Pregenerated sensors for DNAJC12 (Homo sapiens)
Ensembl gene IDs: ENSG00000108176Ensembl transcript IDs: ENST00000225171.7, ENST00000339758.7, ENST00000480180.1, ENST00000480963.5, ENST00000483798.6
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAATAACAGGGAGTGTGTATACTGAAACAAACAGCCAAAGAGATTaGAAGAAATGTAGTCACAGGCTCTTCTGGCACAAATTCATTGCC | + |
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Preference number: 1 (lower is better) Translates to: AITGSVYTETNSQRD*KKCSHRLFWHKFIA Trigger: GGCAATGAATTTGTGCCAGAAGAGCCTGTGACTACATTTCTTTCAATCTCTTTGGCTGTTTGTTTCAGTATACACACTCCCTGTTATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| 3UTR CCA 90 bp | TTCTGGCACAAATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATaGGATTTACGGACACTGAATTATATCCAGACTCTGCTAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: FWHKFIAFILMSFSS*DLRTLNYIQTLLTS Trigger: AGAAGTTAGCAGAGTCTGGATATAATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAATTTGTGCCAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCCAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCAGGCTGGAGAATGCTTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: FCQDLFNPGVVMGACNLSRLENA*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAAGCATTCTCCAGCCT...GCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTGCTTATAGGAGCAAATaGTGCTGGAAGTCTTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: RGLGSFCSVFSAVEASSSAYRSK*CWKSCE Trigger: CTCGCAAGACTTCCAGCATCATTTGCTCCTATAAGC...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTAATGGCATCGACATCTaGCTCCTTCGCCAGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVNGIDI*LLRQWS Trigger: TGACCACTGGCGAAGGAGCCAGATGTCGATGCCATT...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR GCA 90 bp | GACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCTTCAAAGCTTCCCACTaGTGGAATGGCATCGACATC | + |
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Preference number: 2 (lower is better) Translates to: DFSRGLGSFCSVFSAVEAFKASH*WNGIDI Trigger: GATGTCGATGCCATTCCAGCAGTGGGAAGCTTTGAA...GGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGCCTCTGACAACCCAGTaGATTGACGTCTTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLPLTTQ*IDVFTE Trigger: CTCAGTGAAGACGTCAATGCACTGGGTTGTCAGAGG...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR TCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGGCCTTCTGCAGTTTCTaGAAAGTCTCCACAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLAFCSF*KVSTVL Trigger: CAGAACTGTGGAGACTTTTCAGAAACTGCAGAAGGC...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR TCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGTCCATCTTGGTGGTATaGGTCTTGTCAGATTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLSILVV*VLSDSS Trigger: GGAAGAATCTGACAAGACTCATACCACCAAGATGGA...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTAAGTCTCCACAGTTCTaGGAAGAGAGATCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVKSPQF*EERSHF Trigger: AAAATGAGATCTCTCTTCCCAGAACTGTGGAGACTT...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR CCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGCATTTTCCATCTTGGTaGTATGAGTCTTGTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLHFPSW*YESCQI Trigger: AATCTGACAAGACTCATACCACCAAGATGGAAAATG...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACACAAAGACTGCATGTTaGCAGCATAGGGGACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: MRTDSRMEESISTQQFTDTKTAC*QHRGQS Trigger: AGACTGTCCCCTATGCTGCCAACATGCAGTCTTTGT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| 3UTR CAA 90 bp | ATGGGATTTACGGACACTGAATTATATCCAGACTCTGCTAACTTCTaGGTTTTCTCCCTCCTATCGCCTAATGACTCTTTAAGCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: MGFTDTELYPDSANF*VFSLLSPNDSLSYY Trigger: GTAGTAGCTTAAAGAGTCATTAGGCGATAGGAGGGAGAAAACCAAGAAGTTAGCAGAGTCTGGATATAATTCAGTGTCCGTAAATCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| 3UTR TCA 72 bp | GGGAGTGTGTATACTGAAACAAACAGCCAAAGAGATTaGAAGAAATGTAGTCACAGGCTCTTCTGGCACAAA | + |
