Pregenerated sensors for DNAJA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000069345Ensembl transcript IDs: ENST00000317089.10, ENST00000563158.1, ENST00000617000.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATCATGATGCGCACACCTCGACCTCGACAAGCACTACACTTTTaGACAGCTCCAGACTTTCCGCCTTGGCCACTGCATGCACTACAG | + |
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Preference number: 1 (lower is better) Translates to: LIMMRTPRPRQALHF*TAPDFPPWPLHALQ Trigger: CTGTAGTGCATGCAGTGGCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGTGTGCGCATCATGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CCA 90 bp | TCCATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTaGAGCCAGCTGTCTGATCATGATGCGCACACCTCGACCTCGACA | + |
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Preference number: 1 (lower is better) Translates to: SITIRAHRLHLLYHP*SQLSDHDAHTSTST Trigger: TGTCGAGGTCGAGGTGTGCGCATCATGATCAGACAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR GCA 90 bp | ATATCATCCATGCCACCACCTCCGCCGCTGCCTTCCCGAAGACCTTaGTCTCCGTATCTGTCATATAACTCACGCTTCTCAGGATTTGAT | + |
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Preference number: 1 (lower is better) Translates to: ISSMPPPPPLPSRRP*SPYLSYNSRFSGFD Trigger: ATCAAATCCTGAGAAGCGTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTGGCATGGATGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR GCA 90 bp | TCATTAATTACCTCTCCTTCTCCATTACAATCAGAGCACACAGACTaGATCTGTTGTACCATCCCTGGAGCCAGCTGTCTGATCATGATG | + |
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Preference number: 1 (lower is better) Translates to: SLITSPSPLQSEHTD*ICCTIPGASCLIMM Trigger: CATCATGATCAGACAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGAGAAGGAGAGGTAATTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCACCACCTCCGCCGCTaGCTTCCCGAAGACCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLHYNQSTQTASVVPSLEHHLRR*LPEDLA Trigger: AGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTG...CTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CAA 90 bp | TCTGATCATGATGCGCACACCTCGACCTCGACAAGCACTACACTTTaGGACAGCTCCAGACTTTCCGCCTTGGCCACTGCATGCACTACA | + |
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Preference number: 2 (lower is better) Translates to: SDHDAHTSTSTSTTL*DSSRLSALATACTT Trigger: TGTAGTGCATGCAGTGGCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGTGTGCGCATCATGATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR TCA 90 bp | ACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGTACTCTGATTGCCCATaGAGCCGAACAATCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TSTSTSTTLLDSSRLSALYSDCP*SRTIPH Trigger: GTGGGGGATTGTTCGGCTTCATGGGCAATCAGAGTA...CAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | ACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGAGAAAATATCATCCATaGCACCACCTCCGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TSTSTSTTLLDSSRLSALRKYHP*HHLRRC Trigger: GCAGCGGCGGAGGTGGTGGCATGGATGATATTTTCT...CAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTTCCGCCTTGGCCACTaGATGCACTACAGAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: DYDTAASLHLELHEHTLVFRLGH*MHYRAH Trigger: ATGTGCTCTGTAGTGCATGCAGTGGCCAAGGCGGAA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR TCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTTTCGACTTCTACTCTaGTTGCCCATGAAGCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: DYDTAASLHLELHEHTLVFRLLL*LPMKPN Trigger: GTTCGGCTTCATGGGCAATCAGAGTAGAAGTCGAAA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTCAGAGCACACAGACTaGATCTGTTGTACCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: DYDTAASLHLELHEHTLVSEHTD*ICCTIP Trigger: AGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGCCTTCCCGAAGACCTTaGTCTCCGTATCTGTCATAT | + |
