RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJB5 (Homo sapiens)

Ensembl gene IDs: ENSG00000137094

Ensembl transcript IDs: ENST00000312316.9, ENST00000443266.2, ENST00000453597.8, ENST00000454002.6, ENST00000458263.6, ENST00000469798.5, ENST00000537321.5, ENST00000539059.1, ENST00000541010.5, ENST00000545841.5, ENST00000682809.1, ENST00000684748.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGTCCCCCACCTCTTAGCCTTAATACCTCAGGCCCCATTCCCTaGCCTCCACCCTTGAACACTCCTGAGAGCAGCAGGGAGGACAGA +
Preference number: 1 (lower is better)
Translates to: PCPPPLSLNTSGPIP*PPPLNTPESSREDR
Trigger: TCTGTCCTCCCTGCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGGGAATGGGGCCTGAGGTATTAAGGCTAAGAGGTGGGGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR TCA 90 bp CTCTTAGCCTTAATACCTCAGGCCCCATTCCCTGCCCTCCACCCTTaGACACTCCTGAGAGCAGCAGGGAGGACAGAACCTCCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: LLALIPQAPFPALHP*TLLRAAGRTEPPAL
Trigger: CAGAGCTGGAGGTTCTGTCCTCCCTGCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGGGAATGGGGCCTGAGGTATTAAGGCTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CCA 90 bp AAAGTTGCCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTaGAGTGAGTGTTGGGGGTATTGCTGTGGTAGGCTCTGGACTGGC +
Preference number: 1 (lower is better)
Translates to: KVASVQWTSSWVHIE*SECWGYCCGRLWTG
Trigger: GCCAGTCCAGAGCCTACCACAGCAATACCCCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGGCAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR GCA 90 bp CTTTCTCCCAGAGAGGCACAGACAGCTCTAGGTGAGTGCTTCTTGTaGATGAATATGTGTGCCATTACCTTGGACACTGTGGACCTGGGG +
Preference number: 1 (lower is better)
Translates to: LSPREAQTALGECFL*MNMCAITLDTVDLG
Trigger: CCCCAGGTCCACAGTGTCCAAGGTAATGGCACACATATTCATGCACAAGAAGCACTCACCTAGAGCTGTCTGTGCCTCTCTGGGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR GCA 90 bp GGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACATaGTATGTACAGGCATGGATAAGGAATCTCTACATATCTTCAAGT +
Preference number: 1 (lower is better)
Translates to: GREGTGISKAEGRRT*YVQAWIRNLYISSS
Trigger: ACTTGAAGATATGTAGAGATTCCTTATCCATGCCTGTACATAGCATGTCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CCA 90 bp GGTATTAGCAAAGCTGAGGGGAGGAGGACATGCTATGTACAGGCATaGATAAGGAATCTCTACATATCTTCAAGTAGCACTCAGGTCACT +
Preference number: 1 (lower is better)
Translates to: GISKAEGRRTCYVQA*IRNLYISSSSTQVT
Trigger: AGTGACCTGAGTGCTACTTGAAGATATGTAGAGATTCCTTATCCATGCCTGTACATAGCATGTCCTCCTCCCCTCAGCTTTGCTAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGCGCCGAGGGTACAGTaGTTCTGGGGCTCGCCTTGG +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVAPRVQ*FWGSPW
Trigger: CCAAGGCGAGCCCCAGAACCACTGTACCCTCGGCGC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCAGCTCGTGCACCACTaGGGGGTCCTGCACCTTGCG +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVQLVHH*GVLHLA
Trigger: CGCAAGGTGCAGGACCCCCCAGTGGTGCACGAGCTG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR GCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGGGGGTCCTGCACCTTaGGCCGAGGGTACAGTGGTT +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVGGPAP*AEGTVV
Trigger: AACCACTGTACCCTCGGCGCAAGGTGCAGGACCCCC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR GCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGGATCTTGTCCTCGGTaGGCACAGTTCGCCCATCAG +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVGSCPR*AQFAHQ
Trigger: CTGATGGGCGAACTGTGCGCACCGAGGACAAGATCC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGGATGTTGTCAGGTGTaGCGTCGCCTTCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVGCCQV*RRLLWG
Trigger: TCCCCAAAGAAGGCGACGCCACACCTGACAACATCC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR CAA 90 bp CCTCTTAGCCTTAATACCTCAGGCCCCATTCCCTGCCCTCCACCCTaGAACACTCCTGAGAGCAGCAGGGAGGACAGAACCTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: PLSLNTSGPIPCPPP*NTPESSREDRTSSS
Trigger: AGAGCTGGAGGTTCTGTCCTCCCTGCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGGGAATGGGGCCTGAGGTATTAAGGCTAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGAACATTGACCCCTaGCCTGGGCTAGCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMNIDP*PGLALP
Trigger: GGGGAGAGCTAGCCCAGGCCAGGGGTCAATGTTCAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR GCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCGCTTGATGACTATGTaGAGGATCTTGTCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVRLMTM*RILSSV
Trigger: CACCGAGGACAAGATCCTGCACATAGTCATCAAGCG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGAGTGTTGGGGGTATTaGTGTGGTAGGCTCTGGACT +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGECWGY*CGRLWT
Trigger: AGTCCAGAGCCTACCACAGCAATACCCCCAACACTC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGAGTGGAGTGAGTGTTaGGGGTATTGCTGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGEWSEC*GYCCGR
Trigger: CCTACCACAGCAATACCCCCAACACTCACTCCACTC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGACATCAAGCTGGGTaGACATTGAGTGGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGHQAG*TLSGVS
Trigger: ACTCACTCCACTCAATGTGCACCCAGCTTGATGTCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGGGTGCACATTGAGTaGAGTGAGTGTTGGGGGTAT +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGWVHIE*SECWGY
Trigger: ATACCCCCAACACTCACTCCACTCAATGTGCACCCA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACAGTGGACATCAAGCTaGGTGCACATTGAGTGGAGT +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGQWTSS*VHIEWS
Trigger: ACTCCACTCAATGTGCACCCAGCTTGATGTCCACTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCACTCTCCAGCCACTaGAGTGGAAACTGGATTGAA +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSLSSH*SGNWIE
Trigger: TTCAATCCAGTTTCCACTGCAGTGGCTGGAGAGTGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CAA 90 bp CTCCTTTCTCCCAGAGAGGCACAGACAGCTCTAGGTGAGTGCTTCTaGTGCATGAATATGTGTGCCATTACCTTGGACACTGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: LLSPREAQTALGECF*CMNMCAITLDTVDL
Trigger: CAGGTCCACAGTGTCCAAGGTAATGGCACACATATTCATGCACAAGAAGCACTCACCTAGAGCTGTCTGTGCCTCTCTGGGAGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACATTTTAGAAAAAGTTaGCAGTGTCCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGHFRKS*QCPVDI
Trigger: GATGTCCACTGGACACTGGCAACTTTTTCTAAAATG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGCTATGTACAGGCATaGATAAGGAATCTCTACATA +
Preference number: 2 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGCYVQA*IRNLYI
Trigger: TATGTAGAGATTCCTTATCCATGCCTGTACATAGCA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGTTCGCCCATCAGGGTaGAGGCGACGCCTTGTGATC +
Preference number: 3 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVVRPSG*RRRLVI
Trigger: GATCACAAGGCGTCGCCTCAACCCTGATGGGCGAAC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCATGTCAGCAGGGATGTaGTCAGGTGTGGCGTCGCCT +
Preference number: 3 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVMSAGM*SGVASP
Trigger: AGGCGACGCCACACCTGACAACATCCCTGCTGACAT...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCACTATGTGCAGGATCTaGTCCTCGGTGCGCACAGTT +
Preference number: 3 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVTMCRI*SSVRTV
Trigger: AACTGTGCGCACCGAGGACAAGATCCTGCACATAGT...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACAAGCTGGGTGCACATaGAGTGGAGTGAGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGQAGCT*SGVSVG
Trigger: CCCAACACTCACTCCACTCAATGTGCACCCAGCTTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR GCA 72 bp TTGGTGCCTTCCTTCCAGCCACGCTTGATGACTATGTaGAGGATCTTGTCCTCGGTGCGCACAGTTCGCCCA +
Preference number: 3 (lower is better)
Translates to: LVPSFQPRLMTM*RILSSVRTVRP
Trigger: TGGGCGAACTGTGCGCACCGAGGACAAGATCCTGCACATAGTCATCAAGCGTGGCTGGAAGGAAGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469798.5
3UTR CCA 72 bp ACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTaGGGGTATTGCTGTGGTAGGCTCTGGACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: TSSWVHIEWSEC*GYCCGRLWTGW
Trigger: CCAGCCAGTCCAGAGCCTACCACAGCAATACCCCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CCA 72 bp AGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTaGAGTGAGTGTTGGGGGTATTGCTGTGGTAGGCTC +
Preference number: 3 (lower is better)