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Preference number: 3 (lower is better) Translates to: GSVYTETNSQRD*KKCSHRLFWHK Trigger: TTTGTGCCAGAAGAGCCTGTGACTACATTTCTTTCAATCTCTTTGGCTGTTTGTTTCAGTATACACACTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| 3UTR CCA 72 bp | AAATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATaGGATTTACGGACACTGAATTATATCCAGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: KFIAFILMSFSS*DLRTLNYIQTL Trigger: CAGAGTCTGGATATAATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | TTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGGAGGCAGGCTGGAGAATGCTTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LFNPGVVMGACNLSYSGGRLENA*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAAGCATTCTCCAGCCT...GCCTCCTGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR TCA 90 bp | CAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAAGGCAGAGGTTGCAGTaGGCCGAGATCACGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: QDLFNPGVVMGACNLSYSRQRLQ*AEITPL Trigger: CAATGGCGTGATCTCGGCTCACTGCAACCTCTGCCT...TGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR TCA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTCGTTTTCTCTGCGGTTaGAGCCAGCTCCTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RGLGSFCSVFSAVEASSSRFLCG*SQLLFL Trigger: AAGAAAGAGGAGCTGGCTTCAACCGCAGAGAAAACG...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | TTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGGAGGCGCCTTCTGCAGTTTCTaGAAAGTCTCCACAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LFNPGVVMGACNLSYSGGAFCSF*KVSTAL Trigger: CAAAGCTGTGGAGACTTTTCAGAAACTGCAGAAGGC...GCCTCCTGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR TCA 90 bp | ATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGGAGAGCTACTCAGGAGGCTaGGGCTGGAGAATGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ICSTQVWSWAPVISATQESYSGG*GWRMLE Trigger: TTCAAGCATTCTCCAGCCTCAGCCTCCTGAGTAGCT...CTCCTGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR GCA 90 bp | GACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCCCTCTGACAACCCAGTaGATTGACGTCTTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: DFSRGLGSFCSVFSAVEAPLTTQ*IDVFTE Trigger: CTCAGTGAAGACGTCAATGCACTGGGTTGTCAGAGG...GGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTTCCATCTTGGTGGTATaGGTCTTGTCAGATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RGLGSFCSVFSAVEASSSSILVV*VLSDSS Trigger: GGAAGAATCTGACAAGACTCATACCACCAAGATGGA...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTTCTTGCGAGACATTCTaGTTTAACTCCTGGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RGLGSFCSVFSAVEASSSSCETF*FNSWVY Trigger: GTAGACCCAGGAGTTAAATCAGAATGTCTCGCAAGA...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR GCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGGGCTTGGGTTCTTTCTaGTCCGTTTTCTCTGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLGLGSF*SVFSAV Trigger: AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCC...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGCTTATAGGAGCAAATaGTGCTGGAAGTCTTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVAYRSK*CWKSCE Trigger: CTCGCAAGACTTCCAGCATCATTTGCTCCTATAAGC...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGCCTTCTGCAGTTTCTaGAAAGTCTCCACAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVAFCSF*KVSTVL Trigger: CAGAACTGTGGAGACTTTTCAGAAACTGCAGAAGGC...