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Preference number: 2 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLPSRRP*SPYLSY Trigger: ATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGG...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR GCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGGATACTTTGAGTGGATaGATCATGTCCTCTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HPFTSNYTNTPWFNYFARDTLSG*IMSSPL Trigger: AAGAGGAGAGGACATGATGCATCCACTCAAAGTATC...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR TCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGATAATAATCCATGTGTaGAAGGGAGTCTTGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HPFTSNYTNTPWFNYFARIIIHV*KGVLFP Trigger: AGGAAACAAGACTCCCTTTCACACATGGATTATTAT...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CAA 90 bp | TGGCCACTGCATGCACTACAGAGCACATTCTTGCTAAGTTGTAGTTaGGTTGTCTTGCCATTATACAGATCTTCTAAAGATACTTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: WPLHALQSTFLLSCS*VVLPLYRSSKDTLS Trigger: ACTCAAAGTATCTTTAGAAGATCTGTATAATGGCAAGACAACCAAACTACAACTTAGCAAGAATGTGCTCTGTAGTGCATGCAGTGGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR GCA 72 bp | ATGCCACCACCTCCGCCGCTGCCTTCCCGAAGACCTTaGTCTCCGTATCTGTCATATAACTCACGCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: MPPPPPLPSRRP*SPYLSYNSRFS Trigger: TGAGAAGCGTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR GCA 72 bp | GAGAGAAAATATCATCCATGCCACCACCTCCGCCGCTaGCTTCCCGAAGACCTTGCTCTCCGTATCTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: ERKYHPCHHLRR*LPEDLALRICH Trigger: ATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTGGCATGGATGATATTTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CCA 72 bp | ATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTaGAGCCAGCTGTCTGATCATGATGCGCACACCTCG | + |
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Preference number: 3 (lower is better) Translates to: IRAHRLHLLYHP*SQLSDHDAHTS Trigger: CGAGGTGTGCGCATCATGATCAGACAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGGCCTTCCCGAAGACCTaGCTCTCCGTATCTGTCATA | + |
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Preference number: 3 (lower is better) Translates to: HPFTSNYTNTPWFNYFARAFPKT*LSVSVI Trigger: TATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGC...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR GCA 72 bp | AACAATGTCTCCGGGTTCCACTCCTGGGGCCTGGTCTaGTTCCCCAGTGAATGTAATTCTCTGTCCATGTTT | + |
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Preference number: 3 (lower is better) Translates to: NNVSGFHSWGLV*FPSECNSLSMF Trigger: AAACATGGACAGAGAATTACATTCACTGGGGAAGCAGACCAGGCCCCAGGAGTGGAACCCGGAGACATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | AAGGGATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTCTACAGAGCACATTCTaGCTAAGTTGTAGTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: KGLRYCGIPSPRTTRTHPLQSTF*LSCSLV Trigger: AACCAAACTACAACTTAGCAAGAATGTGCTCTGTAG...AGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGCACGCTTCTCAGGATTaGATAGTACTTCATATGCAA | + |
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Preference number: 3 (lower is better) Translates to: HPFTSNYTNTPWFNYFARHASQD*IVLHMQ Trigger: TTGCATATGAAGTACTATCAAATCCTGAGAAGCGTG...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | AAGGGATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTTGTAGTTTGGTTGTCTaGCCATTATACAGATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: KGLRYCGIPSPRTTRTHPCSLVV*PLYRSS Trigger: AGAAGATCTGTATAATGGCAAGACAACCAAACTACA...AGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTTGCTAAGTTGTAGTTaGGTTGTCTTGCCATTATAC | + |