Translates to: SVQWTSSWVHIE*SECWGYCCGRL
Trigger: GAGCCTACCACAGCAATACCCCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR GCA 72 bp CTTTCTCCCAGAGAGGCACAGACAGCTCTAGGTGAGTaGTTCTTGTGCATGAATATGTGTGCCATTACCTTG +
Preference number: 3 (lower is better)
Translates to: LSPREAQTALGE*FLCMNMCAITL
Trigger: CAAGGTAATGGCACACATATTCATGCACAAGAAGCACTCACCTAGAGCTGTCTGTGCCTCTCTGGGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CCA 72 bp TTAGAAAAAGTTGCCAGTGTCCAGTGGACATCAAGCTaGGTGCACATTGAGTGGAGTGAGTGTTGGGGGTAT +
Preference number: 3 (lower is better)
Translates to: LEKVASVQWTSS*VHIEWSECWGY
Trigger: ATACCCCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGGCAACTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCGCCGCCGTGGTCCGTaGGACAGCCGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVRRRGP*DSRCPL
Trigger: GAGGGGGCAGCGGCTGTCTCACGGACCACGGCGGCG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCTGCGGGCGCCGCCGTaGTCCGTGAGACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVLRAPP*SVRQPL
Trigger: CAGCGGCTGTCTCACGGACCACGGCGGCGCCCGCAG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACGCCGCCGTGGTCCGTaGGACAGCCGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRRRGP*DSRCPL
Trigger: GAGGGGGCAGCGGCTGTCTCACGGACCACGGCGGCG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312316.9
ENST00000453597.8
CDS-3UTR TCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGTCTCCTTGTTTCGGTaGGGAGCTGCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVVSLFR*GAAGAA
Trigger: GGCGGCGCCCGCAGCTCCTCACCGAAACAAGGAGAC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR TCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCTGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVLGQSH*RAEWSG
Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCAG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGGACAGGAGTCGCCTaGCCGCCGGCCGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGTGVA*PPAADS
Trigger: GCTATCGGCGGCCGGCGGGCAGGCGACTCCTGTCCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000312316.9
ENST00000453597.8
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTGCGGGCGCCGCCGTaGTCCGTGAGACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLRAPP*SVRQPL
Trigger: CAGCGGCTGTCTCACGGACCACGGCGGCGCCCGCAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312316.9
ENST00000453597.8
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCCTCGGGCCTGCAGTaGGGGTGCTGCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSSGLQ*GCCWGW
Trigger: CCACCCCCAGCAGCACCCCCACTGCAGGCCCGAGGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454002.6
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTCTCCTTGTTTCGGTaGGGAGCTGCGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVSLFR*GAAGAA
Trigger: GGCGGCGCCCGCAGCTCCTCACCGAAACAAGGAGAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312316.9
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGGCCCGAGAGGCAGTaGGCTCCTGTCGCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGPERQ*APVASH
Trigger: GTGAGAGGCGACAGGAGCTCACTGCCTCTCGGGCCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACAAGCCCCTCACCTCTaGTCGCTCCACCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGQAPHL*SLHRSR
Trigger: CCGGCTCCGGTGGAGCGATCAGAGGTGAGGGGCTTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454002.6
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCCCGGGAGGGAGGATaGCAGTGGCCCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGAREGG*QWPSSA
Trigger: GGCTGAGGAGGGCCACTGTCATCCTCCCTCCCGGGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTGCAGTGGGGGTGCTaGGGTGAGGAGCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLQWGC*GEELRA
Trigger: CGCCCGCAGCTCCTCACCGCAGCACCCCCACTGCAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGCCTGCAGTGGGGGTaGTGCGGTGAGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGLQWG*CGEELR
Trigger: CCGCAGCTCCTCACCGCAGCACCCCCACTGCAGGCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCCTCGGGCCTGCAGTaGGGGTGCTGCGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSSGLQ*GCCGEE
Trigger: CTCCTCACCGCAGCACCCCCACTGCAGGCCCGAGGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGCCACTGGAGCCACCTaGTGTGCCACCGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGATGAT*CATAGL
Trigger: AAGACCGGCGGTGGCACATCAGGTGGCTCCAGTGGC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACTGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLGQSH*RAEWSG
Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCAG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPPEPA*SAAALE
Trigger: TTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAAAGCTCCTCGGGCCTaGAGTGGGGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGKAPRA*SGGAAG
Trigger: CCCAGCAGCACCCCCACTGCAGGCCCGAGGAGCTTT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454002.6
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAAAGCTCCTCGGGCCTaGAGTGGGGGTGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGKAPRA*SGGAAV
Trigger: CACCGCAGCACCCCCACTGCAGGCCCGAGGAGCTTT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGCGCCGAGGGTACAGTaGTTCTGGGGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGAPRVQ*FWGSPW
Trigger: CCAAGGCGAGCCCCAGAACCACTGTACCCTCGGCGC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACAGCTCGTGCACCACTaGGGGGTCCTGCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGQLVHH*GVLHLA
Trigger: CGCAAGGTGCAGGACCCCCCAGTGGTGCACGAGCTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCCACTGGAGCCACCTaGTGTGCCACCGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGATGAT*CATAGL
Trigger: AAGACCGGCGGTGGCACATCAGGTGGCTCCAGTGGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLGQSH*RAEWSG
Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGGGTGGCTAGGCCCTaGGTTCAGAGGTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGVARP*VQRCGE
Trigger: TTCCCCACACCTCTGAACTCAGGGCCTAGCCACCCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTGTCTGGCTGGCTGTaGGCGGCTGTATGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVSGWL*AAVWQR
Trigger: ACGCTGCCATACAGCCGCTCACAGCCAGCCAGACAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACTCCGCGCCGCCCATTaGACCGTCTTCCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLRAAH*TVFLSL
Trigger: GAGTGACAGGAAGACGGTTCAATGGGCGGCGCGGAG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGGAGCCACCTGATGTaGCACCGCCGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGWSHLM*HRRSSG
Trigger: GCCTGAAGACCGGCGGTGGCACATCAGGTGGCTCCA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGGGGTCCTGCACCTTaGGCCGAGGGTACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGGPAP*AEGTVV
Trigger: AACCACTGTACCCTCGGCGCAAGGTGCAGGACCCCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGAGLKC*SSGSHL
Trigger: GAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCGCCGAGGGTACAGTaGTTCTGGGGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGAPRVQ*FWGSPW
Trigger: CCAAGGCGAGCCCCAGAACCACTGTACCCTCGGCGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCAGCTCGTGCACCACTaGGGGGTCCTGCACCTTGCG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGQLVHH*GVLHLA
Trigger: CGCAAGGTGCAGGACCCCCCAGTGGTGCACGAGCTG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGCTGTGGTAGGCTCTaGACTGGCTGGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGCCGRL*TGWGRA
Trigger: GGCTCTGCCCCAGCCAGTCCAGAGCCTACCACAGCA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCTGTCGCCTCTCACTaGGGAGGACCCGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPVASH*GGPDPN
Trigger: ATTGGGGTCGGGTCCTCCCCAGTGAGAGGCGACAGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCCCTACTCAGCCCATTaGAGCCAAAACGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVPYSAH*SQNGRK
Trigger: CTTTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCTGCCCTCCACCCTTaGACACTCCTGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPALHP*TLLRAA
Trigger: TGCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGGGTGGCTAGGCCCTaGGTTCAGAGGTGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGVARP*VQRCGE
