Pregenerated sensors for DNAJB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000162616Ensembl transcript IDs: ENST00000370763.6, ENST00000426517.1, ENST00000476396.1, ENST00000477671.2, ENST00000484662.1, ENST00000487931.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCTTTTGCCTATTTATTTaGCCCGTCTCTATTCATGCA | + |
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Preference number: 2 (lower is better) Translates to: SVIQAIGISTGEKLPLLSFCLFI*PVSIHA Trigger: TGCATGAATAGAGACGGGTCAAATAAATAGGCAAAA...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| 3UTR-3UTR CAA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCCTTTTGCCTATTTATTaGACCCGTCTCTATTCATGC | + |
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Preference number: 3 (lower is better) Translates to: SVIQAIGISTGEKLPLLSLLPIY*TRLYSC Trigger: GCATGAATAGAGACGGGTCAAATAAATAGGCAAAAG...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR TCA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGCTGGAGGATCTTGTTTaGGGCGGGATGGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TDASGYSFTDTSPIAAFQLEDLV*GGMAPQ Trigger: CTGTGGGGCCATCCCGCCTCAAACAAGATCCTCCAG...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCTTGTTTGAGGCGGGATaGCCCCACAGAATTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SVIQAIGISTGEKLPLLSLFEAG*PHRIPV Trigger: GACAGGAATTCTGTGGGGCCATCCCGCCTCAAACAA...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCTCCATCAGTACCTCCTaGTCCTCCTTTCAACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SVIQAIGISTGEKLPLLSSISTS*SSFQPF Trigger: GAAGGGTTGAAAGGAGGAGCAGGAGGTACTGATGGA...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCAGTGTTTTCAGGGGCTaGAGGAAGGGAAGAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: SVIQAIGISTGEKLPLLSSVFRG*RKGRMG Trigger: TCCCATTCTTCCCTTCCTCCAGCCCCTGAAAACACT...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCGGACCCTCCGAAAAATaGAGCAAATGTAGCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVIQAIGISTGEKLPLLSGPSEK*SKCSMR Trigger: CCTCATGCTACATTTGCTGCATTTTTCGGAGGGTCC...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGAAATTTCAAAGGGGTTaGACCCTCCGAAAAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDASGYSFTDTSPIAAFQKFQRG*TLRKMQ Trigger: CTGCATTTTTCGGAGGGTCCAACCCCTTTGAAATTT...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCGGAGGAAGGGAAGAATaGGAAGTAACTGCTAATGGA | + |
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Preference number: 4 (lower is better) Translates to: SVIQAIGISTGEKLPLLSGGREE*EVTANG Trigger: TCCATTAGCAGTTACTTCCCATTCTTCCCTTCCTCC...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR TCA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTTGTTGGTACATTAATTaGGCAGCCACACAATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQNGETDASGYSFTDTSPCWYIN*AATQCL Trigger: GAGGCATTGTGTGGCTGCTCAATTAATGTACCAACA...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGAAGTTCATGAATAACTaGAGGATCTTGTTTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDASGYSFTDTSPIAAFQKFMNN*RILFEA Trigger: CGCCTCAAACAAGATCCTCCAGTTATTCATGAACTT...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDASGYSFTDTSPIAAFQRIPVS*ISIHAE Trigger: TTCAGCATGAATGGATATCCAAGAGACAGGAATTCT...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGAGAAGATATAGTATCTaGGAAGGACACCTCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: TDASGYSFTDTSPIAAFQRRYSI*EGHLKF Trigger: GAATTTGAGGTGTCCTTCCCAGATACTATATCTTCT...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTTTCATCTCCTTCTCTTaGAAAAGTAATTTTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: NQNGETDASGYSFTDTSPFISFS*KSNFGA Trigger: GGCACCAAAATTACTTTTCCAAGAGAAGGAGATGAA...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTTCTCAATTCCCAAAATaGAATAATAGTCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: NQNGETDASGYSFTDTSPSQFPK*NNSLSP Trigger: TGGGGAAAGACTATTATTGCATTTTGGGAATTGAGA...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCACCCGTCTCTATTCATaGAATTTAATGAACCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LTRLYSCNLMNPQKNLHITRLYS*NLMNPQ Trigger: TTGAGGGTTCATTAAATTGCATGAATAGAGACGGGT...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTTGCATAACAAGTAGTTaGAACATTATCCATAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQNGETDASGYSFTDTSPCITSS*NIIHKQ Trigger: CTGCTTATGGATAATGTTGCAACTACTTGTTATGCA...