGCATGGTAGGGAAC +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFTLWNA*RGMVGN
Trigger: GTTCCCTACCATGCCTCTGCAGGCATTCCACAGAGT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHELGHPL*ANVLIH
Trigger: ATGAATGAGAACATTGGCCCAGAGAGGATGACCCAG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGTGACGTTTCCTTACTaGTCACTGCTCCCGTGCTGT +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFVTFPY*SLLPCC
Trigger: ACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCAC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTCCCACTTTCTACTTaGCACTCAGCCTACCGTCTT +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLPLST*HSAYRL
Trigger: AAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCCTCTCCCTGCAACTaGGCAGTTGTCCCCTACAAG +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPSPCN*AVVPYK
Trigger: CTTGTAGGGGACAACTGCTCAGTTGCAGGGAGAGGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGATGCTCCTGCCACTCTaGCCAACCAACGAAGTTAGC +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMMLLPL*PTNEVS
Trigger: GCTAACTTCGTTGGTTGGGCAGAGTGGCAGGAGCAT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGGATCTGCTCTGGGATaGCCTGAACTCCATTCACAT +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFGSALG*PELHSH
Trigger: ATGTGAATGGAGTTCAGGGCATCCCAGAGCAGATCC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMDEARS*IIPSPW
Trigger: CCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCAGTCTAGAGCTGGGTaGCAAGCTCCGGCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRQSRAG*QAPAAR
Trigger: TCTTGCTGCCGGAGCTTGGCACCCAGCTCTAGACTG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGCTAATCTGGGGACGTaGGTTCCTTCAAGCTCTTTG +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFANLGT*VPSSSL
Trigger: CAAAGAGCTTGAAGGAACCCACGTCCCCAGATTAGC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTAGGGTTGCTAATCTaGGGACGTGGGTTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLGLLI*GRGFLQ
Trigger: TTGAAGGAACCCACGTCCCCAGATTAGCAACCCTAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCAGGAAGGATCCTGTaGAGACACATCTGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPGRIL*RHIWLS
Trigger: CGAGAGCCAGATGTGTCTTCACAGGATCCTTCCTGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGATACTGAGGGGAAATaGCCGAAGGGACATTCTCTG +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMDTEGK*PKGHSL
Trigger: CAGAGAATGTCCCTTCGGTCATTTCCCCTCAGTATC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAAGGGCTGCCTGCCTGTaGGGGACCTCTTATTTTGTG +
Preference number: 2 (lower is better)
Translates to: MLMSHARHVCVNHGHALGRAACL*GTSYFV
Trigger: CACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCT...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCCCTCTCCCTGCAACTaGGCAGTTGTCCCCTACAAG +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFPSPCN*AVVPYK
Trigger: CTTGTAGGGGACAACTGCTCAGTTGCAGGGAGAGGG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 2 (lower is better)
Translates to: CPLMSVPSTVIVSVICHIWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...AATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
3UTR-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLGHPL*ANVLIH
Trigger: ATGAATGAGAACATTGGCCCAGAGAGGATGACCCAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGAGGGGTCATGGGGTTaGGGAGGACGGAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQEGSWG*GGRRHP
Trigger: AGGATGCCTCCGTCCTCCCCAACCCCATGACCCCTC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCCAGGAAGGATCCTGTaGAGACACATCTGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFPGRIL*RHIWLS
Trigger: CGAGAGCCAGATGTGTCTTCACAGGATCCTTCCTGG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGCTTCGTGGAGGAGATaGGGCTCGGTCTTGCATTAT +
Preference number: 2 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATASWRR*GSVLHY
Trigger: ATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAGGGCTGCCTGCCTGTaGGGGACCTCTTATTTTGTG +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFRAACL*GTSYFV
Trigger: CACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTGTGAACCCATCTCCTaGCTCTGTGGAATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRCEPIS*LCGMPA
Trigger: TGCAGGCATTCCACAGAGTCAGGAGATGGGTTCACA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCAAATACGGTTCCCTTaGGGAAAAACAGATGTGAAT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEQIRFP*GKTDVN
Trigger: ATTCACATCTGTTTTTCCTCAAGGGAACCGTATTTG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCTACCTAGTTATGTATaGTCAGGAGATCTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHELPSYV*SGDLPK
Trigger: CTTTGGAAGATCTCCTGATCATACATAACTAGGTAG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGAGAGCATCTTCATTTaGATGAGAGCTTCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEESIFI*MRASVS
Trigger: AGAAACTGAAGCTCTCATTCAAATGAAGATGCTCTC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATDEARS*IIPSPW
Trigger: CCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCTGGAGAGCTGGCAATaGCTCCTCCTGGGTCTGACC +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQLESWQ*LLLGLT
Trigger: GGTCAGACCCAGGAGGAGGCATTGCCAGCTCTCCAG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTTTCCTTACTGGTCACTaGTCCCGTGCTGTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFFLTGH*SRAVRP
Trigger: AGGCCTCACAGCACGGGAGCAGTGACCAGTAAGGAA...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGTGATCTCAGCTTACTaGAACCTCTGCCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFVISAY*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGACTACTCCTGGTCCCTaGAGCCACTCCCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQTTPGP*SHSPGR
Trigger: CCTTCCTGGGGAGTGGCTCCAGGGACCAGGAGTAGT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTATTCCCCTAGAAAATaGAAAGCTGGGCAGGAACAT +
Preference number: 2 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILYSPRK*KAGQEH
Trigger: ATGTTCCTGCCCAGCTTTCCATTTTCTAGGGGAATA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGACCATCTGCCTCTGTaGGATGTAGGAACTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRDHLPL*DVGTQP
Trigger: AGGCTGAGTTCCTACATCCCACAGAGGCAGATGGTC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACTTGAGCAAACAGCCTaGAGAGCTGGCAATGCCTCC +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELEQTA*RAGNAS
Trigger: GGAGGCATTGCCAGCTCTCCAGGCTGTTTGCTCAAG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAATGCCACTACAAGACCTaGGTCATCCTCTCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATECHYKT*VILSGP
Trigger: TGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCA...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGTCTGCTTTGCCAGTCTaGCTAGAATCACCTGAGACA +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMSALPV*LESPET
Trigger: TGTCTCAGGTGATTCTAGCCAGACTGGCAAAGCAGA...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGAGGGGTCATGGGGTTaGGGAGGACGGAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSEGSWG*GGRRHP
Trigger: AGGATGCCTCCGTCCTCCCCAACCCCATGACCCCTC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGTTGGGCAGCAAAATCTaGCTATTTCTAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHELGSKI*LFLEML
Trigger: GAGCATTTCTAGAAATAGCCAGATTTTGCTGCCCAA...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CAA 90 bp CTAGTCACCAGTGGAGGGCTGCCTGCCTGTGAGGGACCTCTTATTTaGTGTACAGAATTTATGTTAGACAGGGTCCTGCTTCCTAAAGAG +
Preference number: 2 (lower is better)
Translates to: LVTSGGLPACEGPLI*CTEFMLDRVLLPKE
Trigger: CTCTTTAGGAAGCAGGACCCTGTCTAACATAAATTCTGTACACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCTCCACTGGTGACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGGCCATGCATTGGGATaGAGAAACTTTACTTTGGAA +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFGHALG*RNFTLE
Trigger: TTCCAAAGTAAAGTTTCTTCATCCCAATGCATGGCC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTTCGTGCCCATGCTCCTaGCACTCTGCCCAACCAACG +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSSCPCS*HSAQPT
Trigger: CGTTGGTTGGGCAGAGTGGCAGGAGCATGGGCACGA...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGACCATCTGCCTCTGTaGGATGTAGGAACTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEDHLPL*DVGTQP
Trigger: AGGCTGAGTTCCTACATCCCACAGAGGCAGATGGTC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAATTCTCTGGGTTCTATaGTGGAGTAGGGAGGCTTCG +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEILWVL*WSREAS
Trigger: CGAAGCCTCCCTACTCCATCATAGAACCCAGAGAAT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGATACTGAGGGGAAATaGCCGAAGGGACATTCTCTG +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFDTEGK*PKGHSL
Trigger: CAGAGAATGTCCCTTCGGTCATTTCCCCTCAGTATC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILSTSEL*GGLSKK
Trigger: TTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACTCCCACTTTCTACTTaGCACTCAGCCTACCGTCTT +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELPLST*HSAYRL
Trigger: AAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCACATCTGGCTCTCGTaGCCATGCTCCTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSHIWLS*PCSCHS
Trigger: AGAGTGGCAGGAGCATGGGCACGAGAGCCAGATGTG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCCTACCGTCTTGCTCTaGCACTACAAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQPTVLL*HYKTWV
Trigger: GACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGGGATTACAGACACGTaGTACCATGCCCGCCTAATT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFGITDT*YHARLI
Trigger: AATTAGGCGGGCATGGTAGCACGTGTCTGTAATCCC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAGCATGGATCTGCTCTaGGATGCCCTGAACTCCATT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFSMDLL*DALNSI
Trigger: AATGGAGTTCAGGGCATCCCAGAGCAGATCCATGCT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTAACAGCCTGGAGAGCTaGCAATGCCTCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSNSLES*QCLLLG
Trigger: ACCCAGGAGGAGGCATTGCCAGCTCTCCAGGCTGTT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTAAAGATGAGGGGTCATaGGGTTGGGGAGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSKDEGS*GWGGRR
Trigger: CCTCCGTCCTCCCCAACCCCATGACCCCTCATCTTT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACAGCTCTGCCCATCATCTaGGGTAACACAAATGGCTCA +
Preference number: 2 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTALPII*GNTNGS
Trigger: TGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGC...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGCAAATACGGTTCCCTTaGGGAAAAACAGATGTGAAT +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMQIRFP*GKTDVN
Trigger: ATTCACATCTGTTTTTCCTCAAGGGAACCGTATTTG...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGCTTCAGTTTCTGCTTaGGCCTCAAGCCCTATTTCT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFASVSA*ASSPIS
Trigger: AGAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGGAACTCAGCCTAAGTaGGATGACACCAATGATGAT +
Preference number: 2 (lower is better)
Translates to: MLMSHARHVCVNHGHALGGTQPK*DDTNDD
Trigger: ATCATCATTGGTGTCATCGCACTTAGGCTGAGTTCC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCCTACCGTCTTGCTCTaGCACTACAAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSPTVLL*HYKTWV
Trigger: GACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAATCTGCTTTGCCAGTCTaGCTAGAATCACCTGAGACA +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATESALPV*LESPET
Trigger: TGTCTCAGGTGATTCTAGCCAGACTGGCAAAGCAGA...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGCTTCGTGGAGGAGATaGGGCTCGGTCTTGCATTAT +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSASWRR*GSVLHY
Trigger: ATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGGCCATGCATTGGGATaGAGAAACTTTACTTTGGAA +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRGHALG*RNFTLE
Trigger: TTCCAAAGTAAAGTTTCTTCATCCCAATGCATGGCC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR TCA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTGTGGTCTCAGGTAGTTaGATTTACATGGTAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVVVSGS*IYMVAG
Trigger: GCCAGCTACCATGTAAATTCAACTACCTGAGACCAC...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCCCGCCTCCAGATGCTaGTCAGTAGTTTTAATTTCT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFPASRC*SVVLIS
Trigger: AGAAATTAAAACTACTGAGCAGCATCTGGAGGCGGG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGCCCCCGCCTCCAGATaGTGCTCAGTAGTTTTAATT +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQAPASR*CSVVLI
Trigger: AATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGGAACTCAGCCTAAGTaGGATGACACCAATGATGAT +
Preference number: 2 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEGTQPK*DDTNDD
Trigger: ATCATCATTGGTGTCATCGCACTTAGGCTGAGTTCC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAAACAGTACCATCGGTaGTATAAAAACAGACAATCA +
Preference number: 2 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFKQYHR*YKNRQS
Trigger: TGATTGTCTGTTTTTATAGCACCGATGGTACTGTTT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGAGCATGGATCTGCTCTaGGATGCCCTGAACTCCATT +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQSMDLL*DALNSI
Trigger: AATGGAGTTCAGGGCATCCCAGAGCAGATCCATGCT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACATATTCCCCTAGAAAATaGAAAGCTGGGCAGGAACAT +
Preference number: 2 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATYSPRK*KAGQEH
Trigger: ATGTTCCTGCCCAGCTTTCCATTTTCTAGGGGAATA...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGTTCCATAAGCCTGTTTaGCTCATGGACATATTTTAC +
Preference number: 2 (lower is better)
Translates to: SPISERCSSHTRLQSAVMFHKPV*LMDIFY
Trigger: GTAAAATATGTCCATGAGCCAAACAGGCTTATGGAA...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTCTCCAAGTACAAAAATaGAAGCTGCCAGTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSLQVQK*KLPVLP
Trigger: TGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAG...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR TCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGAATCACCTGAGACATaGGGATGCTCTCCCACTTTC +
Preference number: 2 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSESPET*GCSPTF