Trigger: TTCCCCACACCTCTGAACTCAGGGCCTAGCCACCCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAACCCCAGGATCTGGCTaGAGCAGTCTTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGTPGSG*SSLPPA
Trigger: AGCTGGGGGAAGACTGCTTCAGCCAGATCCTGGGGT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGGCAGCGTGTCAGTaGGGCTGGGAGTGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMAACQ*GWECKR
Trigger: ACGCTTGCACTCCCAGCCTCACTGACACGCTGCCAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTGTCTGGCTGGCTGTaGGCGGCTGTATGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVSGWL*AAVWQR
Trigger: ACGCTGCCATACAGCCGCTCACAGCCAGCCAGACAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGGGCTTCTCAAAGGTaGCCAGAGCCCGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGWASQR*PEPGRE
Trigger: CTCCCTCCCGGGCTCTGGTCACCTTTGAGAAGCCCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGGAGCCACCTGATGTaGCACCGCCGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGWSHLM*HRRSSG
Trigger: GCCTGAAGACCGGCGGTGGCACATCAGGTGGCTCCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGGGGTCCTGCACCTTaGGCCGAGGGTACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGGPAP*AEGTVV
Trigger: AACCACTGTACCCTCGGCGCAAGGTGCAGGACCCCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCTGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVCRARW*HLGGSV
Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACAGAACCTCCAGCTCTaGAGGTGTAGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGQNLQL*RCRQGS
Trigger: GCTGCCCTGCCTACACCTGCAGAGCTGGAGGTTCTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGAGLKC*SSGSHL
Trigger: GAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCCACTGGACCAGCACTaGTCTCCTTGTTTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVPLDQH*SPCFGE
Trigger: CTCACCGAAACAAGGAGACCAGTGCTGGTCCAGTGG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVRRKCA*GLSLST
Trigger: TGTGCTCAAAGACAAGCCCCATGCACACTTCCGCCG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVHCRAR*CHLGGS
Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGCTGTGGTAGGCTCTaGACTGGCTGGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGCCGRL*TGWGRA
Trigger: GGCTCTGCCCCAGCCAGTCCAGAGCCTACCACAGCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAGGTGCAGCAGTGTCTaGCTGGCTGTGAGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRCSSV*LAVSGC
Trigger: ACAGCCGCTCACAGCCAGCCAGACACTGCTGCACCT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCGCTTCCTCCCCATACTaGTCATACAGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVASSPY*SYRPRF
Trigger: GAAACGGGGCCTGTATGACCAGTATGGGGAGGAAGC...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGAATAGCTGCCACCTaGCCCCAAAGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGIAAT*PQSPFP
Trigger: AGGGAAAGGGCTTTGGGGTCAGGTGGCAGCTATTCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACCCCAGGATCTGGCTaGAGCAGTCTTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTPGSG*SSLPPA
Trigger: AGCTGGGGGAAGACTGCTTCAGCCAGATCCTGGGGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGGCAGCGTGTCAGTaGGGCTGGGAGTGCAAGCGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMAACQ*GWECKR
Trigger: ACGCTTGCACTCCCAGCCTCACTGACACGCTGCCAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAGCAGGTGCCGGACCTaGTCCCCAAATGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSRCRT*SPNVES
Trigger: ACTCTCCACATTTGGGGATCAGGTCCGGCACCTGCT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTCTCCTTGTTTCTCTaGTCGCTCCACCGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVSLFL*SLHRSR
Trigger: CCGGCTCCGGTGGAGCGATCAGAGAAACAAGGAGAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGATCTTGTCCTCGGTaGGCACAGTTCGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGSCPR*AQFAHQ
Trigger: CTGATGGGCGAACTGTGCGCACCGAGGACAAGATCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCATCTCGGCGGAAGTGTaGATGGGGCTTGTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVISAEV*MGLVFE
Trigger: CTCAAAGACAAGCCCCATGCACACTTCCGCCGAGAT...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCAGAACCTCCAGCTCTaGAGGTGTAGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGQNLQL*RCRQGS
Trigger: GCTGCCCTGCCTACACCTGCAGAGCTGGAGGTTCTG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCAGGCCCCATTCCCTaGCCTCCACCCTTGAACACT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSGPIP*PPPLNT
Trigger: AGTGTTCAAGGGTGGAGGGCAGGGAATGGGGCCTGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATTGGTGGGGAATAGCTaGCACCTGACCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLVGNS*HLTPKP
Trigger: GGGCTTTGGGGTCAGGTGGCAGCTATTCCCCACCAA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCACCTGCTCTCAGGTaGAGCAGTGTCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPPALR*SSVWLA
Trigger: AGCCAGCCAGACACTGCTGCACCTGAGAGCAGGTGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCAAGATCGCATCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPRSHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGATGCGATCTTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCTCGTTGGCCCCCGATaGGATCCCAAGAATCTTGTA +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVLVGPR*DPKNLV
Trigger: TACAAGATTCTTGGGATCCCATCGGGGGCCAACGAG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGAAGGCTGGTAGATaGGCCCTGTCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMKAGR*ALSPTS
Trigger: AGAGGTGGGGGACAGGGCCCATCTACCAGCCTTCAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGAGGTGCAGCAGTGTCTaGCTGGCTGTGAGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGRCSSV*LAVSGC
Trigger: ACAGCCGCTCACAGCCAGCCAGACACTGCTGCACCT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATTCTCCCCAGGAGTGTaGGAAGCTCCGGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGFSPGV*EAPESS
Trigger: GGAGCTTTCCGGAGCTTCCCACACTCCTGGGGAGAA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453597.8
ENST00000454002.6
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCCGGTAGGCTTTCTTaGTCTCATCCTCGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSGRLS*SHPRWP
Trigger: GGGCCAACGAGGATGAGATCAAGAAAGCCTACCGGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCCTACTCAGCCCATTaGAGCCAAAACGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPYSAH*SQNGRK
Trigger: CTTTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGAGGTCTCCTCGCTaGGTTGGCACTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMRSPR*VGTLGK
Trigger: CTTCCCCAAAGTGCCAACTCAGCGAGGAGACCTCAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGAATAGCTGCCACCTaGCCCCAAAGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGIAAT*PQSPFP
Trigger: AGGGAAAGGGCTTTGGGGTCAGGTGGCAGCTATTCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGAEWSG*WQRRYR
Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGCRARW*HLGGSV
Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTCAGGCCCCATTCCCTaGCCTCCACCCTTGAACACT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSGPIP*PPPLNT
Trigger: AGTGTTCAAGGGTGGAGGGCAGGGAATGGGGCCTGA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTTGGTGGGGAATAGCTaGCACCTGACCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLVGNS*HLTPKP
Trigger: GGGCTTTGGGGTCAGGTGGCAGCTATTCCCCACCAA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCACAGGCCCCGTTTCTTaGGGTCACTTAGCACATCAT +
Preference number: 4 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVTGPVS*GHLAHH
Trigger: ATGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGT...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCTTCCTCCCCATACTaGTCATACAGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPSSPY*SYRPRF
Trigger: GAAACGGGGCCTGTATGACCAGTATGGGGAGGAAGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAGAAGGAGGCAAAGGTaGCATGGGGGTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRRRQR*HGGPHE
Trigger: TTCATGGGGACCCCCATGCCACCTTTGCCTCCTTCT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGATGTTGTCAGGTGTaGCGTCGCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGCCQV*RRLLWG
Trigger: TCCCCAAAGAAGGCGACGCCACACCTGACAACATCC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRRKCA*GLSLST
Trigger: TGTGCTCAAAGACAAGCCCCATGCACACTTCCGCCG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGHCRAR*CHLGGS
Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTCTCCTCGCTGAGTTaGCACTTTGGGGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVSSLS*HFGEGK
Trigger: CTTCCCTTCCCCAAAGTGCCAACTCAGCGAGGAGAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTTGCCAGTGTCCAGTaGACATCAAGCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVASVQ*TSSWVH
Trigger: GTGCACCCAGCTTGATGTCCACTGGACACTGGCAAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGAACATTGACCCCTaGCCTGGGCTAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMNIDP*PGLALP
Trigger: GGGGAGAGCTAGCCCAGGCCAGGGGTCAATGTTCAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGAAGGCTGGTAGATaGGCCCTGTCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMKAGR*ALSPTS
Trigger: AGAGGTGGGGGACAGGGCCCATCTACCAGCCTTCAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATGGGATTTGGAAGTTTaGGGGTGGCTAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGWDLEV*GWLGPE
Trigger: CTCAGGGCCTAGCCACCCCCAAACTTCCAAATCCCA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCCTACTCAGCCCATTaGAGCCAAAACGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPYSAH*SQNGRK
Trigger: CTTTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGAGGTCTCCTCGCTaGGTTGGCACTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMRSPR*VGTLGK
Trigger: CTTCCCCAAAGTGCCAACTCAGCGAGGAGACCTCAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGCAAGCGTGTGTTTGTaGGTGGCAGCGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGASVCL*VAACIP
Trigger: AGGTATACACGCTGCCACTCACAAACACACGCTTGC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGAEWSG*WQRRYR
Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATCTCGGCGGAAGTGTaGATGGGGCTTGTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGISAEV*MGLVFE
Trigger: CTCAAAGACAAGCCCCATGCACACTTCCGCCGAGAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGCRARW*HLGGSV
Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCACTGGACCAGCACTaGTCTCCTTGTTTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPLDQH*SPCFGE
Trigger: CTCACCGAAACAAGGAGACCAGTGCTGGTCCAGTGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312316.9
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTCCCATCACAGCCACTaGACCAGCACTGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSHHSH*TSTGLL
Trigger: AAGGAGACCAGTGCTGGTCCAGTGGCTGTGATGGGA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACTCGTTGGCCCCCGATaGGATCCCAAGAATCTTGTA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLVGPR*DPKNLV
Trigger: TACAAGATTCTTGGGATCCCATCGGGGGCCAACGAG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCTTCCTCCCCATACTaGTCATACAGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPSSPY*SYRPRF
Trigger: GAAACGGGGCCTGTATGACCAGTATGGGGAGGAAGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGAGAAGGAGGCAAAGGTaGCATGGGGGTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGRRRQR*HGGPHE
Trigger: TTCATGGGGACCCCCATGCCACCTTTGCCTCCTTCT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGEWSGC*QRRYRR
Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGATGTTGTCAGGTGTaGCGTCGCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGCCQV*RRLLWG
Trigger: TCCCCAAAGAAGGCGACGCCACACCTGACAACATCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGRRKCA*GLSLST
Trigger: TGTGCTCAAAGACAAGCCCCATGCACACTTCCGCCG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTCTCCTCGCTGAGTTaGCACTTTGGGGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVSSLS*HFGEGK
Trigger: CTTCCCTTCCCCAAAGTGCCAACTCAGCGAGGAGAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTTGCCAGTGTCCAGTaGACATCAAGCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVASVQ*TSSWVH
Trigger: GTGCACCCAGCTTGATGTCCACTGGACACTGGCAAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGGGATTTGGAAGTTTaGGGGTGGCTAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGWDLEV*GWLGPE
Trigger: CTCAGGGCCTAGCCACCCCCAAACTTCCAAATCCCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATACAACTATGGGGGTaGGGTGGGATCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGIQLWG*GGITQA
Trigger: TGCCTGTGTGATCCCACCCCACCCCCATAGTTGTAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGCAAGCGTGTGTTTGTaGGTGGCAGCGTGTATACCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGASVCL*VAACIP
Trigger: AGGTATACACGCTGCCACTCACAAACACACGCTTGC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGAGCTTCAGCTTATACTaGGGGCCTGCTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSFSLY*GPAWAS
Trigger: AGAAGCCCAAGCAGGCCCTCAGTATAAGCTGAAGCT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACGCTTGATGACTATGTaGAGGATCTTGTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRLMTM*RILSSV
Trigger: CACCGAGGACAAGATCCTGCACATAGTCATCAAGCG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATCTCGGCGGAAGTGTaGATGGGGCTTGTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGISAEV*MGLVFE
Trigger: CTCAAAGACAAGCCCCATGCACACTTCCGCCGAGAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGAGTGTTGGGGGTATTaGTGTGGTAGGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGECWGY*CGRLWT
Trigger: AGTCCAGAGCCTACCACAGCAATACCCCCAACACTC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGAGGGGAGGAGGACATaGTATGTACAGGCATGGATA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGEGRRT*YVQAWI
Trigger: TATCCATGCCTGTACATAGCATGTCCTCCTCCCCTC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTCGTTGGCCCCCGATaGGATCCCAAGAATCTTGTA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLVGPR*DPKNLV
Trigger: TACAAGATTCTTGGGATCCCATCGGGGGCCAACGAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAACAGGCCCCGTTTCTTaGGGTCACTTAGCACATCAT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGTGPVS*GHLAHH
Trigger: ATGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAGATATCGAAGGGGTTaGAGCCACCAAAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGRYRRG*SHQRRR
Trigger: CCTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGEWSGC*QRRYRR
Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGAGTGGAGTGAGTGTTaGGGGTATTGCTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGEWSEC*GYCCGR
Trigger: CCTACCACAGCAATACCCCCAACACTCACTCCACTC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAACTATGGGGGTGGGGTaGGATCACACAGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGTMGVG*DHTGIK
Trigger: TTTTATGCCTGTGTGATCCCACCCCACCCCCATAGT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATACAACTATGGGGGTaGGGTGGGATCACACAGGCA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGIQLWG*GGITQA
Trigger: TGCCTGTGTGATCCCACCCCACCCCCATAGTTGTAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCTGATCCCCAAATGTaGAGAGTGAAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPDPQM*RVKGED
Trigger: GTCTTCTCCCTTCACTCTCCACATTTGGGGATCAGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCACTGGACCAGCACTaGTCTCCTTGTTTCGAAACT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPLDQH*SPCFET
Trigger: AGTTTCGAAACAAGGAGACCAGTGCTGGTCCAGTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453597.8
ENST00000454002.6
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAACAGACAGCTCTAGGTaGGTGCTTCTTGTGCATGAA +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGTDSSR*VLLVHE
Trigger: TTCATGCACAAGAAGCACTCACCTAGAGCTGTCTGT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCGCTTGATGACTATGTaGAGGATCTTGTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGRLMTM*RILSSV
Trigger: CACCGAGGACAAGATCCTGCACATAGTCATCAAGCG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGACATCAAGCTGGGTaGACATTGAGTGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGHQAG*TLSGVS
Trigger: ACTCACTCCACTCAATGTGCACCCAGCTTGATGTCC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGAGGGGAGGAGGACATaGTATGTACAGGCATGGATA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGEGRRT*YVQAWI
Trigger: TATCCATGCCTGTACATAGCATGTCCTCCTCCCCTC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCATCCCAGGTTTGTTaGTCCTGCTCAGATGCCATA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPSQVC*SCSDAI
Trigger: TATGGCATCTGAGCAGGAGCAACAAACCTGGGATGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTTATACTGAGGGCCTaGTTGGGCTTCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLILRA*LGFSKV
