RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH8 (Homo sapiens)

Ensembl gene IDs: ENSG00000124721

Ensembl transcript IDs: ENST00000327475.11, ENST00000359357.7, ENST00000373278.8, ENST00000449981.6

Found 1182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTATGTGGGTTCTGGTaGCCTGAGCAGATGGAAATG +
Preference number: 2 (lower is better)
Translates to: RVIKELLGRKDTHITESLLCGFW*PEQMEM
Trigger: CATTTCCATCTGCTCAGGGCACCAGAACCCACATAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
3UTR-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGAAAAACCAGGATTaGGCATCACGAGAAGAATGT +
Preference number: 2 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWKNQD*ASREEC
Trigger: ACATTCTTCTCGTGATGCTCAATCCTGGTTTTTCCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
3UTR-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGGAAAAACCAGGATaGAGCATCACGAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMEKPG*SITRRM
Trigger: CATTCTTCTCGTGATGCTCAATCCTGGTTTTTCCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGCTTCCGCGGGTGGCTaGGGGCCGGAACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSASAGG*GPELLL
Trigger: CAGGAGGAGTTCCGGCCCGCAGCCACCCGCGGAAGC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGGATGCTTCCGCGGGTaGCTGCGGGCCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSGCFRG*LRAGTP
Trigger: AGGAGTTCCGGCCCGCAGCCACCCGCGGAAGCATCC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGCCTCTTCCTCTTCTaGACGGGGAGGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGLFLF*TGRGSL
Trigger: GAGGCTGCCCCTCCCCGTTCAGAAGAGGAAGAGGCC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGGAGGAGCCTCTaGTCCCTCAGAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRGRSL*SLRRGA
Trigger: GGCGCCCCTTCTGAGGGAGCAGAGGCTCCTCCCTCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGCTGTTGCCCCCAGTaGGCCACTCCTCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSCCCPQ*ATPLLT
Trigger: GGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACACTCAGCCCATCGATaGGAGTGGAGGCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHSAHR*EWRRPA
Trigger: TGCAGGCCGCCTCCACTCTCATCGATGGGCTGAGTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGGCCGGAACTCCTCCTaGGCCGCGTTGATCTTGATC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWGRNSS*AALILI
Trigger: GATCAAGATCAACGCGGCTCAGGAGGAGTTCCGGCC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCACGGGTAACTGCGTaGAGAGTACCTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRARVTA*RVPWGW
Trigger: CCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCTAACCGGCCTTCCTaGTTGGCCAGGTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRANRPS*LARLAF
Trigger: GAAGGCCAACCTGGCCAAGCAGGAAGGCCGGTTAGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGTCACAGTGTCCAGTaGCCAGCCTTTGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGHSVQ*PAFVGT
Trigger: CGTGCCCACAAAGGCTGGGCACTGGACACTGTGACC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGGTCACAGTGTCCAGTaGCCAGCCTTTGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWGHSVQ*PAFVGT
Trigger: CGTGCCCACAAAGGCTGGGCACTGGACACTGTGACC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCGTCTGTCCCAGGCTaGTCCATCCATGTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPSVPG*SIHVEP
Trigger: GGGCTCTACATGGATGGAGCAGCCTGGGACAGACGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACACTTCCGAAATCACTaGCTGAACCGGTCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHFRNH*LNRSRC
Trigger: GCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCCCCAGGGGGTGACGTaGTCTCCTCCTTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMPQGVT*SPPWSV
Trigger: GACAGACCAAGGAGGAGATCACGTCACCCCCTGGGG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGAGAAACCATCTTCTaGCGGGGCCTCCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRETIF*RGLHCR
Trigger: CCGACAGTGGAGGCCCCGGCAGAAGATGGTTTCTCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTGAACCGGTCGCGGTaGAAGCCTCTGTCGAACTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLNRSR*KPLSNS
Trigger: AGAGTTCGACAGAGGCTTGCACCGCGACCGGTTCAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAATCAGAGCCTCCCTTaGCCAGCGGCTGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNQSLP*PAAEPV
Trigger: GACTGGTTCAGCCGCTGGCCAAGGGAGGCTCTGATT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGTGCCCAGCCTTTGTaGGCACGGGTCACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSAQPL*ARVTSC
Trigger: GCAAGAAGTGACCCGTGCCCACAAAGGCTGGGCACT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGTGCCCAGCCTTTGTaGGCACGGGTCACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSAQPL*ARVTSC
Trigger: GCAAGAAGTGACCCGTGCCCACAAAGGCTGGGCACT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCATGAATGTCCTCAATaGGAAGGGGTCGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSHECPQ*EGVGPR
Trigger: CCTTGGGCCGACCCCTTCTCATTGAGGACATTCATG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATGAATGTCCTCAATaGGAAGGGGTCGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHECPQ*EGVGPR
Trigger: CCTTGGGCCGACCCCTTCTCATTGAGGACATTCATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGGGGGTGGATTCCATaGGCTTCCCATTCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSWGWIP*ASHSVC
Trigger: ACAGACGGAATGGGAAGCTCATGGAATCCACCCCCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCACGGGTAACTGCGTaGAGAGTACCTTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMARVTA*RVPWGW
Trigger: CCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCTCTCAGGATCCAGTaGTCCGGGGACAACACTGTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPLRIQ*SGDNTV
Trigger: AACAGTGTTGTCCCCGGATCACTGGATCCTGAGAGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCACCTCCCATGTTCATaGCCAAGGCCTGAGCTAACG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWHLPCS*PRPELT
Trigger: CGTTAGCTCAGGCCTTGGGCATGAACATGGGAGGTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACACCTCCCATGTTCATaGCCAAGGCCTGAGCTAACG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHLPCS*PRPELT
Trigger: CGTTAGCTCAGGCCTTGGGCATGAACATGGGAGGTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGCACGGGTAACTaGGTGAAGAGTACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRWSTGN*VKSTLG
Trigger: CCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCGACCACCTCCAGGGTaGATCATTGCTGCTATGAGC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRPPPG*IIAAMS
Trigger: GCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCTGCTTGGCCAGGTTaGCCTTCAGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPAWPG*PSEATL
Trigger: AAGTGTTGCCTCTGAAGGCCAACCTGGCCAAGCAGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACCACTCAGCCCACTaGGGCCGGCCCCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDHSAH*GRPQRL
Trigger: CAACCGCTGGGGCCGGCCTCAGTGGGCTGAGTGGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCAGGAGAGTAGGGATTaGAGCGCACTCCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSQESRD*SALLSF
Trigger: AAAGCTGAGGAGTGCGCTTCAATCCCTACTCTCCTG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCAGGAGAGTAGGGATTaGAGCGCACTCCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWQESRD*SALLSF
Trigger: AAAGCTGAGGAGTGCGCTTCAATCCCTACTCTCCTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCCTTAGGGAACTGCTaGAGGCTCCACAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSLGNC*RLHRNP
Trigger: AGGATTCCTGTGGAGCCTTCAGCAGTTCCCTAAGGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAGTTTGTGGGTCTATaGGGAGTGGGTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSREFVGL*GVGIWW
Trigger: CCACCAGATACCCACTCCTCATAGACCCACAAACTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGATACTGCAGGGAGATaGGGCTGTATGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWDTAGR*GCMVWE
Trigger: TTCCCACACCATACAGCCGCATCTCCCTGCAGTATC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACACTTCTTGCCTCATTaGTGTGAGGAAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHFLPH*CEEALG
Trigger: CCCCAAGGCTTCCTCACAGCAATGAGGCAAGAAGTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCACGGGTCACTTCTTaGCTCATTGCTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRARVTS*LIAVRK
Trigger: CTTCCTCACAGCAATGAGGCAAGAAGTGACCCGTGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCACGGGTCACTTCTTaGCTCATTGCTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWARVTS*LIAVRK
Trigger: CTTCCTCACAGCAATGAGGCAAGAAGTGACCCGTGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTGGGGTCCTTGGGTaGCGTGGAGTTAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLGVLG*RGVNGK
Trigger: TTTGCCATTAACTCCACGGCACCCAAGGACCCCAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTTGGGGTCCTTGGGTaGCGTGGAGTTAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLGVLG*RGVNGK
Trigger: TTTGCCATTAACTCCACGGCACCCAAGGACCCCAAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGCGGCTGTATGGTGTaGGAATCACTGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSCGCMV*ESLACP
Trigger: TGGACAAGCCAGTGATTCCCACACCATACAGCCGCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGCGGCTGTATGGTGTaGGAATCACTGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCGCMV*ESLACP
Trigger: TGGACAAGCCAGTGATTCCCACACCATACAGCCGCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGGAGATGCGGCTGTATaGTGTGGGAATCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWGDAAV*CGNHWL
Trigger: AAGCCAGTGATTCCCACACCATACAGCCGCATCTCC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCCAGCGATAGGGTTTaGGAGGACAGGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSSDRV*EDRLSG
Trigger: ACCTGAAAGCCTGTCCTCCCAAACCCTATCGCTGGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCTGCGCGTACACCTTaGGGTGGCTCATTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPARTP*GGSLVN
Trigger: ATTCACTAATGAGCCACCCCAAGGTGTACGCGCAGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACCAGAAGCCCAGTGTaGACGAATCCCAAGACACTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTRSPV*TNPKTL
Trigger: GAGTGTCTTGGGATTCGTCCACACTGGGCTTCTGGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACCAGAAGCCCAGTGTaGACGAATCCCAAGACACTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTRSPV*TNPKTL
Trigger: GAGTGTCTTGGGATTCGTCCACACTGGGCTTCTGGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTGATGAACAGTTTCTaGGTTGCTGGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLMNSF*VAGCSS
Trigger: ACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGTTATACTGACGGATaGCAGCTTTACCGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCYTDG*QLYRPD
Trigger: GTCCGGACGGTAAAGCTGTCATCCGTCAGTATAACA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGTCTTGTACTTCTaGAAGTCCTGCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRVLYF*KSCRAS
Trigger: TGAGGCCCTGCAGGACTTTCAGAAGTACAAGACTCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGAGTCTTGTACTTCTaGAAGTCCTGCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRRVLYF*KSCRAS
Trigger: TGAGGCCCTGCAGGACTTTCAGAAGTACAAGACTCT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCAACTCCTTCTCCTTaGCTGCAAGATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPTPSP*LQDPER
Trigger: TCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCAACTCCTTCTCCTTaGCTGCAAGATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPTPSP*LQDPER
Trigger: TCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCCAATGCATCAATTTaGTTGGTGGGGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWANASI*LVGSDP
Trigger: GGGATCTGACCCCACCAATCAAATTGATGCATTGGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACCACCCTGCTGCATTaGCATCTGAATCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTTLLH*HLNQLS
Trigger: CGAAAGCTGATTCAGATGTCAATGCAGCAGGGTGGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACCACCCTGCTGCATTaGCATCTGAATCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTTLLH*HLNQLS
Trigger: CGAAAGCTGATTCAGATGTCAATGCAGCAGGGTGGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTTCTGGTGCCCTaGGCAGATGGAAATGAACTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRWVLVP*ADGNEL
Trigger: AAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGGGTTCTGGTGCCCTaGGCAGATGGAAATGAACTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSWVLVP*ADGNEL
Trigger: AAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAACACCCACCAGCAATaGATTTCCACACGACGTTCG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNTHQQ*ISTRRS
Trigger: CGAACGTCGTGTGGAAATGCATTGCTGGTGGGTGTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAGTGCAGGTTTAGCTaGCTCAAGCTTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQCRFS*LKLAFS
Trigger: GCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTATCCAGCTCAGCTTaGTTCTCATCCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLSSSA*FSSSRA
Trigger: AGCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGAGTGGAGGCGGCCTaGATCTTTTTCCGGCACGTA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRVEAA*IFFRHV
Trigger: TACGTGCCGGAAAAAGATGCAGGCCGCCTCCACTCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGTTCTTTTCAAACCTaGGCGTACACCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSCSFQT*AYTLGW
Trigger: CCACCCCAAGGTGTACGCGCAGGTTTGAAAAGAACA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGTTCTTTTCAAACCTaGGCGTACACCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCSFQT*AYTLGW
Trigger: CCACCCCAAGGTGTACGCGCAGGTTTGAAAAGAACA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGGAGCACGGGTAACTaGGTGAAGAGTACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMWSTGN*VKSTLG
Trigger: CCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTATGTGGGTTCTGGTaGCCTGAGCAGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLCGFW*PEQMEM
Trigger: CATTTCCATCTGCTCAGGGCACCAGAACCCACATAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACATCTTCCATGCCTTaGCCTCGATGGATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTSSMP*PRWIRP
Trigger: TGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAGTCCAACCTGTGCTaGAAAGTGGCTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKSNLC*KVAEEW
Trigger: CCATTCCTCAGCCACTTTCCAGCACAGGTTGGACTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCTTTCCAGAACCACTaGGCCCAAGAGTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSFQNH*AQESSS
Trigger: GCTTGATGACTCTTGGGCCCAGTGGTTCTGGAAAGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATTTTTCTCCCTCCTaGTGGCCCATATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHFSPS*WPICAS
Trigger: GGAAGCACATATGGGCCACCAGGAGGGAGAAAAATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCATTTTTCTCCCTCCTaGTGGCCCATATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSHFSPS*WPICAS
Trigger: GGAAGCACATATGGGCCACCAGGAGGGAGAAAAATG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCCTGCTTGGCCAGGTTaGCCTTCAGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMPAWPG*PSEATL
Trigger: AAGTGTTGCCTCTGAAGGCCAACCTGGCCAAGCAGG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGGGTCTATGAGGAGTaGGTATCTGGTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWWVYEE*VSGGLC
Trigger: ACAAAGGCCACCAGATACCCACTCCTCATAGACCCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGGTCAGATCCCATaGACAGGAAGCATATCAGAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRWGQIP*TGSISE
Trigger: CTCTGATATGCTTCCTGTCCATGGGATCTGACCCCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAACTTCATTGTGGATaGTCACAGTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRELHCG*SQCPVP
Trigger: GGGCACTGGACACTGTGACCATCCACAATGAAGTTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGAACTTCATTGTGGATaGTCACAGTGTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWELHCG*SQCPVP
Trigger: GGGCACTGGACACTGTGACCATCCACAATGAAGTTC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGTCTATGTGGGTTCTaGTGCCCTGAGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCLCGF*CPEQME
Trigger: TTCCATCTGCTCAGGGCACCAGAACCCACATAGACA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGCGTAATGCAACTGTaGAATCTCTCTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSVMQL*NLSDPG
Trigger: GCCTGGATCAGAGAGATTTCACAGTTGCATTACGCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCCGATTCGGTTCCTTTaGGCAGGAGCTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMPIRFL*AGALLF
Trigger: GAAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCTGTGAGTGACTTCTaGCATACTTCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPVSDF*HTSNCS
Trigger: TGAGCAGTTGGAAGTATGTCAGAAGTCACTCACAGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCTGTGAGTGACTTCTaGCATACTTCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPVSDF*HTSNCS
Trigger: TGAGCAGTTGGAAGTATGTCAGAAGTCACTCACAGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCCTTCCTAGGCCTCTaGAATCCATTTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSFLGL*NPFDLS
Trigger: GCTCAGATCAAATGGATTTCAGAGGCCTAGGAAGGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCCTTCCTAGGCCTCTaGAATCCATTTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSFLGL*NPFDLS
Trigger: GCTCAGATCAAATGGATTTCAGAGGCCTAGGAAGGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATTTTGGCTGAAGCCTaGGCGCTTACTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRILAEA*ALTVTS
Trigger: AGAAGTCACAGTAAGCGCTCAGGCTTCAGCCAAAAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGGGCCAATGACGTCTaGTACATGATGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSWANDV*YMMLTM
Trigger: CATGGTCAACATCATGTATCAGACGTCATTGGCCCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGGGCCAATGACGTCTaGTACATGATGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWWANDV*YMMLTM
Trigger: CATGGTCAACATCATGTATCAGACGTCATTGGCCCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCATATCAGCATTAGGGTaGAGCCCAAAGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSISALG*SPKTSG
Trigger: CCCTGAAGTCTTTGGGCTTCACCCTAATGCTGATAT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATATCAGCATTAGGGTaGAGCCCAAAGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRISALG*SPKTSG
Trigger: CCCTGAAGTCTTTGGGCTTCACCCTAATGCTGATAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTTCGGCTTTCCCTTaGCTCTCTAAATCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSSAFP*LSKSCL
Trigger: CAGGCAAGATTTAGAGAGGCAAGGGAAAGCCGAAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCTTCGGCTTTCCCTTaGCTCTCTAAATCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSSAFP*LSKSCL
Trigger: CAGGCAAGATTTAGAGAGGCAAGGGAAAGCCGAAGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCAGAGTATTTTTCCTaGTATAGGGGGCATGTTGCG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPEYFS*YRGHVA
Trigger: CGCAACATGCCCCCTATAGCAGGAAAAATACTCTGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAACACTGTGAGTCCTTaGCTCAACACAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNTVSP*LNTDST
Trigger: GGTGGAATCTGTGTTGAGGCAAGGACTCACAGTGTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATACTGCAGGGAGATaGGGCTGTATGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDTAGR*GCMVWE
Trigger: TTCCCACACCATACAGCCGCATCTCCCTGCAGTATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGATGTTGTCAGATACTaGAGGGAGATGCGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDVVRY*REMRLY