Trigger: GAAAGTGGGAGAGCATCCTCATGTCTCAGGTGATTC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGGAGACGGAATCCAATaGCTTGCCATTAATTTAACT +
Preference number: 2 (lower is better)
Translates to: MLMSHARHVCVNHGHALGGDGIQ*LAINLT
Trigger: AGTTAAATTAATGGCAAGGCATTGGATTCCGTCTCC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTGGAAGCTGCCAGTTTTaGCACATTCTAGTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSGSCQF*HILVLY
Trigger: ATACAAAACTAGAATGTGGCAAAACTGGCAGCTTCC...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR GCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGTGCTGGGTTCTCTTCTaGATGGCTTCTCCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQCWVLF*MASPLV
Trigger: AACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCA...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGATCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: MLMSHARHVCVNHGHALGSTSEL*GGLSKK
Trigger: TTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGA...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCAGATTACTTATCGCTaGCATGAAGTCCATAAAATG +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRQITYR*HEVHKM
Trigger: CATTTTATGGACTTCATGGCAGCGATAAGTAATCTG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACATTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 2 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR GCA 90 bp TCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAATTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 2 (lower is better)
Translates to: SHVGAVDGNSKCHLSHLKFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...TTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR GCA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACAAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 2 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGACTAATATTAAGCTTTaGCTAAGCCTAGGAATGCCT +
Preference number: 2 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRTNIKL*LSLGMP
Trigger: AGGCATTCCTAGGCTTAGCCAAAGCTTAATATTAGT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp TCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: SHVGAVDGNSKCHLSHLKVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...TTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
3UTR-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGCTAATGCTACTAACTaGGCAGAGATTGGAATAATA +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFANATN*AEIGII
Trigger: TATTATTCCAATCTCTGCTCAGTTAGTAGCATTAGC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR GCA 90 bp TGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTAAATGCATTTCCTATTaGTTTGAAAGCATCTGTTGC +
Preference number: 2 (lower is better)
Translates to: CPLMSVPSTVIVSVICHIKCISY*FESICC
Trigger: GCAACAGATGCTTTCAAAGCAATAGGAAATGCATTT...AATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTACTAATATTAAGCTTTaGCTAAGCCTAGGAATGCCT +
Preference number: 2 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFTNIKL*LSLGMP
Trigger: AGGCATTCCTAGGCTTAGCCAAAGCTTAATATTAGT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGCTCCAAGTACAAAAATaGAAGCTGCCAGTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQLQVQK*KLPVLP
Trigger: TGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAG...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGGAGACGGAATCCAATaGCTTGCCATTAATTTAACT +
Preference number: 2 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQGDGIQ*LAINLT
Trigger: AGTTAAATTAATGGCAAGGCATTGGATTCCGTCTCC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGAATTTACATGGTAGCTaGCTTCCCTCCAAGTACAAA +
Preference number: 2 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQNLHGS*LPSKYK
Trigger: TTTGTACTTGGAGGGAAGCCAGCTACCATGTAAATT...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR GCA 72 bp GTAGGGAGGCTTCGTGGAGGAGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGGCCCCCGCCTCCAGAT +
Preference number: 3 (lower is better)
Translates to: VGRLRGGDEARS*IIPSPWPPPPD
Trigger: ATCTGGAGGCGGGGGCCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGCCTCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp CAGGAAGGCCCAGAACCACACAGCCCAGGCAGTGACTaGATTCTTCCTAGTCACCAGTGGAGGGCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: QEGPEPHSPGSD*ILPSHQWRAAC
Trigger: GCAGGCAGCCCTCCACTGGTGACTAGGAAGAATTCAGTCACTGCCTGGGCTGTGTGGTTCTGGGCCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CCA 72 bp GCAATGCCTCCTCCTGGGTCTGACCATCTGCCTCTGTaGGATGTAGGAACTCAGCCTAAGTGCGATGACACC +
Preference number: 3 (lower is better)
Translates to: AMPPPGSDHLPL*DVGTQPKCDDT
Trigger: GGTGTCATCGCACTTAGGCTGAGTTCCTACATCCCACAGAGGCAGATGGTCAGACCCAGGAGGAGGCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CCA 72 bp GCTTGTATGGTGTGGCCAGCTGTAACAGAAAGCCACTaGAACGGCACAGTGCCTCCTCACAAAGCCCATCCT +
Preference number: 3 (lower is better)
Translates to: ACMVWPAVTESH*NGTVPPHKAHP
Trigger: AGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCTTTCTGTTACAGCTGGCCACACCATACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 72 bp CACTTTCTACTTGACACTCAGCCTACCGTCTTGCTCTaGCACTACAAGACCTGGGTCATCCTCTCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: HFLLDTQPTVLL*HYKTWVILSGP
Trigger: TGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAGTAGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCCTCTATCTCTAGGCTaGAGCAAACAGCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFPLSLG*SKQPGE
Trigger: CTCTCCAGGCTGTTTGCTCAAGCCTAGAGATAGAGG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp AGCTTCAGTTTCTGCTTGAGCCTCAAGCCCTATTTCTaGGCGCTGCTCCTCTCACACACGTCTCCAATCTGC +
Preference number: 3 (lower is better)
Translates to: SFSFCLSLKPYF*ALLLSHTSPIC
Trigger: GCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 72 bp GTGATTTCAGCTCACTGTAACCTCCACCTTGCAAGTTaGAGCGATTCTCATGCCTCAGCCTCCCGAGTAGCT +
Preference number: 3 (lower is better)
Translates to: VISAHCNLHLAS*SDSHASASRVA
Trigger: AGCTACTCGGGAGGCTGAGGCATGAGAATCGCTGCAACTTGCAAGGTGGAGGTTACAGTGAGCTGAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 72 bp CTGAGCAGGACTTGGTGGGGCAGCACATTTCTGCTCTaGCCATCATCTGGGGTAACACAAATGGCTCAACTT +
Preference number: 3 (lower is better)
Translates to: LSRTWWGSTFLL*PSSGVTQMAQL
Trigger: AAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAGAAATGTGCTGCCCCACCAAGTCCTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR TCA 72 bp CACCTGAGACATGAGGATGCTCTCCCACTTTCTACTTaGCACTCAGCCTACCGTCTTGCTCTGCCACTACAA +
Preference number: 3 (lower is better)
Translates to: HLRHEDALPLST*HSAYRLALPLQ
Trigger: TTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGAGCATCCTCATGTCTCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp ATCAAGGAAGCTTACACATTTCCCGGCCTGAGCAGATaGACTCTAGGGTTGCTAATCTGGGGACGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: IKEAYTFPGLSR*TLGLLIWGRGF
Trigger: GAACCCACGTCCCCAGATTAGCAACCCTAGAGTTCATCTGCTCAGGCCGGGAAATGTGTAAGCTTCCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp CACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATaGGGAAAAAGAATGACACATAGCTTGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: HSASSQSPSWVS*GKRMTHSLARL
Trigger: CAGCCTGGCCAAGCTATGTGTCATTCTTTTTCCTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp GAAGTGCAAGCTCCTGTGAGGAGCAGTGCATGCAGATaGTGTACTTGCTTGTATGGTGTGGCCAGCTGTAAC +
Preference number: 3 (lower is better)
Translates to: EVQAPVRSSACR*CTCLYGVASCN
Trigger: GTTACAGCTGGCCACACCATACAAGCAAGTACATCATCTGCATGCACTGCTCCTCACAGGAGCTTGCACTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 72 bp TCTTTACCTGTGAACCCATCTCCTGACTCTGTGGAATaGCTGCAGAGGCATGGTAGGGAACAACCGTTCAGA +
Preference number: 3 (lower is better)
Translates to: SLPVNPSPDSVE*LQRHGREQPFR
Trigger: TCTGAACGGTTGTTCCCTACCATGCCTCTGCAGGCATTCCACAGAGTCAGGAGATGGGTTCACAGGTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAGAGAGCATCTTCATTaGAATGAGAGCTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEREHLH*NESFSF
Trigger: GAAACTGAAGCTCTCATTCAAATGAAGATGCTCTCT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp GCCGATCGTGCGGTAGAGAGAGCATCTTCATTTGAATaGGAGCTTCAGTTTCTGCTTGAGCCTCAAGCCCTA +
Preference number: 3 (lower is better)
Translates to: ADRAVERASSFE*ELQFLLEPQAL
Trigger: TAGGGCTTGAGGCTCAAGCAGAAACTGAAGCTCTCATTCAAATGAAGATGCTCTCTCTACCGCACGATCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGATCTCCCACTTTCTACTaGACACTCAGCCTACCGTCT +
Preference number: 3 (lower is better)
Translates to: MLMSHARHVCVNHGHALGSPTFY*TLSLPS
Trigger: AGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGA...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGCAAATACGGTTCCCTaGAGGAAAAACAGATGTGAA +
Preference number: 3 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFANTVP*RKNRCE
Trigger: TTCACATCTGTTTTTCCTCAAGGGAACCGTATTTGC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACATTGGGTCCTCAGTTCTaGCTGTCAGCTTGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTLGPQF*LSAWLL
Trigger: CAGCAACCAAGCTGACAGCAAGAACTGAGGACCCAA...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR GCA 72 bp TTGCATTATACCTTCGCCCTGGCCCCCGCCTCCAGATaGTGCTCAGTAGTTTTAATTTCTGGACTCTCTAAA +
Preference number: 3 (lower is better)
Translates to: LHYTFALAPASR*CSVVLISGLSK
Trigger: TTTAGAGAGTCCAGAAATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAATGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR GCA 72 bp AGTTCTTGCTGTCAGCTTGGTTGCTGGGTTCTCTTCTaGATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCA +
Preference number: 3 (lower is better)
Translates to: SSCCQLGCWVLF*MASPLVSVVVS
Trigger: TGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTGACAGCAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR CCA 72 bp CTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCATAGAACCAGGGATAAT +
Preference number: 3 (lower is better)
Translates to: LALPLQDLGHPL*ANVLIHRTRDN
Trigger: ATTATCCCTGGTTCTATGAATGAGAACATTGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CCA 72 bp ATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTaGTGGGGCAGCACATTTCTGCTCTGCCCATCATCT +
Preference number: 3 (lower is better)
Translates to: IICSQFCRLSRT*WGSTFLLCPSS
Trigger: AGATGATGGGCAGAGCAGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR CAA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGGGAAAGGTTCTGCTTaGCCAGTCTGGCTAGAATCA +
Preference number: 3 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFGKGSA*PVWLES
Trigger: TGATTCTAGCCAGACTGGCAAAGCAGAACCTTTCCC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp AGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 3 (lower is better)
Translates to: SLCPLMSVPSTVIVSVICSLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...ACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR CAA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCCTCTATCTCTAGGCTaGAGCAAACAGCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQPLSLG*SKQPGE
Trigger: CTCTCCAGGCTGTTTGCTCAAGCCTAGAGATAGAGG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp AAGTGCGATGACACCAATGATGATACTGAGGGGAAATaGCCGAAGGGACATTCTCTGGGTTCTATGATGGAG +
Preference number: 3 (lower is better)
Translates to: KCDDTNDDTEGK*PKGHSLGSMME
Trigger: CTCCATCATAGAACCCAGAGAATGTCCCTTCGGTCATTTCCCCTCAGTATCATCATTGGTGTCATCGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp GTATTTTCGAACAATTTCCAACAGAAAGCACAGCAGTaGCGTTTCCTTACTGGTCACTGCTCCCGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: VFSNNFQQKAQQ*RFLTGHCSRAV
Trigger: CACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCACTGCTGTGCTTTCTGTTGGAAATTGTTCGAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGCAAATACGGTTCCCTaGAGGAAAAACAGATGTGAA +
Preference number: 3 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRANTVP*RKNRCE
Trigger: TTCACATCTGTTTTTCCTCAAGGGAACCGTATTTGC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp CCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTCCGTATTCATCATAGC +
Preference number: 3 (lower is better)
Translates to: PCNNYKVWLEGQ*KSPVHLRIHHS
Trigger: GCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
3UTR TCA 72 bp GCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTTaGATTTACATGGTAGCTGGCTTCCCTCCAAGTACA +
Preference number: 3 (lower is better)
Translates to: ASPLVSVVVSGS*IYMVAGFPPST
Trigger: TGTACTTGGAGGGAAGCCAGCTACCATGTAAATTCAACTACCTGAGACCACTACACTAACCAAAGGAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR CAA 90 bp GATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 3 (lower is better)
Translates to: DVSFKIPVIIIRSGSRGSSLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...ACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR CAA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGTGCATGGCTTCTCCTTaGGTTAGTGTAGTGGTCTCA +
Preference number: 3 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQCMASP*VSVVVS
Trigger: TGAGACCACTACACTAACCAAAGGAGAAGCCATGCA...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR CAA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACACACAAATGGCTCAACTaGAATTATGTGTTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTHKWLN*NYVFGS
Trigger: GGACCCAAACACATAATTCAAGTTGAGCCATTTGTG...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR CAA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCTCAAATTAGGCAGTTaGCTAATGCTACTAACTGAG +
Preference number: 3 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFLKLGS*LMLLTE
Trigger: CTCAGTTAGTAGCATTAGCAAACTGCCTAATTTGAG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACTCAAATTAGGCAGTTaGCTAATGCTACTAACTGAG +
Preference number: 3 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELKLGS*LMLLTE
Trigger: CTCAGTTAGTAGCATTAGCAAACTGCCTAATTTGAG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAGAGAGCATCTTCATTaGAATGAGAGCTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFREHLH*NESFSF