Trigger: CACCTTTGAGAAGCCCAAGCAGGCCCTCAGTATAAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACAGGCCCCGTTTCTTaGGGTCACTTAGCACATCAT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTGPVS*GHLAHH
Trigger: ATGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGGGTGCACATTGAGTaGAGTGAGTGTTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGWVHIE*SECWGY
Trigger: ATACCCCCAACACTCACTCCACTCAATGTGCACCCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCAGTGGACATCAAGCTaGGTGCACATTGAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGQWTSS*VHIEWS
Trigger: ACTCCACTCAATGTGCACCCAGCTTGATGTCCACTG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACTATGGGGGTGGGGTaGGATCACACAGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTMGVG*DHTGIK
Trigger: TTTTATGCCTGTGTGATCCCACCCCACCCCCATAGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCTGATCCCCAAATGTaGAGAGTGAAGGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPDPQM*RVKGED
Trigger: GTCTTCTCCCTTCACTCTCCACATTTGGGGATCAGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
3UTR CAA 72 bp TTGCCAGTGTCCAGTGGACATCAAGCTGGGTGCACATaGAGTGGAGTGAGTGTTGGGGGTATTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LPVSSGHQAGCT*SGVSVGGIAVV
Trigger: TACCACAGCAATACCCCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACAGACAGCTCTAGGTaGGTGCTTCTTGTGCATGAA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTDSSR*VLLVHE
Trigger: TTCATGCACAAGAAGCACTCACCTAGAGCTGTCTGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCTGTTCACAGGTTGTaGACTTTCCCTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPVHRL*TFPSYP
Trigger: AGGATAAGAAGGGAAAGTTCACAACCTGTGAACAGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGAACAGGGTAGGTGCTaGTTAAGGATCTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGEQGRC*LRICLV
Trigger: GACAAGACAGATCCTTAAGCAGCACCTACCCTGTTC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTCACTCTCCAGCCACTaGAGTGGAAACTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSLSSH*SGNWIE
Trigger: TTCAATCCAGTTTCCACTGCAGTGGCTGGAGAGTGA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGAAAAGTGTCTCGTaGTCAAGTCCCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMKSVS*SSPCSQ
Trigger: CTGTGAACAGGGACTTGAGCACGAGACACTTTTCAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAGTGCTTCTTGTGCATaGATATGTGTGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSASCA*ICVPLP
Trigger: AGGTAATGGCACACATATTCATGCACAAGAAGCACT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCTGTTCACAGGTTGTaGACTTTCCCTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPVHRL*TFPSYP
Trigger: AGGATAAGAAGGGAAAGTTCACAACCTGTGAACAGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCAGCTTCTTCACTATaGCCTTTATACAACTATGGG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPASSL*PLYNYG
Trigger: CCCATAGTTGTATAAAGGTCATAGTGAAGAAGCTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTGCATGAATATGTGTaGCATTACCTTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVHEYV*HYLGHC
Trigger: ACAGTGTCCAAGGTAATGGCACACATATTCATGCAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAACAGCTCTAGGTGAGTaGTTCTTGTGCATGAATATG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGTALGE*FLCMNM
Trigger: CATATTCATGCACAAGAAGCACTCACCTAGAGCTGT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGAAAAGTGTCTCGTaGTCAAGTCCCTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMKSVS*SSPCSQ
Trigger: CTGTGAACAGGGACTTGAGCACGAGACACTTTTCAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
3UTR CAA 72 bp TCAGGTCACTCTCCAGCCACTGCAGTGGAAACTGGATaGAAAGCTAGTGACATGAACATTGACCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SGHSPATAVETG*KASDMNIDPWP
Trigger: AGGCCAGGGGTCAATGTTCATGTCACTAGCTTTCAATCCAGTTTCCACTGCAGTGGCTGGAGAGTGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGAGTGCTTCTTGTGCATaGATATGTGTGCCATTACCT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSASCA*ICVPLP
Trigger: AGGTAATGGCACACATATTCATGCACAAGAAGCACT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCAGCTTCTTCACTATaGCCTTTATACAACTATGGG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPASSL*PLYNYG
Trigger: CCCATAGTTGTATAAAGGTCATAGTGAAGAAGCTGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATTTAAGGGCTCCAGCTaGATTTTAAACATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGFKGSS*ILNIKL
Trigger: CAGCTTGATGTTTAAAATTCAGCTGGAGCCCTTAAA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453597.8
ENST00000454002.6
CDS-3UTR TCA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTTTCTTCTAATAGCTaGGTGGTACTTTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVSSNS*VVLSVC
Trigger: ACAGACAGAAAGTACCACTCAGCTATTAGAAGAAAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTGCATGAATATGTGTaGCATTACCTTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVHEYV*HYLGHC
Trigger: ACAGTGTCCAAGGTAATGGCACACATATTCATGCAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACAGCTCTAGGTGAGTaGTTCTTGTGCATGAATATG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTALGE*FLCMNM
Trigger: CATATTCATGCACAAGAAGCACTCACCTAGAGCTGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR TCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTTTAAGGGCTCCAGCTaGATTTTAAACATCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGFKGSS*ILNIKL
Trigger: CAGCTTGATGTTTAAAATTCAGCTGGAGCCCTTAAA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453597.8
ENST00000454002.6
CDS-3UTR GCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCATTTTAGAAAAAGTTaGCAGTGTCCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGHFRKS*QCPVDI
Trigger: GATGTCCACTGGACACTGGCAACTTTTTCTAAAATG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CCA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTGCTATGTACAGGCATaGATAAGGAATCTCTACATA +
Preference number: 4 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGCYVQA*IRNLYI
Trigger: TATGTAGAGATTCCTTATCCATGCCTGTACATAGCA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS GCA 90 bp GTGCTGCAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGGCGCGTaGCCAGCAAGGCCTGTCTGGCGCAGCAGGTGCCGGACCGGTGAG +
Preference number: 5 (lower is better)
Translates to: VLQLWKPPPWTLRGA*PARPVWRSRCRTGE
Trigger: CTCACCGGTCCGGCACCTGCTGCGCCAGACAGGCCTTGCTGGGCACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537321.5
ENST00000682809.1
ENST00000684748.1
CDS CCA 90 bp CACCGGAGCCGGCCTGAAGTGCTGCAGCTCTGGAAGCCACCTCCTTaGACTCTCAGAGGCGCGTGCCCAGCAAGGCCTGTCTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: HRSRPEVLQLWKPPP*TLRGACPARPVWRS
Trigger: GCTGCGCCAGACAGGCCTTGCTGGGCACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000454002.6
ENST00000458263.6
ENST00000537321.5
ENST00000541010.5
ENST00000545841.5
ENST00000682809.1
ENST00000684748.1
CDS TCA 90 bp GCCCAGCCAAGCCCCTCACCTCTGATCGCTCCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: AQPSPSPLIAPPEPA*SAAALEATSLDSQR
Trigger: CCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGGTGAGGGGCTTGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454002.6
ENST00000541010.5
ENST00000682809.1
CDS GCA 90 bp AAGCCCCTCACCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGGCGCGTGCC +
Preference number: 5 (lower is better)
Translates to: KPLTSDRSTGAGLKC*SSGSHLLGLSEARA
Trigger: GGCACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGGTGAGGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454002.6
ENST00000541010.5
ENST00000682809.1
CDS GCA 90 bp AAGGGCTCCAGCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGGCGCGTGCC +
Preference number: 5 (lower is better)
Translates to: KGSSSDRSTGAGLKC*SSGSHLLGLSEARA
Trigger: GGCACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGCTGGAGCCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684748.1
CDS CCA 90 bp GTGGCCCAGGACCGGGAACAGGCCTGGGTCTTCCGCCAGCTGTCCTaGCCAGCCAGACTGAGTCAGGGAATGGGTGTCTGGAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VAQDREQAWVFRQLS*PARLSQGMGVWSPV
Trigger: GACAGGACTCCAGACACCCATTCCCTGACTCAGTCTGGCTGGCCAGGACAGCTGGCGGAAGACCCAGGCCTGTTCCCGGTCCTGGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 90 bp AGGCAGAGGGCCAGTGGAACGGCTCACCAACCACCCACCTCCTTTTaGTGTCCCTGCATTACCTCCACACCCGGCCAGCTTCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RQRASGTAHQPPTSF*CPCITSTPGQLPPW