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR CCA 90 bp | CAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCATTCAGGATGCTTGTCTaGGTGACATTCCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QDLFNPGVVMGACNLSYSFRMLV*VTFQSS Trigger: AGAGCTCTGGAATGTCACCCAGACAAGCATCCTGAA...TGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR CCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTTTCAGGATGCTTGTCTaGGTGACATTCCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVFRMLV*VTFQSS Trigger: AGAGCTCTGGAATGTCACCCAGACAAGCATCCTGAA...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR CCA 90 bp | GAGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTACTTCTCTAGGGGCTTaGGTTCTTTCTGCTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: ETDFSRGLGSFCSVFSAVTSLGA*VLSAPF Trigger: AAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGT...AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR GCA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTTCTGACTTTAAATTCTaGCAGGATTTGTTCAACCGA | + |
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Preference number: 4 (lower is better) Translates to: RGLGSFCSVFSAVEASSSSDFKF*QDLFNR Trigger: TCGGTTGAACAAATCCTGGCAGAATTTAAAGTCAGA...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR GCA 90 bp | TTCTGCCAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTCTGACTTTAAATTCTaGCAGGATTTGTTCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: FCQDLFNPGVVMGACNLSSDFKF*QDLFNP Trigger: TGGGTTGAACAAATCCTGGCAGAATTTAAAGTCAGA...GCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR CCA 90 bp | GACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCCATTTTCCATCTTGGTaGTATGAGTCTTGTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: DFSRGLGSFCSVFSAVEAHFPSW*YESCQI Trigger: AATCTGACAAGACTCATACCACCAAGATGGAAAATG...GGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | CAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAATCTTCAGTATCTTCTaGCCTGTAATTCAGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: QDLFNPGVVMGACNLSYSIFSIF*PVIQYC Trigger: GCAATACTGAATTACAGGTCAGAAGATACTGAAGAT...TGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR TCA 90 bp | AGACTGACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGATCTTCAGTATCTTCTaGCCTGTAATTCAGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: RLTSLGAWVLSAPFSLRLIFSIF*PVIQYC Trigger: GCAATACTGAATTACAGGTCAGAAGATACTGAAGAT...CAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR TCA 90 bp | TCTGCTAACTTCTTGGTTTTCTCCCTCCTATCGCCTAATGACTCTTTAAGCTACACCCACCGTCTTCACTaGGTCATTCAAAGCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SANFLVFSLLSPNDSLSYTHRLH*VIQSFP Trigger: TGGGAAGCTTTGAATGACTCAGTGAAGACGGTGGGT...GTAGCTTAAAGAGTCATTAGGCGATAGGAGGGAGAAAACCAAGAAGTTAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCTGAGGGAGCATCCTTaGACCAGCGGAAACGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDLREHP*TSGNEG Trigger: ACCTTCGTTTCCGCTGGTCCAAGGATGCTCCCTCAG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGGATGCTTGTCTGGGTaGCATTCCAGAGCTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDGCLSG*HSRALT Trigger: AGTCAGAGCTCTGGAATGTCACCCAGACAAGCATCC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACAATGGCATCGACATCTaGCTCCTTCGCCAGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDNGIDI*LLRQWS Trigger: TGACCACTGGCGAAGGAGCCAGATGTCGATGCCATT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCGTTTTCTCTGCGGTTaGAGCCAGCTCCTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDRFLCG*SQLLFL Trigger: AAGAAAGAGGAGCTGGCTTCAACCGCAGAGAAAACG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | AACTTCTTGGTTTTCTCCCTCCTATCGCCTAATGACTCTTTAAGCTACTACATGAATCCATGGGCATCCTaGGCTTCACAAATTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: NFLVFSLLSPNDSLSYYMNPWAS*ASQIHV Trigger: GACGTGAATTTGTGAAGCTCAGGATGCCCATGGATT...CATGTAGTAGCTTAAAGAGTCATTAGGCGATAGGAGGGAGAAAACCAAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCCTCTGACAACCCAGTaGATTGACGTCTTCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDPLTTQ*IDVFTE