Trigger: GAAACTGAAGCTCTCATTCAAATGAAGATGCTCTCT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR-3UTR CAA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACAGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR-3UTR CAA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTTGGAAGCTGCCAGTTTaGCCACATTCTAGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVWKLPV*PHSSFV
Trigger: TACAAAACTAGAATGTGGCAAAACTGGCAGCTTCCA...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
3UTR-3UTR CAA 90 bp CAGCTCTTCTGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: QLFWSDVSFKIPVIIIRSAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...AGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCAGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
3UTR TCA 72 bp CATAGAACCAGGGATAATACATCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAAATATGTGTGAGAGCC +
Preference number: 3 (lower is better)
Translates to: HRTRDNTSTSEL*GGLSKKICVRA
Trigger: GGCTCTCACACATATTTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGATGTATTATCCCTGGTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp GATAAATCCTTCAACCAAAAGCAAATACGGTTCCCTTaGGGAAAAACAGATGTGAATGTTGTGGTCTATTGG +
Preference number: 3 (lower is better)
Translates to: DKSFNQKQIRFP*GKTDVNVVVYW
Trigger: CCAATAGACCACAACATTCACATCTGTTTTTCCTCAAGGGAACCGTATTTGCTTTTGGTTGAAGGATTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR TCA 72 bp CAGTACCATCGGTGCTATAAAAACAGACAATCAGCGTaGCATTTAATGGAGTTAGTTATTATTGCTTCTATT +
Preference number: 3 (lower is better)
Translates to: QYHRCYKNRQSA*HLMELVIIASI
Trigger: AATAGAAGCAATAATAACTAACTCCATTAAATGTCACGCTGATTGTCTGTTTTTATAGCACCGATGGTACTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGCCGAGCCTCCCCCGTaGCCGAGGCTGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEAEPPP*PRLKEK
Trigger: CTTCTCTTTCAGCCTCGGGCACGGGGGAGGCTCGGC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGCCTCCTCCTGGGTCTaGCCATCTGCCTCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEASSWV*PSASVG
Trigger: TCCCACAGAGGCAGATGGTCAGACCCAGGAGGAGGC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGTCACCAGTGGAGGGCTaGCTGCCTGTGAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHESPVEG*LPVRDL
Trigger: GAGGTCCCTCACAGGCAGGCAGCCCTCCACTGGTGA...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGACTCCTGACCTCAGGTaGTCCACCTGCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHETPDLR*STCHSL
Trigger: GAGGCTGTGGCAGGTGGATCACCTGAGGTCAGGAGT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTCACCAGTGGAGGGCTaGCTGCCTGTGAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILSPVEG*LPVRDL
Trigger: GAGGTCCCTCACAGGCAGGCAGCCCTCCACTGGTGA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGAGGGGTCATGGGGTTaGGGAGGACGGAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILEGSWG*GGRRHP
Trigger: AGGATGCCTCCGTCCTCCCCAACCCCATGACCCCTC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGCCGAGCCTCCCCCGTaGCCGAGGCTGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMAEPPP*PRLKEK
Trigger: CTTCTCTTTCAGCCTCGGGCACGGGGGAGGCTCGGC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTCACCCTGCCGGGTCTaGGTCCACTCATTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILSPCRV*VHSFSD
Trigger: GTCTGAGAATGAGTGGACTCAGACCCGGCAGGGTGA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACCCTCTCCCTGCAACTaGGCAGTTGTCCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPPSPCN*AVVPYK
Trigger: CTTGTAGGGGACAACTGCTCAGTTGCAGGGAGAGGG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCCACATCTGGCTCTCGTaGCCATGCTCCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILHIWLS*PCSCHS
Trigger: AGAGTGGCAGGAGCATGGGCACGAGAGCCAGATGTG...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCCTGACTCTGTGGAATaGCTGCAGAGGCATGGTAGG +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEPDSVE*LQRHGR
Trigger: CCTACCATGCCTCTGCAGGCATTCCACAGAGTCAGG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGACTGGAACGGCACAGTaGCTCCTCACAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHETGTAQ*LLTKPI
Trigger: GATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCACTACTCCTGGTCCCTaGAGCCACTCCCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFTTPGP*SHSPGR
Trigger: CCTTCCTGGGGAGTGGCTCCAGGGACCAGGAGTAGT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACCCGGCCTGAGCAGATaGACTCTAGGGTTGCTAATC +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPPGLSR*TLGLLI
Trigger: GATTAGCAACCCTAGAGTTCATCTGCTCAGGCCGGG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAAGTGCAAGCTCCTGTaGGGAGCAGTGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEKCKLL*GAVHAD
Trigger: ATCTGCATGCACTGCTCCTCACAGGAGCTTGCACTT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGTTGGTGGCCACTGCATaGCATATCAACAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHELVATA*HINSAA
Trigger: GGCTGCACTGTTGATATGTCATGCAGTGGCCACCAA...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGTCGTGCCCATGCTCCTaGCACTCTGCCCAACCAACG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMSCPCS*HSAQPT
Trigger: CGTTGGTTGGGCAGAGTGGCAGGAGCATGGGCACGA...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCAGTCTAGAGCTGGGTaGCAAGCTCCGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFQSRAG*QAPAAR
Trigger: TCTTGCTGCCGGAGCTTGGCACCCAGCTCTAGACTG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGATAGCTTGGCCAGGCTaGTGGAACCCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEIAWPG*WNPCSS
Trigger: ACTGGAACATGGGTTCCAGCAGCCTGGCCAAGCTAT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCACTGGAACGGCACAGTaGCTCCTCACAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILTGTAQ*LLTKPI
Trigger: GATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAACAGCCTGGAGAGCTaGCAATGCCTCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFNSLES*QCLLLG
Trigger: ACCCAGGAGGAGGCATTGCCAGCTCTCCAGGCTGTT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTGCCACTACAAGACCTaGGTCATCCTCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILCHYKT*VILSGP
Trigger: TGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAAAGATGAGGGGTCATaGGGTTGGGGAGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFKDEGS*GWGGRR
Trigger: CCTCCGTCCTCCCCAACCCCATGACCCCTCATCTTT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTCACCCTGCCGGGTCTaGGTCCACTCATTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LSLCPLMSVPSTVIVSVISPCRV*VHSFSD
Trigger: GTCTGAGAATGAGTGGACTCAGACCCGGCAGGGTGA...GATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCCAGGAAGGATCCTGTaGAGACACATCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFPGRIL*RHIWLS
Trigger: CGAGAGCCAGATGTGTCTTCACAGGATCCTTCCTGG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGCTTCGTGGAGGAGATaGGGCTCGGTCTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILASWRR*GSVLHY
Trigger: ATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTGTGAACCCATCTCCTaGCTCTGTGGAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILCEPIS*LCGMPA
Trigger: TGCAGGCATTCCACAGAGTCAGGAGATGGGTTCACA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTCAAGCCCTATTTCTaGGCGCTGCTCCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLKPYF*ALLLSH
Trigger: GTGTGAGAGGAGCAGCGCTCAGAAATAGGGCTTGAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAAAGTGCAAGCTCCTGTaGGGAGCAGTGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPKCKLL*GAVHAD
Trigger: ATCTGCATGCACTGCTCCTCACAGGAGCTTGCACTT...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATTGGTGGCCACTGCATaGCATATCAACAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPLVATA*HINSAA
Trigger: GGCTGCACTGTTGATATGTCATGCAGTGGCCACCAA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGCAAAACCCCAGCCCTaGGTAGGACCATTATCCTCT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPAKPQP*VGPLSS
Trigger: AGAGGATAATGGTCCTACGCAGGGCTGGGGTTTTGC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGGATCTGCTCTGGGATaGCCTGAACTCCATTCACAT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEGSALG*PELHSH
Trigger: ATGTGAATGGAGTTCAGGGCATCCCAGAGCAGATCC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGCCCCCGCCTCCAGATaGTGCTCAGTAGTTTTAATT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEAPASR*CSVVLI
Trigger: AATTAAAACTACTGAGCAGCATCTGGAGGCGGGGGC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILDEARS*IIPSPW
Trigger: CCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACCTATTTCTGAGCGCTaGTCCTCTCACACACGTCTC +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPPISER*SSHTRL
Trigger: GAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCATAGCTTGGCCAGGCTaGTGGAACCCATGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILIAWPG*WNPCSS
Trigger: ACTGGAACATGGGTTCCAGCAGCCTGGCCAAGCTAT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGATTATACCTTCGCCCTaGCCCCCGCCTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMIIPSP*PPPPDA
Trigger: AGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAAT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGACCATCTGCCTCTGTaGGATGTAGGAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPDHLPL*DVGTQP
Trigger: AGGCTGAGTTCCTACATCCCACAGAGGCAGATGGTC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGAGGGGTCATGGGGTTaGGGAGGACGGAGGCATCCT +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGEGSWG*GGRRHP
Trigger: AGGATGCCTCCGTCCTCCCCAACCCCATGACCCCTC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGCCAGGAAGGATCCTGTaGAGACACATCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMPGRIL*RHIWLS
Trigger: CGAGAGCCAGATGTGTCTTCACAGGATCCTTCCTGG...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGAGGGCTGCCTGCCTGTaGGGGACCTCTTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMRAACL*GTSYFV
Trigger: CACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGACTGGAGAGCTGGCAATaGCTCCTCCTGGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGLESWQ*LLLGLT
Trigger: GGTCAGACCCAGGAGGAGGCATTGCCAGCTCTCCAG...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGTTGCAGCGATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMLQRFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATCGCTGCAA...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGGGATTACAGACACGTaGTACCATGCCCGCCTAATT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILGITDT*YHARLI
Trigger: AATTAGGCGGGCATGGTAGCACGTGTCTGTAATCCC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTCAAGAGATTCTTCTaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLKRFF*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCAGAAGAATCTCTTGAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATCACCCAGGCTGGAGTaGAATGATGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPSPRLE*NDVISA
Trigger: AGCTGAGATCACATCATTGCACTCCAGCCTGGGTGA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGACCATCTGCCTCTGTaGGATGTAGGAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFDHLPL*DVGTQP
Trigger: AGGCTGAGTTCCTACATCCCACAGAGGCAGATGGTC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGTCTGCTTTGCCAGTCTaGCTAGAATCACCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHESALPV*LESPET
Trigger: TGTCTCAGGTGATTCTAGCCAGACTGGCAAAGCAGA...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGCTTGGCCAGGCTGCTaGAACCCATGTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRAWPGC*NPCSSG
Trigger: GCCACTGGAACATGGGTTCCAGCAGCCTGGCCAAGC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGGCACCTGCAGGTTCTaGGTTTCTCTAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFGTCRF*VSLEMV
Trigger: CACCATTTCTAGAGAAACTCAGAACCTGCAGGTGCC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACTCTGCGTAGGCCAATaGGTTTGGAAAGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPLCVGQ*VWKVSH
Trigger: GTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGATACTGAGGGGAAATaGCCGAAGGGACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFDTEGK*PKGHSL
Trigger: CAGAGAATGTCCCTTCGGTCATTTCCCCTCAGTATC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTACTCCTGACCTCAGGTaGTCCACCTGCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFTPDLR*STCHSL
Trigger: GAGGCTGTGGCAGGTGGATCACCTGAGGTCAGGAGT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGCTTCAGTTTCTGCTTaGGCCTCAAGCCCTATTTCT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILASVSA*ASSPIS
Trigger: AGAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCCTTTTGTGCCTTCATaGAGTTACAGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFPFVPS*SYSSHR
Trigger: CCTGTGGCTGCTGTAACTGCATGAAGGCACAAAAGG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGGAACTCAGCCTAAGTaGGATGACACCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEGTQPK*DDTNDD
Trigger: ATCATCATTGGTGTCATCGCACTTAGGCTGAGTTCC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACTGGAGAGCTGGCAATaGCTCCTCCTGGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELESWQ*LLLGLT
Trigger: GGTCAGACCCAGGAGGAGGCATTGCCAGCTCTCCAG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTACTACTCCTGGTCCCTaGAGCCACTCCCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFTTPGP*SHSPGR
Trigger: CCTTCCTGGGGAGTGGCTCCAGGGACCAGGAGTAGT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAGAAGGAAGAAAGCATaGATCTGCTCTGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFRRKKA*ICSGMP
Trigger: GGGCATCCCAGAGCAGATCCATGCTTTCTTCCTTCT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGATTATACCTTCGCCCTaGCCCCCGCCTCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRIIPSP*PPPPDA
Trigger: AGCATCTGGAGGCGGGGGCCAGGGCGAAGGTATAAT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCGTCTGTGTAAATCATaGCCATGCATTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHERLCKS*PCIGMK
Trigger: CTTCATCCCAATGCATGGCCATGATTTACACAGACG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGCATCTCCTGACTCTGTaGAATGCCTGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMHLLTL*NACRGM
Trigger: CATGCCTCTGCAGGCATTCCACAGAGTCAGGAGATG...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGAGCCTCCTGAGGAGCTaGGATTACAGACACGTGCTA +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMSLLRS*DYRHVL