Trigger: ATACAGCCGCATCTCCCTGCAGTATCTGACAACATC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCAGGAACCCGACTGTaGAAGACCTTTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPGTRL*KTFENP
Trigger: AGGATTTTCAAAGGTCTTGCACAGTCGGGTTCCTGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGAGTCATCAAGCCATaGCGTACCAAAGACGTCTCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRVIKP*RTKDVS
Trigger: TGAGACGTCTTTGGTACGGCATGGCTTGATGACTCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGTCATCAAGCCATaGCGTACCAAAGACGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRVIKP*RTKDVS
Trigger: TGAGACGTCTTTGGTACGGCATGGCTTGATGACTCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTGGTGGCCCATATGTaGTTCCAATTCGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLVAHM*FQFAYP
Trigger: TGGATAAGCGAATTGGAAGCACATATGGGCCACCAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTGGTGGCCCATATGTaGTTCCAATTCGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLVAHM*FQFAYP
Trigger: TGGATAAGCGAATTGGAAGCACATATGGGCCACCAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTCACCTTAGTCCATTaGCACAGCACTCTACCCACT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFTLVH*HSTLPT
Trigger: AGTGGGTAGAGTGCTGTGGCAATGGACTAAGGTGAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTTGGGAGTCACATGTaGTCTTCGGCGGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRFGSHM*SSAVSL
Trigger: CAAAGATACCGCCGAAGAGCACATGTGACTCCCAAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTCTGCTTCTTCCAGTaGAGGTTTAGCTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFCFFQ*RFSCLK
Trigger: CTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGATTCAGGGCTGCTTCTaGTTCTTCCAGTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWIQGCF*FFQCRF
Trigger: AAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAAT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATTCAGGGCTGCTTCTaGTTCTTCCAGTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRIQGCF*FFQCRF
Trigger: AAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGATAGTATTCAGGGCTaGTTCTGCTTCTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRDSIQG*FCFFQC
Trigger: GCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACCTCAGCTGCTGTCTaGTTGGTAGTTCGAAGTACA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTSAAV*LVVRST
Trigger: TGTACTTCGAACTACCAAGCAGACAGCAGCTGAGGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTCACTTACCTCAGCTaGTGTCTGCTTGGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFTYLS*CLLGSS
Trigger: CGAACTACCAAGCAGACAGCAGCTGAGGTAAGTGAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCACTTCTTGCCTCATTaGTGTGAGGAAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMHFLPH*CEEALG
Trigger: CCCCAAGGCTTCCTCACAGCAATGAGGCAAGAAGTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATGCCTTGGCCTCGATaGATAAGGCCAATTTCATCG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRMPWPR*IRPISS
Trigger: CGATGAAATTGGCCTTATCCATCGAGGCCAAGGCAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCACCTGAGTCAGCTTaGCTTCGATATCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSPESA*LRYPSP
Trigger: AGGAGAAGGATATCGAAGCCAAGCTGACTCAGGTGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCTGAGGCAGCTGTTTaGCAATATCTCCACCTACAA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPEAAV*QYLHLQ
Trigger: TTGTAGGTGGAGATATTGCCAAACAGCTGCCTCAGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACCTGTGCTGGAAAGTaGCTGAGGAATGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTCAGK*LRNGKS
Trigger: ACTCTTACCATTCCTCAGCCACTTTCCAGCACAGGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCACCGCCTTCTTCTTTaGAGGGAATTAACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWHRLLL*RELTLP
Trigger: TGGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTCGTCTGCTTTTATaGAAGCCACTGCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLRLLL*KPLPTP
Trigger: AGGAGTTGGCAGTGGCTTCCATAAAAGCAGACGAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCCAGCGATAGGGTTTaGGAGGACAGGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSSDRV*EDRLSG
Trigger: ACCTGAAAGCCTGTCCTCCCAAACCCTATCGCTGGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCGTACACCTTGGGGTaGCTCATTAGTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWAYTLG*LISEFE
Trigger: CTCAAATTCACTAATGAGCCACCCCAAGGTGTACGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCTGTGAGGAAGCCTTaGGGATTAAAGAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRAVRKP*GLKKPV
Trigger: GACTGGTTTCTTTAATCCCCAAGGCTTCCTCACAGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTGATGAACAGTTTCTaGGTTGCTGGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLMNSF*VAGCSS
Trigger: ACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGTTATACTGACGGATaGCAGCTTTACCGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCYTDG*QLYRPD
Trigger: GTCCGGACGGTAAAGCTGTCATCCGTCAGTATAACA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAGATCTTGTTATACTaGCGGATGACAGCTTTACCG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSREILLY*RMTALP
Trigger: CGGTAAAGCTGTCATCCGTCAGTATAACAAGATCTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACTGTGAAATCTCTCTaGTCCAGGCTGTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTVKSL*SRLCDR
Trigger: TCTATCACACAGCCTGGATCAGAGAGATTTCACAGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGCTGTTGCCCCCAGTaGGCCACTCCTCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLCCCPQ*ATPLLT
Trigger: GGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGTTTTCCTGTGTTTTaGTGGGTCACGTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSFPVF*WVTSVV
Trigger: CACTACTGACGTGACCCATCAAAACACAGGAAAACT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAACTTTGGCTGCACTTaGACTAGGTCCTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRNFGCT*TRSSCT
Trigger: AGTACAAGAGGACCTAGTTCAAGTGCAGCCAAAGTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAACTTTGGCTGCACTTaGACTAGGTCCTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNFGCT*TRSSCT
Trigger: AGTACAAGAGGACCTAGTTCAAGTGCAGCCAAAGTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCATCGAAACTGGCCTaGAATATCTGTAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSSKLA*NICSLL
Trigger: CAACAGGCTACAGATATTTCAGGCCAGTTTCGATGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCAATTCTCAATCACCTaGGTCAGCTTGGCTTCGATA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSQFSIT*VSLASI
Trigger: TATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAACGTTTTGCTTCCTaGGGCAGCTGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKRFAS*GSCLAI
Trigger: TATTGCCAAACAGCTGCCTCAGGAAGCAAAACGTTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAACGTTTTGCTTCCTaGGGCAGCTGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWKRFAS*GSCLAI
Trigger: TATTGCCAAACAGCTGCCTCAGGAAGCAAAACGTTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTTTTCTCCTTCTCTTaGTATGACGGCCATGATGCG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFFSFS*YDGHDA
Trigger: CGCATCATGGCCGTCATATCAAGAGAAGGAGAAAAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTCCCTGCTCTCCTGTaGGCAAAACAGCTTTATGTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFPALL*AKQLYV
Trigger: AACATAAAGCTGTTTTGCTCACAGGAGAGCAGGGAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCACTCAGCCCATCGATaGGAGTGGAGGCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLHSAHR*EWRRPA
Trigger: TGCAGGCCGCCTCCACTCTCATCGATGGGCTGAGTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCATCCAAGTTTTGCCTTaGGTTTGTGGGTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSIQVLP*VCGSMR
Trigger: CCTCATAGACCCACAAACTCAAGGCAAAACTTGGAT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCAAGAACTGGGCCAATaGCGTCTGATACATGATGTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWQELGQ*RLIHDV
Trigger: AACATCATGTATCAGACGTCATTGGCCCAGTTCTTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTGTCCTTGCCCCATTaGGATAGTTCTACATTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLSLPH*DSSTFQ
Trigger: CTGGAATGTAGAACTATCTCAATGGGGCAAGGACAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACTCTTTTCCAGAGCTaGGGTATACGAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTLFQS*GIRASY
Trigger: GTATGATGCTCGTATACCTCAGCTCTGGAAAAGAGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTTTGCCCCTTTAGTTaGTCCAGCAATAGTTCGACC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRFCPFS*SSNSST
Trigger: GGTCGAACTATTGCTGGAGCAACTAAAGGGGCAAAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAACAGTTTCTGAGTTaGTGGCTGCAGCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSREQFLS*WLQQLL
Trigger: AAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTATTACTATCCAGTTaGAGTCCTGGGAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVLLSS*SPGNRS
Trigger: TGACCTGTTCCCAGGACTGCAACTGGATAGTAATAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGTATTACTATCCAGTTaGAGTCCTGGGAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSVLLSS*SPGNRS
Trigger: TGACCTGTTCCCAGGACTGCAACTGGATAGTAATAC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAACCTGATGGGCTACTaGGTTTTGCAGTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNLMGY*VLQFCI
Trigger: TATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTTCCGCATTCTGTTTaGGCCTTCATTAGAATCGTG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLPHSV*AFIRIV
Trigger: CACGATTCTAATGAAGGCGCAAACAGAATGCGGAAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAACTTGCTTTCATGCTaGCGTAAGAAGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRNLLSC*RKKASS
Trigger: GCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAACTTGCTTTCATGCTaGCGTAAGAAGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNLLSC*RKKASS
Trigger: GCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCCAACTTGCTTTCATaGTGCCGTAAGAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSNLLS*CRKKAS
Trigger: TGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTGGTAAGTCCAACTTaGTTTCATGCTGCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLVSPT*FHAAVR
Trigger: TCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTCCTTCTCCTTGACTaGAAGATCCTGAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLLLLD*KILREF
Trigger: AAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTCCTTCTCCTTGACTaGAAGATCCTGAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLLLLD*KILREF
Trigger: AAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTTTATGGAAGCCACTaGCAACTCCTTCTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFYGSH*QLLLLD
Trigger: GTCAAGGAGAAGGAGTTGGCAGTGGCTTCCATAAAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAGTGCAGGTTTAGCTaGCTCAAGCTTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQCRFS*LKLAFS
Trigger: GCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAGATGTGGTGGTTTTaGAAGTTTCCTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWKMWWF*KFPDCG
Trigger: GCCACAGTCAGGAAACTTGCAAAACCACCACATCTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGGAAAGGAATCCCGTaGACAGCAGAATATCACCTA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRKGIP*TAEYHL
Trigger: TAGGTGATATTCTGCTGTGCACGGGATTCCTTTCCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTTCCGCGGGTGGCTaGGGGCCGGAACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHASAGG*GPELLL
Trigger: CAGGAGGAGTTCCGGCCCGCAGCCACCCGCGGAAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATGTTTCCTGTAGATTaGGAAGGCCACTCATACTCC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRMFPVD*EGHSYS
Trigger: GGAGTATGAGTGGCCTTCCCAATCTACAGGAAACAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGATGTTTCCTGTAGATTaGGAAGGCCACTCATACTCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWMFPVD*EGHSYS
Trigger: GGAGTATGAGTGGCCTTCCCAATCTACAGGAAACAT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCTCCCTGCTTGGACTaGTTTAAAGCACCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSPCLD*FKAPQL
Trigger: CAACTGGGGTGCTTTAAACCAGTCCAAGCAGGGAGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAGATTCTCCCTGCTTaGACTGGTTTAAAGCACCCC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQILPA*TGLKHP
Trigger: GGGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCAGTTTCTGAGTTGCTaGCTGCAGCAGTTACTTCTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWQFLSC*LQQLLL
Trigger: AAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGTCGCACAAAAAGCGTaGCTTGTAAAGCGTAATGCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSVAQKA*LVKRNA
Trigger: TGCATTACGCTTTACAAGCCACGCTTTTTGTGCGAC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCAACTTCCCTGTTTCTaGATGTCGCACAAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSQLPCF*MSHKKR
Trigger: ACGCTTTTTGTGCGACATCCAGAAACAGGGAAGTTG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACCTCCAGGGTTAACTaGATCATACGGTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTSRVN*IIRLMA
Trigger: AGCCATTAACCGTATGATCCAGTTAACCCTGGAGGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCTAGCTTCTTGGGGTaGTATATTTGGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWASFLG*YIWNHR
Trigger: CCTATGGTTCCAAATATACCACCCCAAGAAGCTAGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCTAGCTTCTTGGGGTaGTATATTTGGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRASFLG*YIWNHR
Trigger: CCTATGGTTCCAAATATACCACCCCAAGAAGCTAGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTGTTGCTAGCTTCTTaGGGTGGTATATTTGGAACC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLLLAS*GGIFGT
Trigger: GGTTCCAAATATACCACCCCAAGAAGCTAGCAACAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGGTGTGGGAATCACTaGCTTGTCCAAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSWCGNH*LVQEFP
Trigger: TGGAAATTCTTGGACAAGCCAGTGATTCCCACACCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAGTCCAACCTGTGCTaGAAAGTGGCTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKSNLC*KVAEEW
Trigger: CCATTCCTCAGCCACTTTCCAGCACAGGTTGGACTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGGTTCCAGGGTGGATaGTTAATCAAACCCTCTATC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRFQGG*LIKPSI
Trigger: GATAGAGGGTTTGATTAACCATCCACCCTGGAACCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTTCAGGTTCCAGGGTaGATGGTTAATCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFQVPG*MVNQTL
Trigger: GAGGGTTTGATTAACCATCCACCCTGGAACCTGAAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTCGTGCAAACAAGTTaGAGATCTCCCCTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLVQTS*RSPLKI
Trigger: TATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAAAAACAGTACGGTCTaGGCACCAAGACCTGATAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSKNSTV*APRPDK
Trigger: CTTATCAGGTCTTGGTGCCCAGACCGTACTGTTTTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGGGGTCAGATCCCATaGACAGGAAGCATATCAGAG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMWGQIP*TGSISE
Trigger: CTCTGATATGCTTCCTGTCCATGGGATCTGACCCCA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATGCATCAATTTGATTaGTGGGGTCAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRMHQFD*WGQIPW
Trigger: CCATGGGATCTGACCCCACCAATCAAATTGATGCAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGTGTTCCAATTCAGTaGGTGGACCTGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSVPIQ*VDLNHQ
Trigger: CTGGTGATTCAGGTCCACTCACTGAATTGGAACACT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATTTAGCACATTTATaGCAGCCTTACAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHLAHL*QPYNLA
Trigger: GGCCAAGTTGTAAGGCTGTCATAAATGTGCTAAATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCATTTAGCACATTTATaGCAGCCTTACAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWHLAHL*QPYNLA
Trigger: GGCCAAGTTGTAAGGCTGTCATAAATGTGCTAAATG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTACCTTGACACACCGTaGATCATTCTGATGGCATTA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSYLDTP*IILMAL
Trigger: TAATGCCATCAGAATGATTCACGGTGTGTCAAGGTA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACAACTGGCGTTTCCTaGTCCCATACATGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTTGVS*SHTWFN
Trigger: ATTAAACCATGTATGGGATCAGGAAACGCCAGTTGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCGGTTAATGGCTTGTTaGATGTCATCCAAACTAGGA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRLMAC*MSSKLG
Trigger: TCCTAGTTTGGATGACATTCAACAAGCCATTAACCG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCTTCTGCAGCAAGTTaGGTTCTTTTCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWASAAS*VLFWFC
Trigger: ACAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCTTCTGCAGCAAGTTaGGTTCTTTTCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRASAAS*VLFWFC
Trigger: ACAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAAATACCCTGTGAGTaGCTTCTGACATACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQIPCE*LLTYFQ
Trigger: TTGGAAGTATGTCAGAAGTCACTCACAGGGTATTTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCAAATACCCTGTGAGTaGCTTCTGACATACTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSQIPCE*LLTYFQ
Trigger: TTGGAAGTATGTCAGAAGTCACTCACAGGGTATTTG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTCCAAATACCCTGTaGGTGACTTCTGACATACTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSPNTL*VTSDIL
Trigger: AAGTATGTCAGAAGTCACTCACAGGGTATTTGGAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGAAATGTCACCTCATTaGTGTTGTCAGATACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSEMSPH*CCQILQ
Trigger: CTGCAGTATCTGACAACATCAATGAGGTGACATTTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGGCCTGAGCTAACGTaGTATAGCATCTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRRPELT*YSIYLL
Trigger: TAACAGATAGATGCTATATCACGTTAGCTCAGGCCT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGAAATCCATTTGATCTaGGCAATTGAACACGACCAC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWEIHLI*AIEHDH
Trigger: GTGGTCGTGTTCAATTGCTCAGATCAAATGGATTTC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGAAATCCATTTGATCTaGGCAATTGAACACGACCAC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSEIHLI*AIEHDH
Trigger: GTGGTCGTGTTCAATTGCTCAGATCAAATGGATTTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACTGTGCAAGACCTTTaGAAATCCTTCCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTVQDL*KSFLGL
Trigger: GAGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAAATCAGACCTTGGGTaGTTTCATCCATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSKSDLG*FHPSHL
Trigger: GAGATGAGATGGATGAAATCACCCAAGGTCTGATTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAATCAGACCTTGGGTaGTTTCATCCATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKSDLG*FHPSHL
Trigger: GAGATGAGATGGATGAAATCACCCAAGGTCTGATTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACTTTCACAGCTCTCTaGAACCATGTCATGAAACAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTFTAL*NHVMKQ
Trigger: CTGTTTCATGACATGGTTTCAGAGAGCTGTGAAAGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTGACTGCAAGATCCTaGGAGAGTTTAGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLTARS*ESLATD
Trigger: ATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTGACTGCAAGATCCTaGGAGAGTTTAGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLTARS*ESLATD