Trigger: CCAGGGAGGAAGCTGGCCGGGTGTGGAGGTAATGCAGGGACACCAAAAGGAGGTGGGTGGTTGGTGAGCCGTTCCACTGGCCCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 90 bp GGAGGAAGCAGGAAGGCAATGGAGGGGATGGCCGCGTGGAGGGTTTaGCTGGGTATGGGTGTGAGTGCCCTTCTCCGGAGGGACTTACCG +
Preference number: 5 (lower is better)
Translates to: GGSRKAMEGMAAWRV*LGMGVSALLRRDLP
Trigger: CGGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCCATTGCCTTCCTGCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 90 bp CACACACAGGAGCTGGCGAAGGTCAGTGTAACGGGTGAGGTCACCTaGGCATCGTGGTCTCCTACGCCACGCCTCAGGCATGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HTQELAKVSVTGEVT*ASWSPTPRLRHGAQ
Trigger: CTGGGCACCATGCCTGAGGCGTGGCGTAGGAGACCACGATGCTCAGGTGACCTCACCCGTTACACTGACCTTCGCCAGCTCCTGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 90 bp CTGAGCGACCCACACACAGGAGCTGGCGAAGGTCAGTGTAACGGGTaGGGTCACCTGAGCATCGTGGTCTCCTACGCCACGCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: LSDPHTGAGEGQCNG*GHLSIVVSYATPQA
Trigger: TGCCTGAGGCGTGGCGTAGGAGACCACGATGCTCAGGTGACCTCACCCGTTACACTGACCTTCGCCAGCTCCTGTGTGTGGGTCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 90 bp TCTCCTTGTTTCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGGCGCGTGCC +
Preference number: 5 (lower is better)
Translates to: SPCFSDRSTGAGLKC*SSGSHLLGLSEARA
Trigger: GGCACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGAAACAAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458263.6
ENST00000537321.5
ENST00000545841.5
CDS CCA 90 bp AGGTGGCATGGGGGTCCCCATGAAAGGTGTAGTGAAAGGAGCCACTaGAGCCACCTGATGTGCCACCGCCGGTCTTCAGGCCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RWHGGPHERCSERSH*SHLMCHRRSSGLPP
Trigger: GGGAGGAAGGCCTGAAGACCGGCGGTGGCACATCAGGTGGCTCCAGTGGCTCCTTTCACTACACCTTTCATGGGGACCCCCATGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000312316.9
ENST00000443266.2
ENST00000453597.8
ENST00000454002.6
ENST00000537321.5
ENST00000539059.1
ENST00000541010.5
ENST00000545841.5
ENST00000682809.1
ENST00000684748.1
CDS-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCCACACAGCGCCTCCTaGAGGCTGATCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVPHSAS*RLIRAL
Trigger: CAGTGCCCTGATCAGCCTCAAGGAGGCGCTGTGTGG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS CCA 90 bp AGGGTGCCCCTAGAGAACGAGAGCAGCTTCCAGGCAGAGGGCCAGTaGAACGGCTCACCAACCACCCACCTCCTTTTGGTGTCCCTGCAT +
Preference number: 5 (lower is better)
Translates to: RVPLENESSFQAEGQ*NGSPTTHLLLVSLH
Trigger: ATGCAGGGACACCAAAAGGAGGTGGGTGGTTGGTGAGCCGTTCCACTGGCCCTCTGCCTGGAAGCTGCTCTCGTTCTCTAGGGGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 90 bp AGCACTGGTCTCCTTGTTTCTCTGATCGCTCCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: STGLLVSLIAPPEPA*SAAALEATSLDSQR
Trigger: CCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGAAACAAGGAGACCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458263.6
ENST00000537321.5
ENST00000545841.5
CDS TCA 90 bp GAAGTTTTAAGGGCTCCAGCTCTGATCGCTCCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: EVLRAPALIAPPEPA*SAAALEATSLDSQR
Trigger: CCTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGCTGGAGCCCTTAAAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684748.1
CDS-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCTTGATCTCATCCTCGTaGGCCCCCGATGGGATCCCA +
Preference number: 5 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVLISSS*APDGIP
Trigger: TGGGATCCCATCGGGGGCCAACGAGGATGAGATCAA...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCACACAGCGCCTCCTaGAGGCTGATCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPHSAS*RLIRAL
Trigger: CAGTGCCCTGATCAGCCTCAAGGAGGCGCTGTGTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCCTGCCCTCCACCCTaGAACACTCCTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPCPPP*NTPESS
Trigger: GCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS TCA 90 bp AGCAGTGTCTGGCTGGCTGTGAGCGGCTGTATGGCAGCGTGTCAGTaGGGCTGGGAGTGCAAGCGTGTGTTTGTGAGTGGCAGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: SSVWLAVSGCMAACQ*GWECKRVFVSGSVY
Trigger: ATACACGCTGCCACTCACAAACACACGCTTGCACTCCCAGCCTCACTGACACGCTGCCATACAGCCGCTCACAGCCAGCCAGACACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454002.6
ENST00000458263.6
ENST00000541010.5
ENST00000545841.5
CDS-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCCCCCTACTCAGCCCATaGAAGCCAAAACGGCCGAAA +
Preference number: 5 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVPLLSP*KPKRPK
Trigger: TTTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGGG...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTTCGCCCATCAGGGTaGAGGCGACGCCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVRPSG*RRRLVI
Trigger: GATCACAAGGCGTCGCCTCAACCCTGATGGGCGAAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCCTGCCCTCCACCCTaGAACACTCCTGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPCPPP*NTPESS
Trigger: GCTGCTCTCAGGAGTGTTCAAGGGTGGAGGGCAGGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTGGAAGCCACCTCCTaGGACTCTCAGAGGCGCGTG +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLEATS*DSQRRV
Trigger: CACGCGCCTCTGAGAGTCCAAGGAGGTGGCTTCCAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCTCCGCGCCGCCCATaGAACCGTCTTCCTGTCACT +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPPRRP*NRLPVT
Trigger: AGTGACAGGAAGACGGTTCAATGGGCGGCGCGGAGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS TCA 90 bp GCTAGAGCTCTCTGGGGGATGGCCAGAAGCCATTCTCAGCCCTTCTaGGACTTGGCCAACCCCTGCCAAAGCCAGGAGAACCAGAGTCTT +
Preference number: 5 (lower is better)
Translates to: ARALWGMARSHSQPF*DLANPCQSQENQSL
Trigger: AAGACTCTGGTTCTCCTGGCTTTGGCAGGGGTTGGCCAAGTCTCAGAAGGGCTGAGAATGGCTTCTGGCCATCCCCCAGAGAGCTCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 90 bp CTCCCTGGTACCCACCTGCTAGCTGCTCTAGGCCCATACATCTCTTaGCTCCGCAGACACAGGGCAAGCTCTTTCAGGATCTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPGTHLLAALGPYIS*LRRHRASSFRICLL
Trigger: AAGGAGGCAGATCCTGAAAGAGCTTGCCCTGTGTCTGCGGAGGCAAGAGATGTATGGGCCTAGAGCAGCTAGCAGGTGGGTACCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 90 bp TTTTGGTGTCCCTGCATTACCTCCACACCCGGCCAGCTTCCTCCCTaGTACCCACCTGCTAGCTGCTCTAGGCCCATACATCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: FWCPCITSTPGQLPP*YPPASCSRPIHLLP
Trigger: AGGCAAGAGATGTATGGGCCTAGAGCAGCTAGCAGGTGGGTACCAGGGAGGAAGCTGGCCGGGTGTGGAGGTAATGCAGGGACACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATTGATCTCATCCTCGTaGGCCCCCGATGGGATCCCA +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLISSS*APDGIP
Trigger: TGGGATCCCATCGGGGGCCAACGAGGATGAGATCAA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCTACAGGCCCCGTTTCTaGGGGTCACTTAGCACATCA +
Preference number: 5 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVYRPRF*GSLSTS
Trigger: TGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGTA...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATGTCAGCAGGGATGTaGTCAGGTGTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGMSAGM*SGVASP
Trigger: AGGCGACGCCACACCTGACAACATCCCTGCTGACAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGGTCTCCTCGCTGAGTaGGCACTTTGGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGGLLAE*ALWGRE
Trigger: TTCCCTTCCCCAAAGTGCCAACTCAGCGAGGAGACC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS TCA 90 bp CAATGGAGGGGATGGCCGCGTGGAGGGTTTGACTGGGTATGGGTGTaGGTGCCCTTCTCCGGAGGGACTTACCGAAACTTTACAAACCCA +
Preference number: 5 (lower is better)
Translates to: QWRGWPRGGFDWVWV*VPFSGGTYRNFTNP
Trigger: TGGGTTTGTAAAGTTTCGGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 90 bp GGAGGGGATGGCCGCGTGGAGGGTTTGACTGGGTATGGGTGTGAGTaGCCTTCTCCGGAGGGACTTACCGAAACTTTACAAACCCATTCA +
Preference number: 5 (lower is better)
Translates to: GGDGRVEGLTGYGCE*PSPEGLTETLQTHS
Trigger: TGAATGGGTTTGTAAAGTTTCGGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGATGTCAGCAGGGATGTaGTCAGGTGTGGCGTCGCCT +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGMSAGM*SGVASP