Trigger: TAGCACGTGTCTGTAATCCCAGCTCCTCAGGAGGCT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGAACCCATGTTCCAGTaGCATCTGGAGTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILEPMFQ*HLEFTV
Trigger: TACAGTGAACTCCAGATGCCACTGGAACATGGGTTC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGTGTCATCCCTACTCTaGTCACAGAACATTCACATC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEVSSLL*SQNIHI
Trigger: GATGTGAATGTTCTGTGACCAGAGTAGGGATGACAC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAATCACCCTGCCGGGTCTaGGTCCACTCATTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATESPCRV*VHSFSD
Trigger: GTCTGAGAATGAGTGGACTCAGACCCGGCAGGGTGA...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGAGGGCTGCCTGCCTGTaGGGGACCTCTTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRRAACL*GTSYFV
Trigger: CACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACCCTCTCCCTGCAACTaGGCAGTTGTCCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEPSPCN*AVVPYK
Trigger: CTTGTAGGGGACAACTGCTCAGTTGCAGGGAGAGGG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGCCTTTTGTGCCTTCATaGAGTTACAGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ESVSSHVGAVDGNSKCHLPFVPS*SYSSHR
Trigger: CCTGTGGCTGCTGTAACTGCATGAAGGCACAAAAGG...CAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACGCAAAACCCCAGCCCTaGGTAGGACCATTATCCTCT +
Preference number: 4 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHAKPQP*VGPLSS
Trigger: AGAGGATAATGGTCCTACGCAGGGCTGGGGTTTTGC...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGGAACTCAGCCTAAGTaGGATGACACCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILGTQPK*DDTNDD
Trigger: ATCATCATTGGTGTCATCGCACTTAGGCTGAGTTCC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCTACCGTCTTGCTCTaGCACTACAAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPTVLL*HYKTWV
Trigger: GACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGATTGCAGCGATTCTCATaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGLQRFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCATGAGAATCGCTGCAA...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCTGACTCTGTGGAATaGCTGCAGAGGCATGGTAGG +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPDSVE*LQRHGR
Trigger: CCTACCATGCCTCTGCAGGCATTCCACAGAGTCAGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGCACACGTCTCCAATCTaGAGTAATGCTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEHTSPI*SNAQRN
Trigger: GTTTCTTTGAGCATTACTGCAGATTGGAGACGTGTG...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGTGATCTCAGCTTACTaGAACCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATVISAY*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGTATTCCCCTAGAAAATaGAAAGCTGGGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEYSPRK*KAGQEH
Trigger: ATGTTCCTGCCCAGCTTTCCATTTTCTAGGGGAATA...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAAAGATGAGGGGTCATaGGGTTGGGGAGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFKDEGS*GWGGRR
Trigger: CCTCCGTCCTCCCCAACCCCATGACCCCTCATCTTT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGCTAATCTGGGGACGTaGGTTCCTTCAAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMANLGT*VPSSSL
Trigger: CAAAGAGCTTGAAGGAACCCACGTCCCCAGATTAGC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGAGACTGAGCAGGACTTaGTGGGGCAGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVRLSRT*WGSTFL
Trigger: CAGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCT...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp GTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAATCACCCTGCCGGGTCTaGGTCCACTCATTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VSFKIPVIIIRSGSRGSESPCRV*VHSFSD
Trigger: GTCTGAGAATGAGTGGACTCAGACCCGGCAGGGTGA...TTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGATGTGAACCCATCTCCTaGCTCTGTGGAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGCEPIS*LCGMPA
Trigger: TGCAGGCATTCCACAGAGTCAGGAGATGGGTTCACA...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACACACAATTCTGCAGACTaGGCAGGACTTGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTHNSAD*AGLGGA
Trigger: TGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTG...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCTTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAAGTTTCAGCGACTCTaGTTTCTGTTTCAATCGTTC +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEKFQRL*FLFQSF
Trigger: GAACGATTGAAACAGAAAGCAGAGTCGCTGAAACTT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGTCGTGCCCATGCTCCTaGCACTCTGCCCAACCAACG +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQSCPCS*HSAQPT
Trigger: CGTTGGTTGGGCAGAGTGGCAGGAGCATGGGCACGA...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCTCGGGAAAGGTTCTaGTTTGCCAGTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPRERF*FASLAR
Trigger: TCTAGCCAGACTGGCAAAGCAGAACCTTTCCCGAGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGACTCTGTGGAATGCCTaGAGAGGCATGGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRTLWNA*RGMVGN
Trigger: GTTCCCTACCATGCCTCTGCAGGCATTCCACAGAGT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCTCAAGAGATTCTTCTaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRLKRFF*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCAGAAGAATCTCTTGAG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGTGCTGTCAGCTTGGTTaGTGGGTTCTCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVCCQLG*WVLFCM
Trigger: CATGCAGAAGAGAACCCAGCAACCAAGCTGACAGCA...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATATTCCCCTAGAAAATaGAAAGCTGGGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPYSPRK*KAGQEH
Trigger: ATGTTCCTGCCCAGCTTTCCATTTTCTAGGGGAATA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCGTCTGTGTAAATCATaGCCATGCATTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFRLCKS*PCIGMK
Trigger: CTTCATCCCAATGCATGGCCATGATTTACACAGACG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGTGACGTTTCCTTACTaGTCACTGCTCCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGVTFPY*SLLPCC
Trigger: ACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCAC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGCTTGGCCAGGCTGCTaGAACCCATGTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQAWPGC*NPCSSG
Trigger: GCCACTGGAACATGGGTTCCAGCAGCCTGGCCAAGC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGTAACAGAAAGCCACTaGAACGGCACAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRVTESH*NGTVPP
Trigger: AGGAGGCACTGTGCCGTTCCAGTGGCTTTCTGTTAC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACTGTCAGCTTGGTTGCTaGGTTCTCTTCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHCQLGC*VLFCMA
Trigger: AGCCATGCAGAAGAGAACCCAGCAACCAAGCTGACA...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGCTCTGCCCATCATCTaGGGTAACACAAATGGCTCA +
Preference number: 4 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVALPII*GNTNGS
Trigger: TGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGC...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp AGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SDVSFKIPVIIIRSGSRGWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...GCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR TCA 90 bp CTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTATCAGGATTGCTCAGGACTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LFISVFIIAKSLIRIAQDWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...GTCCTGAGCAATCCTGATAAGAGACTTCGCTATGATGAATACGGAGATGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGGCACCTGCAGGTTCTaGGTTTCTCTAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATGTCRF*VSLEMV
Trigger: CACCATTTCTAGAGAAACTCAGAACCTGCAGGTGCC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACCTCTGCGTAGGCCAATaGGTTTGGAAAGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHLCVGQ*VWKVSH
Trigger: GTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAG...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGCTTCGTGGAGGAGATaGGGCTCGGTCTTGCATTAT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEASWRR*GSVLHY
Trigger: ATAATGCAAGACCGAGCCTCATCTCCTCCACGAAGC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGATTCTCTGGGTTCTATaGTGGAGTAGGGAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRILWVL*WSREAS
Trigger: CGAAGCCTCCCTACTCCATCATAGAACCCAGAGAAT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGATACTGAGGGGAAATaGCCGAAGGGACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRDTEGK*PKGHSL
Trigger: CAGAGAATGTCCCTTCGGTCATTTCCCCTCAGTATC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGACTCCCACTTTCTACTTaGCACTCAGCCTACCGTCTT +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGLPLST*HSAYRL
Trigger: AAGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAG...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGAATCACCTGAGACATaGGGATGCTCTCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGESPET*GCSPTF
Trigger: GAAAGTGGGAGAGCATCCTCATGTCTCAGGTGATTC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGAGGAAAAACAGATGTaGATGTTGTGGTCTATTGGC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFEEKQM*MLWSIG
Trigger: GCCAATAGACCACAACATTCACATCTGTTTTTCCTC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCCTACCTAGTTATGTATaGTCAGGAGATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILLPSYV*SGDLPK
Trigger: CTTTGGAAGATCTCCTGATCATACATAACTAGGTAG...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGAGAGCATCTTCATTTaGATGAGAGCTTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILESIFI*MRASVS
Trigger: AGAAACTGAAGCTCTCATTCAAATGAAGATGCTCTC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGAGCAGTGCATGCAGATaGTGTACTTGCTTGTATGGT +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMSSACR*CTCLYG
Trigger: ACCATACAAGCAAGTACATCATCTGCATGCACTGCT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACGTGGTCTCAGGTAGTTaGATTTACATGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHVVSGS*IYMVAG
Trigger: GCCAGCTACCATGTAAATTCAACTACCTGAGACCAC...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACCTTTTGTGCCTTCATaGAGTTACAGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATPFVPS*SYSSHR
Trigger: CCTGTGGCTGCTGTAACTGCATGAAGGCACAAAAGG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCAAGTTTCAGCGACTCTaGTTTCTGTTTCAATCGTTC +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILKFQRL*FLFQSF
Trigger: GAACGATTGAAACAGAAAGCAGAGTCGCTGAAACTT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGCAAAACCCCAGCCCTaGGTAGGACCATTATCCTCT +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFAKPQP*VGPLSS
Trigger: AGAGGATAATGGTCCTACGCAGGGCTGGGGTTTTGC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCACATCTGGCTCTCGTaGCCATGCTCCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQHIWLS*PCSCHS
Trigger: AGAGTGGCAGGAGCATGGGCACGAGAGCCAGATGTG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGGAGACGGAATCCAATaGCTTGCCATTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPGDGIQ*LAINLT
Trigger: AGTTAAATTAATGGCAAGGCATTGGATTCCGTCTCC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGGAGACGGAATCCAATaGCTTGCCATTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILGDGIQ*LAINLT
Trigger: AGTTAAATTAATGGCAAGGCATTGGATTCCGTCTCC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGATGAGGCTCGGTCTTaGATTATACCTTCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFDEARS*IIPSPW
Trigger: CCAGGGCGAAGGTATAATGCAAGACCGAGCCTCATC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACCTCGGGAAAGGTTCTaGTTTGCCAGTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEPRERF*FASLAR
Trigger: TCTAGCCAGACTGGCAAAGCAGAACCTTTCCCGAGG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACTCCACCTTGCAAGTTaGAGCGATTCTCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATLHLAS*SDSHAS
Trigger: TGAGGCATGAGAATCGCTGCAACTTGCAAGGTGGAG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACCTATTTCTGAGCGCTaGTCCTCTCACACACGTCTC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEPISER*SSHTRL
Trigger: GAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTCACCCAGGCTGGAGTaGAATGATGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRSPRLE*NDVISA
Trigger: AGCTGAGATCACATCATTGCACTCCAGCCTGGGTGA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACATGGGTCCTCAGTTCTTaGTGTCAGCTTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTWVLSS*CQLGCW
Trigger: CCAGCAACCAAGCTGACAGCAAGAACTGAGGACCCA...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGAGAAGGAAGAAAGCATaGATCTGCTCTGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRRRKKA*ICSGMP
Trigger: GGGCATCCCAGAGCAGATCCATGCTTTCTTCCTTCT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGACTAATATTAAGCTTTaGCTAAGCCTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHETNIKL*LSLGMP
Trigger: AGGCATTCCTAGGCTTAGCCAAAGCTTAATATTAGT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACTAGGGTTGCTAATCTaGGGACGTGGGTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATLGLLI*GRGFLQ
Trigger: TTGAAGGAACCCACGTCCCCAGATTAGCAACCCTAG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CAA 72 bp AGTGGAGGGCTGCCTGCCTGTGAGGGACCTCTTATTTaGTGTACAGAATTTATGTTAGACAGGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGGLPACEGPLI*CTEFMLDRVLL
Trigger: AAGCAGGACCCTGTCTAACATAAATTCTGTACACAAAATAAGAGGTCCCTCACAGGCAGGCAGCCCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
3UTR CAA 72 bp TATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTaGGTGGGGCAGCACATTTCTGCTCTGCCCATCATC +
Preference number: 4 (lower is better)
Translates to: YYLLTILQTEQD*VGQHISALPII
Trigger: GATGATGGGCAGAGCAGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp AGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAAAGTTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SFKIPVIIIRSGSRGSESWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...ACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR TCA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTCTCTGCGTAGGCCAATaGGTTTGGAAAGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSLCVGQ*VWKVSH