Trigger: ATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGATTCAGGTTTTCTGTaGAAGGAATTTTCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDSGFL*KEFSVL
Trigger: GAGCACGGAAAATTCCTTTCACAGAAAACCTGAATC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGATCCAGCTCTTCATaGATGTCCTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGSSSS*MSSMRR
Trigger: CCTTCTCATTGAGGACATTCATGAAGAGCTGGATCC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGCCGGAACTCCTCCTaGGCCGCGTTGATCTTGATC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLGRNSS*AALILI
Trigger: GATCAAGATCAACGCGGCTCAGGAGGAGTTCCGGCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTAACTGTCCCTCTCTaGAGGTCAATCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLTVPL*RSIFKV
Trigger: GACCTTAAAGATTGACCTTCAGAGAGGGACAGTTAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAACACTGTGAGTCCTTaGCTCAACACAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMNTVSP*LNTDST
Trigger: GGTGGAATCTGTGTTGAGGCAAGGACTCACAGTGTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATGTTGTCAGATACTaGAGGGAGATGCGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDVVRY*REMRLY
Trigger: ATACAGCCGCATCTCCCTGCAGTATCTGACAACATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTACAGCAGCTTCCTGTaGAGTGCGTTTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMYSSFL*SAFLQP
Trigger: TGGTTGAAGAAACGCACTGCACAGGAAGCTGCTGTA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGGGTGGATCATTGCTaGTATGAGCTGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRVDHC*YELHIN
Trigger: GTTGATGTGCAGCTCATAGCAGCAATGATCCACCCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGCACGAGTAAGATGTaGATTAAACCACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCTSKM*IKPLLI
Trigger: GATGAGCAGTGGTTTAATGCACATCTTACTCGTGCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGCACGAGTAAGATGTaGATTAAACCACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCTSKM*IKPLLI
Trigger: GATGAGCAGTGGTTTAATGCACATCTTACTCGTGCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATCCATCTCATCTCGTaGAAACAAGTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRIHLIS*KQVGDL
Trigger: GAGATCTCCAACTTGTTTGCACGAGATGAGATGGAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGAAAGGAATTTTCCGTaGTCTCAACTCCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSERNFP*SQLHFP
Trigger: TGGGAAATGGAGTTGAGAGCACGGAAAATTCCTTTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACCTCAGCTGCTGTCTaGTTGGTAGTTCGAAGTACA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTSAAV*LVVRST
Trigger: TGTACTTCGAACTACCAAGCAGACAGCAGCTGAGGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTGATCTCAGTTTCTaGAGCCACATGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLDLSF*SHMQLF
Trigger: GAAAAGTTGCATGTGGCTGCAGAAACTGAGATCAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAGTTTCTTGGCCAATaGATCAATTTGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQFLGQ*INLIGG
Trigger: CCCACCAATCAAATTGATGCATTGGCCAAGAAACTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTACTCCGGCGGTATCTaGAGGACCTCCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLYSGGI*RTSGKT
Trigger: CGTCTTCCCGGAGGTCCTCCAGATACCGCCGGAGTA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGACAGCCTTACAACTTaGCCCTTTAATCTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWDSLTT*PFNLLN
Trigger: ATTGAGCAGATTAAAGGGCCAAGTTGTAAGGCTGTC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTGGGGTGGTATATTTaGAACCATAGGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLGWYI*NHRSFQ
Trigger: TTGGAAGGACCTATGGTTCCAAATATACCACCCCAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACAGATCATCGAAACTaGCCTGAAATATCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTDHRN*PEISVA
Trigger: GGCTACAGATATTTCAGGCCAGTTTCGATGATCTGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACAGATCATCGAAACTaGCCTGAAATATCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTDHRN*PEISVA
Trigger: GGCTACAGATATTTCAGGCCAGTTTCGATGATCTGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCCTGAGGCAGCTGTTTaGCAATATCTCCACCTACAA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMPEAAV*QYLHLQ
Trigger: TTGTAGGTGGAGATATTGCCAAACAGCTGCCTCAGG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATCACCAGTTGGTTCTaGCATCTCACGAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRITSWF*HLTKKI
Trigger: GATTTTCTTCGTGAGATGCCAGAACCAACTGGTGAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAACTTCTCACCAACTaGAGAAAAGCAGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRELLTN*RKAENN
Trigger: GTTGTTCTCTGCTTTTCTCCAGTTGGTGAGAAGTTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGAACTTCTCACCAACTaGAGAAAAGCAGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSELLTN*RKAENN
Trigger: GTTGTTCTCTGCTTTTCTCCAGTTGGTGAGAAGTTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATGAGAGGTAAGATTTaGGAGTCACATGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRMRGKI*ESHVLF
Trigger: GAAGAGCACATGTGACTCCCAAATCTTACCTCTCAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGATGCTTCCGCGGGTaGCTGCGGGCCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGCFRG*LRAGTP
Trigger: AGGAGTTCCGGCCCGCAGCCACCCGCGGAAGCATCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTGACTTTTCAGATCTaGCCATGGACTGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVTFQI*PWTGQI
Trigger: TATTTGACCAGTCCATGGCCAGATCTGAAAAGTCAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGTGACTTTTCAGATCTaGCCATGGACTGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRVTFQI*PWTGQI
Trigger: TATTTGACCAGTCCATGGCCAGATCTGAAAAGTCAC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGATTGGAAATCGATCATaGGGCTCCGTAGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWIGNRS*GSVVIH
Trigger: ATGGATAACTACGGAGCCCCATGATCGATTTCCAAT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATTGGAAATCGATCATaGGGCTCCGTAGTTATCCAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRIGNRS*GSVVIH
Trigger: ATGGATAACTACGGAGCCCCATGATCGATTTCCAAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTGAAGCAATGTAATTaGAAATCGATCATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLKQCN*KSIMGL
Trigger: GAGCCCCATGATCGATTTCCAATTACATTGCTTCAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTGAAGCAATGTAATTaGAAATCGATCATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLKQCN*KSIMGL
Trigger: GAGCCCCATGATCGATTTCCAATTACATTGCTTCAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGGGATGGCAGTGACTaGATGTATTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRDGSD*MYSKYW
Trigger: CCAGTATTTTGAATACATCCAGTCACTGCCATCCCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGGGATGGCAGTGACTaGATGTATTCAAAATACTGG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRDGSD*MYSKYW
Trigger: CCAGTATTTTGAATACATCCAGTCACTGCCATCCCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCTGTGAGGAAGCCTTaGGGATTAAAGAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMAVRKP*GLKKPV
Trigger: GACTGGTTTCTTTAATCCCCAAGGCTTCCTCACAGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGCCTCTTCCTCTTCTaGACGGGGAGGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGLFLF*TGRGSL
Trigger: GAGGCTGCCCCTCCCCGTTCAGAAGAGGAAGAGGCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTCAGTGAGTGGACCTaGATCACCAGCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFSEWT*ITSFFS
Trigger: AGAAAAGAAGCTGGTGATTCAGGTCCACTCACTGAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGAGATCTTGTTATACTaGCGGATGACAGCTTTACCG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMEILLY*RMTALP
Trigger: CGGTAAAGCTGTCATCCGTCAGTATAACAAGATCTC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTGGGGTCATCAGATTaGCAAACACAGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLGSSD*QTQKAL
Trigger: AAGTGCCTTCTGTGTTTGTCAATCTGATGACCCCAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGAAATAATATCTTCTaGCTGCTTTCGCCCATAAAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGNNIF*LLSPIK
Trigger: CTTTATGGGCGAAAGCAGTCAGAAGATATTATTTCC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGTTTTCCTGTGTTTTaGTGGGTCACGTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSFPVF*WVTSVV
Trigger: CACTACTGACGTGACCCATCAAAACACAGGAAAACT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGGTATCAACTGCTTCTaGTTCTTCTTTGGTTACTTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSGINCF*FFFGYF
Trigger: GAAGTAACCAAAGAAGAATCAGAAGCAGTTGATACC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAATTCTCAATCACCTaGGTCAGCTTGGCTTCGATA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQFSIT*VSLASI
Trigger: TATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACATTGGGATTCTCATaGGCTCGCTGCATTATTTTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTLGFS*ARCIIF
Trigger: AAAAATAATGCAGCGAGCTCATGAGAATCCCAATGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAACTGCTCATGTAAATaGGGTAAAAGTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRNCSCK*GKSCPM
Trigger: CATGGGACAACTTTTACCTCATTTACATGAGCAGTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAAATCCTGAATCACTaGTTTGATAGAAAGCGGATC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSREILNH*FDRKRI
Trigger: GATCCGCTTTCTATCAAATCAGTGATTCAGGATTTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGATTGGTCACTTGCATaGTTTTCCTGTCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDWSLA*FSCHLL
Trigger: CAAAAGATGACAGGAAAATCATGCAAGTGACCAATC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATTCGCATTTCTCTATaGGGCCTTCCGCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMIRISL*GLPHSV
Trigger: AACAGAATGCGGAAGGCCTCATAGAGAAATGCGAAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACCCTTCCAGAAGATTaGGAGATTGCACAATATAGT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTLPED*EIAQYS
Trigger: ACTATATTGTGCAATCTCTCAATCTTCTGGAAGGGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACCCTTCCAGAAGATTaGGAGATTGCACAATATAGT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTLPED*EIAQYS
Trigger: ACTATATTGTGCAATCTCTCAATCTTCTGGAAGGGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAAAGAGGCCAATCTTaGAAGACTTTGTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWKRGQS*KTLFSG
Trigger: TCCGGAAAACAAAGTCTTTCAAGATTGGCCTCTTTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAAAGAGGCCAATCTTaGAAGACTTTGTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKRGQS*KTLFSG
Trigger: TCCGGAAAACAAAGTCTTTCAAGATTGGCCTCTTTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCATTTTTAATTTTGGCTaGAGCCTGAGCGCTTACTGT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSIFNFG*SLSAYC
Trigger: ACAGTAAGCGCTCAGGCTTCAGCCAAAATTAAAAAT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGTTTTGCAAGTTTCCTaGCTGTGGCAATATCATTTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSVLQVS*LWQYHL
Trigger: CAAATGATATTGCCACAGTCAGGAAACTTGCAAAAC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTTTTGCAAGTTTCCTaGCTGTGGCAATATCATTTG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVLQVS*LWQYHL
Trigger: CAAATGATATTGCCACAGTCAGGAAACTTGCAAAAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCTTTAATGAGAGCTTaGAACTCTCTGTGCTTAACT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPLMRA*NSLCLT
Trigger: AGTTAAGCACAGAGAGTTTCAAGCTCTCATTAAAGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGATATACTTTCTTGCTTaGAAAACAGTACGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWIYFLA*KTVRSG
Trigger: CCCAGACCGTACTGTTTTTCAAGCAAGAAAGTATAT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACATGGGTAAATTACTaGTGTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTWVNY*CPEGLD
Trigger: ATCAAGACCTTCTGGACATCAGTAATTTACCCATGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAACTGAACACTGGCTaGAAAGTCAGCAGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKLNTG*KVSRIE
Trigger: TTCAATTCTGCTGACTTTTCAGCCAGTGTTCAGTTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCGAACCGTATTCCATaGTACACCTTTCTTAATATC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPNRIP*YTFLNI
Trigger: GATATTAAGAAAGGTGTATCATGGAATACGGTTCGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCGAACCGTATTCCATaGTACACCTTTCTTAATATC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPNRIP*YTFLNI
Trigger: GATATTAAGAAAGGTGTATCATGGAATACGGTTCGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCACTCTCTTTGGGTTaGATGTTGGTAATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPLSLG*MLVIVS
Trigger: TGAAACAATTACCAACATTCAACCCAAAGAGAGTGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGCGGAGTATTGAAATaGCTCTTTGCATTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSCGVLK*LFAFCQ
Trigger: TTGACAGAATGCAAAGAGTCATTTCAATACTCCGCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAGGGAGGAGCCTCTaGTCCCTCAGAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRGRSL*SLRRGA
Trigger: GGCGCCCCTTCTGAGGGAGCAGAGGCTCCTCCCTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTTTCAGATTCTCCCTaGTTGGACTGGTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFSDSP*LDWFKA
Trigger: TGCTTTAAACCAGTCCAAGCAGGGAGAATCTGAAAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGAACAGTTTCTGAGTTaGTGGCTGCAGCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMEQFLS*WLQQLL
Trigger: AAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGCTTCTTTTCTCATCTaGTCACTCTCAATAAGTACC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRASFLI*SLSIST
Trigger: GGTACTTATTGAGAGTGAGCAGATGAGAAAAGAAGC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCTTCTTTTCTCATCTaGTCACTCTCAATAAGTACC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWASFLI*SLSIST
Trigger: GGTACTTATTGAGAGTGAGCAGATGAGAAAAGAAGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTATTGCAGAAGACCCTaGAAATACAGTTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWYCRRP*KYSLSA
Trigger: AGCAGACAAACTGTATTTGCAGGGTCTTCTGCAATA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTGGTAAGTCCAACTTaGTTTCATGCTGCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLVSPT*FHAAVR
Trigger: TCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTTATGGAAGCCACTaGCAACTCCTTCTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFYGSH*QLLLLD
Trigger: GTCAAGGAGAAGGAGTTGGCAGTGGCTTCCATAAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAGATGTGGTGGTTTTaGAAGTTTCCTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKMWWF*KFPDCG
Trigger: GCCACAGTCAGGAAACTTGCAAAACCACCACATCTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGCTGCATCAAATTTTaGCTGTACTTTATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCCIKF*LYFIQL
Trigger: GAGCTGGATAAAGTACAGGCAAAATTTGATGCAGCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAGTTTCTGAGTTGCTaGCTGCAGCAGTTACTTCTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQFLSC*LQQLLL
Trigger: AAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTATTCCATGTGCCATaGAAACTAGGTCATGGTTAT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVFHVP*KLGHGY
Trigger: ATAACCATGACCTAGTTTCCATGGCACATGGAATAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGTATTCCATGTGCCATaGAAACTAGGTCATGGTTAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRVFHVP*KLGHGY
Trigger: ATAACCATGACCTAGTTTCCATGGCACATGGAATAC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATAGGCTTCTTCAATTaGTCCCAAAGTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRIGFFN*SQSHVH
Trigger: ATGGACATGACTTTGGGACCAATTGAAGAAGCCTAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGGTGTGGGAATCACTaGCTTGTCCAAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMWCGNH*LVQEFP
Trigger: TGGAAATTCTTGGACAAGCCAGTGATTCCCACACCA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGGTTCCAGGGTGGATaGTTAATCAAACCCTCTATC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRFQGG*LIKPSI
Trigger: GATAGAGGGTTTGATTAACCATCCACCCTGGAACCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGCGTTCTCGATATTGTaGACTTCAAACAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSAFSIL*TSNRSL
Trigger: TAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACTCCTCAGCTTTTATaGTCAACATTCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTPQLL*STFLAK
Trigger: TTTGGCAAGGAATGTTGACCATAAAAGCTGAGGAGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGGATGCTTCCGCGGGTaGCTGCGGGCCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISGCFRG*LRAGTP
Trigger: AGGAGTTCCGGCCCGCAGCCACCCGCGGAAGCATCC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACAAACAGGAATTTGTaGTTTTCGTATAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTNRNL*FSYRPL
Trigger: CAGAGGCCTATACGAAAACCACAAATTCCTGTTTGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAAAACAGTACGGTCTaGGCACCAAGACCTGATAAG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKNSTV*APRPDK
Trigger: CTTATCAGGTCTTGGTGCCCAGACCGTACTGTTTTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCATCAATTTGATTGGTaGGGTCAGATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMHQFDW*GQIPWT
Trigger: TGTCCATGGGATCTGACCCCACCAATCAAATTGATG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAATTCCAGGCCAAGGTaGCAATTTTGTAGTAATACC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRNSRPR*QFCSNT
Trigger: GGTATTACTACAAAATTGCCACCTTGGCCTGGAATT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTCAGAACTTCATTGTaGATGGTCACAGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLRTSL*MVTVSS
Trigger: ACTGGACACTGTGACCATCCACAATGAAGTTCTGAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACACACATACAGCTTaGGGTCCTTGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDTHTA*GPWVPW
Trigger: CCACGGCACCCAAGGACCCCAAGCTGTATGTGTGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGGTATTATAATACCTTaGCACACCGTGAATCATTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSGIIIP*HTVNHS
Trigger: AGAATGATTCACGGTGTGTCAAGGTATTATAATACC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACTAATTCGACTTCTTaGAAGAAGCTTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTNSTS*KKLSSV
Trigger: AACACTGGAAAGCTTCTTTCAAGAAGTCGAATTAGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCTGTTGCCCCCAGTaGGCCACTCCTCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCCCPQ*ATPLLT
Trigger: GGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTTCCATTGCAAATCTaGCATCATCTAAATCACGAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLPLQI*HHLNHE
Trigger: TTCGTGATTTAGATGATGTCAGATTTGCAATGGAAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTCCATTGCAAATCTaGCATCATCTAAATCACGAA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLPLQI*HHLNHE
Trigger: TTCGTGATTTAGATGATGTCAGATTTGCAATGGAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGGAATGGTAAGAGTTaGAATCCTGAATCACTGATT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWRNGKS*NPESLI
Trigger: AATCAGTGATTCAGGATTTCAACTCTTACCATTCCT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGGCCTGAGCTAACGTaGTATAGCATCTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRPELT*YSIYLL
Trigger: TAACAGATAGATGCTATATCACGTTAGCTCAGGCCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCTGCATTTTGGGATTaGGATTTAGCTTCATATATG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWAAFWD*DLASYM