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Preference number: 3 (lower is better) Translates to: DYDTAASLHLELHEHTLVLLSCS*VVLPLY Trigger: GTATAATGGCAAGACAACCAAACTACAACTTAGCAA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCCATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGTCTTCTAAAGATACTTaGAGTGGATGCATCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: LLHYNQSTQTASVVPSLESSKDT*SGCIMS Trigger: GGACATGATGCATCCACTCAAAGTATCTTTAGAAGA...CTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | CTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGGCCGGCCGGCCGGGCAGTaGTCGGGGAGAAGGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LDLDKHYTFGQLQTFRLGRPAGQ*SGRRWR Trigger: TCGCCACCTTCTCCCCGAGCACTGCCCGGCCGGCCG...GCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | ACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGTCAGCTCGTTCTCGCTaGCGCCGGGCGGGACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSTSTSTTLLDSSRLSALSARSR*RRAGRP Trigger: TGGGCGTCCCGCCCGGCGCCAGCGAGAACGAGCTGA...CAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGCACCACCTCCGCCGCTaGCTTCCCGAAGACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: HPFTSNYTNTPWFNYFARHHLRR*LPEDLA Trigger: AGCAAGGTCTTCGGGAAGGCAGCGGCGGAGGTGGTG...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | AAGGGATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTTGCTCGGGGAGAAGGTaGCGAAGCAGACAGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: KGLRYCGIPSPRTTRTHPCSGRR*RSRQSG Trigger: TCCGCTCTGTCTGCTTCGCCACCTTCTCCCCGAGCA...AGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | AAGGGATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTCCAGACTTTCCGCCTTaGCCACTGCATGCACTACAG | + |
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Preference number: 4 (lower is better) Translates to: KGLRYCGIPSPRTTRTHPPDFPP*PLHALQ Trigger: CTGTAGTGCATGCAGTGGCCAAGGCGGAAAGTCTGG...AGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | GTAGCAAAAGAACAATGTCTCCGGGTTCCACTCCTGGGGCCTGGTCTGCTTCCCCAAGCACTACACTTTTaGACAGCTCCAGACTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: VAKEQCLRVPLLGPGLLPQALHF*TAPDFP Trigger: CGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTG...GGGAAGCAGACCAGGCCCCAGGAGTGGAACCCGGAGACATTGTTCTTTTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | CTCCGCCGCTGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACTTTCGACTTCTACTCTaGTTGCCCATGAAGCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LRRCLPEDLALRICHITHFRLLL*LPMKPN Trigger: GTTCGGCTTCATGGGCAATCAGAGTAGAAGTCGAAA...GTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTGCACTCCAGGTCCATaGTGGCTGCTGCTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DYDTAASLHLELHEHTLVCTPGP*WLLLSS Trigger: TGAAGAAAGCAGCAGCCATCATGGACCTGGAGTGCA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGTACTCTGATTGCCCATaGAGCCGAACAATCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: HPFTSNYTNTPWFNYFARYSDCP*SRTIPH Trigger: GTGGGGGATTGTTCGGCTTCATGGGCAATCAGAGTA...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | AAGGGATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGTTTGCAGAGTTTACTaGTGGGCACACTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGLRYCGIPSPRTTRTHPVCRVY*WAHCTP Trigger: TGGAGTGCAGTGTGCCCATCAGTAAACTCTGCAAAC...AGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGAGAAAATATCATCCATaGCACCACCTCCGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLRKYHP*HHLRRC Trigger: GCAGCGGCGGAGGTGGTGGCATGGATGATATTTTCT...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGTTCCGCCTTGGCCACTaGATGCACTACAGAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLFRLGH*MHYRAH Trigger: ATGTGCTCTGTAGTGCATGCAGTGGCCAAGGCGGAA...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | TGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACGCTTCTCAGTCCTGGGGCCTGGTCTaGTTCCCCAGTGAATGTAAT | + |