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCTGCTGGAATACTATTTaGTGTTTCATCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTRLYSCNLMNPQKNLHICWNTI*CFISFS Trigger: AGAGAAGGAGATGAAACACCAAATAGTATTCCAGCA...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CCA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCAGTAATTCAAGCAATTaGGATTTCCACAGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LTRLYSCNLMNPQKNLHISNSSN*DFHRRE Trigger: TTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACT...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR GCA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCCCACAGGAGAGAAATTaGCATTACTTTCCTTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: LTRLYSCNLMNPQKNLHIPQERN*HYFPFY Trigger: ATAAAAAGGAAAGTAATGGCAATTTCTCTCCTGTGG...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS GCA 90 bp | ACTTCTCCTGGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTGTTaGTTCGCCGTCACGCCCGTCGTTGTCACGCCCTTCCCCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: TSPGALRAAALSRHC*FAVTPVVVTPFPAD Trigger: GTCCGCGGGGAAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCCAGGAGAAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CCA 90 bp | CGTTTTCAGGAGCATCACCGCGCGGCGTCTCGGACGCACTTCTCCTaGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTGTTGCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: RFQEHHRAASRTHFS*RPPGGSALETLLLR Trigger: GCGAAGCAACAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCCAGGAGAAGTGCGTCCGAGACGCCGCGCGGTGATGCTCCTGAAAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CCA 90 bp | CCTTTTCTTCAGGCTTCCCACCACCCAAACACAGTCGCAGTCAACTaGCCACTATCACCCACCACCCTGCAGGAACAATTACCCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PFLQASHHPNTVAVN*PLSPTTLQEQLPSL Trigger: GAGGCTGGGTAATTGTTCCTGCAGGGTGGTGGGTGATAGTGGCCAGTTGACTGCGACTGTGTTTGGGTGGTGGGAAGCCTGAAGAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS GCA 90 bp | CCTCCTGCTCCTCCTTTCAACCCCCAAGAACGCGCGGAGAGGAGGTaGCAAAAGAAATTCTGTTCTCGCGAAGTCTTAAACTTAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: PPAPPFNPQERAERR*QKKFCSREVLNLIL Trigger: GAGGATTAAGTTTAAGACTTCGCGAGAACAGAATTTCTTTTGGCACCTCCTCTCCGCGCGTTCTTGGGGGTTGAAAGGAGGAGCAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487931.1 |
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| CDS CCA 90 bp | AGGATCTTGTTTGAGGCGGGATGGCCCCACAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAAACCAAAGGCACTAAAAGGATCACC | + |
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Preference number: 5 (lower is better) Translates to: RILFEAGWPHRIPVS*ISIHAETKGTKRIT Trigger: GGTGATCCTTTTAGTGCCTTTGGTTTCAGCATGAATGGATATCCAAGAGACAGGAATTCTGTGGGGCCATCCCGCCTCAAACAAGATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000370763.6 ENST00000426517.1 ENST00000477671.2 ENST00000484662.1 ENST00000487931.1 |
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| CDS-3UTR CAA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTACTGGAGGATCTTGTTaGAGGCGGGATGGCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: NQNGETDASGYSFTDTSPTGGSC*RRDGPT Trigger: TGTGGGGCCATCCCGCCTCAAACAAGATCCTCCAGT...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS CCA 90 bp | TACTCTAAGTTCATGAATAACTGGAGGATCTTGTTTGAGGCGGGATaGCCCCACAGAATTCCTGTCTCTTGGATATCCATTCATGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: YSKFMNNWRILFEAG*PHRIPVSWISIHAE Trigger: TTCAGCATGAATGGATATCCAAGAGACAGGAATTCTGTGGGGCCATCCCGCCTCAAACAAGATCCTCCAGTTATTCATGAACTTAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000370763.6 ENST00000426517.1 ENST00000477671.2 ENST00000484662.1 ENST00000487931.1 |
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| CDS-3UTR CAA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCCCGGAAGGTACCTCCTaGTCCATCAGTACCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LTRLYSCNLMNPQKNLHIPEGTS*SISTSC Trigger: GCAGGAGGTACTGATGGACAAGGAGGTACCTTCCGG...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTAATAACTGGAGGATCTaGTTTGAGGCGGGATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: NQNGETDASGYSFTDTSPNNWRI*FEAGWP Trigger: GGGCCATCCCGCCTCAAACAAGATCCTCCAGTTATT...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | TCAGTAATTCAAGCAATTGGGATTTCCACAGGAGAGAAATTGCCATTACTTTCCCTGCTGGAATACTATTaGGTGTTTCATCTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SVIQAIGISTGEKLPLLSLLEYY*VFHLLL Trigger: GAGAAGGAGATGAAACACCAAATAGTATTCCAGCAG...GGAAAGTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | AATCAAAATGGTGAAACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTGTTGGTCAGGATTTTTaGGAAATGGCAGCCCATATC | + |