Trigger: GTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAG...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPSTSEL*GGLSKK
Trigger: TTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGGCCATGCATTGGGATaGAGAAACTTTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMGHALG*RNFTLE
Trigger: TTCCAAAGTAAAGTTTCTTCATCCCAATGCATGGCC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTGGAGTGCAATGATGTaGTCTCAGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRWSAMM*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACATCATTGCACTCCA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACATGGAGTGCAATGATGTaGTCTCAGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATWSAMM*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACATCATTGCACTCCA...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGCACAATTCTGCAGACTaGGCAGGACTTGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQHNSAD*AGLGGA
Trigger: TGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTG...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCCTTCTTTTCCTTTTGTaGCTTCATGCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFLLFLL*LHAVTA
Trigger: TGCTGTAACTGCATGAAGGCACAAAAGGAAAAGAAG...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLCPLMSVPSTVIVSVIFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...GATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp GAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESVSSHVGAVDGNSKCHLFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...CAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp CTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: LSLCPLMSVPSTVIVSVIRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...GATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMVSYQD*SGLQMH
Trigger: ATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGAC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGGATCTGCTCTGGGATaGCCTGAACTCCATTCACAT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEGSALG*PELHSH
Trigger: ATGTGAATGGAGTTCAGGGCATCCCAGAGCAGATCC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACAGATTACTTATCGCTaGCATGAAGTCCATAAAATG +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPQITYR*HEVHKM
Trigger: CATTTTATGGACTTCATGGCAGCGATAAGTAATCTG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGAAACAGTACCATCGGTaGTATAAAAACAGACAATCA +
Preference number: 4 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEKQYHR*YKNRQS
Trigger: TGATTGTCTGTTTTTATAGCACCGATGGTACTGTTT...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCAGTCTAGAGCTGGGTaGCAAGCTCCGGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSQSRAG*QAPAAR
Trigger: TCTTGCTGCCGGAGCTTGGCACCCAGCTCTAGACTG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTaGTGTCAGCTTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVWVLSS*CQLGCW
Trigger: CCAGCAACCAAGCTGACAGCAAGAACTGAGGACCCA...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAGGAGGTGTGTCTTCTaGGTATTTGTTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFRRCVF*VFVSSN
Trigger: GTTAGAAGAAACAAATACCCAGAAGACACACCTCCT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGTTCCTCACTATACGTaGAGTTCCCCTCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQVPHYT*SSPHPA
Trigger: GGCAGGGTGAGGGGAACTCCACGTATAGTGAGGAAC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAGCATGGATCTGCTCTaGGATGCCCTGAACTCCATT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATESMDLL*DALNSI
Trigger: AATGGAGTTCAGGGCATCCCAGAGCAGATCCATGCT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGAATATGAAGGAAGCATaGAGTGTAGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMNMKEA*SVGYSH
Trigger: GTGACTGTAGCCTACACTCCATGCTTCCTTCATATT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCATCATGGCCATGCATTaGGATGAAGAAACTTTACTT +
Preference number: 4 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILIMAMH*DEETLL
Trigger: AAGTAAAGTTTCTTCATCCCAATGCATGGCCATGAT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGCTAATCTGGGGACGTaGGTTCCTTCAAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEANLGT*VPSSSL
Trigger: CAAAGAGCTTGAAGGAACCCACGTCCCCAGATTAGC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCTAGGGTTGCTAATCTaGGGACGTGGGTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFLGLLI*GRGFLQ
Trigger: TTGAAGGAACCCACGTCCCCAGATTAGCAACCCTAG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGAACCCATGTTCCAGTaGCATCTGGAGTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVREPMFQ*HLEFTV
Trigger: TACAGTGAACTCCAGATGCCACTGGAACATGGGTTC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATATATACTTTCTTGGTaGCCACTGCATGACATATCA +
Preference number: 4 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPYILSW*PLHDIS
Trigger: TGATATGTCATGCAGTGGCCACCAAGAAAGTATATA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTATCAGGATTTGGCTCGAGGGGCAGTaGAAGTCACCTGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: ESHLFISVFIIAKSLIRIWLEGQ*KSPVHL
Trigger: GAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCA...AATCCTGATAAGAGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCGCTAATGCTACTAACTaGGCAGAGATTGGAATAATA +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFANATN*AEIGII
Trigger: TATTATTCCAATCTCTGCTCAGTTAGTAGCATTAGC...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAACAGACAATCAGCGTaGCATTTAATGGAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFNRQSA*HLMELV
Trigger: AACTAACTCCATTAAATGTCACGCTGATTGTCTGTT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGGCATCTTCATTTGAATaGGAGCTTCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMASSFE*ELQFLL
Trigger: AAGCAGAAACTGAAGCTCTCATTCAAATGAAGATGC...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCCCGGCCTGAGCAGATaGACTCTAGGGTTGCTAATC +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSPGLSR*TLGLLI
Trigger: GATTAGCAACCCTAGAGTTCATCTGCTCAGGCCGGG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGAGCAGTGCATGCAGATaGTGTACTTGCTTGTATGGT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRSSACR*CTCLYG
Trigger: ACCATACAAGCAAGTACATCATCTGCATGCACTGCT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp AGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTAATTTCTGCATTTCTTaGTCCTTCCGTCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RGSESHLFISVFIIAKSLNFCIS*SFRPAL
Trigger: GAGCGCTGGACGGAAGGATCAAGAAATGCAGAAATT...AAGAGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp GTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAACCTTTTGTGCCTTCATaGAGTTACAGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VSFKIPVIIIRSGSRGSEPFVPS*SYSSHR
Trigger: CCTGTGGCTGCTGTAACTGCATGAAGGCACAAAAGG...TTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp AGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: SLCPLMSVPSTVIVSVICRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...ACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGGCAAAACCCCAGCCCTaGGTAGGACCATTATCCTCT +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQAKPQP*VGPLSS
Trigger: AGAGGATAATGGTCCTACGCAGGGCTGGGGTTTTGC...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGATGCTCCTGCCACTCTaGCCAACCAACGAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQMLLPL*PTNEVS
Trigger: GCTAACTTCGTTGGTTGGGCAGAGTGGCAGGAGCAT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGCCCGCCTCCAGATGCTaGTCAGTAGTTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRPASRC*SVVLIS
Trigger: AGAAATTAAAACTACTGAGCAGCATCTGGAGGCGGG...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTTTCCTTACTGGTCACTaGTCCCGTGCTGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSFLTGH*SRAVRP
Trigger: AGGCCTCACAGCACGGGAGCAGTGACCAGTAAGGAA...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTTTCTTGGTGGCCACTaGATGACATATCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRFLGGH*MTYQQC
Trigger: GCACTGTTGATATGTCATGCAGTGGCCACCAAGAAA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACATGCTGGGTTCTCTTCTaGATGGCTTCTCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTCWVLF*MASPLV
Trigger: AACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCA...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp AGGTCTGGCTCGAGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RSGSRGSESHLFISVFIIVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...TATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELGHPL*ANVLIH
Trigger: ATGAATGAGAACATTGGCCCAGAGAGGATGACCCAG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTTGCCACTACAAGACCTaGGTCATCCTCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSCHYKT*VILSGP
Trigger: TGGCCCAGAGAGGATGACCCAGGTCTTGTAGTGGCA...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGTTGGGCAGCAAAATCTaGCTATTTCTAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMLGSKI*LFLEML
Trigger: GAGCATTTCTAGAAATAGCCAGATTTTGCTGCCCAA...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGTAACAGAAAGCCACTaGAACGGCACAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQVTESH*NGTVPP
Trigger: AGGAGGCACTGTGCCGTTCCAGTGGCTTTCTGTTAC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTATATACTTTCTTGGTaGCCACTGCATGACATATCA +
Preference number: 4 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFYILSW*PLHDIS
Trigger: TGATATGTCATGCAGTGGCCACCAAGAAAGTATATA...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGAGACTGAGCAGGACTTaGTGGGGCAGCACATTTCTG +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQRLSRT*WGSTFL
Trigger: CAGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCT...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGATTCTCTGGGTTCTATaGTGGAGTAGGGAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQILWVL*WSREAS
Trigger: CGAAGCCTCCCTACTCCATCATAGAACCCAGAGAAT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGACAAATGGCTCAACTTaGATTATGTGTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVTNGST*IMCLGP
Trigger: AGGACCCAAACACATAATTCAAGTTGAGCCATTTGT...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp CTTCTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCTTTGTTTCTTCTAACTaGGTCAATGTAAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LLSLCPLMSVPSTVIVSVFVSSN*VNVSFR
Trigger: ACGGAAGCTTACATTGACGCAGTTAGAAGAAACAAA...GACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp TCGAGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: SRGSESHLFISVFIIAKSVSYQD*SGLQMH
Trigger: ATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGAC...AGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRVSYQD*SGLQMH
Trigger: ATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGAC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACAAGTTTCAGCGACTCTaGTTTCTGTTTCAATCGTTC +
Preference number: 4 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHKFQRL*FLFQSF
Trigger: GAACGATTGAAACAGAAAGCAGAGTCGCTGAAACTT...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTATGCTCCTGCCACTCTaGCCAACCAACGAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSMLLPL*PTNEVS
Trigger: GCTAACTTCGTTGGTTGGGCAGAGTGGCAGGAGCAT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCTCCACCTTGCAAGTTaGAGCGATTCTCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQLHLAS*SDSHAS
Trigger: TGAGGCATGAGAATCGCTGCAACTTGCAAGGTGGAG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTACTCTGTGGAATGCCTaGAGAGGCATGGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSTLWNA*RGMVGN
Trigger: GTTCCCTACCATGCCTCTGCAGGCATTCCACAGAGT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAAGACACGTGCTACCATaGCCGCCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATRHVLP*PPNFCI
Trigger: AATACAAAAATTAGGCGGGCATGGTAGCACGTGTCT...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTTTTCTTGGTGGCCACTaGATGACATATCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFFLGGH*MTYQQC
Trigger: GCACTGTTGATATGTCATGCAGTGGCCACCAAGAAA...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGGTCTGGCTCGAGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAAAATGCATTTCCTATTaGTTTGTACCCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSGSRGSESHLFISVFIIKCISY*FVPQAA
Trigger: AGCTGCTTGGGGTACAAAGCAATAGGAAATGCATTT...TATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGAGCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp AGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTAAATGCATTTCCTATTaGTTTGTACCCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLCPLMSVPSTVIVSVICKCISY*FVPQAA
Trigger: AGCTGCTTGGGGTACAAAGCAATAGGAAATGCATTT...ACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGTGCTGTCAGCTTGGTTaGTGGGTTCTCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQCCQLG*WVLFCM
Trigger: CATGCAGAAGAGAACCCAGCAACCAAGCTGACAGCA...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAATAGAACAGACTATATaGGGGATTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGIEQTI*GISSQQ
Trigger: CTGCTGGCTACTAATCCCCCATATAGTCTGTTCTAT...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGATCATGGCCATGCATTaGGATGAAGAAACTTTACTT +
Preference number: 4 (lower is better)
Translates to: SPISERCSSHTRLQSAVMIMAMH*DEETLL
Trigger: AAGTAAAGTTTCTTCATCCCAATGCATGGCCATGAT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGTGACGTTTCCTTACTaGTCACTGCTCCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSVTFPY*SLLPCC
Trigger: ACAGCACGGGAGCAGTGACCAGTAAGGAAACGTCAC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTAGCCTCCTGAGGAGCTaGGATTACAGACACGTGCTA +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSSLLRS*DYRHVL
Trigger: TAGCACGTGTCTGTAATCCCAGCTCCTCAGGAGGCT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGTGTCATCCCTACTCTaGTCACAGAACATTCACATC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEVSSLL*SQNIHI
Trigger: GATGTGAATGTTCTGTGACCAGAGTAGGGATGACAC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGTGTCAGCTTGGTTGCTaGGTTCTCTTCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQCQLGC*VLFCMA