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Preference number: 4 (lower is better) Translates to: CLPEDLALRICHITHASQSWGLV*FPSECN Trigger: ATTACATTCACTGGGGAAGCAGACCAGGCCCCAGGA...CTGAGAAGCGTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | ATCATGATGCGCACACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCACCTTCCCGAAGACCTTaGTCTCCGTATCTGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: IMMRTPRPRQALHFWTAPPSRRP*SPYLSY Trigger: ATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGG...TGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGTGTGCGCATCATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | ATCATGATGCGCACACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCATCAGAGCACACAGACTaGATCTGTTGTACCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: IMMRTPRPRQALHFWTAPSEHTD*ICCTIP Trigger: AGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGA...TGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGTGTGCGCATCATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGAAGGGATTACGATACTaGGGCATCCCTTCACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HPFTSNYTNTPWFNYFARKGLRY*GIPSPR Trigger: TCGAGGTGAAGGGATGCCGCAGTATCGTAATCCCTT...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGCTGTTGTACCATCCCTaGAGCCAGCTGTCTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLLLYHP*SQLSDH Trigger: ATGATCAGACAGCTGGCTCCAGGGATGGTACAACAG...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | CTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGGCTCATTCCCATCTCTCTaGAATACCTCATGTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LDLDKHYTFGQLQTFRLGSFPSL*NTSCSF Trigger: GAAAGAACATGAGGTATTTCAGAGAGATGGGAATGA...GCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | ACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGTATTTCACCACAATCTaGCGTCCATCAAGGTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: TSTSTSTTLLDSSRLSALYFTTI*RPSRCL Trigger: TAAGCACCTTGATGGACGTCAGATTGTGGTGAAATA...CAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTTACACGAACACACCCTaGTTCAATTACTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DYDTAASLHLELHEHTLVYTNTP*FNYFAR Trigger: CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTA...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | CTCCGCCGCTGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACTGCTTAAATGTGAACTaGAATCCACATAGAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRRCLPEDLALRICHITHCLNVN*NPHRAS Trigger: TGAAGCTCTATGTGGATTTCAGTTCACATTTAAGCA...GTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAGGATGATATTCCTTaGCTAACTTTCTGTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: DYDTAASLHLELHEHTLVQDDIP*LTFCMP Trigger: AGGCATACAGAAAGTTAGCCAAGGAATATCATCCTG...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CAA 72 bp | CCGCCTTGGCCACTGCATGCACTACAGAGCACATTCTaGCTAAGTTGTAGTTTGGTTGTCTTGCCATTATAC | + |
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Preference number: 4 (lower is better) Translates to: PPWPLHALQSTF*LSCSLVVLPLY Trigger: GTATAATGGCAAGACAACCAAACTACAACTTAGCAAGAATGTGCTCTGTAGTGCATGCAGTGGCCAAGGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR GCA 90 bp | CTTCTCCATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGTCTGTCCATGTTTCATaGCTTTGTCTACGTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LLHYNQSTQTASVVPSLESVHVS*LCLRGL Trigger: AAGTCCACGTAGACAAAGGCATGAAACATGGACAGA...CTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGATGCCTTTGTCTACGTaGACTTCAAGAATCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: HPFTSNYTNTPWFNYFARMPLST*TSRILT Trigger: AGTCAAGATTCTTGAAGTCCACGTAGACAAAGGCAT...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | CATCCCTTCACCTCGAACTACACGAACACACCCTGGTTCAATTACTTTGCCAGGGGATTCTTATCAGGATaGTATTCCTTGGCTAACTTT | + |