Trigger: CTCAGTGAAGACGTCAATGCACTGGGTTGTCAGAGG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGGCTTGGGTTCTTTCTaGTCCGTTTTCTCTGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDGLGSF*SVFSAV Trigger: AACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCAGCGGAAACGAAGGTaGCAACCATTCACATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDQRKRR*QPFTSA Trigger: TGCAGATGTGAATGGTTGGCACCTTCGTTTCCGCTG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGCCTTCTGCAGTTTCTaGAAAGTCTCCACAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDAFCSF*KVSTAL Trigger: CAAAGCTGTGGAGACTTTTCAGAAACTGCAGAAGGC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | TTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATGCCTTCTGCAGTTTCTaGAAAGTCTCCACAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FIAFILMSFSSWDLRTLNAFCSF*KVSTAL Trigger: CAAAGCTGTGGAGACTTTTCAGAAACTGCAGAAGGC...ATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACTTCAAAGCTTCCCACTaGTGGAATGGCATCGACATC | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDFKASH*WNGIDI Trigger: GATGTCGATGCCATTCCAGCAGTGGGAAGCTTTGAA...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR GCA 90 bp | ATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATTCAAAGCTTCCCACTaGTGGAATGGCATCGACATC | + |
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Preference number: 4 (lower is better) Translates to: IHCLYSDELLFMGFTDTEFKASH*WNGIDI Trigger: GATGTCGATGCCATTCCAGCAGTGGGAAGCTTTGAA...TTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACTTCAGGATGCTTGTCTaGGTGACATTCCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDFRMLV*VTFQSS Trigger: AGAGCTCTGGAATGTCACCCAGACAAGCATCCTGAA...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CCA 90 bp | ATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATTCAGGATGCTTGTCTaGGTGACATTCCAGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHCLYSDELLFMGFTDTEFRMLV*VTFQSS Trigger: AGAGCTCTGGAATGTCACCCAGACAAGCATCCTGAA...TTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACACTTCTCTAGGGGCTTaGGTTCTTTCTGCTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDTSLGA*VLSAPF Trigger: AAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| 3UTR CAA 72 bp | ACGGACACTGAATTATATCCAGACTCTGCTAACTTCTaGGTTTTCTCCCTCCTATCGCCTAATGACTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: TDTELYPDSANF*VFSLLSPNDSL Trigger: TAAAGAGTCATTAGGCGATAGGAGGGAGAAAACCAAGAAGTTAGCAGAGTCTGGATATAATTCAGTGTCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACTCCATCTTGGTGGTATaGGTCTTGTCAGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDSILVV*VLSDSS Trigger: GGAAGAATCTGACAAGACTCATACCACCAAGATGGA...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | TTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATGGGATTTACGGACACTaGATTATATCCAGACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FIAFILMSFSSWDLRTLNGIYGH*IISRLC Trigger: GCAGAGTCTGGATATAATTCAGTGTCCGTAAATCCC...ATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | ATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAAAGGGAGTGTGTATACTaGAACAAACAGCCAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IHCLYSDELLFMGFTDTERECVY*NKQPKR Trigger: TCTCTTTGGCTGTTTGTTTCAGTATACACACTCCCT...TTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | AAGAAATGTAGTCACAGGCTCTTCTGGCACAAATTCATTGCCTTTATTCTGATGATTCATGGCTTTCTCTaGCTAATCAGATCCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KKCSHRLFWHKFIAFILMIHGFL*LIRSCL Trigger: AAGGCAGGATCTGATTAGTCAGAGAAAGCCATGAAT...CATCAGAATAAAGGCAATGAATTTGTGCCAGAAGAGCCTGTGACTACATTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGAAGAATCTGAATTTTaGGGGGAGACTGACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDEESEF*GETDFS Trigger: AGAGAAGTCAGTCTCCCCGCAAAATTCAGATTCTTC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CCA 