Trigger: AGCCATGCAGAAGAGAACCCAGCAACCAAGCTGACA...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGCTTGAATTATGTGTTTaGGTCCTCAGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVLELCV*VLSSCC
Trigger: ACAGCAAGAACTGAGGACCCAAACACATAATTCAAG...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGGCTCTGCCCATCATCTaGGGTAACACAAATGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQALPII*GNTNGS
Trigger: TGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGC...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACAGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR TCA 90 bp TTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAAGGCACCTGCAGGTTCTaGGTTTCTCTAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: FSDSAFCFNRSSLYNPAKGTCRF*VSLEMV
Trigger: CACCATTTCTAGAGAAACTCAGAACCTGCAGGTGCC...TTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGGCCATGCATTGGGATaGAGAAACTTTACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFGHALG*RNFTLE
Trigger: TTCCAAAGTAAAGTTTCTTCATCCCAATGCATGGCC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACAAATACGGTTCCCTTaGGGAAAAACAGATGTGAAT +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATQIRFP*GKTDVN
Trigger: ATTCACATCTGTTTTTCCTCAAGGGAACCGTATTTG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACACTACCTAGTTATGTATaGTCAGGAGATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATLPSYV*SGDLPK
Trigger: CTTTGGAAGATCTCCTGATCATACATAACTAGGTAG...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAGAGCATCTTCATTTaGATGAGAGCTTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATESIFI*MRASVS
Trigger: AGAAACTGAAGCTCTCATTCAAATGAAGATGCTCTC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTCCATCCTGGGTATCATaGGGAAAAAGAATGACACAT +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFPSWVS*GKRMTH
Trigger: ATGTGTCATTCTTTTTCCTCATGATACCCAGGATGG...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGGTGGTCTCAGGTAGTTaGATTTACATGGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQVVSGS*IYMVAG
Trigger: GCCAGCTACCATGTAAATTCAACTACCTGAGACCAC...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTACAAATGGCTCAACTTaGATTATGTGTTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSTNGST*IMCLGP
Trigger: AGGACCCAAACACATAATTCAAGTTGAGCCATTTGT...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp TGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTCTTCTTTTCCTTTTGTaGCTTCATGCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: CPLMSVPSTVIVSVICHILLFLL*LHAVTA
Trigger: TGCTGTAACTGCATGAAGGCACAAAAGGAAAAGAAG...AATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp CTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCAAATGCATTTCCTATTaGTTTGAAAGCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LSLCPLMSVPSTVIVSVIKCISY*FESICC
Trigger: GCAACAGATGCTTTCAAAGCAATAGGAAATGCATTT...GATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAGACACGTGCTACCATaGCCGCCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATERHVLP*PPNFCI
Trigger: AATACAAAAATTAGGCGGGCATGGTAGCACGTGTCT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TCGAGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTAGGAGGTGTGTCTTCTaGGTATTTGTTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: SRGSESHLFISVFIIAKSRRCVF*VFVSSN
Trigger: GTTAGAAGAAACAAATACCCAGAAGACACACCTCCT...AGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGTCTGCTTTGCCAGTCTaGCTAGAATCACCTGAGACA +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQSALPV*LESPET
Trigger: TGTCTCAGGTGATTCTAGCCAGACTGGCAAAGCAGA...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAATATGAAGGAAGCATaGAGTGTAGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATENMKEA*SVGYSH
Trigger: GTGACTGTAGCCTACACTCCATGCTTCCTTCATATT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAGAGTATATACTTTCTTaGTGGCCACTGCATGACATA +
Preference number: 4 (lower is better)
Translates to: MLMSHARHVCVNHGHALGEYILS*WPLHDI
Trigger: TATGTCATGCAGTGGCCACCAAGAAAGTATATACTC...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CATCATAGCGAAGTCTCTTATCAGGATTGCTCAGGACTGCAAATGCATTTCCTAGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HHSEVSYQDCSGLQMHFLAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...TAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGCTATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR TCA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSATLLSVSIVHLCIILPAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCTCTGCGTAGGCCAATaGGTTTGGAAAGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSLCVGQ*VWKVSH
Trigger: GTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGTCTACTTCAGAGTTGTaGGGAGGTTTAAGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRSTSEL*GGLSKK
Trigger: TTTCTTACTTAAACCTCCTCACAACTCTGAAGTAGA...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTGCATCTTCATTTGAATaGGAGCTTCAGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFASSFE*ELQFLL
Trigger: AAGCAGAAACTGAAGCTCTCATTCAAATGAAGATGC...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp ATCATAGCGAAGTCTCTTATCAGGATTGCTCAGGACTGCAAATGCATTTCCTATAATTTCTGCATTTCTTaGTCCTTCCGTCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: IIAKSLIRIAQDCKCISYNFCIS*SFRPAL
Trigger: GAGCGCTGGACGGAAGGATCAAGAAATGCAGAAATT...ATAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGCTATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp AGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTCTTCTTTTCCTTTTGTaGCTTCATGCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: RGSESHLFISVFIIAKSLLLFLL*LHAVTA
Trigger: TGCTGTAACTGCATGAAGGCACAAAAGGAAAAGAAG...AAGAGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp TCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: SHVGAVDGNSKCHLSHLKRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...TTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACAAAGTTTCAGCGACTCTaGTTTCTGTTTCAATCGTTC +
Preference number: 4 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTKFQRL*FLFQSF
Trigger: GAACGATTGAAACAGAAAGCAGAGTCGCTGAAACTT...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAGTCAGCTCTGACTCCTaGTGTTGTTATTCACAATCC +
Preference number: 4 (lower is better)
Translates to: VSATLLSVSIVHLCIILPVSSDS*CCYSQS
Trigger: GGATTGTGAATAACAACAGCAGGAGTCAGAGCTGAC...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAGGAGGTGTGTCTTCTaGGTATTTGTTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATERRCVF*VFVSSN
Trigger: GTTAGAAGAAACAAATACCCAGAAGACACACCTCCT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACAGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCTGGGTCATCCTCTCTaGGCCAATGTTCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSLGHPL*ANVLIH
Trigger: ATGAATGAGAACATTGGCCCAGAGAGGATGACCCAG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAATTGGGCAGCAAAATCTaGCTATTTCTAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATELGSKI*LFLEML
Trigger: GAGCATTTCTAGAAATAGCCAGATTTTGCTGCCCAA...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACATTCCATAAGCCTGTTTaGCTCATGGACATATTTTAC +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATFHKPV*LMDIFY
Trigger: GTAAAATATGTCCATGAGCCAAACAGGCTTATGGAA...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACACTTGAATTATGTGTTTaGGTCCTCAGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTLELCV*VLSSCC
Trigger: ACAGCAAGAACTGAGGACCCAAACACATAATTCAAG...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGGCACCTGCAGGTTCTaGGTTTCTCTAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSGTCRF*VSLEMV
Trigger: CACCATTTCTAGAGAAACTCAGAACCTGCAGGTGCC...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTTTTGTTTCTTCTAACTaGGTCAATGTAAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFFVSSN*VNVSFR
Trigger: ACGGAAGCTTACATTGACGCAGTTAGAAGAAACAAA...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGTTTGAAAGCATCTGTTaGTCCAGGAGCACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQFESIC*SRSTVL
Trigger: AAGAACTGTGCTCCTGGAGCAACAGATGCTTTCAAA...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAAAATGCATTTCCTATTaGTTTGAAAGCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATKCISY*FESICC
Trigger: GCAACAGATGCTTTCAAAGCAATAGGAAATGCATTT...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp AGCGAAGTCTCTTATCAGGATTGCTCAGGACTGCAAATGCATTTCCTATTGCTTAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: SEVSYQDCSGLQMHFLLLRIAQD*KCISYC
Trigger: GCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCT...AAGCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCACACGTCTCCAATCTaGAGTAATGCTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQHTSPI*SNAQRN
Trigger: GTTTCTTTGAGCATTACTGCAGATTGGAGACGTGTG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGCTCAGGACTGCAAATaGATTTCCTATTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: DVSFKIPVIIIRSGSRGSAQDCK*ISYCFV
Trigger: TACAAAGCAATAGGAAATGCATTTGCAGTCCTGAGC...ACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp AAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAAAGTCACCTGGCTCAGGACTGCAAATaGATTTCCTATTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KIPVIIIRSGSRGSESHLAQDCK*ISYCFV
Trigger: TACAAAGCAATAGGAAATGCATTTGCAGTCCTGAGC...CAGGTGACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTGGAAGCTGCCAGTTTTaGCACATTCTAGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVGSCQF*HILVLY
Trigger: ATACAAAACTAGAATGTGGCAAAACTGGCAGCTTCC...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp AGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAAAGTGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SFKIPVIIIRSGSRGSESVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...ACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGATAGAACAGACTATATaGGGGATTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQIEQTI*GISSQQ
Trigger: CTGCTGGCTACTAATCCCCCATATAGTCTGTTCTAT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAACTAATATTAAGCTTTaGCTAAGCCTAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATETNIKL*LSLGMP
Trigger: AGGCATTCCTAGGCTTAGCCAAAGCTTAATATTAGT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTTTCCATAAGCCTGTTTaGCTCATGGACATATTTTAC +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFFHKPV*LMDIFY
Trigger: GTAAAATATGTCCATGAGCCAAACAGGCTTATGGAA...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTAATTTACATGGTAGCTaGCTTCCCTCCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVNLHGS*LPSKYK
Trigger: TTTGTACTTGGAGGGAAGCCAGCTACCATGTAAATT...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR TCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGAATTTCTGCATTTCTTaGTCCTTTGTACCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQNFCIS*SFVPQA
Trigger: TGCTTGGGGTACAAAGGATCAAGAAATGCAGAAATT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCCATCCTGGGTATCATaGGGAAAAAGAATGACACAT +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSPSWVS*GKRMTH
Trigger: ATGTGTCATTCTTTTTCCTCATGATACCCAGGATGG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGCTTCTTTTCCTTTTGTaGCTTCATGCAGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQLLFLL*LHAVTA
Trigger: TGCTGTAACTGCATGAAGGCACAAAAGGAAAAGAAG...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAAATGCATTTCCTATTaGTTTGAAAGCATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEKCISY*FESICC
Trigger: GCAACAGATGCTTTCAAAGCAATAGGAAATGCATTT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp GGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACATATGAAGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: GAVDGNSKCHLSHLKTYEVSYQD*SGLQMH
Trigger: ATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGAC...TTCATATGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp GGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCTTTTTAAACAGTACCATCGGTaGTATAAAAACAGACAATCA +
Preference number: 4 (lower is better)
Translates to: GCWNPCSSGIWSSLYFLFKQYHR*YKNRQS
Trigger: TGATTGTCTGTTTTTATAGCACCGATGGTACTGTTT...AAAAAGAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR GCA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGGGAAGCTGCCAGTTTTaGCACATTCTAGTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQGSCQF*HILVLY
Trigger: ATACAAAACTAGAATGTGGCAAAACTGGCAGCTTCC...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR GCA 90 bp CTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCTCTGAAGCAAGGACTGTaGCAGAACCTTTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLSVSIVHLCIILPNLSALKQGL*QNLCCF
Trigger: GAAACAACAAAGGTTCTGGCACAGTCCTTGCTTCAG...AGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCAGAATATGTAGTCTaGGGTTTCTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSAEYVV*GFSSSS
Trigger: GGAGGAAGAAGAGAAACCTCAGACTACATATTCTGC...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGAACAGACAATCAGCGTaGCATTTAATGGAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQNRQSA*HLMELV
Trigger: AACTAACTCCATTAAATGTCACGCTGATTGTCTGTT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR TCA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAATTGTTTTCTACTCCTaGGAATCCTCTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: VSATLLSVSIVHLCIILPIVFYS*ESSLQK
Trigger: CTTTTGAAGAGAGGATTCTCAGGAGTAGAAAACAAT...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp CTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCTCAAATTTGTCAGCTCTaGCTCCTGCTGTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: LLSVSIVHLCIILPNLSAQICQL*LLLLLF
Trigger: GAATAACAACAGCAGGAGTCAGAGCTGACAAATTTG...AGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR GCA 90 bp TGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGTTTGTTTCTTCTAACTaGGTCAATGTAAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: WSDVSFKIPVIIIRSGSRFVSSN*VNVSFR
Trigger: ACGGAAGCTTACATTGACGCAGTTAGAAGAAACAAA...CCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR GCA 90 bp CAGCTCTTCTGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: QLFWSDVSFKIPVIIIRSVSYQD*SGLQMH