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Preference number: 4 (lower is better) Translates to: HPFTSNYTNTPWFNYFARGFLSG*YSLANF Trigger: AAAGTTAGCCAAGGAATATCATCCTGATAAGAATCC...CCTGGCAAAGTAATTGAACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR TCA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGATAATAATCCATGTGTaGAAGGGAGTCTTGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLIIIHV*KGVLFP Trigger: AGGAAACAAGACTCCCTTTCACACATGGATTATTAT...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| 3UTR CAA 72 bp | CATGCACTACAGAGCACATTCTTGCTAAGTTGTAGTTaGGTTGTCTTGCCATTATACAGATCTTCTAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: HALQSTFLLSCS*VVLPLYRSSKD Trigger: ATCTTTAGAAGATCTGTATAATGGCAAGACAACCAAACTACAACTTAGCAAGAATGTGCTCTGTAGTGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | ACCTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGCACAGACTGCATCTGTaGTACCATCCCTGGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TSTSTSTTLLDSSRLSALHRLHL*YHPWSQ Trigger: CTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTG...CAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | GTAGCAAAAGAACAATGTCTCCGGGTTCCACTCCTGGGGCCTGGTCTGCTTCCCACAAGCACTACACTTTaGGACAGCTCCAGACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VAKEQCLRVPLLGPGLLPTSTTL*DSSRLS Trigger: GGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGT...GGGAAGCAGACCAGGCCCCAGGAGTGGAACCCGGAGACATTGTTCTTTTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | GATTACGATACTGCGGCATCCCTTCACCTCGAACTACACGAACACACCCTGGTTGCCTTCCCGAAGACCTaGCTCTCCGTATCTGTCATA | + |
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Preference number: 5 (lower is better) Translates to: DYDTAASLHLELHEHTLVAFPKT*LSVSVI Trigger: TATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGC...AACCAGGGTGTGTTCGTGTAGTTCGAGGTGAAGGGATGCCGCAGTATCGTAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTTCTCCATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGTCCAGACTTTCCGCCTaGGCCACTGCATGCACTACA | + |
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Preference number: 5 (lower is better) Translates to: LLHYNQSTQTASVVPSLESRLSA*ATACTT Trigger: TGTAGTGCATGCAGTGGCCAAGGCGGAAAGTCTGGA...CTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAATGGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGGCTCTGGGTTGATCCAGTaGTTTTCAGGAAACTGCACA | + |
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Preference number: 5 (lower is better) Translates to: LDLDKHYTFGQLQTFRLGSGLIQ*FSGNCT Trigger: TGTGCAGTTTCCTGAAAACAACTGGATCAACCCAGA...GCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCTCGACAAGCACTACACTTTTGGACAGCTCCAGACTTTCCGCCTTGGCTCTAGTTCAGAAAGCTaGTCTGGGTTGATCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LDLDKHYTFGQLQTFRLGSSSES*SGLIQL Trigger: CAACTGGATCAACCCAGACAAGCTTTCTGAACTAGA...GCCAAGGCGGAAAGTCTGGAGCTGTCCAAAAGTGTAGTGCTTGTCGAGGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTCCGCCGCTGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACCTACAGAGCACATTCTaGCTAAGTTGTAGTTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LRRCLPEDLALRICHITHLQSTF*LSCSLV Trigger: AACCAAACTACAACTTAGCAAGAATGTGCTCTGTAG...GTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTCCGCCGCTGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACTGTAGTTTGGTTGTCTaGCCATTATACAGATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LRRCLPEDLALRICHITHCSLVV*PLYRSS Trigger: AGAAGATCTGTATAATGGCAAGACAACCAAACTACA...GTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | CTCCGCCGCTGCCTTCCCGAAGACCTTGCTCTCCGTATCTGTCATATAACTCACTTGCTAAGTTGTAGTTaGGTTGTCTTGCCATTATAC | + |
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Preference number: 5 (lower is better) Translates to: LRRCLPEDLALRICHITHLLSCS*VVLPLY Trigger: GTATAATGGCAAGACAACCAAACTACAACTTAGCAA...GTGAGTTATATGACAGATACGGAGAGCAAGGTCTTCGGGAAGGCAGCGGCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGCACGCTTCTCAGGATTaGATAGTACTTCATATGCAA | + |
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Preference number: 5 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLHASQD*IVLHMQ Trigger: TTGCATATGAAGTACTATCAAATCCTGAGAAGCGTG...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS-3UTR CAA 90 bp | ATTACAATCAGAGCACACAGACTGCATCTGTTGTACCATCCCTGGAGCCAGCTGTCTTCTAAAGATACTTaGAGTGGATGCATCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: ITIRAHRLHLLYHPWSQLSSKDT*SGCIMS Trigger: GGACATGATGCATCCACTCAAAGTATCTTTAGAAGA...CAGCTGGCTCCAGGGATGGTACAACAGATGCAGTCTGTGTGCTCTGATTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563158.1 |