Trigger: CATATATGAAGCTAAATCTCAATCCCAAAATGCAGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTTTCAATTGTTCTCTaGAACATCATTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLSIVL*NIIGSV
Trigger: CACAGAACCAATGATGTTTCAGAGAACAATTGAAAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTTCAATTGTTCTCTaGAACATCATTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLSIVL*NIIGSV
Trigger: CACAGAACCAATGATGTTTCAGAGAACAATTGAAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATCTCATTAGTTATCTaGTCTCCCCACTCATTAATC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRISLVI*SPHSLI
Trigger: GATTAATGAGTGGGGAGATCAGATAACTAATGAGAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCATCTCATTAGTTATCTaGTCTCCCCACTCATTAATC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSISLVI*SPHSLI
Trigger: GATTAATGAGTGGGGAGATCAGATAACTAATGAGAT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCACATATTTGAGGCTTaGAACTTCTACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWHIFEA*NFYKDQ
Trigger: TTGATCCTTGTAGAAGTTTCAAGCCTCAAATATGTG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACTCAGCCCATCGATaGGAGTGGAGGCGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHSAHR*EWRRPA
Trigger: TGCAGGCCGCCTCCACTCTCATCGATGGGCTGAGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGGATCCACCAACATTaGAATAAGATTCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRIHQH*NKIQVF
Trigger: GAAAACCTGAATCTTATTTCAATGTTGGTGGATCCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACAATAATGCCATTCTaGATTGAGAGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTIMPF*IERSSP
Trigger: AGGAGATGATCTCTCAATTCAGAATGGCATTATTGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACTCTCCTTAGTAACTaGTTCTCAAGTCCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTLLSN*FSSPFI
Trigger: AATGAAAGGACTTGAGAATCAGTTACTAAGGAGAGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTCGAAGTACACCAATaGGAGATTCGTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFEVHQ*EIRHLP
Trigger: TGGTAGATGACGAATCTCTCATTGGTGTACTTCGAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAATCTTTAAGGTCATaGGGAGTACAAACAGGAATT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQSLRS*GVQTGI
Trigger: AATTCCTGTTTGTACTCCTCATGACCTTAAAGATTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAAAGTCAGCAGAATTaGATTCGTAGGGAATATTCC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWKSQQN*IRREYS
Trigger: GGAATATTCCCTACGAATTCAATTCTGCTGACTTTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGTATAAAAGCAGAATaGCGGTTCAAACATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSIKAE*RFKHLL
Trigger: GAGAAGATGTTTGAACCGTCATTCTGCTTTTATACT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCTACTGCGGAGTATTaGAATGACTCTTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMATAEY*NDSLHS
Trigger: AGAATGCAAAGAGTCATTTCAATACTCCGCAGTAGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGGGGGTGGATTCCATaGGCTTCCCATTCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLWGWIP*ASHSVC
Trigger: ACAGACGGAATGGGAAGCTCATGGAATCCACCCCCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCTCTCAGGATCCAGTaGTCCGGGGACAACACTGTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLPLRIQ*SGDNTV
Trigger: AACAGTGTTGTCCCCGGATCACTGGATCCTGAGAGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGAAATGAACTTACTTaGTGTCACACAAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGNELT*CHTKGP
Trigger: TGGCCCTTTTGTGTGACATCAAGTAAGTTCATTTCC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGTATCAGTGATTCTTaGATCCAAATCACGCCAATT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCISDS*IQITPI
Trigger: AATTGGCGTGATTTGGATGCAAGAATCACTGATACA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGTATCAGTGATTCTTaGATCCAAATCACGCCAATT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCISDS*IQITPI
Trigger: AATTGGCGTGATTTGGATGCAAGAATCACTGATACA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCCAGAATGTCATATTaGTTTTTCTTAACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSRMSY*FFLTPW
Trigger: CCAAGGGGTTAAGAAAAAGCAATATGACATTCTGGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTTCATTATCACGTATaGAAGACAAGGCTTCCATTG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFHYHV*KTRLPL
Trigger: CAATGGAAGCCTTGTCTTGCATACGTGATAATGAAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAATCCATACAGCTTCTaGAGCAAGTTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNPYSF*SKLSSF
Trigger: AAAAGAACTCAACTTGCTGCAGAAGCTGTATGGATT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGCGATCATAGTCTTTTaGATGAAATGTCACCTCATT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWAIIVF*MKCHLI
Trigger: AATGAGGTGACATTTCATGCAAAAGACTATGATCGC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGCGATCATAGTCTTTTaGATGAAATGTCACCTCATT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSAIIVF*MKCHLI
Trigger: AATGAGGTGACATTTCATGCAAAAGACTATGATCGC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGCGTTTTGCAGTTCTaGATAAGTATTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCVLQF*ISITIQ
Trigger: CTGGATAGTAATACTTATGCAGAACTGCAAAACGCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGATGGTCAACATTCCTTaGCAAATTCTGGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWMVNIP*QILERS
Trigger: AGATCTTTCCAGAATTTGGCAAGGAATGTTGACCAT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGTTATAAATCTGTCTaGAATTACTCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSYKSV*NYSAAL
Trigger: GAGTGCAGCAGAGTAATTGCAGACAGATTTATAACT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGTTATAAATCTGTCTaGAATTACTCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSYKSV*NYSAAL
Trigger: GAGTGCAGCAGAGTAATTGCAGACAGATTTATAACT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGTGCATTAAACCACTaGTCATCTTCAGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCALNH*SSSGVI
Trigger: TATAACTCCTGAAGATGAGCAGTGGTTTAATGCACA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGATGCCATAAAATATTaGCATAGCAAGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRDAIKY*HSKCPR
Trigger: TCTTGGACACTTGCTATGGCAATATTTTATGGCATC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTGAATTCTTTACTTTaGTGGGTCCACCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLNSLL*WVHRIF
Trigger: AAAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTTGATCTCAGTTTCTaGAGCCACATGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLDLSF*SHMQLF
Trigger: GAAAAGTTGCATGTGGCTGCAGAAACTGAGATCAAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTCCTCCAAAGAATCTaGAATATACTTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLLQRI*NILSCL
Trigger: CAAGCAAGAAAGTATATTGCAGATTCTTTGGAGGAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTCCTCCAAAGAATCTaGAATATACTTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLLQRI*NILSCL
Trigger: CAAGCAAGAAAGTATATTGCAGATTCTTTGGAGGAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAAACCAGCCGCTCTCTaGGCCCCGATGCCCCGACCA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISKPAAL*APMPRP
Trigger: TGGTCGGGGCATCGGGGCCCAGAGAGCGGCTGGTTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCGCTTCATGATCATCTaGAAGAACTATCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRFMII*KNYPFF
Trigger: GAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGTACATCTCCTTCTTaGTACAAAAATTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGTSPS*YKNFSV
Trigger: GACACTGAAATTTTTGTACCAAGAAGGAGATGTACC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTGGGGTGGTATATTTaGAACCATAGGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLGWYI*NHRSFQ
Trigger: TTGGAAGGACCTATGGTTCCAAATATACCACCCCAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGTGTCTCTGTTTCATaGCCTTATTGGTCATCATTT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSVSVS*PYWSSF
Trigger: AAATGATGACCAATAAGGCCATGAAACAGAGACACT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGTGTCTCTGTTTCATaGCCTTATTGGTCATCATTT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSVSVS*PYWSSF
Trigger: AAATGATGACCAATAAGGCCATGAAACAGAGACACT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGCAGTAATGGCTTTTaGATTCATTCGCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCSNGF*IHSHFS
Trigger: AGAGAAATGCGAATGAATCCAAAAGCCATTACTGCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGCAGTAATGGCTTTTaGATTCATTCGCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCSNGF*IHSHFS
Trigger: AGAGAAATGCGAATGAATCCAAAAGCCATTACTGCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCGGAATACTGTCAGTTaGATAATAATAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRNTVS*IIIRLK
Trigger: CTTCAGCCTTATTATTATCCAACTGACAGTATTCCG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAAATTTAGAAGGAGTTaGCAGCATCTTCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRKFRRS*QHLHLS
Trigger: ACTAAGGTGAAGATGCTGCCAACTCCTTCTAAATTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATCTGGCCATGGACTaGTCAAATAACTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDLAMD*SNNFKN
Trigger: GTTCTTGAAGTTATTTGACCAGTCCATGGCCAGATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGATAATTTCCTCCTCTaGAGCATCTTTATCAAACCA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRDNFLL*SIFIKP
Trigger: TGGTTTGATAAAGATGCTCCAGAGGAGGAAATTATC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCAGTTTCAGTTTCTTaGCCAATGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPVSVS*PMHQFD
Trigger: ATCAAATTGATGCATTGGCCAAGAAACTGAAACTGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCAGTTTCAGTTTCTTaGCCAATGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPVSVS*PMHQFD
Trigger: ATCAAATTGATGCATTGGCCAAGAAACTGAAACTGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGTATCAACTGCTTCTaGTTCTTCTTTGGTTACTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGINCF*FFFGYF
Trigger: GAAGTAACCAAAGAAGAATCAGAAGCAGTTGATACC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAACTGCTCATGTAAATaGGGTAAAAGTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMNCSCK*GKSCPM
Trigger: CATGGGACAACTTTTACCTCATTTACATGAGCAGTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGAAATCCTGAATCACTaGTTTGATAGAAAGCGGATC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMEILNH*FDRKRI
Trigger: GATCCGCTTTCTATCAAATCAGTGATTCAGGATTTC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATTGGTCACTTGCATaGTTTTCCTGTCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDWSLA*FSCHLL
Trigger: CAAAAGATGACAGGAAAATCATGCAAGTGACCAATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGCCGGAACTCCTCCTaGGCCGCGTTGATCTTGATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGRNSS*AALILI
Trigger: GATCAAGATCAACGCGGCTCAGGAGGAGTTCCGGCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACCCCAGGGGGTGACGTaGTCTCCTCCTTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISPQGVT*SPPWSV
Trigger: GACAGACCAAGGAGGAGATCACGTCACCCCCTGGGG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAATTTCATCATTTTTaGCCCTTTAGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQFHHF*PFSCSS
Trigger: GCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGAACTGTATCAATATaGATTTCACACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRRTVSI*ISHKSL
Trigger: CAGTGACTTGTGTGAAATGCATATTGATACAGTTCT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATTCTGAAAACGTTTTaGTTCCTGAGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMILKTF*FLRQLF
Trigger: AAACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCACTCTATCAAACTTaGTTAGATCATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSLYQT*LDHVLS
Trigger: AGACAACACATGATCTAAGCAAGTTTGATAGAGTGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTGCACTCCAAGAGCTaGATTTTGGGATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLHSKS*ILGLRF
Trigger: AAATCTCAATCCCAAAATGCAGCTCTTGGAGTGCAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAGAATACACGACGCTaGATCAGAGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKNTRR*IRANIF
Trigger: GAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTAACCGGCCTTCCTaGTTGGCCAGGTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHANRPS*LARLAF
Trigger: GAAGGCCAACCTGGCCAAGCAGGAAGGCCGGTTAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGCTGCATCAAATTTTaGCTGTACTTTATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCCIKF*LYFIQL
Trigger: GAGCTGGATAAAGTACAGGCAAAATTTGATGCAGCA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGTACTTCTTGTCCTTaGCCCATTGAGATAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCTSCP*PIEIVL
Trigger: TAGAACTATCTCAATGGGGCAAGGACAAGAAGTACA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTACTCCGGCGGTATCTaGAGGACCTCCGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYSGGI*RTSGKT
Trigger: CGTCTTCCCGGAGGTCCTCCAGATACCGCCGGAGTA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATAGGCTTCTTCAATTaGTCCCAAAGTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMIGFFN*SQSHVH
Trigger: ATGGACATGACTTTGGGACCAATTGAAGAAGCCTAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAATTTCCAGGAGAACTaGATCAGATACAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNFQEN*IRYKEE
Trigger: TTCTTCTTTGTATCTGATCCAGTTCTCCTGGAAATT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGAGATGCGGCTGTATaGTGTGGGAATCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLGDAAV*CGNHWL
Trigger: AAGCCAGTGATTCCCACACCATACAGCCGCATCTCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTCATCAACCAGTTTaGAAAGGTTCATATCTCTTA +
Preference number: 4 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLHQPV*KGSYLL
Trigger: TAAGAGATATGAACCTTTCCAAACTGGTTGATGAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCGTTCTCGATATTGTaGACTTCAAACAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMAFSIL*TSNRSL
Trigger: TAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCAAAGGTAGGAGGATaGCGAGGTAGCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSKVGG*RGSSLF
Trigger: GAAGAGGGAGCTACCTCGCCATCCTCCTACCTTTGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCTCATAATAAGATGTaGTGGTTTTGCAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSHNKM*WFCKFP
Trigger: AGGAAACTTGCAAAACCACCACATCTTATTATGAGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTAGCATTAATCTCTaGGGTAAAGGCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFSINL*GKGRIW
Trigger: CCAAATCCTGCCTTTACCCCAGAGATTAATGCTAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACAAACAGGAATTTGTaGTTTTCGTATAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTNRNL*FSYRPL
Trigger: CAGAGGCCTATACGAAAACCACAAATTCCTGTTTGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCTGCGCGTACACCTTaGGGTGGCTCATTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLPARTP*GGSLVN
Trigger: ATTCACTAATGAGCCACCCCAAGGTGTACGCGCAGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTATTCAAGGGAAATTaGTACCTACTTGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLFKGN*YLLEGK
Trigger: TTTTCCCTCAAGTAGGTACCAATTTCCCTTGAATAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCGAAATCACTGACTaGACCGGTCGCGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSEITD*TGRGAS
Trigger: GCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACTTCCGAAATCACTaGCTGAACCGGTCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHFRNH*LNRSRC
Trigger: GCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGAGGACATGACTCACTaGAATCATCAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMEDMTH*NHQFSF
Trigger: AAAAGAGAATTGATGATTTCAGTGAGTCATGTCCTC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTGATCTGAGCAATTaGACACGACCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFDLSN*TRPHIF
Trigger: GAAAATATGTGGTCGTGTTCAATTGCTCAGATCAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTCTTAGTCCTCTCATaGCAATGCTTAATTCACTAT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLLVLS*QCLIHY
Trigger: ATAGTGAATTAAGCATTGTCATGAGAGGACTAAGAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCTGCATTTTGGGATTaGGATTTAGCTTCATATATG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMAAFWD*DLASYM
Trigger: CATATATGAAGCTAAATCTCAATCCCAAAATGCAGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCACATATTTGAGGCTTaGAACTTCTACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMHIFEA*NFYKDQ
Trigger: TTGATCCTTGTAGAAGTTTCAAGCCTCAAATATGTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGGATCCACCAACATTaGAATAAGATTCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRIHQH*NKIQVF
Trigger: GAAAACCTGAATCTTATTTCAATGTTGGTGGATCCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACAATAATGCCATTCTaGATTGAGAGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTIMPF*IERSSP
Trigger: AGGAGATGATCTCTCAATTCAGAATGGCATTATTGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACTCTCCTTAGTAACTaGTTCTCAAGTCCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTLLSN*FSSPFI
Trigger: AATGAAAGGACTTGAGAATCAGTTACTAAGGAGAGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGTATAAAAGCAGAATaGCGGTTCAAACATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSIKAE*RFKHLL
Trigger: GAGAAGATGTTTGAACCGTCATTCTGCTTTTATACT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATCCACGTAGAAAACTaGGCATTTCTTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMIHVEN*AFLSKS
Trigger: ACTTTTGGAAAGAAATGCTCAGTTTTCTACGTGGAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCCCGTCGTGCGGAATaGTTTATACTTCGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLPRRAE*FILRNQ
Trigger: CTGGTTTCGAAGTATAAAGCATTCCGCACGACGGGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGAACCGGTCGCGGTaGAAGCCTCTGTCGAACTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLNRSR*KPLSNS
Trigger: AGAGTTCGACAGAGGCTTGCACCGCGACCGGTTCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCCAGAATGTCATATTaGTTTTTCTTAACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSRMSY*FFLTPW
Trigger: CCAAGGGGTTAAGAAAAAGCAATATGACATTCTGGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACAGCTTCTTCCACATaGTTACTTTTGTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTASST*LLLWFR
Trigger: TCTAAACCACAAAAGTAAGCATGTGGAAGAAGCTGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTCATTATCACGTATaGAAGACAAGGCTTCCATTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFHYHV*KTRLPL
Trigger: CAATGGAAGCCTTGTCTTGCATACGTGATAATGAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCAGAAGTCCAACCTGTaGTGGAAAGTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLQKSNL*WKVAEE
Trigger: TTCCTCAGCCACTTTCCAGCACAGGTTGGACTTCTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCCAGGGTGGATCATTaGTGCTATGAGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSRVDH*CYELHI
Trigger: GATGTGCAGCTCATAGCAGCAATGATCCACCCTGGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGTGCATTAAACCACTaGTCATCTTCAGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCALNH*SSSGVI
Trigger: TATAACTCCTGAAGATGAGCAGTGGTTTAATGCACA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAACACCCACCAGCAATaGATTTCCACACGACGTTCG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLNTHQQ*ISTRRS
Trigger: CGAACGTCGTGTGGAAATGCATTGCTGGTGGGTGTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATGCCATAAAATATTaGCATAGCAAGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDAIKY*HSKCPR