Trigger: AGGCGACGCCACACCTGACAACATCCCTGCTGACAT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGGTCTCCTCGCTGAGTaGGCACTTTGGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGGLLAE*ALWGRE
Trigger: TTCCCTTCCCCAAAGTGCCAACTCAGCGAGGAGACC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAGTGACCCTGAATCTCTaGGTGGGGAATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGVTLNL*VGNSCH
Trigger: GTGGCAGCTATTCCCCACCAAGAGATTCAGGGTCAC...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCCATCCCAGGTTTGTaGCTCCTGCTCAGATGCCAT +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPIPGL*LLLRCH
Trigger: ATGGCATCTGAGCAGGAGCAACAAACCTGGGATGGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACCCCCATCCCAGGTTaGTTGCTCCTGCTCAGATGC +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTPIPG*LLLLRC
Trigger: GCATCTGAGCAGGAGCAACAAACCTGGGATGGGGGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAATACTGAGGGCCTGCTaGGGCTTCTCAAAGGTGACC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGILRAC*GFSKVT
Trigger: GGTCACCTTTGAGAAGCCCAAGCAGGCCCTCAGTAT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATACAGGCCCCGTTTCTaGGGGTCACTTAGCACATCA +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGYRPRF*GSLSTS
Trigger: TGATGTGCTAAGTGACCCCAAGAAACGGGGCCTGTA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCCCCTACTCAGCCCATaGAAGCCAAAACGGCCGAAA +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGPLLSP*KPKRPK
Trigger: TTTCGGCCGTTTTGGCTTCAATGGGCTGAGTAGGGG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCAAGCTGGGTGCACATaGAGTGGAGTGAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGQAGCT*SGVSVG
Trigger: CCCAACACTCACTCCACTCAATGTGCACCCAGCTTG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGGTGACCCTGAATCTCTaGGTGGGGAATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGVTLNL*VGNSCH
Trigger: GTGGCAGCTATTCCCCACCAAGAGATTCAGGGTCAC...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGAAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGKISKG*EPPKKE
Trigger: CTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGACTATGTGCAGGATCTaGTCCTCGGTGCGCACAGTT +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGTMCRI*SSVRTV
Trigger: AACTGTGCGCACCGAGGACAAGATCCTGCACATAGT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGCACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTGCATGGGGCTTGTCTTGGGTTCTTTATTCTaGTCTGGGTGGTACTTCAAG +
Preference number: 5 (lower is better)
Translates to: GTVEHVGAISAEVCMGLVLGSLF*SGWYFK
Trigger: CTTGAAGTACCACCCAGACAAGAATAAAGAACCCAA...GACAAGCCCCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469798.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGKISKG*EPPKKE
Trigger: CTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACTAGGTGAGTGCTTCTaGTGCATGAATATGTGTGCC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLGECF*CMNMCA
Trigger: GGCACACATATTCATGCACAAGAAGCACTCACCTAG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATCTGGGAAGCGAACTTaGAACTCAACAATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGSGKRT*NSTMRS
Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGCTTCCCAGA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGCTAGGTGAGTGCTTCTaGTGCATGAATATGTGTGCC +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLGECF*CMNMCA
Trigger: GGCACACATATTCATGCACAAGAAGCACTCACCTAG...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGACCAGCACTGGTCTCCTaGTTTCGAAACTTTACAAAC +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGPALVS*FRNFTN
Trigger: GTTTGTAAAGTTTCGAAACAAGGAGACCAGTGCTGG...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453597.8
ENST00000454002.6
CDS-3UTR CAA 90 bp GGAAGCCAAAGGGAAGGGAGGGGACTGGTATTAGCAAAGCTGAGGGGAGGAGGATTGGGTTCTTTATTCTaGTCTGGGTGGTACTTCAAG +
Preference number: 5 (lower is better)
Translates to: GSQREGRGLVLAKLRGGGLGSLF*SGWYFK
Trigger: CTTGAAGTACCACCCAGACAAGAATAAAGAACCCAA...TCCTCCTCCCCTCAGCTTTGCTAATACCAGTCCCCTCCCTTCCCTTTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTCTGGGAAGCGAACTTaGAACTCAACAATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGSGKRT*NSTMRS
Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGCTTCCCAGA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS-3UTR CAA 90 bp CCAGTGTCCAGTGGACATCAAGCTGGGTGCACATTGAGTGGAGTGAGTGTTGGGTTGGGTTCTTTATTCTaGTCTGGGTGGTACTTCAAG +
Preference number: 5 (lower is better)
Translates to: PVSSGHQAGCTLSGVSVGLGSLF*SGWYFK
Trigger: CTTGAAGTACCACCCAGACAAGAATAAAGAACCCAA...CCCAACACTCACTCCACTCAATGTGCACCCAGCTTGATGTCCACTGGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312316.9
ENST00000453597.8
ENST00000454002.6
ENST00000545841.5
CDS TCA 90 bp ACCCTGTGGTTTAGGATCCGGCCCATCATCAGACCCATATTCCTCTaGGTCCCTTTTAAGGTGGGTGCAGGAGCATTTGTTATAAGAGAA +
Preference number: 5 (lower is better)
Translates to: TLWFRIRPIIRPIFL*VPFKVGAGAFVIRE
Trigger: TTCTCTTATAACAAATGCTCCTGCACCCACCTTAAAAGGGACTCAGAGGAATATGGGTCTGATGATGGGCCGGATCCTAAACCACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 72 bp AGGTGCCGGACCGGTGAGGAGCTGCGGGCGCCGCCGTaGTCCGTGAGACAGCCGCTGCCCCCTCCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: RCRTGEELRAPP*SVRQPLPPPPA
Trigger: AGCCGGGGGAGGGGGCAGCGGCTGTCTCACGGACCACGGCGGCGCCCGCAGCTCCTCACCGGTCCGGCACCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537321.5
ENST00000682809.1
CDS CCA 72 bp AGCGTGTATACCGGTGAGGAGCTGCGGGCGCCGCCGTaGTCCGTGAGACAGCCGCTGCCCCCTCCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: SVYTGEELRAPP*SVRQPLPPPPA
Trigger: AGCCGGGGGAGGGGGCAGCGGCTGTCTCACGGACCACGGCGGCGCCCGCAGCTCCTCACCGGTATACACGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458263.6
CDS CCA 72 bp TCTCCTTGTTTCGGTGAGGAGCTGCGGGCGCCGCCGTaGTCCGTGAGACAGCCGCTGCCCCCTCCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: SPCFGEELRAPP*SVRQPLPPPPA
Trigger: AGCCGGGGGAGGGGGCAGCGGCTGTCTCACGGACCACGGCGGCGCCCGCAGCTCCTCACCGAAACAAGGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312316.9
ENST00000469798.5
CDS GCA 72 bp CAGGAGTGTGGGAAGCTCCGGAAAGCTCCTCGGGCCTaGAGTGGGGGTGCTGCGGTGAGGAGCTGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: QECGKLRKAPRA*SGGAAVRSCGR
Trigger: GCGCCCGCAGCTCCTCACCGCAGCACCCCCACTGCAGGCCCGAGGAGCTTTCCGGAGCTTCCCACACTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453597.8
CDS CCA 72 bp GCAGCTGGGGCAGTGGCCCAGGACCGGGAACAGGCCTaGGTCTTCCGCCAGCTGTCCTGGCCAGCCAGACTG +
Preference number: 6 (lower is better)
Translates to: AAGAVAQDREQA*VFRQLSWPARL
Trigger: CAGTCTGGCTGGCCAGGACAGCTGGCGGAAGACCCAGGCCTGTTCCCGGTCCTGGGCCACTGCCCCAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 72 bp GACCCGCGGCCACCTGCTCTCAGGTGCAGCAGTGTCTaGCTGGCTGTGAGCGGCTGTATGGCAGCGTGTCAG +
Preference number: 6 (lower is better)
Translates to: DPRPPALRCSSV*LAVSGCMAACQ
Trigger: CTGACACGCTGCCATACAGCCGCTCACAGCCAGCCAGACACTGCTGCACCTGAGAGCAGGTGGCCGCGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454002.6
ENST00000458263.6
ENST00000541010.5
ENST00000545841.5
CDS TCA 72 bp AGGGCTCCAGCTCTGATCGCTCCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAAGCCACCTCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: RAPALIAPPEPA*SAAALEATSLD
Trigger: GTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGCTGGAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684748.1
CDS CCA 72 bp GACCGGGAACAGGCCTGGGTCTTCCGCCAGCTGTCCTaGCCAGCCAGACTGAGTCAGGGAATGGGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: DREQAWVFRQLS*PARLSQGMGVW
Trigger: CCAGACACCCATTCCCTGACTCAGTCTGGCTGGCCAGGACAGCTGGCGGAAGACCCAGGCCTGTTCCCGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp GTGCGCTTAAACATGCCCAGCCAAGCCCCTCACCTCTaGTCGCTCCACCGGAGCCGGCCTGAAGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: VRLNMPSQAPHL*SLHRSRPEVLQ
Trigger: CTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGGTGAGGGGCTTGGCTGGGCATGTTTAAGCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454002.6
ENST00000541010.5
ENST00000682809.1
CDS TCA 72 bp CTGAGAGGCCCTGCTGAGCGAGGTGGCACCATGGACTaGGCGACCCACACACAGGAGCTGGCGAAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: LRGPAERGGTMD*ATHTQELAKVS