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| CDS TCA 90 bp | GTGAGGATGCTGTGGGGCTTAAATGCCTCGTGTGCTTTGAAATCCTaGGATGAAAGATATCGCAGCATTGCAAATAGCAATAATAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VRMLWGLNASCALKS*DERYRSIANSNNKA Trigger: GGCCTTATTATTGCTATTTGCAATGCTGCGATATCTTTCATCTCAGGATTTCAAAGCACACGAGGCATTTAAGCCCCACAGCATCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS TCA 90 bp | AAACGTTCAAACATTATCCATATTTTCCCTATTGTCAAGTGTCTTTaGTGGCCAAGTAACCAGACCAAGACGACCCTAATAAATTCGAGA | + |
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Preference number: 5 (lower is better) Translates to: KRSNIIHIFPIVKCL*WPSNQTKTTLINSR Trigger: TCTCGAATTTATTAGGGTCGTCTTGGTCTGGTTACTTGGCCATCAAAGACACTTGACAATAGGGAAAATATGGATAATGTTTGAACGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CCA 72 bp | CCATGGCGGCCGGCCGGGCAGTGCTCGGGGAGAAGGTaGCGAAGCAGACAGAGCGGAGTCGGGCCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: PWRPAGQCSGRR*RSRQSGVGPTS Trigger: GCTTGTGGGCCCGACTCCGCTCTGTCTGCTTCGCCACCTTCTCCCCGAGCACTGCCCGGCCGGCCGCCATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317089.10 ENST00000563158.1 |
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| CDS CAA 90 bp | TGGTGGTTAACTGGGGTCGTGGTGGCAACTTCGGTGGTAGAGAAGTaGCACACACTCTCAACGAGGTGTTTGGGTCCTAAAGCACTTAAA | + |
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Preference number: 6 (lower is better) Translates to: WWLTGVVVATSVVEK*HTLSTRCLGPKALK Trigger: TTTAAGTGCTTTAGGACCCAAACACCTCGTTGAGAGTGTGTGCAACTTCTCTACCACCGAAGTTGCCACCACGACCCCAGTTAACCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CCA 72 bp | GGCCTTCTATTTATGTTTACTGTACACTCAGGCGTTTaGCTGGGACCACGGCTTATTCCTAAGCAGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: GLLFMFTVHSGV*LGPRLIPKQVQ Trigger: CTGTACCTGCTTAGGAATAAGCCGTGGTCCCAGCCAAACGCCTGAGTGTACAGTAAACATAAATAGAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CCA 72 bp | CGTCTTTTGGTGTTTTATTTGCACGTGGTGGTTAACTaGGGTCGTGGTGGCAACTTCGGTGGTAGAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RLLVFYLHVVVN*GRGGNFGGREV Trigger: AACTTCTCTACCACCGAAGTTGCCACCACGACCCCAGTTAACCACCACGTGCAAATAAAACACCAAAAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CAA 90 bp | GCAACTTCGGTGGTAGAGAAGTTGCACACACTCTCAACGAGGTGTTaGGGTCCTAAAGCACTTAAATCTTCATTCACGGAGGCTCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ATSVVEKLHTLSTRC*GPKALKSSFTEARE Trigger: TTCACGAGCCTCCGTGAATGAAGATTTAAGTGCTTTAGGACCCAAACACCTCGTTGAGAGTGTGTGCAACTTCTCTACCACCGAAGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CCA 72 bp | TTCTATTTATGTTTACTGTACACTCAGGCGTTTGGCTaGGACCACGGCTTATTCCTAAGCAGGTACAGGACA | + |
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Preference number: 6 (lower is better) Translates to: FYLCLLYTQAFG*DHGLFLSRYRT Trigger: TGTCCTGTACCTGCTTAGGAATAAGCCGTGGTCCCAGCCAAACGCCTGAGTGTACAGTAAACATAAATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CAA 72 bp | GTGGTAGAGAAGTTGCACACACTCTCAACGAGGTGTTaGGGTCCTAAAGCACTTAAATCTTCATTCACGGAG | + |
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Preference number: 6 (lower is better) Translates to: VVEKLHTLSTRC*GPKALKSSFTE Trigger: CTCCGTGAATGAAGATTTAAGTGCTTTAGGACCCAAACACCTCGTTGAGAGTGTGTGCAACTTCTCTACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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| CDS CAA 72 bp | AAACAAAACGTTCAAACATTATCCATATTTTCCCTATaGTCAAGTGTCTTTGATGGCCAAGTAACCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: KQNVQTLSIFSL*SSVFDGQVTRP Trigger: TGGTCTGGTTACTTGGCCATCAAAGACACTTGACAATAGGGAAAATATGGATAATGTTTGAACGTTTTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617000.1 |
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