Trigger: TCTTGGACACTTGCTATGGCAATATTTTATGGCATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTATCCAGCTCAGCTTaGTTCTCATCCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLSSSA*FSSSRA
Trigger: AGCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTGAATTCTTTACTTTaGTGGGTCCACCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLNSLL*WVHRIF
Trigger: AAAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTTCAGGTCCAGAGCTaGTCCCCCTTTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFQVQS*SPFNES
Trigger: GCTCTCATTAAAGGGGGAGCAGCTCTGGACCTGAAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAATCAACACAGTTTTaGCTATCTCCTTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKSTQF*LSPSEL
Trigger: CAGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACATCTTCCATGCCTTaGCCTCGATGGATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTSSMP*PRWIRP
Trigger: TGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGCAAAACTCAGATTTTaGTTGGTCCAATTCTCAATC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMAKLRF*LVQFSI
Trigger: GATTGAGAATTGGACCAACCAAAATCTGAGTTTTGC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATCAGAGCCTCCCTTaGCCAGCGGCTGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNQSLP*PAAEPV
Trigger: GACTGGTTCAGCCGCTGGCCAAGGGAGGCTCTGATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGGGTCTATGAGGAGTaGGTATCTGGTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLWVYEE*VSGGLC
Trigger: ACAAAGGCCACCAGATACCCACTCCTCATAGACCCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAATTTCTGCAAATTGTaGAAGTTTACTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMNFCKL*KFTQLH
Trigger: GTGGAGCTGAGTAAACTTCCACAATTTGCAGAAATT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATAATTTCCTCCTCTaGAGCATCTTTATCAAACCA +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDNFLL*SIFIKP
Trigger: TGGTTTGATAAAGATGCTCCAGAGGAGGAAATTATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGTCTATGTGGGTTCTaGTGCCCTGAGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLCLCGF*CPEQME
Trigger: TTCCATCTGCTCAGGGCACCAGAACCCACATAGACA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATCCGAAATCACTGACTaGACCGGTCGCGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSEITD*TGRGAS
Trigger: GCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGTGTTCCAATTCAGTaGGTGGACCTGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSVPIQ*VDLNHQ
Trigger: CTGGTGATTCAGGTCCACTCACTGAATTGGAACACT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACTGTGCAAGACCTTTaGAAATCCTTCCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTVQDL*KSFLGL
Trigger: GAGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTCCCTCTTCATCACTaGAATCAGACCTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLPLHH*NQTLGD
Trigger: ATCACCCAAGGTCTGATTTCAGTGATGAAGAGGGAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTTTGGCTGAAGCCTaGGCGCTTACTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLILAEA*ALTVTS
Trigger: AGAAGTCACAGTAAGCGCTCAGGCTTCAGCCAAAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATGAATGTCCTCAATaGGAAGGGGTCGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHECPQ*EGVGPR
Trigger: CCTTGGGCCGACCCCTTCTCATTGAGGACATTCATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGATCCAGCTCTTCATaGATGTCCTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLGSSSS*MSSMRR
Trigger: CCTTCTCATTGAGGACATTCATGAAGAGCTGGATCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTAGTAATTCTTCCATaGATTCCAGGCCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLVILP*IPGQGG
Trigger: GCCACCTTGGCCTGGAATTCATGGAAGAATTACTAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGAACTGTATCAATATaGATTTCACACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRTVSI*ISHKSL
Trigger: CAGTGACTTGTGTGAAATGCATATTGATACAGTTCT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACCTCCCATGTTCATaGCCAAGGCCTGAGCTAACG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHLPCS*PRPELT
Trigger: CGTTAGCTCAGGCCTTGGGCATGAACATGGGAGGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCAGGAACCCGACTGTaGAAGACCTTTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLPGTRL*KTFENP
Trigger: AGGATTTTCAAAGGTCTTGCACAGTCGGGTTCCTGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTACAGCAGCTTCCTGTaGAGTGCGTTTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLYSSFL*SAFLQP
Trigger: TGGTTGAAGAAACGCACTGCACAGGAAGCTGCTGTA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGGGTGGATCATTGCTaGTATGAGCTGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLRVDHC*YELHIN
Trigger: GTTGATGTGCAGCTCATAGCAGCAATGATCCACCCT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTCTGCTTCTTCCAGTaGAGGTTTAGCTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFCFFQ*RFSCLK
Trigger: CTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGATAGTATTCAGGGCTaGTTCTGCTTCTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDSIQG*FCFFQC
Trigger: GCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAGTGGAGGCGGCCTaGATCTTTTTCCGGCACGTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRVEAA*IFFRHV
Trigger: TACGTGCCGGAAAAAGATGCAGGCCGCCTCCACTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTCACTTACCTCAGCTaGTGTCTGCTTGGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFTYLS*CLLGSS
Trigger: CGAACTACCAAGCAGACAGCAGCTGAGGTAAGTGAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAAATTCTGTCCTTCTTaGATCCAGAATGTCATATTG +
Preference number: 4 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMKFCPS*IQNVIL
Trigger: CAATATGACATTCTGGATCCAAGAAGGACAGAATTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACCTGTGCTGGAAAGTaGCTGAGGAATGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTCAGK*LRNGKS
Trigger: ACTCTTACCATTCCTCAGCCACTTTCCAGCACAGGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCACCGCCTTCTTCTTTaGAGGGAATTAACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLHRLLL*RELTLP
Trigger: TGGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCGACCACCTCCAGGGTaGATCATTGCTGCTATGAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRPPPG*IIAAMS
Trigger: GCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAATCAGAGCCTCCCTTaGCCAGCGGCTGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISNQSLP*PAAEPV
Trigger: GACTGGTTCAGCCGCTGGCCAAGGGAGGCTCTGATT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCTGCTTGGCCAGGTTaGCCTTCAGAGGCAACACTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPAWPG*PSEATL
Trigger: AAGTGTTGCCTCTGAAGGCCAACCTGGCCAAGCAGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTAATGGCAAAGATGTaGAGCACGGGTAACTGCGTG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLMAKM*STGNCV
Trigger: CACGCAGTTACCCGTGCTCCACATCTTTGCCATTAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGACACACATACAGCTTaGGGTCCTTGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISDTHTA*GPWVPW
Trigger: CCACGGCACCCAAGGACCCCAAGCTGTATGTGTGTC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTCAGTGAGTGGACCTaGATCACCAGCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFSEWT*ITSFFS
Trigger: AGAAAAGAAGCTGGTGATTCAGGTCCACTCACTGAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATAGTTGAACTTGGCTaGCATGCGTTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIVELG*HAFPVF
Trigger: GAACACTGGAAACGCATGTCAGCCAAGTTCAACTAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTGGGGTCATCAGATTaGCAAACACAGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLGSSD*QTQKAL
Trigger: AAGTGCCTTCTGTGTTTGTCAATCTGATGACCCCAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCGATTCGGTTCCTTTaGGCAGGAGCTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPIRFL*AGALLF
Trigger: GAAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTTTTCTCCTTCTCTTaGTATGACGGCCATGATGCG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFFSFS*YDGHDA
Trigger: CGCATCATGGCCGTCATATCAAGAGAAGGAGAAAAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTCCCTGCTCTCCTGTaGGCAAAACAGCTTTATGTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFPALL*AKQLYV
Trigger: AACATAAAGCTGTTTTGCTCACAGGAGAGCAGGGAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGGAGAGTAGGGATTaGAGCGCACTCCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQESRD*SALLSF
Trigger: AAAGCTGAGGAGTGCGCTTCAATCCCTACTCTCCTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCTTAGGGAACTGCTaGAGGCTCCACAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSLGNC*RLHRNP
Trigger: AGGATTCCTGTGGAGCCTTCAGCAGTTCCCTAAGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAGTTTGTGGGTCTATaGGGAGTGGGTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEFVGL*GVGIWW
Trigger: CCACCAGATACCCACTCCTCATAGACCCACAAACTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGAAACAGCATCTTCTaGGGAAGGAGAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLRNSIF*GRRETI
Trigger: GATGGTTTCTCTCCTTCCGCAGAAGATGCTGTTTCT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATACTGCAGGGAGATaGGGCTGTATGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDTAGR*GCMVWE
Trigger: TTCCCACACCATACAGCCGCATCTCCCTGCAGTATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCCAACTTGCTTTCATaGTGCCGTAAGAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSNLLS*CRKKAS
Trigger: TGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGGAAAGGAATCCCGTaGACAGCAGAATATCACCTA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLRKGIP*TAEYHL
Trigger: TAGGTGATATTCTGCTGTGCACGGGATTCCTTTCCT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGTCGCACAAAAAGCGTaGCTTGTAAAGCGTAATGCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLVAQKA*LVKRNA
Trigger: TGCATTACGCTTTACAAGCCACGCTTTTTGTGCGAC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTGTTGCTAGCTTCTTaGGGTGGTATATTTGGAACC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLLLAS*GGIFGT
Trigger: GGTTCCAAATATACCACCCCAAGAAGCTAGCAACAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCGGCTGTATGGTGTaGGAATCACTGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCGCMV*ESLACP
Trigger: TGGACAAGCCAGTGATTCCCACACCATACAGCCGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGAGATGCGGCTGTATaGTGTGGGAATCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGDAAV*CGNHWL
Trigger: AAGCCAGTGATTCCCACACCATACAGCCGCATCTCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACGACCACCTCCAGGGTaGATCATTGCTGCTATGAGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISRPPPG*IIAAMS
Trigger: GCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCAAAGGTAGGAGGATaGCGAGGTAGCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSKVGG*RGSSLF
Trigger: GAAGAGGGAGCTACCTCGCCATCCTCCTACCTTTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCAGCGATAGGGTTTaGGAGGACAGGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSSDRV*EDRLSG
Trigger: ACCTGAAAGCCTGTCCTCCCAAACCCTATCGCTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGATGAACAGTTTCTaGGTTGCTGGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLMNSF*VAGCSS
Trigger: ACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTACCTTGACACACCGTaGATCATTCTGATGGCATTA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLYLDTP*IILMAL
Trigger: TAATGCCATCAGAATGATTCACGGTGTGTCAAGGTA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGTTATACTGACGGATaGCAGCTTTACCGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCYTDG*QLYRPD
Trigger: GTCCGGACGGTAAAGCTGTCATCCGTCAGTATAACA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCGGTTAATGGCTTGTTaGATGTCATCCAAACTAGGA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLRLMAC*MSSKLG
Trigger: TCCTAGTTTGGATGACATTCAACAAGCCATTAACCG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAGTCTTGTACTTCTaGAAGTCCTGCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRVLYF*KSCRAS
Trigger: TGAGGCCCTGCAGGACTTTCAGAAGTACAAGACTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCATTGTATCTGTTGCTaGGTAAAGACCCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLHCICC*VKTLRP
Trigger: TGGTCTTAGGGTCTTTACTCAGCAACAGATACAATG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCTCCAAATACCCTGTaGGTGACTTCTGACATACTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSPNTL*VTSDIL
Trigger: AAGTATGTCAGAAGTCACTCACAGGGTATTTGGAGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGAAATGTCACCTCATTaGTGTTGTCAGATACTGCAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLEMSPH*CCQILQ
Trigger: CTGCAGTATCTGACAACATCAATGAGGTGACATTTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACAATATTATAGTCTaGAAGGAAGTAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDNIIV*KEVGGH
Trigger: GTGGCCTCCTACTTCCTTTCAGACTATAATATTGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACTTTCACAGCTCTCTaGAACCATGTCATGAAACAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTFTAL*NHVMKQ
Trigger: CTGTTTCATGACATGGTTTCAGAGAGCTGTGAAAGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCAACTCCTTCTCCTTaGCTGCAAGATCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPTPSP*LQDPER
Trigger: TCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATCCTTAGGGAACTGCTaGAGGCTCCACAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSLGNC*RLHRNP
Trigger: AGGATTCCTGTGGAGCCTTCAGCAGTTCCCTAAGGA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGAGTTTGTGGGTCTATaGGGAGTGGGTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISEFVGL*GVGIWW
Trigger: CCACCAGATACCCACTCCTCATAGACCCACAAACTC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTCGAAGTACACCAATaGGAGATTCGTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLFEVHQ*EIRHLP
Trigger: TGGTAGATGACGAATCTCTCATTGGTGTACTTCGAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCCAATGCATCAATTTaGTTGGTGGGGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHANASI*LVGSDP
Trigger: GGGATCTGACCCCACCAATCAAATTGATGCATTGGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGAAATGAACTTACTTaGTGTCACACAAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLGNELT*CHTKGP
Trigger: TGGCCCTTTTGTGTGACATCAAGTAAGTTCATTTCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTCCATCCCCCGTCGTaGGGAATGCTTTATACTTCG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLHPPS*GMLYTS
Trigger: CGAAGTATAAAGCATTCCGCACGACGGGGGATGGAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGAAGTCCAACCTGTaGTGGAAAGTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQKSNL*WKVAEE
Trigger: TTCCTCAGCCACTTTCCAGCACAGGTTGGACTTCTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCAGGGTGGATCATTaGTGCTATGAGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSRVDH*CYELHI
Trigger: GATGTGCAGCTCATAGCAGCAATGATCCACCCTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACACCCACCAGCAATaGATTTCCACACGACGTTCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNTHQQ*ISTRRS
Trigger: CGAACGTCGTGTGGAAATGCATTGCTGGTGGGTGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATCCATCTCATCTCGTaGAAACAAGTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIHLIS*KQVGDL
Trigger: GAGATCTCCAACTTGTTTGCACGAGATGAGATGGAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGTGCAGGTTTAGCTaGCTCAAGCTTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQCRFS*LKLAFS
Trigger: GCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTATCCAGCTCAGCTTaGTTCTCATCCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLSSSA*FSSSRA
Trigger: AGCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGTTTCTGCAGCCACATaGAACTTTTCACTTACCTCA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLVSAAT*NFSLTS
Trigger: TGAGGTAAGTGAAAAGTTGCATGTGGCTGCAGAAAC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTCAGGTCCAGAGCTaGTCCCCCTTTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFQVQS*SPFNES
Trigger: GCTCTCATTAAAGGGGGAGCAGCTCTGGACCTGAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCAGTTTCTTGGCCAATaGATCAATTTGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLQFLGQ*INLIGG
Trigger: CCCACCAATCAAATTGATGCATTGGCCAAGAAACTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTCCCTGCTTGGACTaGTTTAAAGCACCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSPCLD*FKAPQL
Trigger: CAACTGGGGTGCTTTAAACCAGTCCAAGCAGGGAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGATTCTCCCTGCTTaGACTGGTTTAAAGCACCCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQILPA*TGLKHP
Trigger: GGGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACAGCCTTACAACTTaGCCCTTTAATCTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDSLTT*PFNLLN
Trigger: ATTGAGCAGATTAAAGGGCCAAGTTGTAAGGCTGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACATCTTCCATGCCTTaGCCTCGATGGATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTSSMP*PRWIRP
Trigger: TGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAGTCCAACCTGTGCTaGAAAGTGGCTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKSNLC*KVAEEW
Trigger: CCATTCCTCAGCCACTTTCCAGCACAGGTTGGACTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTTTCCAGAACCACTaGGCCCAAGAGTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSFQNH*AQESSS
Trigger: GCTTGATGACTCTTGGGCCCAGTGGTTCTGGAAAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATTTTTCTCCCTCCTaGTGGCCCATATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHFSPS*WPICAS
Trigger: GGAAGCACATATGGGCCACCAGGAGGGAGAAAAATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATCACCAGTTGGTTCTaGCATCTCACGAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLITSWF*HLTKKI
Trigger: GATTTTCTTCGTGAGATGCCAGAACCAACTGGTGAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATCAAAGGTAGGAGGATaGCGAGGTAGCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSKVGG*RGSSLF
Trigger: GAAGAGGGAGCTACCTCGCCATCCTCCTACCTTTGA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGGTCTATGAGGAGTaGGTATCTGGTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWVYEE*VSGGLC
Trigger: ACAAAGGCCACCAGATACCCACTCCTCATAGACCCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGATCTGGCCATGGACTaGTCAAATAACTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLDLAMD*SNNFKN
Trigger: GTTCTTGAAGTTATTTGACCAGTCCATGGCCAGATC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGGGTCAGATCCCATaGACAGGAAGCATATCAGAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWGQIP*TGSISE
Trigger: CTCTGATATGCTTCCTGTCCATGGGATCTGACCCCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTGTTCCAATTCAGTaGGTGGACCTGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSVPIQ*VDLNHQ
Trigger: CTGGTGATTCAGGTCCACTCACTGAATTGGAACACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCATTTGCTGTATCAGTaGTTCTTGCATCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLHLLYQ*FLHPNH
Trigger: GTGATTTGGATGCAAGAATCACTGATACAGCAAATG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGCGTAATGCAACTGTaGAATCTCTCTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSVMQL*NLSDPG
Trigger: GCCTGGATCAGAGAGATTTCACAGTTGCATTACGCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGAAATAATATCTTCTaGCTGCTTTCGCCCATAAAG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLGNNIF*LLSPIK
Trigger: CTTTATGGGCGAAAGCAGTCAGAAGATATTATTTCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACATTGGGATTCTCATaGGCTCGCTGCATTATTTTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTLGFS*ARCIIF