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Preference number: 5 (lower is better) Translates to: NQNGETDASGYSFTDTSPVGQDF*EMAAHI Trigger: GATATGGGCTGCCATTTCCAAAAAATCCTGACCAAC...AGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGTTTCACCATTTTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | ACAGATGCATCAGGATATTCTTTTACAGATACCAGCCCTATAGCAGCATTTCAGGAAATCTTCATCCGTTaGGTACAACCACTATATATC | + |
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Preference number: 5 (lower is better) Translates to: TDASGYSFTDTSPIAAFQEIFIR*VQPLYI Trigger: GATATATAGTGGTTGTACCAAACGGATGAAGATTTC...CTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTGATGCATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCCTTTTGCCTATTTATTaGACCCGTCTCTATTCATGC | + |
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Preference number: 5 (lower is better) Translates to: LTRLYSCNLMNPQKNLHILLPIY*TRLYSC Trigger: GCATGAATAGAGACGGGTCAAATAAATAGGCAAAAG...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS-3UTR CAA 90 bp | TTGACCCGTCTCTATTCATGCAATTTAATGAACCCTCAAAAGAATTTACACATCTCCACAGGAGAGAAATaGCCATTACTTTCCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LTRLYSCNLMNPQKNLHISTGEK*PLLSFL Trigger: TAAAAAGGAAAGTAATGGCAATTTCTCTCCTGTGGA...GATGTGTAAATTCTTTTGAGGGTTCATTAAATTGCATGAATAGAGACGGGTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370763.6 |
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| CDS CCA 72 bp | GAGCATCACCGCGCGGCGTCTCGGACGCACTTCTCCTaGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTG | + |
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Preference number: 6 (lower is better) Translates to: EHHRAASRTHFS*RPPGGSALETL Trigger: CAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCCAGGAGAAGTGCGTCCGAGACGCCGCGCGGTGATGCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS GCA 72 bp | GGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTGTTaGTTCGCCGTCACGCCCGTCGTTGTCACGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GALRAAALSRHC*FAVTPVVVTPF Trigger: GAAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CAA 90 bp | CACTTCTCCTGGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTGTaGCTTCGCCGTCACGCCCGTCGTTGTCACGCCCTTCCCCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: HFSWRPPGGSALETL*LRRHARRCHALPRG Trigger: TCCGCGGGGAAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCCAGGAGAAGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CAA 72 bp | TGGCGCCCTCCGGGCGGCAGCGCTCTCGAGACACTGTaGCTTCGCCGTCACGCCCGTCGTTGTCACGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: WRPPGGSALETL*LRRHARRCHAL Trigger: AAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGAGCGCTGCCGCCCGGAGGGCGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CAA 90 bp | CGGCAGCGCTCTCGAGACACTGTTGCTTCGCCGTCACGCCCGTCGTaGTCACGCCCTTCCCCGCGGACACCGAGAATGACCCATAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RQRSRDTVASPSRPS*SRPSPRTPRMTHSG Trigger: TCCGCTATGGGTCATTCTCGGTGTCCGCGGGGAAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGAGCGCTGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CAA 72 bp | TCTCGAGACACTGTTGCTTCGCCGTCACGCCCGTCGTaGTCACGCCCTTCCCCGCGGACACCGAGAATGACC | + |
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Preference number: 6 (lower is better) Translates to: SRDTVASPSRPS*SRPSPRTPRMT Trigger: GGTCATTCTCGGTGTCCGCGGGGAAGGGCGTGACAACGACGGGCGTGACGGCGAAGCAACAGTGTCTCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS TCA 72 bp | CGTCGTTGTCACGCCCTTCCCCGCGGACACCGAGAATaGCCCATAGCGGAAAATTCTACCGCACTACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RRCHALPRGHRE*PIAENSTALPP Trigger: GGGAGGTAGTGCGGTAGAATTTTCCGCTATGGGTCATTCTCGGTGTCCGCGGGGAAGGGCGTGACAACGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS GCA 72 bp | CAGTCGCAGTCAACTGGCCACTATCACCCACCACCCTaGAGGAACAATTACCCAGCCTCACCCCAAGAACGC | + |