90 bp | AACTTCTTGGTTTTCTCCCTCCTATCGCCTAATGACTCTTTAAGCTACTACATGATGAGCTTCTCTTCATaGGATTTACGGACACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: NFLVFSLLSPNDSLSYYMMSFSS*DLRTLN Trigger: ATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCAT...CATGTAGTAGCTTAAAGAGTCATTAGGCGATAGGAGGGAGAAAACCAAGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACAAGCATTATGAGAACTaGTTCAAGGATGGAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDKHYEN*FKDGGI Trigger: GATTCCTCCATCCTTGAATCAGTTCTCATAATGCTT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | ATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAAAACAGCCAAAGAGATTaGAAGAAATGTAGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHCLYSDELLFMGFTDTENSQRD*KKCSHR Trigger: CCTGTGACTACATTTCTTTCAATCTCTTTGGCTGTT...TTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR TCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACATCTTCAGTATCTTCTaGCCTGTAATTCAGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDIFSIF*PVIQYC Trigger: GCAATACTGAATTACAGGTCAGAAGATACTGAAGAT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR GCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACTCTGACTTTAAATTCTaGCAGGATTTGTTCAACCGA | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDSDFKF*QDLFNR Trigger: TCGGTTGAACAAATCCTGGCAGAATTTAAAGTCAGA...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR GCA 90 bp | ATTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATCTGACTTTAAATTCTaGCAGGATTTGTTCAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: IHCLYSDELLFMGFTDTESDFKF*QDLFNR Trigger: TCGGTTGAACAAATCCTGGCAGAATTTAAAGTCAGA...TTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCATTTTCCATCTTGGTaGTATGAGTCTTGTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDHFPSW*YESCQI Trigger: AATCTGACAAGACTCATACCACCAAGATGGAAAATG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CCA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGAACTGATTCAAGGATaGAGGAATCAATTAGTACTC | + |
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Preference number: 4 (lower is better) Translates to: MRTDSRMEESISTQQFTDELIQG*RNQLVL Trigger: GAGTACTAATTGATTCCTCCATCCTTGAATCAGTTC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR TCA 90 bp | ATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATTATATCTTCAGTATCTTCTaGCCTGTAATTCAGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: IAFILMSFSSWDLRTLNYIFSIF*PVIQYC Trigger: GCAATACTGAATTACAGGTCAGAAGATACTGAAGAT...ATAATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CAA 90 bp | AGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCAGCTCCTCTGACTTCTCTAGGGGCTaGGGTTCTTTCTGCTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: RGLGSFCSVFSAVEASSSDFSRG*GSFCSV Trigger: AACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC...AGAGGAGCTGGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR CAA 90 bp | CAGGATTTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGCCGAGATCACGCCATaGCACTCCAGCCTAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: QDLFNPGVVMGACNLSYSAEITP*HSSLDN Trigger: GTTGTCTAGGCTGGAGTGCAATGGCGTGATCTCGGC...TGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAAATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR CAA 90 bp | GACTTCTCTAGGGGCTTGGGTTCTTTCTGCTCCGTTTTCTCTGCGGTTGAAGCCCCGTTTTCTCTGCGGTaGAAGCCAGCTCCTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DFSRGLGSFCSVFSAVEAPFSLR*KPAPLS Trigger: AGAAAGAGGAGCTGGCTTCAACCGCAGAGAAAACGG...GGCTTCAACCGCAGAGAAAACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000480963.5 |