Trigger: AAAAATAATGCAGCGAGCTCATGAGAATCCCAATGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCTGTGAGTGACTTCTaGCATACTTCCAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPVSDF*HTSNCS
Trigger: TGAGCAGTTGGAAGTATGTCAGAAGTCACTCACAGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCTTCCTAGGCCTCTaGAATCCATTTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSFLGL*NPFDLS
Trigger: GCTCAGATCAAATGGATTTCAGAGGCCTAGGAAGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTGTGCAAGACCTTTaGAAATCCTTCCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTVQDL*KSFLGL
Trigger: GAGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTCCCTCTTCATCACTaGAATCAGACCTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLPLHH*NQTLGD
Trigger: ATCACCCAAGGTCTGATTTCAGTGATGAAGAGGGAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTTTGGCTGAAGCCTaGGCGCTTACTGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHILAEA*ALTVTS
Trigger: AGAAGTCACAGTAAGCGCTCAGGCTTCAGCCAAAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTTTTAATTTTGGCTaGAGCCTGAGCGCTTACTGT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIFNFG*SLSAYC
Trigger: ACAGTAAGCGCTCAGGCTTCAGCCAAAATTAAAAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGATCCAGCTCTTCATaGATGTCCTCAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGSSSS*MSSMRR
Trigger: CCTTCTCATTGAGGACATTCATGAAGAGCTGGATCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGGCCAATGACGTCTaGTACATGATGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWANDV*YMMLTM
Trigger: CATGGTCAACATCATGTATCAGACGTCATTGGCCCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCTTTAATGAGAGCTTaGAACTCTCTGTGCTTAACT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLPLMRA*NSLCLT
Trigger: AGTTAAGCACAGAGAGTTTCAAGCTCTCATTAAAGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGCCAATGCATCAATTTaGTTGGTGGGGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISANASI*LVGSDP
Trigger: GGGATCTGACCCCACCAATCAAATTGATGCATTGGC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACATGGGTAAATTACTaGTGTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTWVNY*CPEGLD
Trigger: ATCAAGACCTTCTGGACATCAGTAATTTACCCATGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGCGGAGTATTGAAATaGCTCTTTGCATTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLCGVLK*LFAFCQ
Trigger: TTGACAGAATGCAAAGAGTCATTTCAATACTCCGCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTTCGGCTTTCCCTTaGCTCTCTAAATCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSSAFP*LSKSCL
Trigger: CAGGCAAGATTTAGAGAGGCAAGGGAAAGCCGAAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCAGAGTATTTTTCCTaGTATAGGGGGCATGTTGCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPEYFS*YRGHVA
Trigger: CGCAACATGCCCCCTATAGCAGGAAAAATACTCTGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACACTGTGAGTCCTTaGCTCAACACAGATTCCACC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNTVSP*LNTDST
Trigger: GGTGGAATCTGTGTTGAGGCAAGGACTCACAGTGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTCTGAAAACGTTTTaGTTCCTGAGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLILKTF*FLRQLF
Trigger: AAACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATGTTGTCAGATACTaGAGGGAGATGCGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDVVRY*REMRLY
Trigger: ATACAGCCGCATCTCCCTGCAGTATCTGACAACATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCAGGAACCCGACTGTaGAAGACCTTTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPGTRL*KTFENP
Trigger: AGGATTTTCAAAGGTCTTGCACAGTCGGGTTCCTGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAGTCATCAAGCCATaGCGTACCAAAGACGTCTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRVIKP*RTKDVS
Trigger: TGAGACGTCTTTGGTACGGCATGGCTTGATGACTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTACAGCAGCTTCCTGTaGAGTGCGTTTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYSSFL*SAFLQP
Trigger: TGGTTGAAGAAACGCACTGCACAGGAAGCTGCTGTA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTGCACTCCAAGAGCTaGATTTTGGGATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLHSKS*ILGLRF
Trigger: AAATCTCAATCCCAAAATGCAGCTCTTGGAGTGCAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGGTGGCCCATATGTaGTTCCAATTCGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLVAHM*FQFAYP
Trigger: TGGATAAGCGAATTGGAAGCACATATGGGCCACCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTGCTGCTATGAGCTaGACATCAACAATAGTAGTG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIAAMS*TSTIVV
Trigger: CACTACTATTGTTGATGTGCAGCTCATAGCAGCAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGGTGGATCATTGCTaGTATGAGCTGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRVDHC*YELHIN
Trigger: GTTGATGTGCAGCTCATAGCAGCAATGATCCACCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCACCTTAGTCCATTaGCACAGCACTCTACCCACT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFTLVH*HSTLPT
Trigger: AGTGGGTAGAGTGCTGTGGCAATGGACTAAGGTGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAAGAATACACGACGCTaGATCAGAGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLKNTRR*IRANIF
Trigger: GAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTGGGAGTCACATGTaGTCTTCGGCGGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFGSHM*SSAVSL
Trigger: CAAAGATACCGCCGAAGAGCACATGTGACTCCCAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCTGCTTCTTCCAGTaGAGGTTTAGCTGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFCFFQ*RFSCLK
Trigger: CTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTCAGGGCTGCTTCTaGTTCTTCCAGTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIQGCF*FFQCRF
Trigger: AAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATAGTATTCAGGGCTaGTTCTGCTTCTTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDSIQG*FCFFQC
Trigger: GCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACCTCAGCTGCTGTCTaGTTGGTAGTTCGAAGTACA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTSAAV*LVVRST
Trigger: TGTACTTCGAACTACCAAGCAGACAGCAGCTGAGGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCACTTACCTCAGCTaGTGTCTGCTTGGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFTYLS*CLLGSS
Trigger: CGAACTACCAAGCAGACAGCAGCTGAGGTAAGTGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTTCAGGTCCAGAGCTaGTCCCCCTTTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISFQVQS*SPFNES
Trigger: GCTCTCATTAAAGGGGGAGCAGCTCTGGACCTGAAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGTACTTCTTGTCCTTaGCCCATTGAGATAGTTCTA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLCTSCP*PIEIVL
Trigger: TAGAACTATCTCAATGGGGCAAGGACAAGAAGTACA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGCCTTGGCCTCGATaGATAAGGCCAATTTCATCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMPWPR*IRPISS
Trigger: CGATGAAATTGGCCTTATCCATCGAGGCCAAGGCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCACCTGAGTCAGCTTaGCTTCGATATCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSPESA*LRYPSP
Trigger: AGGAGAAGGATATCGAAGCCAAGCTGACTCAGGTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCTGAGGCAGCTGTTTaGCAATATCTCCACCTACAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPEAAV*QYLHLQ
Trigger: TTGTAGGTGGAGATATTGCCAAACAGCTGCCTCAGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACCTGTGCTGGAAAGTaGCTGAGGAATGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTCAGK*LRNGKS
Trigger: ACTCTTACCATTCCTCAGCCACTTTCCAGCACAGGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATCTTTCCAGAACCACTaGGCCCAAGAGTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSFQNH*AQESSS
Trigger: GCTTGATGACTCTTGGGCCCAGTGGTTCTGGAAAGA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACCGCCTTCTTCTTTaGAGGGAATTAACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHRLLL*RELTLP
Trigger: TGGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACTCCTCAGCTTTTATaGTCAACATTCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLTPQLL*STFLAK
Trigger: TTTGGCAAGGAATGTTGACCATAAAAGCTGAGGAGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCGTCTGCTTTTATaGAAGCCACTGCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLRLLL*KPLPTP
Trigger: AGGAGTTGGCAGTGGCTTCCATAAAAGCAGACGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTACATTATCCAAGGCTaGATCCAGCTCTTCATGAAT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLYIIQG*IQLFMN
Trigger: ATTCATGAAGAGCTGGATCCAGCCTTGGATAATGTA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAATTCCAGGCCAAGGTaGCAATTTTGTAGTAATACC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLNSRPR*QFCSNT
Trigger: GGTATTACTACAAAATTGCCACCTTGGCCTGGAATT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCTTCAGAAGGAATaGGATCCCGATAATCCACCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLQKE*DPDNPP
Trigger: TGGTGGATTATCGGGATCTCATTCCTTCTGAAGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCAGTGAGTGGACCTaGATCACCAGCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFSEWT*ITSFFS
Trigger: AGAAAAGAAGCTGGTGATTCAGGTCCACTCACTGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATAGTTGAACTTGGCTaGCATGCGTTTCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIVELG*HAFPVF
Trigger: GAACACTGGAAACGCATGTCAGCCAAGTTCAACTAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAGATCTTGTTATACTaGCGGATGACAGCTTTACCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEILLY*RMTALP
Trigger: CGGTAAAGCTGTCATCCGTCAGTATAACAAGATCTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTGTGAAATCTCTCTaGTCCAGGCTGTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTVKSL*SRLCDR
Trigger: TCTATCACACAGCCTGGATCAGAGAGATTTCACAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAGCGTAATGCAACTGTaGAATCTCTCTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSVMQL*NLSDPG
Trigger: GCCTGGATCAGAGAGATTTCACAGTTGCATTACGCT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGGGGTCATCAGATTaGCAAACACAGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLGSSD*QTQKAL
Trigger: AAGTGCCTTCTGTGTTTGTCAATCTGATGACCCCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTGTGTATGTCTCATTaGGGGTCAACATATCTTCTA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLCMSH*GSTYLL
Trigger: TAGAAGATATGTTGACCCTCAATGAGACATACACAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTTTTCCTGTGTTTTaGTGGGTCACGTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSFPVF*WVTSVV
Trigger: CACTACTGACGTGACCCATCAAAACACAGGAAAACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACTTTGGCTGCACTTaGACTAGGTCCTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNFGCT*TRSSCT
Trigger: AGTACAAGAGGACCTAGTTCAAGTGCAGCCAAAGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCATCGAAACTGGCCTaGAATATCTGTAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSSKLA*NICSLL
Trigger: CAACAGGCTACAGATATTTCAGGCCAGTTTCGATGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGAGGACATGACTCACTaGAATCATCAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLEDMTH*NHQFSF
Trigger: AAAAGAGAATTGATGATTTCAGTGAGTCATGTCCTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAATTCTCAATCACCTaGGTCAGCTTGGCTTCGATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFSIT*VSLASI
Trigger: TATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAACGTTTTGCTTCCTaGGGCAGCTGTTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKRFAS*GSCLAI
Trigger: TATTGCCAAACAGCTGCCTCAGGAAGCAAAACGTTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTTTCTCCTTCTCTTaGTATGACGGCCATGATGCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFFSFS*YDGHDA
Trigger: CGCATCATGGCCGTCATATCAAGAGAAGGAGAAAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTCGCATTTCTCTATaGGGCCTTCCGCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIRISL*GLPHSV
Trigger: AACAGAATGCGGAAGGCCTCATAGAGAAATGCGAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATACATGGTTTGATTTaGGCCTTTAGGTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIHGLI*AFRYFW
Trigger: CCAGAAATACCTAAAGGCTCAAATCAAACCATGTAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCCCTGCTCTCCTGTaGGCAAAACAGCTTTATGTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFPALL*AKQLYV
Trigger: AACATAAAGCTGTTTTGCTCACAGGAGAGCAGGGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCCAAGTTTTGCCTTaGGTTTGTGGGTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIQVLP*VCGSMR
Trigger: CCTCATAGACCCACAAACTCAAGGCAAAACTTGGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAAGAACTGGGCCAATaGCGTCTGATACATGATGTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQELGQ*RLIHDV
Trigger: AACATCATGTATCAGACGTCATTGGCCCAGTTCTTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCAATCTTTAAGGTCATaGGGAGTACAAACAGGAATT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLQSLRS*GVQTGI
Trigger: AATTCCTGTTTGTACTCCTCATGACCTTAAAGATTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGTCCTTGCCCCATTaGGATAGTTCTACATTCCAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLSLPH*DSSTFQ
Trigger: CTGGAATGTAGAACTATCTCAATGGGGCAAGGACAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTAGTAATTCTTCCATaGATTCCAGGCCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLVILP*IPGQGG
Trigger: GCCACCTTGGCCTGGAATTCATGGAAGAATTACTAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATGTCCAGAAGGTCTTaGTTAATTCCAGCAAATGTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLMSRRS*LIPANV
Trigger: AACATTTGCTGGAATTAATCAAGACCTTCTGGACAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATCCACGTAGAAAACTaGGCATTTCTTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIHVEN*AFLSKS
Trigger: ACTTTTGGAAAGAAATGCTCAGTTTTCTACGTGGAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACATACCTGCTGCATTaGCATCTGAATCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTYLLH*HLNQLS
Trigger: CGAAAGCTGATTCAGATGTCAATGCAGCAGGTATGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAAACAGCATCTTCTaGGGAAGGAGAGAAACCATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRNSIF*GRRETI
Trigger: GATGGTTTCTCTCCTTCCGCAGAAGATGCTGTTTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTTGCCCCTTTAGTTaGTCCAGCAATAGTTCGACC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFCPFS*SSNSST
Trigger: GGTCGAACTATTGCTGGAGCAACTAAAGGGGCAAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAACAGTTTCTGAGTTaGTGGCTGCAGCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEQFLS*WLQQLL
Trigger: AAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACCAGAGTATTTTTCCTaGTATAGGGGGCATGTTGCG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISPEYFS*YRGHVA
Trigger: CGCAACATGCCCCCTATAGCAGGAAAAATACTCTGG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTATTACTATCCAGTTaGAGTCCTGGGAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVLLSS*SPGNRS
Trigger: TGACCTGTTCCCAGGACTGCAACTGGATAGTAATAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACCTGATGGGCTACTaGGTTTTGCAGTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNLMGY*VLQFCI
Trigger: TATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCCGCATTCTGTTTaGGCCTTCATTAGAATCGTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLPHSV*AFIRIV
Trigger: CACGATTCTAATGAAGGCGCAAACAGAATGCGGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTGCACAATATAGTTaGACTCCAAGAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLIAQYS*TPRAAF
Trigger: AAATGCAGCTCTTGGAGTGCAACTATATTGTGCAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACTTGCTTTCATGCTaGCGTAAGAAGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNLLSC*RKKASS
Trigger: GCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCAACTTGCTTTCATaGTGCCGTAAGAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSNLLS*CRKKAS
Trigger: TGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGGTAAGTCCAACTTaGTTTCATGCTGCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLVSPT*FHAAVR
Trigger: TCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATGGTCAACATTCCTTaGCAAATTCTGGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLMVNIP*QILERS
Trigger: AGATCTTTCCAGAATTTGGCAAGGAATGTTGACCAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTTGGGAGTCACATGTaGTCTTCGGCGGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISFGSHM*SSAVSL
Trigger: CAAAGATACCGCCGAAGAGCACATGTGACTCCCAAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTCCTTCTCCTTGACTaGAAGATCCTGAGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLLLD*KILREF
Trigger: AAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTTATGGAAGCCACTaGCAACTCCTTCTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFYGSH*QLLLLD
Trigger: GTCAAGGAGAAGGAGTTGGCAGTGGCTTCCATAAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAGATGTGGTGGTTTTaGAAGTTTCCTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKMWWF*KFPDCG
Trigger: GCCACAGTCAGGAAACTTGCAAAACCACCACATCTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGAAAGGAATCCCGTaGACAGCAGAATATCACCTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRKGIP*TAEYHL
Trigger: TAGGTGATATTCTGCTGTGCACGGGATTCCTTTCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGTTTCCTGTAGATTaGGAAGGCCACTCATACTCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMFPVD*EGHSYS
Trigger: GGAGTATGAGTGGCCTTCCCAATCTACAGGAAACAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGTTTCTGAGTTGCTaGCTGCAGCAGTTACTTCTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFLSC*LQQLLL
Trigger: AAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTCGCACAAAAAGCGTaGCTTGTAAAGCGTAATGCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVAQKA*LVKRNA
Trigger: TGCATTACGCTTTACAAGCCACGCTTTTTGTGCGAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAACTTCCCTGTTTCTaGATGTCGCACAAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQLPCF*MSHKKR
Trigger: ACGCTTTTTGTGCGACATCCAGAAACAGGGAAGTTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAAATCAACACAGTTTTaGCTATCTCCTTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLKSTQF*LSPSEL
Trigger: CAGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACCTCCAGGGTTAACTaGATCATACGGTTAATGGCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTSRVN*IIRLMA
Trigger: AGCCATTAACCGTATGATCCAGTTAACCCTGGAGGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATGCCTTGGCCTCGATaGATAAGGCCAATTTCATCG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISMPWPR*IRPISS
Trigger: CGATGAAATTGGCCTTATCCATCGAGGCCAAGGCAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTAGCTTCTTGGGGTaGTATATTTGGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHASFLG*YIWNHR
Trigger: CCTATGGTTCCAAATATACCACCCCAAGAAGCTAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGTTGCTAGCTTCTTaGGGTGGTATATTTGGAACC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLLAS*GGIFGT
Trigger: GGTTCCAAATATACCACCCCAAGAAGCTAGCAACAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAACTCAGATTTTGGTTaGTCCAATTCTCAATCACCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLNSDFG*SNSQSP
Trigger: AGGTGATTGAGAATTGGACCAACCAAAATCTGAGTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGCAAAACTCAGATTTTaGTTGGTCCAATTCTCAATC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLAKLRF*LVQFSI
Trigger: GATTGAGAATTGGACCAACCAAAATCTGAGTTTTGC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGTGTGGGAATCACTaGCTTGTCCAAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWCGNH*LVQEFP