Trigger: ATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGAC...AGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCAGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR GCA 90 bp TTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAAAAGTTTCAGCGACTCTaGTTTCTGTTTCAATCGTTC +
Preference number: 4 (lower is better)
Translates to: FSDSAFCFNRSSLYNPAKKFQRL*FLFQSF
Trigger: GAACGATTGAAACAGAAAGCAGAGTCGCTGAAACTT...TTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR GCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCACTGAAGCAAGGACTGTaGCAGAACCTTTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSLKQGL*QNLCCF
Trigger: GAAACAACAAAGGTTCTGGCACAGTCCTTGCTTCAG...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CCA 90 bp CAGCTCTTCTGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGTTGAACAGCTCTTCTaGAGTGATGTCAGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QLFWSDVSFKIPVIIIRSVEQLF*SDVSFK
Trigger: TTTGAAGCTGACATCACTCCAGAAGAGCTGTTCAAC...AGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCAGAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CCA 90 bp CTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCTATAGAACAGACTATATaGGGGATTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSVSIVHLCIILPNLSAIEQTI*GISSQQ
Trigger: CTGCTGGCTACTAATCCCCCATATAGTCTGTTCTAT...AGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCACAAATTTGTCAGCTCTaGCTCCTGCTGTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSQICQL*LLLLLF
Trigger: GAATAACAACAGCAGGAGTCAGAGCTGACAAATTTG...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR GCA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCAGATTACTTATCGCTaGCATGAAGTCCATAAAATG +
Preference number: 4 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSQITYR*HEVHKM
Trigger: CATTTTATGGACTTCATGGCAGCGATAAGTAATCTG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CCA 90 bp CAGCTCTTCTGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTAGGAGGTGTGTCTTCTaGGTATTTGTTTCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: QLFWSDVSFKIPVIIIRSRRCVF*VFVSSN
Trigger: GTTAGAAGAAACAAATACCCAGAAGACACACCTCCT...AGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCAGAAGAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAATAGAACAGACTATATaGGGGATTAGTAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSIEQTI*GISSQQ
Trigger: CTGCTGGCTACTAATCCCCCATATAGTCTGTTCTAT...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
3UTR CAA 72 bp GTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTaGTCAGCTCTGACTCCTGCTGTTGTTATTCACAAT +
Preference number: 4 (lower is better)
Translates to: VSIVHLCIILPN*SALTPAVVIHN
Trigger: ATTGTGAATAACAACAGCAGGAGTCAGAGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR TCA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAATTGTTTTCTACTCCTaGGAATCCTCTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSIVFYS*ESSLQK
Trigger: CTTTTGAAGAGAGGATTCTCAGGAGTAGAAAACAAT...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACCTCTATCTCTAGGCTaGAGCAAACAGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPPLSLG*SKQPGE
Trigger: CTCTCCAGGCTGTTTGCTCAAGCCTAGAGATAGAGG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCCCTCTATCTCTAGGCTaGAGCAAACAGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILPLSLG*SKQPGE
Trigger: CTCTCCAGGCTGTTTGCTCAAGCCTAGAGATAGAGG...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAGAATGACACATAGCTaGGCCAGGCTGCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFRMTHS*ARLLEP
Trigger: GGGTTCCAGCAGCCTGGCCAAGCTATGTGTCATTCT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCCCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCATCTCCCACTTTCTACTaGACACTCAGCCTACCGTCT +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPSPTFY*TLSLPS
Trigger: AGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGA...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGCATTTCTTGATCCTTaGTACCCCAAGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPAFLDP*YPKQLF
Trigger: GAACAGCTGCTTGGGGTACAAAGGATCAAGAAATGC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCAGCTTCAGTTTCTGCTaGAGCCTCAAGCCCTATTTC +
Preference number: 5 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILSFSFC*SLKPYF
Trigger: GAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGCT...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAATGCAGATGATGTACTaGCTTGTATGGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPMQMMY*LVWCGQ
Trigger: CTGGCCACACCATACAAGCAAGTACATCATCTGCAT...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp AGCCACTGGAACGGCACAGTGCCTCCTCACAAAGCCCATCCTGGGTATCATGAGGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHWNGTVPPHKAHPGYHEAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...CTCATGATACCCAGGATGGGCTTTGTGAGGAGGCACTGTGCCGTTCCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTTCTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: PSESVSSHVGAVDGNSKCPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...ACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp GAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGCCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ESVSSHVGAVDGNSKCHLPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...CAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp AGCCCTATTTCTGAGCGCTGCTCCTCTCACACACGTCTCCAATCTGCAGTAATGACAACCGTTCAGATGTaGATGAGCCATGCTAGGCAC +
Preference number: 5 (lower is better)
Translates to: SPISERCSSHTRLQSAVMTTVQM*MSHARH
Trigger: GTGCCTAGCATGGCTCATCAACATCTGAACGGTTGT...CATTACTGCAGATTGGAGACGTGTGTGAGAGGAGCAGCGCTCAGAAATAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTCAGACTGAGCAGGACTaGGTGGGGCAGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSQTEQD*VGQHIS
Trigger: AGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCTG...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS TCA 90 bp TTTCCTTCTTCTTTGGCCTCAGTCTCATCACAGAAAGCTGGATCCTaGAGGTCCTTCTTGTGCTCTGCAGCTGAGGGAACTGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: FPSSLASVSSQKAGS*RSFLCSAAEGTDQG
Trigger: TCCCTGATCAGTTCCCTCAGCTGCAGAGCACAAGAAGGACCTTCAGGATCCAGCTTTCTGTGATGAGACTGAGGCCAAAGAAGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505268.1
ENST00000672364.1
CDS-3UTR CAA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCGTGTCTTCTGGGTATTaGTTTCTTCTAACTGCGTCA +
Preference number: 5 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILVSSGY*FLLTAS
Trigger: TGACGCAGTTAGAAGAAACAAATACCCAGAAGACAC...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGTGTCTTCTGGGTATTaGTTTCTTCTAACTGCGTCA +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPVSSGY*FLLTAS
Trigger: TGACGCAGTTAGAAGAAACAAATACCCAGAAGACAC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTTGACACTCAGCCTACCGTCTTGCTCTGCCACTACAAGACCTGGGTCATCCTCCGTAGGCCAATGAGTTaGGAAAGTTTCTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: LDTQPTVLLCHYKTWVILRRPMS*ESFSQF
Trigger: AAACTGTGAGAAACTTTCCAAACTCATTGGCCTACG...GAGGATGACCCAGGTCTTGTAGTGGCAGAGCAAGACGGTAGGCTGAGTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCAGCAAATACGGTTCCCTaGAGGAAAAACAGATGTGAA +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPANTVP*RKNRCE
Trigger: TTCACATCTGTTTTTCCTCAAGGGAACCGTATTTGC...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp GAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGGCATTTCCTATTGCTTaGTACCCCAAGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: ESVSSHVGAVDGNSKCHLAFPIA*YPKQLF
Trigger: GAACAGCTGCTTGGGGTACAAAGCAATAGGAAATGC...CAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp TGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGGTCTCAGGTAGTTTGGGTCCTCAGTTCTaGCTGTCAGCTTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: WVLFCMASPLVSVVVSGSLGPQF*LSAWLL
Trigger: CAGCAACCAAGCTGACAGCAAGAACTGAGGACCCAA...ACTACCTGAGACCACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS CCA 90 bp GTTACAGCAGCCACAGGGGTCATGACTCTCAGGAGGTGTGTCTTCTaGGTATTTGTTTCTTCTAACTGCGTCAATGTAAGCTTCCGTCCA +
Preference number: 5 (lower is better)
Translates to: VTAATGVMTLRRCVF*VFVSSNCVNVSFRP
Trigger: TGGACGGAAGCTTACATTGACGCAGTTAGAAGAAACAAATACCCAGAAGACACACCTCCTGAGAGTCATGACCCCTGTGGCTGCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000302060.10
ENST00000506870.5
ENST00000515277.5
ENST00000515581.5
ENST00000671853.1
ENST00000671889.1
ENST00000672371.1
ENST00000672997.1
CDS-3UTR CAA 90 bp CTTCTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LLSLCPLMSVPSTVIVSVSLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...GACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp CTGAGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LSLCPLMSVPSTVIVSVISLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...GATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp CCTGAACTCCATTCACATAGGCAGGGTAGGCATGGAGCAGGGAGACGGAATCCACTCAAATTAGGCAGTTaGCTAATGCTACTAACTGAG +
Preference number: 5 (lower is better)
Translates to: PELHSHRQGRHGAGRRNPLKLGS*LMLLTE
Trigger: CTCAGTTAGTAGCATTAGCAAACTGCCTAATTTGAG...TGGATTCCGTCTCCCTGCTCCATGCCTACCCTGCCTATGTGAATGGAGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACATCTCCCACTTTCTACTaGACACTCAGCCTACCGTCT +
Preference number: 5 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATSPTFY*TLSLPS
Trigger: AGACGGTAGGCTGAGTGTCAAGTAGAAAGTGGGAGA...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGGGAAAGGTTCTGCTTaGCCAGTCTGGCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATGKGSA*PVWLES
Trigger: TGATTCTAGCCAGACTGGCAAAGCAGAACCTTTCCC...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TGCTTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAACAACCGTTCAGATGTaGATGAGCCATGCTAGGCAC +
Preference number: 5 (lower is better)
Translates to: CFLKSSRDVVLNRCKIATTTVQM*MSHARH
Trigger: GTGCCTAGCATGGCTCATCAACATCTGAACGGTTGT...TGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp AGTCTGTGTCCTCTCATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTGCATTTCCTATTGCTTaGTACCCCAAGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SLCPLMSVPSTVIVSVICAFPIA*YPKQLF
Trigger: GAACAGCTGCTTGGGGTACAAAGCAATAGGAAATGC...ACAGATGACACTTACTATTACCGTCGACGGCACCGACATGAGAGGACACAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp GGCCAGGCTGCTGGAACCCATGTTCCAGTGGCATCTGGAGTTCACTGTATTTTCAGACTTCTTTTCCTTTaGTGCCTTCATGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: GQAAGTHVPVASGVHCIFRLLFL*CLHAVT
Trigger: TGTAACTGCATGAAGGCACAAAAGGAAAAGAAGTCT...GAAAATACAGTGAACTCCAGATGCCACTGGAACATGGGTTCCAGCAGCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGGGAAAGGTTCTGCTTaGCCAGTCTGGCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEGKGSA*PVWLES
Trigger: TGATTCTAGCCAGACTGGCAAAGCAGAACCTTTCCC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGAGAATGACACATAGCTaGGCCAGGCTGCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQRMTHS*ARLLEP
Trigger: GGGTTCCAGCAGCCTGGCCAAGCTATGTGTCATTCT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGCAGACTGAGCAGGACTaGGTGGGGCAGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQQTEQD*VGQHIS
Trigger: AGAAATGTGCTGCCCCACCAAGTCCTGCTCAGTCTG...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAGCATTTCTTGATCCTTaGTACCCCAAGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEAFLDP*YPKQLF
Trigger: GAACAGCTGCTTGGGGTACAAAGGATCAAGAAATGC...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp ATGTTGATGAGCCATGCTAGGCACGTCTGTGTAAATCATGGCCATGCATTGGGAAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: MLMSHARHVCVNHGHALGSLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...TCCCAATGCATGGCCATGATTTACACAGACGTGCCTAGCATGGCTCATCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp GTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAACCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: VSFKIPVIIIRSGSRGSEPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...TTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp CAGCTTGGTTGCTGGGTTCTCTTCTGCATGGCTTCTCCTTTGGTTAGTGTAGTGCGTAGGCCAATGAGTTaGGAAAGTTTCTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: QLGCWVLFCMASPLVSVVRRPMS*ESFSQF
Trigger: AAACTGTGAGAAACTTTCCAAACTCATTGGCCTACG...CACTACACTAACCAAAGGAGAAGCCATGCAGAAGAGAACCCAGCAACCAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAATGCAGATGATGTACTaGCTTGTATGGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEMQMMY*LVWCGQ
Trigger: CTGGCCACACCATACAAGCAAGTACATCATCTGCAT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACTGGAAGCTGCCAGTTTaGCCACATTCTAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHWKLPV*PHSSFV
Trigger: TACAAAACTAGAATGTGGCAAAACTGGCAGCTTCCA...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp ACACAAATGGCTCAACTTGAATTATGTGTTTGGGTCCTCAGTTCTTGCTGTCAGTTGGGTCCTCAGTTCTaGCTGTCAGCTTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TQMAQLELCVWVLSSCCQLGPQF*LSAWLL
Trigger: CAGCAACCAAGCTGACAGCAAGAACTGAGGACCCAA...CTGACAGCAAGAACTGAGGACCCAAACACATAATTCAAGTTGAGCCATTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp CATGGTAGCTGGCTTCCCTCCAAGTACAAAAATGGAAGCTGCCAGTTTTGCCACCACAAATGGCTCAACTaGAATTATGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: HGSWLPSKYKNGSCQFCHHKWLN*NYVFGS
Trigger: GGACCCAAACACATAATTCAAGTTGAGCCATTTGTG...GTGGCAAAACTGGCAGCTTCCATTTTTGTACTTGGAGGGAAGCCAGCTACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp TCGAGGGGCAGTGAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTGTGTCTTCTGGGTATTaGTTTCTTCTAACTGCGTCA +
Preference number: 5 (lower is better)
Translates to: SRGSESHLFISVFIIAKSVSSGY*FLLTAS
Trigger: TGACGCAGTTAGAAGAAACAAATACCCAGAAGACAC...AGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTCACTGCCCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCACCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: VSATLLSVSIVHLCIILPPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS GCA 90 bp CCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTATCAGGATTaGTCAGGACTGCAAATGCATTTCCTATTGCTTTGTACCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PVHLRIHHSEVSYQD*SGLQMHFLLLCTPS
Trigger: GCTTGGGGTACAAAGCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGCTATGATGAATACGGAGATGAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp GGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACATATGAACCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GAVDGNSKCHLSHLKTYEPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...TTCATATGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAACGTAGGCCAATGAGTTaGGAAAGTTTCTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: FLKSSRDVVLNRCKIATERRPMS*ESFSQF
Trigger: AAACTGTGAGAAACTTTCCAAACTCATTGGCCTACG...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CAGTCACTTAATGATCCTTCCAAGTTCAGAGTCATGATAATTCAGGCAGCTCAGAGCTTCAGTTTCTGCTaGAGCCTCAAGCCCTATTTC +
Preference number: 5 (lower is better)
Translates to: QSLNDPSKFRVMIIQAAQSFSFC*SLKPYF
Trigger: GAAATAGGGCTTGAGGCTCAAGCAGAAACTGAAGCT...CTGAGCTGCCTGAATTATCATGACTCTGAACTTGGAAGGATCATTAAGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TTTATTATTTGCTCACAATTCTGCAGACTGAGCAGGACTTGGTGGGGCAGCACATGGAAGCTGCCAGTTTaGCCACATTCTAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: FIICSQFCRLSRTWWGSTWKLPV*PHSSFV
Trigger: TACAAAACTAGAATGTGGCAAAACTGGCAGCTTCCA...TGTGCTGCCCCACCAAGTCCTGCTCAGTCTGCAGAATTGTGAGCAAATAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp CATGTCGGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACAGTGTCTTCTGGGTATTaGTTTCTTCTAACTGCGTCA +
Preference number: 5 (lower is better)
Translates to: HVGAVDGNSKCHLSHLKTVSSGY*FLLTAS
Trigger: TGACGCAGTTAGAAGAAACAAATACCCAGAAGACAC...TGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACCGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp AGCTTCAAAATCCCTGTAATAATTATAAGGTCTGGCTCGAGGGGCAGTGAAAGTAGTCTCTTATCAGGATaGCTCAGGACTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: SFKIPVIIIRSGSRGSESSLLSG*LRTANA
Trigger: TGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACT...ACTTTCACTGCCCCTCGAGCCAGACCTTATAATTATTACAGGGATTTTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000505568.5
ENST00000506870.5
ENST00000671853.1
ENST00000673499.1
CDS-3UTR CAA 90 bp CTCTTTGTGATGAGAAGGATTTTCATCCTCCTTTTCTCACTGCCGATCGTGCGGATAATCCTGCCAAATTaGTCAGCTCTGACTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LFVMRRIFILLFSLPIVRIILPN*SALTFV
Trigger: AACAAAAGTCAGAGCTGACAAATTTGGCAGGATTAT...CCGCACGATCGGCAGTGAGAAAAGGAGGATGAAAATCCTTCTCATCACAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TTCCTAAAGAGCAGCAGGGATGTTGTCCTGAACAGATGCAAGATTGCCACAGAAAGAGAGCATCTTCATTaGAATGAGAGCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: FLKSSRDVVLNRCKIATEREHLH*NESFSF
Trigger: GAAACTGAAGCTCTCATTCAAATGAAGATGCTCTCT...TTCTGTGGCAATCTTGCATCTGTTCAGGACAACATCCCTGCTGCTCTTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTGCTCTGCCCATCATCTGGGGTAACACAAATGGCTCAACTTGAATTATGTGTTCACAAATGGCTCAACTaGAATTATGTGTTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LLCPSSGVTQMAQLELCVHKWLN*NYVFGS
Trigger: GGACCCAAACACATAATTCAAGTTGAGCCATTTGTG...AACACATAATTCAAGTTGAGCCATTTGTGTTACCCCAGATGATGGGCAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515559.2
ENST00000673156.1
CDS-3UTR CAA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAACTGTGCCAGAACCTTaGTTGTTTCTCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: VSATLLSVSIVHLCIILPTVPEP*LFLLPT
Trigger: TGTTGGAAGGAGAAACAACAAAGGTTCTGGCACAGT...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp GTTTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAATAATCCTGCCAAATTaGTCAGCTCTGACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: VSATLLSVSIVHLCIILPIILPN*SALTPA
Trigger: AGCAGGAGTCAGAGCTGACAAATTTGGCAGGATTAT...TGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCACCTCCAAAGAAGACGTaGAACAGCTCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSPPKKT*NSSSGV
Trigger: CACTCCAGAAGAGCTGTTCAACGTCTTCTTTGGAGG...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp GGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACATATGAACAAATGCATTTCCTATaGCTTTGTACCCCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAVDGNSKCHLSHLKTYEQMHFL*LCTPSS
Trigger: GCTGCTTGGGGTACAAAGCAATAGGAAATGCATTTG...TTCATATGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp TTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAAGTGCCAGAACCTTTGTaGTTTCTCCTTCCAACAACT +
Preference number: 5 (lower is better)
Translates to: FSDSAFCFNRSSLYNPAKVPEPL*FLLPTT
Trigger: AGTTGTTGGAAGGAGAAACAACAAAGGTTCTGGCAC...TTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp TTCAGCGACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAAACTGTGCCAGAACCTTaGTTGTTTCTCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: FSDSAFCFNRSSLYNPAKTVPEP*LFLLPT
Trigger: TGTTGGAAGGAGAAACAACAAAGGTTCTGGCACAGT...TTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGTCGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp GAAAGTCACCTGTTCATCTCCGTATTCATCATAGCGAAGTCTCTTATCAGGATTGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: ESHLFISVFIIAKSLIRIAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...AATCCTGATAAGAGACTTCGCTATGATGAATACGGAGATGAACAGGTGACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR CAA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp GGTGCCGTCGACGGTAATAGTAAGTGTCATCTGTCACATTTGAAAACATATGAAGCATTTCCTATTGCTTaGAAAGCATCTGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GAVDGNSKCHLSHLKTYEAFPIA*KASVAP
Trigger: TGGAGCAACAGATGCTTTCAAAGCAATAGGAAATGC...TTCATATGTTTTCAAATGTGACAGATGACACTTACTATTACCGTCGACGGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505568.5
ENST00000673499.1
CDS-3UTR CAA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTGCAAATACGGTTCCCTaGAGGAAAAACAGATGTGAA +
Preference number: 5 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSANTVP*RKNRCE
Trigger: TTCACATCTGTTTTTCCTCAAGGGAACCGTATTTGC...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CAGCTCTTCTGGAGTGATGTCAGCTTCAAAATCCCTGTAATAATTATAAGGTCTCAAATGCATTTCCTATaGCTTTGTACCCCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QLFWSDVSFKIPVIIIRSQMHFL*LCTPSS
Trigger: GCTGCTTGGGGTACAAAGCAATAGGAAATGCATTTG...AGACCTTATAATTATTACAGGGATTTTGAAGCTGACATCACTCCAGAAGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS-3UTR CAA 90 bp CTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCTATAATCCTGCCAAATTaGTCAGCTCTGACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LLSVSIVHLCIILPNLSAIILPN*SALTPA
Trigger: AGCAGGAGTCAGAGCTGACAAATTTGGCAGGATTAT...AGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTCTCAAATTAGGCAGTTaGCTAATGCTACTAACTGAG +
Preference number: 5 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSLKLGS*LMLLTE
Trigger: CTCAGTTAGTAGCATTAGCAAACTGCCTAATTTGAG...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp TCTACCAGAAACTTTTCTTCCAATATGAAGGAAGCATGGAGTGTAGGCTACAGTATAATCCTGCCAAATTaGTCAGCTCTGACTTTTGTT +
Preference number: 5 (lower is better)
Translates to: STRNFSSNMKEAWSVGYSIILPN*SALTFV
Trigger: AACAAAAGTCAGAGCTGACAAATTTGGCAGGATTAT...ACTGTAGCCTACACTCCATGCTTCCTTCATATTGGAAGAAAAGTTTCTGGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS-3UTR CAA 90 bp CTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCAGCTCTCTTCAAAAGACATTaGTTGAGCACTTGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLSVSIVHLCIILPNLSALFKRH*LSTCSE
Trigger: TTCAGAACAAGTGCTCAACAAATGTCTTTTGAAGAG...AGCTGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS-3UTR CAA 90 bp ACTCTGCTTTCTGTTTCAATCGTTCATCTCTGTATAATCCTGCCAAATTTGTCACTCTTCAAAAGACATTaGTTGAGCACTTGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: TLLSVSIVHLCIILPNLSLFKRH*LSTCSE
Trigger: TTCAGAACAAGTGCTCAACAAATGTCTTTTGAAGAG...TGACAAATTTGGCAGGATTATACAGAGATGAACGATTGAAACAGAAAGCAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1
CDS GCA 72 bp CGGTTCCCAATCAGCAGGTCCGCCGAGCCTCCCCCGTaGCCGAGGCTGAAAGAGAAGGGGGCGCGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: RFPISRSAEPPP*PRLKEKGARSA
Trigger: CGCGCTCCGCGCCCCCTTCTCTTTCAGCCTCGGGCACGGGGGAGGCTCGGCGGACCTGCTGATTGGGAACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302060.10
ENST00000672371.1
CDS TCA 72 bp CGAGCCTCCCCCGTGCCCGAGGAGAAAGCTGGATCCTaGAGGTCCTTCTTGTGCTCTGCAGCTGAGGGAACT +
Preference number: 6 (lower is better)
Translates to: RASPVPEEKAGS*RSFLCSAAEGT
Trigger: AGTTCCCTCAGCTGCAGAGCACAAGAAGGACCTTCAGGATCCAGCTTTCTCCTCGGGCACGGGGGAGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000512473.5
ENST00000515581.5
ENST00000671889.1
ENST00000673608.1
CDS CCA 72 bp TCCTTTGTACCCCAAGCAGCTGTTCCTCACTATACGTaGAGTTCCCCTCACCCTGCCGGGTCTGAGTCCACT +
Preference number: 6 (lower is better)
Translates to: SFVPQAAVPHYT*SSPHPAGSEST
Trigger: AGTGGACTCAGACCCGGCAGGGTGAGGGGAACTCCACGTATAGTGAGGAACAGCTGCTTGGGGTACAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000302060.10
ENST00000507405.5
ENST00000515277.5
ENST00000515581.5
ENST00000671889.1
ENST00000672371.1
ENST00000672932.1
ENST00000672997.1
CDS CAA 72 bp CCCCCGTGCCCGAGGATGTTGAACTGTAATGGATTCTaGCTGGTGATACTGAGGTCTGTCCTGTGCCCTATA +
Preference number: 6 (lower is better)
Translates to: PPCPRMLNCNGF*LVILRSVLCPI
Trigger: TATAGGGCACAGGACAGACCTCAGTATCACCAGCAAGAATCCATTACAGTTCAACATCCTCGGGCACGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515277.5
ENST00000672997.1
CDS CAA 90 bp ACCCTGCCGGGTCTGAGTCCACTCATTCTCAGACTTCTTTTCCTTTaGTGCCTTCATGCAGTTACAGCAGCCACAGGGGTCATGACTCTC +
Preference number: 6 (lower is better)
Translates to: TLPGLSPLILRLLFL*CLHAVTAATGVMTL
Trigger: GAGAGTCATGACCCCTGTGGCTGCTGTAACTGCATGAAGGCACAAAAGGAAAAGAAGTCTGAGAATGAGTGGACTCAGACCCGGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000302060.10
ENST00000506870.5
ENST00000507405.5
ENST00000515277.5
ENST00000515581.5
ENST00000671853.1
ENST00000671889.1
ENST00000672371.1
ENST00000672932.1
ENST00000672997.1
CDS TCA 72 bp TCTTTGGCCTCAGTCTCATCACAGAAAGCTGGATCCTaGAGGTCCTTCTTGTGCTCTGCAGCTGAGGGAACT +
Preference number: 6 (lower is better)
Translates to: SLASVSSQKAGS*RSFLCSAAEGT
Trigger: AGTTCCCTCAGCTGCAGAGCACAAGAAGGACCTTCAGGATCCAGCTTTCTGTGATGAGACTGAGGCCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505268.1
ENST00000672364.1
CDS GCA 72 bp AGGAGGTGTGTCTTCTGGGTATTTGTTTCTTCTAACTaGGTCAATGTAAGCTTCCGTCCAGCGCTCCCCGCT +
Preference number: 6 (lower is better)
Translates to: RRCVFWVFVSSN*VNVSFRPALPA
Trigger: AGCGGGGAGCGCTGGACGGAAGCTTACATTGACGCAGTTAGAAGAAACAAATACCCAGAAGACACACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000302060.10
ENST00000506870.5
ENST00000515277.5
ENST00000515581.5
ENST00000671853.1
ENST00000671889.1
ENST00000672371.1
ENST00000672997.1
CDS CAA 90 bp GTAGGACCATTATCCTCTCAGCCACCTCTGCGTAGGCCAATGAGTTaGGAAAGTTTCTCACAGTTTTCAAGTTTCAGCGACTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: VGPLSSQPPLRRPMS*ESFSQFSSFSDSAF
Trigger: GAAAGCAGAGTCGCTGAAACTTGAAAACTGTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAGGTGGCTGAGAGGATAATGGTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302060.10
ENST00000510770.1
ENST00000515559.2
ENST00000672371.1
ENST00000673156.1
ENST00000673423.1
CDS GCA 72 bp GCGAAGTCTCTTATCAGGATTGCTCAGGACTGCAAATaGATTTCCTATTGCTTTGTACCCCAAGCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: AKSLIRIAQDCK*ISYCFVPQAAV
Trigger: AACAGCTGCTTGGGGTACAAAGCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS CCA 72 bp GGTGTAGCCCAAGGTCGATTTATAGAACAGACTATATaGGGGATTAGTAGCCAGCAGCTGAGTAATGACAGA +
Preference number: 6 (lower is better)
Translates to: GVAQGRFIEQTI*GISSQQLSNDR
Trigger: TCTGTCATTACTCAGCTGCTGGCTACTAATCCCCCATATAGTCTGTTCTATAAATCGACCTTGGGCTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302060.10
ENST00000508445.5
ENST00000514052.1
ENST00000672275.1
ENST00000672371.1
ENST00000673261.1
CDS CAA 72 bp TTATCCTCTCAGCCACCTCTGCGTAGGCCAATGAGTTaGGAAAGTTTCTCACAGTTTTCAAGTTTCAGCGAC +
Preference number: 6 (lower is better)
Translates to: LSSQPPLRRPMS*ESFSQFSSFSD
Trigger: GTCGCTGAAACTTGAAAACTGTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAGGTGGCTGAGAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302060.10
ENST00000510770.1
ENST00000515559.2
ENST00000672371.1
ENST00000673156.1
ENST00000673423.1
CDS CAA 72 bp GTCTGGAGGTACTACATGTTGAACTGTAATGGATTCTaGCTGGTGATACTGAGGTCTGTCCTGTGCCCTATA +
Preference number: 6 (lower is better)
Translates to: VWRYYMLNCNGF*LVILRSVLCPI
Trigger: TATAGGGCACAGGACAGACCTCAGTATCACCAGCAAGAATCCATTACAGTTCAACATGTAGTACCTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505268.1
ENST00000515581.5
ENST00000671889.1
ENST00000672364.1
CDS TCA 72 bp GACCATTATCCTCTCAGCCACCTCTGCGTAGGCCAATaGGTTTGGAAAGTTTCTCACAGTTTTCAAGTTTCA +
Preference number: 6 (lower is better)
Translates to: DHYPLSHLCVGQ*VWKVSHSFQVS
Trigger: TGAAACTTGAAAACTGTGAGAAACTTTCCAAACTCATTGGCCTACGCAGAGGTGGCTGAGAGGATAATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302060.10
ENST00000510770.1
ENST00000515559.2
ENST00000672371.1
ENST00000673156.1
ENST00000673423.1
CDS CAA 72 bp GGAGGTACTACTTACATGTTGAACTGTAATGGATTCTaGCTGGTGATACTGAGGTCTGTCCTGTGCCCTATA +
Preference number: 6 (lower is better)
Translates to: GGTTYMLNCNGF*LVILRSVLCPI
Trigger: TATAGGGCACAGGACAGACCTCAGTATCACCAGCAAGAATCCATTACAGTTCAACATGTAAGTAGTACCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512473.5
ENST00000673608.1
CDS GCA 72 bp ATCATAGCGAAGTCTCTTATCAGGATTGCTCAGGACTaGAAATGCATTTCCTATTGCTTTGTACCCCAAGCA +
Preference number: 6 (lower is better)
Translates to: IIAKSLIRIAQD*KCISYCFVPQA
Trigger: TGCTTGGGGTACAAAGCAATAGGAAATGCATTTGCAGTCCTGAGCAATCCTGATAAGAGACTTCGCTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506870.5
ENST00000671853.1
CDS CAA 72 bp TTTTCTACTCCTGAGAATCCTCTCTTCAAAAGACATTaGTTGAGCACTTGTTCTGAAGCAAGGACTGTGCCA +
Preference number: 6 (lower is better)
Translates to: FSTPENPLFKRH*LSTCSEARTVP
Trigger: TGGCACAGTCCTTGCTTCAGAACAAGTGCTCAACAAATGTCTTTTGAAGAGAGGATTCTCAGGAGTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508445.5
ENST00000672275.1