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Preference number: 6 (lower is better) Translates to: QSQSTGHYHPPP*RNNYPASPQER Trigger: GCGTTCTTGGGGTGAGGCTGGGTAATTGTTCCTGCAGGGTGGTGGGTGATAGTGGCCAGTTGACTGCGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS CAA 90 bp | TGTAGCATGAGGATCGCCATGAAAGGTGTACCGGAAGGTACCTCCTaGTCCATCAGTACCTCCTGCTCCTCCTTTCAACCCCCAAGAACG | + |
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Preference number: 6 (lower is better) Translates to: CSMRIAMKGVPEGTS*SISTSCSSFQPPRT Trigger: CGTTCTTGGGGGTTGAAAGGAGGAGCAGGAGGTACTGATGGACAAGGAGGTACCTTCCGGTACACCTTTCATGGCGATCCTCATGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487931.1 |
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| CDS GCA 72 bp | ACTGCACTCCAGCCCCAAGAACGCGCGGAGAGGAGGTaGCAAAAGAAATTCTGTTCTCGCGAAGTCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: TALQPQERAERR*QKKFCSREVLN Trigger: GTTTAAGACTTCGCGAGAACAGAATTTCTTTTGGCACCTCCTCTCCGCGCGTTCTTGGGGCTGGAGTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477671.2 |
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| CDS CAA 90 bp | TGTAGCATGAGGATCGCCATGAAAGGTGTACCGGAAGGTACCTCCTaGTCCATCAGTACCTCCTGCTCCTCCTTTCAACCCTGTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: CSMRIAMKGVPEGTS*SISTSCSSFQPCNS Trigger: GGAATTACAGGGTTGAAAGGAGGAGCAGGAGGTACTGATGGACAAGGAGGTACCTTCCGGTACACCTTTCATGGCGATCCTCATGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477671.2 |
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| CDS CAA 90 bp | TGTAGCATGAGGATCGCCATGAAAGGTGTACCGGAAGGTACCTCCTaGTCCATCAGTACCTCCTGCTCCTCCTTTCAACCCCTGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: CSMRIAMKGVPEGTS*SISTSCSSFQPLKI Trigger: GATTTTCAGGGGTTGAAAGGAGGAGCAGGAGGTACTGATGGACAAGGAGGTACCTTCCGGTACACCTTTCATGGCGATCCTCATGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484662.1 |
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| CDS GCA 72 bp | CCTCCTTTCAACCCCCAAGAACGCGCGGAGAGGAGGTaGCAAAAGAAATTCTGTTCTCGCGAAGTCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: PPFNPQERAERR*QKKFCSREVLN Trigger: GTTTAAGACTTCGCGAGAACAGAATTTCTTTTGGCACCTCCTCTCCGCGCGTTCTTGGGGGTTGAAAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487931.1 |
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| CDS CCA 72 bp | TTCATGAATAACTGGAGGATCTTGTTTGAGGCGGGATaGCCCCACAGAATTCCTGTCTCTTGGATATCCATT | + |
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Preference number: 6 (lower is better) Translates to: FMNNWRILFEAG*PHRIPVSWISI Trigger: AATGGATATCCAAGAGACAGGAATTCTGTGGGGCCATCCCGCCTCAAACAAGATCCTCCAGTTATTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000370763.6 ENST00000426517.1 ENST00000477671.2 ENST00000484662.1 ENST00000487931.1 |
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| CDS CAA 90 bp | GATTTCCCTAGTCCTGTGATGACAATTCAGAATATGATCTTACATTaGAGTACCCACAGGATGGGGTGGGAGAAACTACGCCTAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: DFPSPVMTIQNMILH*STHRMGWEKLRLRS Trigger: GCTTCTTAGGCGTAGTTTCTCCCACCCCATCCTGTGGGTACTCAAATGTAAGATCATATTCTGAATTGTCATCACAGGACTAGGGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426517.1 |
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| CDS TCA 72 bp | AGGTATGTTTCTTCCATCCAGTGTTGGTACATTAATTaGGCAGCCACACAATGCCTTCCTCCCCAAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: RYVSSIQCWYIN*AATQCLPPQTD Trigger: ATCAGTTTGGGGAGGAAGGCATTGTGTGGCTGCTCAATTAATGTACCAACACTGGATGGAAGAAACATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476396.1 |
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| CDS CAA 72 bp | AGTCCTGTGATGACAATTCAGAATATGATCTTACATTaGAGTACCCACAGGATGGGGTGGGAGAAACTACGC | + |
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Preference number: 6 (lower is better) Translates to: SPVMTIQNMILH*STHRMGWEKLR Trigger: GCGTAGTTTCTCCCACCCCATCCTGTGGGTACTCAAATGTAAGATCATATTCTGAATTGTCATCACAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426517.1 |
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| CDS CAA 90 bp | AGTTCTTCATTCTATGAGGCAGGAAGATGTTTCCTAAGTACTTCTTaGGATGAAGAAGATATAGTATCTGGGAAGGACACCTCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSFYEAGRCFLSTS*DEEDIVSGKDTSNS Trigger: AGAATTTGAGGTGTCCTTCCCAGATACTATATCTTCTTCATCCAAAGAAGTACTTAGGAAACATCTTCCTGCCTCATAGAATGAAGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370763.6 ENST00000476396.1 ENST00000487931.1 |
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