Trigger: TGGAAATTCTTGGACAAGCCAGTGATTCCCACACCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGTTCCAGGGTGGATaGTTAATCAAACCCTCTATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRFQGG*LIKPSI
Trigger: GATAGAGGGTTTGATTAACCATCCACCCTGGAACCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTCAGGTTCCAGGGTaGATGGTTAATCAAACCCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFQVPG*MVNQTL
Trigger: GAGGGTTTGATTAACCATCCACCCTGGAACCTGAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTCGTGCAAACAAGTTaGAGATCTCCCCTGAAGATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLVQTS*RSPLKI
Trigger: TATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTTCGTCTGCTTTTATaGAAGCCACTGCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLRLLL*KPLPTP
Trigger: AGGAGTTGGCAGTGGCTTCCATAAAAGCAGACGAAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCATAATAAGATGTGGTaGTTTTGCAAGTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLHNKMW*FCKFPD
Trigger: GTCAGGAAACTTGCAAAACCACCACATCTTATTATG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAAAACAGTACGGTCTaGGCACCAAGACCTGATAAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKNSTV*APRPDK
Trigger: CTTATCAGGTCTTGGTGCCCAGACCGTACTGTTTTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATCAATTTGATTGGTaGGGTCAGATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHQFDW*GQIPWT
Trigger: TGTCCATGGGATCTGACCCCACCAATCAAATTGATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGCATCAATTTGATTaGTGGGGTCAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMHQFD*WGQIPW
Trigger: CCATGGGATCTGACCCCACCAATCAAATTGATGCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTTCTTCAGAAGGAATaGGATCCCGATAATCCACCA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLLQKE*DPDNPP
Trigger: TGGTGGATTATCGGGATCTCATTCCTTCTGAAGAAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCAGATCCGCTTCATaGTCATCTGGAAGAACTATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFRSAS*SSGRTI
Trigger: GATAGTTCTTCCAGATGATCATGAAGCGGATCTGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATTTAGCACATTTATaGCAGCCTTACAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHLAHL*QPYNLA
Trigger: GGCCAAGTTGTAAGGCTGTCATAAATGTGCTAAATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTACCTTGACACACCGTaGATCATTCTGATGGCATTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYLDTP*IILMAL
Trigger: TAATGCCATCAGAATGATTCACGGTGTGTCAAGGTA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAACTGGCGTTTCCTaGTCCCATACATGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTTGVS*SHTWFN
Trigger: ATTAAACCATGTATGGGATCAGGAAACGCCAGTTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCGGTTAATGGCTTGTTaGATGTCATCCAAACTAGGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRLMAC*MSSKLG
Trigger: TCCTAGTTTGGATGACATTCAACAAGCCATTAACCG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATCATCGAAACTGGCCTaGAATATCTGTAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSSKLA*NICSLL
Trigger: CAACAGGCTACAGATATTTCAGGCCAGTTTCGATGA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTTCTGCAGCAAGTTaGGTTCTTTTCTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHASAAS*VLFWFC
Trigger: ACAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATTGTATCTGTTGCTaGGTAAAGACCCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHCICC*VKTLRP
Trigger: TGGTCTTAGGGTCTTTACTCAGCAACAGATACAATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAAATACCCTGTGAGTaGCTTCTGACATACTTCCAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQIPCE*LLTYFQ
Trigger: TTGGAAGTATGTCAGAAGTCACTCACAGGGTATTTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTCCAAATACCCTGTaGGTGACTTCTGACATACTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSPNTL*VTSDIL
Trigger: AAGTATGTCAGAAGTCACTCACAGGGTATTTGGAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAATGTCACCTCATTaGTGTTGTCAGATACTGCAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEMSPH*CCQILQ
Trigger: CTGCAGTATCTGACAACATCAATGAGGTGACATTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGCCTGAGCTAACGTaGTATAGCATCTATCTGTTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRPELT*YSIYLL
Trigger: TAACAGATAGATGCTATATCACGTTAGCTCAGGCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAATCCATTTGATCTaGGCAATTGAACACGACCAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEIHLI*AIEHDH
Trigger: GTGGTCGTGTTCAATTGCTCAGATCAAATGGATTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATTCGCATTTCTCTATaGGGCCTTCCGCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISIRISL*GLPHSV
Trigger: AACAGAATGCGGAAGGCCTCATAGAGAAATGCGAAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAATCAGACCTTGGGTaGTTTCATCCATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKSDLG*FHPSHL
Trigger: GAGATGAGATGGATGAAATCACCCAAGGTCTGATTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGACAATATTATAGTCTaGAAGGAAGTAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDNIIV*KEVGGH
Trigger: GTGGCCTCCTACTTCCTTTCAGACTATAATATTGTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTTTCACAGCTCTCTaGAACCATGTCATGAAACAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTFTAL*NHVMKQ
Trigger: CTGTTTCATGACATGGTTTCAGAGAGCTGTGAAAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGACTGCAAGATCCTaGGAGAGTTTAGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLTARS*ESLATD
Trigger: ATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATTCAGGTTTTCTGTaGAAGGAATTTTCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDSGFL*KEFSVL
Trigger: GAGCACGGAAAATTCCTTTCACAGAAAACCTGAATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATCCAAGTTTTGCCTTaGGTTTGTGGGTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISIQVLP*VCGSMR
Trigger: CCTCATAGACCCACAAACTCAAGGCAAAACTTGGAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCGAAGTACACCAATaGGAGATTCGTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFEVHQ*EIRHLP
Trigger: TGGTAGATGACGAATCTCTCATTGGTGTACTTCGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTAACTGTCCCTCTCTaGAGGTCAATCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLTVPL*RSIFKV
Trigger: GACCTTAAAGATTGACCTTCAGAGAGGGACAGTTAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAACTCTTTTCCAGAGCTaGGGTATACGAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISTLFQS*GIRASY
Trigger: GTATGATGCTCGTATACCTCAGCTCTGGAAAAGAGT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCACTCTATCAAACTTaGTTAGATCATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLSLYQT*LDHVLS
Trigger: AGACAACACATGATCTAAGCAAGTTTGATAGAGTGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAACCTGATGGGCTACTaGGTTTTGCAGTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISNLMGY*VLQFCI
Trigger: TATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTTCCGCATTCTGTTTaGGCCTTCATTAGAATCGTG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLPHSV*AFIRIV
Trigger: CACGATTCTAATGAAGGCGCAAACAGAATGCGGAAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCACGAGTAAGATGTaGATTAAACCACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCTSKM*IKPLLI
Trigger: GATGAGCAGTGGTTTAATGCACATCTTACTCGTGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCCATCTCATCTCGTaGAAACAAGTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIHLIS*KQVGDL
Trigger: GAGATCTCCAACTTGTTTGCACGAGATGAGATGGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAAGGAATTTTCCGTaGTCTCAACTCCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHERNFP*SQLHFP
Trigger: TGGGAAATGGAGTTGAGAGCACGGAAAATTCCTTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTTTCTGCAGCCACATaGAACTTTTCACTTACCTCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVSAAT*NFSLTS
Trigger: TGAGGTAAGTGAAAAGTTGCATGTGGCTGCAGAAAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTGATCTCAGTTTCTaGAGCCACATGCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLDLSF*SHMQLF
Trigger: GAAAAGTTGCATGTGGCTGCAGAAACTGAGATCAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGTTTCTTGGCCAATaGATCAATTTGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFLGQ*INLIGG
Trigger: CCCACCAATCAAATTGATGCATTGGCCAAGAAACTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCGCTTCATGATCATCTaGAAGAACTATCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRFMII*KNYPFF
Trigger: GAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGACAGCCTTACAACTTaGCCCTTTAATCTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDSLTT*PFNLLN
Trigger: ATTGAGCAGATTAAAGGGCCAAGTTGTAAGGCTGTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACAACTTCCCTGTTTCTaGATGTCGCACAAAAAGCGT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISQLPCF*MSHKKR
Trigger: ACGCTTTTTGTGCGACATCCAGAAACAGGGAAGTTG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGGGGTGGTATATTTaGAACCATAGGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLGWYI*NHRSFQ
Trigger: TTGGAAGGACCTATGGTTCCAAATATACCACCCCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAGATCATCGAAACTaGCCTGAAATATCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTDHRN*PEISVA
Trigger: GGCTACAGATATTTCAGGCCAGTTTCGATGATCTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTTCATCAACCAGTTTaGAAAGGTTCATATCTCTTA +
Preference number: 4 (lower is better)
Translates to: RVIKELLGRKDTHITESLLHQPV*KGSYLL
Trigger: TAAGAGATATGAACCTTTCCAAACTGGTTGATGAAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCACCAGTTGGTTCTaGCATCTCACGAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHITSWF*HLTKKI
Trigger: GATTTTCTTCGTGAGATGCCAGAACCAACTGGTGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTCGTGCAAACAAGTTaGAGATCTCCCCTGAAGATA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLVQTS*RSPLKI
Trigger: TATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAACTTCTCACCAACTaGAGAAAAGCAGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHELLTN*RKAENN
Trigger: GTTGTTCTCTGCTTTTCTCCAGTTGGTGAGAAGTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGAGAGGTAAGATTTaGGAGTCACATGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMRGKI*ESHVLF
Trigger: GAAGAGCACATGTGACTCCCAAATCTTACCTCTCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATCTGGCCATGGACTaGTCAAATAACTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDLAMD*SNNFKN
Trigger: GTTCTTGAAGTTATTTGACCAGTCCATGGCCAGATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTGACTTTTCAGATCTaGCCATGGACTGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVTFQI*PWTGQI
Trigger: TATTTGACCAGTCCATGGCCAGATCTGAAAAGTCAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACATCAATTTGATTGGTaGGGTCAGATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISHQFDW*GQIPWT
Trigger: TGTCCATGGGATCTGACCCCACCAATCAAATTGATG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATGCATCAATTTGATTaGTGGGGTCAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISMHQFD*WGQIPW
Trigger: CCATGGGATCTGACCCCACCAATCAAATTGATGCAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTCAGATCCGCTTCATaGTCATCTGGAAGAACTATC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISFRSAS*SSGRTI
Trigger: GATAGTTCTTCCAGATGATCATGAAGCGGATCTGAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATTTGCTGTATCAGTaGTTCTTGCATCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHLLYQ*FLHPNH
Trigger: GTGATTTGGATGCAAGAATCACTGATACAGCAAATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGAAATAATATCTTCTaGCTGCTTTCGCCCATAAAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGNNIF*LLSPIK
Trigger: CTTTATGGGCGAAAGCAGTCAGAAGATATTATTTCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGTATCAACTGCTTCTaGTTCTTCTTTGGTTACTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGINCF*FFFGYF
Trigger: GAAGTAACCAAAGAAGAATCAGAAGCAGTTGATACC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACATTGTATCTGTTGCTaGGTAAAGACCCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISHCICC*VKTLRP
Trigger: TGGTCTTAGGGTCTTTACTCAGCAACAGATACAATG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACATTGGGATTCTCATaGGCTCGCTGCATTATTTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTLGFS*ARCIIF
Trigger: AAAAATAATGCAGCGAGCTCATGAGAATCCCAATGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACTGCTCATGTAAATaGGGTAAAAGTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNCSCK*GKSCPM
Trigger: CATGGGACAACTTTTACCTCATTTACATGAGCAGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAATCCTGAATCACTaGTTTGATAGAAAGCGGATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEILNH*FDRKRI
Trigger: GATCCGCTTTCTATCAAATCAGTGATTCAGGATTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATTGGTCACTTGCATaGTTTTCCTGTCATCTTTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDWSLA*FSCHLL
Trigger: CAAAAGATGACAGGAAAATCATGCAAGTGACCAATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACCCTTCCAGAAGATTaGGAGATTGCACAATATAGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTLPED*EIAQYS
Trigger: ACTATATTGTGCAATCTCTCAATCTTCTGGAAGGGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAAAGAGGCCAATCTTaGAAGACTTTGTTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKRGQS*KTLFSG
Trigger: TCCGGAAAACAAAGTCTTTCAAGATTGGCCTCTTTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGACAATATTATAGTCTaGAAGGAAGTAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISDNIIV*KEVGGH
Trigger: GTGGCCTCCTACTTCCTTTCAGACTATAATATTGTC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTTTTAATTTTGGCTaGAGCCTGAGCGCTTACTGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIFNFG*SLSAYC
Trigger: ACAGTAAGCGCTCAGGCTTCAGCCAAAATTAAAAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTTTTGCAAGTTTCCTaGCTGTGGCAATATCATTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVLQVS*LWQYHL
Trigger: CAAATGATATTGCCACAGTCAGGAAACTTGCAAAAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTAACTGTCCCTCTCTaGAGGTCAATCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLTVPL*RSIFKV
Trigger: GACCTTAAAGATTGACCTTCAGAGAGGGACAGTTAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCTTTAATGAGAGCTTaGAACTCTCTGTGCTTAACT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPLMRA*NSLCLT
Trigger: AGTTAAGCACAGAGAGTTTCAAGCTCTCATTAAAGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATATACTTTCTTGCTTaGAAAACAGTACGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIYFLA*KTVRSG
Trigger: CCCAGACCGTACTGTTTTTCAAGCAAGAAAGTATAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGAGGAAACTAGACTaGGGTTTAAAATTCACAGGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRRKLD*GLKFTG
Trigger: ACCTGTGAATTTTAAACCTCAGTCTAGTTTCCTCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAATTTCATCATTTTTaGCCCTTTAGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFHHF*PFSCSS
Trigger: GCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTTCAGATTCTCCCTaGTTGGACTGGTTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFSDSP*LDWFKA
Trigger: TGCTTTAAACCAGTCCAAGCAGGGAGAATCTGAAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTTCTTTTCTCATCTaGTCACTCTCAATAAGTACC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHASFLI*SLSIST
Trigger: GGTACTTATTGAGAGTGAGCAGATGAGAAAAGAAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTATTGCAGAAGACCCTaGAAATACAGTTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYCRRP*KYSLSA
Trigger: AGCAGACAAACTGTATTTGCAGGGTCTTCTGCAATA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTCTGAAAACGTTTTaGTTCCTGAGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHILKTF*FLRQLF
Trigger: AAACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGCACTCCAAGAGCTaGATTTTGGGATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLHSKS*ILGLRF
Trigger: AAATCTCAATCCCAAAATGCAGCTCTTGGAGTGCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTGCTGCTATGAGCTaGACATCAACAATAGTAGTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIAAMS*TSTIVV
Trigger: CACTACTATTGTTGATGTGCAGCTCATAGCAGCAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAGAATACACGACGCTaGATCAGAGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKNTRR*IRANIF
Trigger: GAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCTGCATCAAATTTTaGCTGTACTTTATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCCIKF*LYFIQL
Trigger: GAGCTGGATAAAGTACAGGCAAAATTTGATGCAGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGTTTCTGCAGCCACATaGAACTTTTCACTTACCTCA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISVSAAT*NFSLTS
Trigger: TGAGGTAAGTGAAAAGTTGCATGTGGCTGCAGAAAC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGTACTTCTTGTCCTTaGCCCATTGAGATAGTTCTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCTSCP*PIEIVL
Trigger: TAGAACTATCTCAATGGGGCAAGGACAAGAAGTACA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTATTCCATGTGCCATaGAAACTAGGTCATGGTTAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVFHVP*KLGHGY
Trigger: ATAACCATGACCTAGTTTCCATGGCACATGGAATAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATAGGCTTCTTCAATTaGTCCCAAAGTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIGFFN*SQSHVH
Trigger: ATGGACATGACTTTGGGACCAATTGAAGAAGCCTAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCGTTCTCGATATTGTaGACTTCAAACAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHAFSIL*TSNRSL
Trigger: TAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTCCTCAGCTTTTATaGTCAACATTCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTPQLL*STFLAK
Trigger: TTTGGCAAGGAATGTTGACCATAAAAGCTGAGGAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTACATTATCCAAGGCTaGATCCAGCTCTTCATGAAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYIIQG*IQLFMN
Trigger: ATTCATGAAGAGCTGGATCCAGCCTTGGATAATGTA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTAGCATTAATCTCTaGGGTAAAGGCAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFSINL*GKGRIW
Trigger: CCAAATCCTGCCTTTACCCCAGAGATTAATGCTAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAAACAGGAATTTGTaGTTTTCGTATAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTNRNL*FSYRPL
Trigger: CAGAGGCCTATACGAAAACCACAAATTCCTGTTTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACATTTGCTGTATCAGTaGTTCTTGCATCCAAATCAC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISHLLYQ*FLHPNH
Trigger: GTGATTTGGATGCAAGAATCACTGATACAGCAAATG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGTATTATAATACCTTaGCACACCGTGAATCATTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGIIIP*HTVNHS
Trigger: AGAATGATTCACGGTGTGTCAAGGTATTATAATACC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTAATTCGACTTCTTaGAAGAAGCTTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTNSTS*KKLSSV
Trigger: AACACTGGAAAGCTTCTTTCAAGAAGTCGAATTAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGTGTATGTCTCATTaGGGGTCAACATATCTTCTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLCMSH*GSTYLL
Trigger: TAGAAGATATGTTGACCCTCAATGAGACATACACAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCCATTGCAAATCTaGCATCATCTAAATCACGAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLPLQI*HHLNHE
Trigger: TTCGTGATTTAGATGATGTCAGATTTGCAATGGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAGGACATGACTCACTaGAATCATCAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEDMTH*NHQFSF