Trigger: ACTGACCTTCGCCAGCTCCTGTGTGTGGGTCGCTCAGTCCATGGTGCCACCTCGCTCAGCAGGGCCTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CAA 90 bp CAGGCAGAGGGCCAGTGGAACGGCTCACCAACCACCCACCTCCTTTaGGTGTCCCTGCATTACCTCCACACCCGGCCAGCTTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: QAEGQWNGSPTTHLL*VSLHYLHTRPASSL
Trigger: CAGGGAGGAAGCTGGCCGGGTGTGGAGGTAATGCAGGGACACCAAAAGGAGGTGGGTGGTTGGTGAGCCGTTCCACTGGCCCTCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp AGGAAGGCAATGGAGGGGATGGCCGCGTGGAGGGTTTaGCTGGGTATGGGTGTGAGTGCCCTTCTCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RKAMEGMAAWRV*LGMGVSALLRR
Trigger: CCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCCATTGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 72 bp ACCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: TSDRSTGAGLKC*SSGSHLLGLSE
Trigger: CTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454002.6
ENST00000541010.5
ENST00000682809.1
CDS GCA 72 bp AGCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SSDRSTGAGLKC*SSGSHLLGLSE
Trigger: CTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684748.1
CDS CAA 72 bp CAGGAAGGCAATGGAGGGGATGGCCGCGTGGAGGGTTaGACTGGGTATGGGTGTGAGTGCCCTTCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: QEGNGGDGRVEG*TGYGCECPSPE
Trigger: CTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCCATTGCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CAA 90 bp TGGAGGAAGCAGGAAGGCAATGGAGGGGATGGCCGCGTGGAGGGTTaGACTGGGTATGGGTGTGAGTGCCCTTCTCCGGAGGGACTTACC +
Preference number: 6 (lower is better)
Translates to: WRKQEGNGGDGRVEG*TGYGCECPSPEGLT
Trigger: GGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCCCCTCCATTGCCTTCCTGCTTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp TGGCTGGCTGTGAGCGGCTGTATGGCAGCGTGTCAGTaGGGCTGGGAGTGCAAGCGTGTGTTTGTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: WLAVSGCMAACQ*GWECKRVFVSG
Trigger: GCCACTCACAAACACACGCTTGCACTCCCAGCCTCACTGACACGCTGCCATACAGCCGCTCACAGCCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000454002.6
ENST00000458263.6
ENST00000541010.5
ENST00000545841.5
CDS TCA 72 bp CTCCTTGTTTCTCTGATCGCTCCACCGGAGCCGGCCTaGAGTGCTGCAGCTCTGGAAGCCACCTCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: LLVSLIAPPEPA*SAAALEATSLD
Trigger: GTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGAAACAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458263.6
ENST00000537321.5
ENST00000545841.5
CDS TCA 72 bp GAGCTGGCGAAGGTCAGTGTAACGGGTGAGGTCACCTaGGCATCGTGGTCTCCTACGCCACGCCTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: ELAKVSVTGEVT*ASWSPTPRLRH
Trigger: ATGCCTGAGGCGTGGCGTAGGAGACCACGATGCTCAGGTGACCTCACCCGTTACACTGACCTTCGCCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp CCACACACAGGAGCTGGCGAAGGTCAGTGTAACGGGTaGGGTCACCTGAGCATCGTGGTCTCCTACGCCACG +
Preference number: 6 (lower is better)
Translates to: PHTGAGEGQCNG*GHLSIVVSYAT
Trigger: CGTGGCGTAGGAGACCACGATGCTCAGGTGACCTCACCCGTTACACTGACCTTCGCCAGCTCCTGTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 72 bp TTCTCTGATCGCTCCACCGGAGCCGGCCTGAAGTGCTaGAGCTCTGGAAGCCACCTCCTTGGACTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: FSDRSTGAGLKC*SSGSHLLGLSE
Trigger: CTCTGAGAGTCCAAGGAGGTGGCTTCCAGAGCTGCAGCACTTCAGGCCGGCTCCGGTGGAGCGATCAGAGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458263.6
ENST00000537321.5
ENST00000545841.5
CDS CCA 72 bp CCCTGCATTACCTCCACACCCGGCCAGCTTCCTCCCTaGTACCCACCTGCTAGCTGCTCTAGGCCCATACAT +
Preference number: 6 (lower is better)
Translates to: PCITSTPGQLPP*YPPASCSRPIH
Trigger: ATGTATGGGCCTAGAGCAGCTAGCAGGTGGGTACCAGGGAGGAAGCTGGCCGGGTGTGGAGGTAATGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 72 bp GCCAGTGGAACGGCTCACCAACCACCCACCTCCTTTTaGTGTCCCTGCATTACCTCCACACCCGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: ASGTAHQPPTSF*CPCITSTPGQL
Trigger: AAGCTGGCCGGGTGTGGAGGTAATGCAGGGACACCAAAAGGAGGTGGGTGGTTGGTGAGCCGTTCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp CTCTGGGGGATGGCCAGAAGCCATTCTCAGCCCTTCTaGGACTTGGCCAACCCCTGCCAAAGCCAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LWGMARSHSQPF*DLANPCQSQEN
Trigger: GTTCTCCTGGCTTTGGCAGGGGTTGGCCAAGTCTCAGAAGGGCTGAGAATGGCTTCTGGCCATCCCCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CAA 90 bp CCTCCCTGGTACCCACCTGCTAGCTGCTCTAGGCCCATACATCTCTaGCCTCCGCAGACACAGGGCAAGCTCTTTCAGGATCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: PPWYPPASCSRPIHL*PPQTQGKLFQDLPP
Trigger: AGGAGGCAGATCCTGAAAGAGCTTGCCCTGTGTCTGCGGAGGCAAGAGATGTATGGGCCTAGAGCAGCTAGCAGGTGGGTACCAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp GGATGGCCGCGTGGAGGGTTTGACTGGGTATGGGTGTaGGTGCCCTTCTCCGGAGGGACTTACCGAAACTTT +
Preference number: 6 (lower is better)
Translates to: GWPRGGFDWVWV*VPFSGGTYRNF
Trigger: AAAGTTTCGGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp CGCCCCCACCCCTCTGACGATGCTAAGCCTCACGTGTaGCTCAGATCACAGGGTGACTCACAGCCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: RPHPSDDAKPHV*LRSQGDSQPLE
Trigger: TTCCAAAGGCTGTGAGTCACCCTGTGATCTGAGTCACACGTGAGGCTTAGCATCGTCAGAGGGGTGGGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CCA 72 bp TCTCCTAGCCTCACCCTACGCCCCCAGTCCACCCTGTaGTTTAGGATCCGGCCCATCATCAGACCCATATTC +
Preference number: 6 (lower is better)
Translates to: SPSLTLRPQSTL*FRIRPIIRPIF
Trigger: GAATATGGGTCTGATGATGGGCCGGATCCTAAACCACAGGGTGGACTGGGGGCGTAGGGTGAGGCTAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 72 bp GGCCGCGTGGAGGGTTTGACTGGGTATGGGTGTGAGTaGCCTTCTCCGGAGGGACTTACCGAAACTTTACAA +
Preference number: 6 (lower is better)
Translates to: GRVEGLTGYGCE*PSPEGLTETLQ
Trigger: TTGTAAAGTTTCGGTAAGTCCCTCCGGAGAAGGGCACTCACACCCATACCCAGTCAAACCCTCCACGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CAA 90 bp ACTGGTCTCCTTGTTTCTGCTAGCTGCTCTAGGCCCATACATCTCTaGCCTCCGCAGACACAGGGCAAGCTCTTTCAGGATCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: TGLLVSASCSRPIHL*PPQTQGKLFQDLPP
Trigger: AGGAGGCAGATCCTGAAAGAGCTTGCCCTGTGTCTGCGGAGGCAAGAGATGTATGGGCCTAGAGCAGCTAGCAGAAACAAGGAGACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539059.1
CDS CAA 90 bp GACACTATCCTTCCCCCAACCAGGGCAACAGTTCCCTTTACTCATTaGCCAGCGTCTACACACAAAACTGTGAGGGCTGTGCCGCCTAAG +
Preference number: 6 (lower is better)
Translates to: DTILPPTRATVPFTH*PASTHKTVRAVPPK
Trigger: CTTAGGCGGCACAGCCCTCACAGTTTTGTGTGTAGACGCTGGCAAATGAGTAAAGGGAACTGTTGCCCTGGTTGGGGGAAGGATAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS GCA 72 bp TTGTTTCTGCTAGCTGCTCTAGGCCCATACATCTCTTaGCTCCGCAGACACAGGGCAAGCTCTTTCAGGATC +
Preference number: 6 (lower is better)
Translates to: LFLLAALGPYIS*LRRHRASSFRI
Trigger: GATCCTGAAAGAGCTTGCCCTGTGTCTGCGGAGGCAAGAGATGTATGGGCCTAGAGCAGCTAGCAGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539059.1
CDS CCA 72 bp TTCTTCCATTCCAGTCTCCCTCTATCGGTGTGTCTGTaGTGGATATCAGGGGAAGGGGGACTTTCCTGTAGC +
Preference number: 6 (lower is better)
Translates to: FFHSSLPLSVCL*WISGEGGLSCS
Trigger: GCTACAGGAAAGTCCCCCTTCCCCTGATATCCACCACAGACACACCGATAGAGGGAGACTGGAATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS CAA 72 bp CTTCCCCCAACCAGGGCAACAGTTCCCTTTACTCATTaGCCAGCGTCTACACACAAAACTGTGAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LPPTRATVPFTH*PASTHKTVRAV
Trigger: CACAGCCCTCACAGTTTTGTGTGTAGACGCTGGCAAATGAGTAAAGGGAACTGTTGCCCTGGTTGGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp CCTTTACTCATTTGCCAGCGTCTACACACAAAACTGTaGGGGCTGTGCCGCCTAAGCACCAGTGTGAGTGAA +
Preference number: 6 (lower is better)
Translates to: PLLICQRLHTKL*GLCRLSTSVSE
Trigger: TTCACTCACACTGGTGCTTAGGCGGCACAGCCCTCACAGTTTTGTGTGTAGACGCTGGCAAATGAGTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp TTTAGGATCCGGCCCATCATCAGACCCATATTCCTCTaGGTCCCTTTTAAGGTGGGTGCAGGAGCATTTGTT +
Preference number: 6 (lower is better)
Translates to: FRIRPIIRPIFL*VPFKVGAGAFV
Trigger: AACAAATGCTCCTGCACCCACCTTAAAAGGGACTCAGAGGAATATGGGTCTGATGATGGGCCGGATCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541010.5
CDS TCA 72 bp TTCAGCGTCCACGCTCGAAGTTTTAAGGGCTCCAGCTaGATTTTAAACATCAAGCTGGCTAAGAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: FSVHARSFKGSS*ILNIKLAKKSS
Trigger: AGAAGACTTCTTAGCCAGCTTGATGTTTAAAATTCAGCTGGAGCCCTTAAAACTTCGAGCGTGGACGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000453597.8
ENST00000454002.6
ENST00000541010.5
ENST00000682809.1