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| CDS-3UTR CAA 90 bp | TTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGGAGGCAAAGTCTCCACAGCTTaGGGGTTTTCAGGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LFNPGVVMGACNLSYSGGKVSTA*GFSGCL Trigger: CAAGCATCCTGAAAACCCCAAAGCTGTGGAGACTTT...GCCTCCTGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS-3UTR CAA 90 bp | TTGTTCAACCCAGGTGTGGTCATGGGCGCCTGTAATCTCAGCTACTCAGGAGGCAAATTCTGCCAGGATTaGTTCAACCCAGGTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LFNPGVVMGACNLSYSGGKFCQD*FNPGVV Trigger: GACCACACCTGGGTTGAACAAATCCTGGCAGAATTT...GCCTCCTGAGTAGCTGAGATTACAGGCGCCCATGACCACACCTGGGTTGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480180.1 |
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| CDS GCA 90 bp | CTCAGGAGTTCTGAGGGAGCATCCTTGGACCAGCGGAAACGAAGGTaGCAACCATTCACATCTGCAAAACCTGAAGAATCTGAATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LRSSEGASLDQRKRR*QPFTSAKPEESEFC Trigger: GCAAAATTCAGATTCTTCAGGTTTTGCAGATGTGAATGGTTGGCACCTTCGTTTCCGCTGGTCCAAGGATGCTCCCTCAGAACTCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225171.7 ENST00000483798.6 |
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| CDS-3UTR CAA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACTCTGAGGGAGCATCCTaGGACCAGCGGAAACGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRTDSRMEESISTQQFTDSEGAS*DQRKRR Trigger: CCTTCGTTTCCGCTGGTCCAAGGATGCTCCCTCAGA...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CAA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACCCGTTTTCTCTGCGGTaGAAGCCAGCTCCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRTDSRMEESISTQQFTDPFSLR*KPAPLS Trigger: AGAAAGAGGAGCTGGCTTCAACCGCAGAGAAAACGG...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CAA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACGACTTCTCTAGGGGCTaGGGTTCTTTCTGCTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: MRTDSRMEESISTQQFTDDFSRG*GSFCSV Trigger: AACGGAGCAGAAAGAACCCAAGCCCCTAGAGAAGTC...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CAA 90 bp | ATGAGAACTGATTCAAGGATGGAGGAATCAATTAGTACTCAGCAATTCACAGACAAAGTCTCCACAGCTTaGGGGTTTTCAGGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MRTDSRMEESISTQQFTDKVSTA*GFSGCL Trigger: CAAGCATCCTGAAAACCCCAAAGCTGTGGAGACTTT...GTCTGTGAATTGCTGAGTACTAATTGATTCCTCCATCCTTGAATCAGTTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225171.7 |
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| CDS-3UTR CAA 90 bp | TTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATAAAGTCTCCACAGCTTaGGGGTTTTCAGGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FIAFILMSFSSWDLRTLNKVSTA*GFSGCL Trigger: CAAGCATCCTGAAAACCCCAAAGCTGTGGAGACTTT...ATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS-3UTR CAA 90 bp | TTCATTGCCTTTATTCTGATGAGCTTCTCTTCATGGGATTTACGGACACTGAATGACTCTGCTAACTTCTaGGTTTTCTCCCTCCTATCG | + |
|
Preference number: 5 (lower is better) Translates to: FIAFILMSFSSWDLRTLNDSANF*VFSLLS Trigger: CGATAGGAGGGAGAAAACCAAGAAGTTAGCAGAGTC...ATTCAGTGTCCGTAAATCCCATGAAGAGAAGCTCATCAGAATAAAGGCAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339758.7 |
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| CDS GCA 72 bp | TCTGAGGGAGCATCCTTGGACCAGCGGAAACGAAGGTaGCAACCATTCACATCTGCAAAACCTGAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGASLDQRKRR*QPFTSAKPEES Trigger: AGATTCTTCAGGTTTTGCAGATGTGAATGGTTGGCACCTTCGTTTCCGCTGGTCCAAGGATGCTCCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225171.7 ENST00000483798.6 |
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| CDS TCA 72 bp | CTTCTGACCTGTAATTCAGTATTGCATCCATTTAGATaGCTTAATCAGTCCTTCTTCCCTCGGAAACAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLTCNSVLHPFR*LNQSFFPRKQE Trigger: CTCTTGTTTCCGAGGGAAGAAGGACTGATTAAGTCATCTAAATGGATGCAATACTGAATTACAGGTCAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000225171.7 ENST00000339758.7 ENST00000480180.1 ENST00000480963.5 ENST00000483798.6 |
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