Trigger: AAAAGAGAATTGATGATTTCAGTGAGTCATGTCCTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGAATGGTAAGAGTTaGAATCCTGAATCACTGATT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRNGKS*NPESLI
Trigger: AATCAGTGATTCAGGATTTCAACTCTTACCATTCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTGATCTGAGCAATTaGACACGACCACATATTTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFDLSN*TRPHIF
Trigger: GAAAATATGTGGTCGTGTTCAATTGCTCAGATCAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTCTTAGTCCTCTCATaGCAATGCTTAATTCACTAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLVLS*QCLIHY
Trigger: ATAGTGAATTAAGCATTGTCATGAGAGGACTAAGAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCTGCATTTTGGGATTaGGATTTAGCTTCATATATG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHAAFWD*DLASYM
Trigger: CATATATGAAGCTAAATCTCAATCCCAAAATGCAGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATACATGGTTTGATTTaGGCCTTTAGGTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIHGLI*AFRYFW
Trigger: CCAGAAATACCTAAAGGCTCAAATCAAACCATGTAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTTCAATTGTTCTCTaGAACATCATTGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLSIVL*NIIGSV
Trigger: CACAGAACCAATGATGTTTCAGAGAACAATTGAAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCTCATTAGTTATCTaGTCTCCCCACTCATTAATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHISLVI*SPHSLI
Trigger: GATTAATGAGTGGGGAGATCAGATAACTAATGAGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACATATTTGAGGCTTaGAACTTCTACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHIFEA*NFYKDQ
Trigger: TTGATCCTTGTAGAAGTTTCAAGCCTCAAATATGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGATCCACCAACATTaGAATAAGATTCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRIHQH*NKIQVF
Trigger: GAAAACCTGAATCTTATTTCAATGTTGGTGGATCCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAATAATGCCATTCTaGATTGAGAGATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTIMPF*IERSSP
Trigger: AGGAGATGATCTCTCAATTCAGAATGGCATTATTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACTCTCCTTAGTAACTaGTTCTCAAGTCCTTTCATT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTLLSN*FSSPFI
Trigger: AATGAAAGGACTTGAGAATCAGTTACTAAGGAGAGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAATCTTTAAGGTCATaGGGAGTACAAACAGGAATT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQSLRS*GVQTGI
Trigger: AATTCCTGTTTGTACTCCTCATGACCTTAAAGATTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATATACTTTCTTGCTTaGAAAACAGTACGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISIYFLA*KTVRSG
Trigger: CCCAGACCGTACTGTTTTTCAAGCAAGAAAGTATAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAAACTGAACACTGGCTaGAAAGTCAGCAGAATTGAA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISKLNTG*KVSRIE
Trigger: TTCAATTCTGCTGACTTTTCAGCCAGTGTTCAGTTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACAATTTCATCATTTTTaGCCCTTTAGTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISQFHHF*PFSCSS
Trigger: GCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGTATCAGTGATTCTTaGATCCAAATCACGCCAATT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCISDS*IQITPI
Trigger: AATTGGCGTGATTTGGATGCAAGAATCACTGATACA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCAGAATGTCATATTaGTTTTTCTTAACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSRMSY*FFLTPW
Trigger: CCAAGGGGTTAAGAAAAAGCAATATGACATTCTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAGCTTCTTCCACATaGTTACTTTTGTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTASST*LLLWFR
Trigger: TCTAAACCACAAAAGTAAGCATGTGGAAGAAGCTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTCATTATCACGTATaGAAGACAAGGCTTCCATTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFHYHV*KTRLPL
Trigger: CAATGGAAGCCTTGTCTTGCATACGTGATAATGAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATCCATACAGCTTCTaGAGCAAGTTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNPYSF*SKLSSF
Trigger: AAAAGAACTCAACTTGCTGCAGAAGCTGTATGGATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCGATCATAGTCTTTTaGATGAAATGTCACCTCATT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHAIIVF*MKCHLI
Trigger: AATGAGGTGACATTTCATGCAAAAGACTATGATCGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCGTTTTGCAGTTCTaGATAAGTATTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCVLQF*ISITIQ
Trigger: CTGGATAGTAATACTTATGCAGAACTGCAAAACGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTGCACAATATAGTTaGACTCCAAGAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIAQYS*TPRAAF
Trigger: AAATGCAGCTCTTGGAGTGCAACTATATTGTGCAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATTGCTGCTATGAGCTaGACATCAACAATAGTAGTG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISIAAMS*TSTIVV
Trigger: CACTACTATTGTTGATGTGCAGCTCATAGCAGCAAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGGTCAACATTCCTTaGCAAATTCTGGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMVNIP*QILERS
Trigger: AGATCTTTCCAGAATTTGGCAAGGAATGTTGACCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTTATAAATCTGTCTaGAATTACTCTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSYKSV*NYSAAL
Trigger: GAGTGCAGCAGAGTAATTGCAGACAGATTTATAACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGTGCATTAAACCACTaGTCATCTTCAGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCALNH*SSSGVI
Trigger: TATAACTCCTGAAGATGAGCAGTGGTTTAATGCACA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATGCCATAAAATATTaGCATAGCAAGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDAIKY*HSKCPR
Trigger: TCTTGGACACTTGCTATGGCAATATTTTATGGCATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGAATTCTTTACTTTaGTGGGTCCACCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLNSLL*WVHRIF
Trigger: AAAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTCCTCCAAAGAATCTaGAATATACTTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLQRI*NILSCL
Trigger: CAAGCAAGAAAGTATATTGCAGATTCTTTGGAGGAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGTACATCTCCTTCTTaGTACAAAAATTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGTSPS*YKNFSV
Trigger: GACACTGAAATTTTTGTACCAAGAAGGAGATGTACC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAATCAACACAGTTTTaGCTATCTCCTTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKSTQF*LSPSEL
Trigger: CAGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTGTCTCTGTTTCATaGCCTTATTGGTCATCATTT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSVSVS*PYWSSF
Trigger: AAATGATGACCAATAAGGCCATGAAACAGAGACACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACTCAGATTTTGGTTaGTCCAATTCTCAATCACCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNSDFG*SNSQSP
Trigger: AGGTGATTGAGAATTGGACCAACCAAAATCTGAGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCAAAACTCAGATTTTaGTTGGTCCAATTCTCAATC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHAKLRF*LVQFSI
Trigger: GATTGAGAATTGGACCAACCAAAATCTGAGTTTTGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCAGTAATGGCTTTTaGATTCATTCGCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCSNGF*IHSHFS
Trigger: AGAGAAATGCGAATGAATCCAAAAGCCATTACTGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCGGAATACTGTCAGTTaGATAATAATAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRNTVS*IIIRLK
Trigger: CTTCAGCCTTATTATTATCCAACTGACAGTATTCCG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAATTTAGAAGGAGTTaGCAGCATCTTCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKFRRS*QHLHLS
Trigger: ACTAAGGTGAAGATGCTGCCAACTCCTTCTAAATTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATAATAAGATGTGGTaGTTTTGCAAGTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHNKMW*FCKFPD
Trigger: GTCAGGAAACTTGCAAAACCACCACATCTTATTATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATACATTATCCAAGGCTaGATCCAGCTCTTCATGAAT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISYIIQG*IQLFMN
Trigger: ATTCATGAAGAGCTGGATCCAGCCTTGGATAATGTA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATTTCTGCAAATTGTaGAAGTTTACTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNFCKL*KFTQLH
Trigger: GTGGAGCTGAGTAAACTTCCACAATTTGCAGAAATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGATAATTTCCTCCTCTaGAGCATCTTTATCAAACCA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDNFLL*SIFIKP
Trigger: TGGTTTGATAAAGATGCTCCAGAGGAGGAAATTATC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCAGTTTCAGTTTCTTaGCCAATGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPVSVS*PMHQFD
Trigger: ATCAAATTGATGCATTGGCCAAGAAACTGAAACTGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAACTAATTCGACTTCTTaGAAGAAGCTTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISTNSTS*KKLSSV
Trigger: AACACTGGAAAGCTTCTTTCAAGAAGTCGAATTAGT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTGTGTATGTCTCATTaGGGGTCAACATATCTTCTA +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLCMSH*GSTYLL
Trigger: TAGAAGATATGTTGACCCTCAATGAGACATACACAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAGGAATGGTAAGAGTTaGAATCCTGAATCACTGATT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISRNGKS*NPESLI
Trigger: AATCAGTGATTCAGGATTTCAACTCTTACCATTCCT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAATGTCCAGAAGGTCTTaGTTAATTCCAGCAAATGTT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISMSRRS*LIPANV
Trigger: AACATTTGCTGGAATTAATCAAGACCTTCTGGACAT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR TCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAAAAGTCAGCAGAATTaGATTCGTAGGGAATATTCC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISKSQQN*IRREYS
Trigger: GGAATATTCCCTACGAATTCAATTCTGCTGACTTTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGAACTGTATCAATATaGATTTCACACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRTVSI*ISHKSL
Trigger: CAGTGACTTGTGTGAAATGCATATTGATACAGTTCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAATCCATACAGCTTCTaGAGCAAGTTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISNPYSF*SKLSSF
Trigger: AAAAGAACTCAACTTGCTGCAGAAGCTGTATGGATT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR GCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCACTCTATCAAACTTaGTTAGATCATGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSLYQT*LDHVLS
Trigger: AGACAACACATGATCTAAGCAAGTTTGATAGAGTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR GCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATGCGTTTTGCAGTTCTaGATAAGTATTACTATCCAG +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISCVLQF*ISITIQ
Trigger: CTGGATAGTAATACTTATGCAGAACTGCAAAACGCA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAATTCTGTCCTTCTTaGATCCAGAATGTCATATTG +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKFCPS*IQNVIL
Trigger: CAATATGACATTCTGGATCCAAGAAGGACAGAATTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAACTCAGATTTTGGTTaGTCCAATTCTCAATCACCT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISNSDFG*SNSQSP
Trigger: AGGTGATTGAGAATTGGACCAACCAAAATCTGAGTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATTTCCAGGAGAACTaGATCAGATACAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNFQEN*IRYKEE
Trigger: TTCTTCTTTGTATCTGATCCAGTTCTCCTGGAAATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCATCAACCAGTTTaGAAAGGTTCATATCTCTTA +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLHQPV*KGSYLL
Trigger: TAAGAGATATGAACCTTTCCAAACTGGTTGATGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAAATTTAGAAGGAGTTaGCAGCATCTTCACCTTAGT +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISKFRRS*QHLHLS
Trigger: ACTAAGGTGAAGATGCTGCCAACTCCTTCTAAATTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACATAATAAGATGTGGTaGTTTTGCAAGTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: YLREKFTTTRLFLGCHISHNKMW*FCKFPD
Trigger: GTCAGGAAACTTGCAAAACCACCACATCTTATTATG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CCA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTCATAATAAGATGTaGTGGTTTTGCAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSHNKM*WFCKFP
Trigger: AGGAAACTTGCAAAACCACCACATCTTATTATGAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGGACGGATTTGCTGTaGCCCCCAGTGAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGTDLL*PPVSHS
Trigger: GGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp GGAGGACCTCCGGGAAGACGGCAAGGACAGCACTTCCGAAATCACTaGCTGAACCGGTCGCGGTGCAAGCCTCTGTCGAACTCTATTCAG +
Preference number: 5 (lower is better)
Translates to: GGPPGRRQGQHFRNH*LNRSRCKPLSNSIQ
Trigger: CTGAATAGAGTTCGACAGAGGCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTGCTGTCCTTGCCGTCTTCCCGGAGGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCCAGTGCCCAGCCTTaGTGGGCACGGGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSSAQP*WARVTS
Trigger: AGAAGTGACCCGTGCCCACAAAGGCTGGGCACTGGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGGACACACATACAGCTaGGGGTCCTTGGGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSGHTYS*GSLGAV
Trigger: CACGGCACCCAAGGACCCCAAGCTGTATGTGTGTCC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp GACCTCCGGGAAGACGGCAAGGACAGCACTTCCGAAATCACTGACTaGACCGGTCGCGGTGCAAGCCTCTGTCGAACTCTATTCAGATCC +
Preference number: 5 (lower is better)
Translates to: DLREDGKDSTSEITD*TGRGASLCRTLFRS
Trigger: GGATCTGAATAGAGTTCGACAGAGGCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTGCTGTCCTTGCCGTCTTCCCGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGGACGGATTTGCTGTaGCCCCCAGTGAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGTDLL*PPVSHS
Trigger: GGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTGATGGGACGGATTaGCTGTTGCCCCCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLDGTD*LLPPVS
Trigger: GCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTTGATGGGACGGATTaGCTGTTGCCCCCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLDGTD*LLPPVS
Trigger: GCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp CTGGGAATGACAGACTTGATGGGACGGATTTGCTGTTGCCCCCAGTaGGCCACTCCTCTGCTGACCTCCAGGGTTAACTGGATCATACGG +
Preference number: 5 (lower is better)
Translates to: LGMTDLMGRICCCPQ*ATPLLTSRVNWIIR
Trigger: CCGTATGATCCAGTTAACCCTGGAGGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp CTCAGAAGGGGCGCCATCTTCAGCATCCTTCTCCATCCCCCGTCGTaGGGAATGCTTTATACTTCGAAACCTGTGTGCTGGGTACAGCCA +
Preference number: 5 (lower is better)
Translates to: LRRGAIFSILLHPPS*GMLYTSKPVCWVQP
Trigger: TGGCTGTACCCAGCACACAGGTTTCGAAGTATAAAGCATTCCGCACGACGGGGGATGGAGAAGGATGCTGAAGATGGCGCCCCTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAACCTGCGCGTACACCTaGGGGTGGCTCATTAGTGAA +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRTCAYT*GWLISE
Trigger: TTCACTAATGAGCCACCCCAAGGTGTACGCGCAGGT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGGCACGGGTCACTTCTaGCCTCATTGCTGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSGTGHF*PHCCEE
Trigger: TTCCTCACAGCAATGAGGCAAGAAGTGACCCGTGCC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGCGTGAAGAGTACCTaGGGGGTGGATTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCVKST*GVDSMS
Trigger: GCTCATGGAATCCACCCCCAAGGTACTCTTCACGCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGACACACATACAGCTaGGGGTCCTTGGGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGHTYS*GSLGAV
Trigger: CACGGCACCCAAGGACCCCAAGCTGTATGTGTGTCC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 90 bp CTTGGGGGTGGATTCCATGAGCTTCCCATTCCGTCTGTCCCAGGCTaGTCCATCCATGTAGAGCCCATAAATATACACACCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGGGFHELPIPSVPG*SIHVEPINIHTFPR
Trigger: CCTGGGGAAGGTGTGTATATTTATGGGCTCTACATGGATGGAGCAGCCTGGGACAGACGGAATGGGAAGCTCATGGAATCCACCCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAACTTAGAAATATCCTaGTGCTCCGCTACCCCCGGG +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNLEIS*CSATPG
Trigger: CCCGGGGGTAGCGGAGCACAAGGATATTTCTAAGTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAACATCTTCCATGCCTaGGCCTCGATGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRNIFHA*ASMDKA
Trigger: GGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAACATCTTCCATGCCTaGGCCTCGATGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNIFHA*ASMDKA
Trigger: GGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCCGATTCGGTTCCTTaGAGCAGGAGCTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPDSVP*SRSSPF
Trigger: AAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCCGATTCGGTTCCTTaGAGCAGGAGCTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPDSVP*SRSSPF
Trigger: AAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCATCTGTCCAGTCATaGGTAGCAGTGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPSVQS*VAVSSL
Trigger: CAGACTGGACACTGCTACCAATGACTGGACAGATGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCATCTGTCCAGTCATaGGTAGCAGTGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPSVQS*VAVSSL
Trigger: CAGACTGGACACTGCTACCAATGACTGGACAGATGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCTTCACCTTAGTCCATaGCCACAGCACTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSLHLSP*PQHSTH
Trigger: GTGGGTAGAGTGCTGTGGCAATGGACTAAGGTGAAG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTTTATCCAGCTCAGCTaGCTTCTCATCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSFIQLS*LLIQQG
Trigger: GCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAAA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTTATCCAGCTCAGCTaGCTTCTCATCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRFIQLS*LLIQQG
Trigger: GCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 90 bp CTTGGTCTGTCTCAGAACTTCATTGTGGATGGTCACAGTGTCCAGTaGCCAGCCTTTGTGGGCACGGGTCACTTCTTGCCTCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: LGLSQNFIVDGHSVQ*PAFVGTGHFLPHCC
Trigger: ACAGCAATGAGGCAAGAAGTGACCCGTGCCCACAAAGGCTGGGCACTGGACACTGTGACCATCCACAATGAAGTTCTGAGACAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 90 bp TTGGGTGCCGTGGAGTTAATGGCAAAGATGTGGAGCACGGGTAACTaGGTGAAGAGTACCTTGGGGGTGGATTCCATGAGCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: LGAVELMAKMWSTGN*VKSTLGVDSMSFPF
Trigger: GAATGGGAAGCTCATGGAATCCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCACATCTTTGCCATTAACTCCACGGCACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCAGATTCTCCCTGCTaGGACTGGTTTAAAGCACCC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSDSPC*DWFKAP
Trigger: GGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCTGGGAACAGGTCATaGATTAAGCTGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPGNRS*IKLRNR
Trigger: CCTGTTCCTCAGCTTAATCAATGACCTGTTCCCAGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACACCGCCTTCTTCTTaGGAGGGAATTAACCCTTCC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTPPSS*EGINPS
Trigger: GGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGTGAAGTCTCCAGGCTaGTCCAAGCTGTACATTCCT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRVKSPG*SKLYIP
Trigger: AGGAATGTACAGCTTGGACAAGCCTGGAGACTTCAC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTGAAGTCTCCAGGCTaGTCCAAGCTGTACATTCCT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVKSPG*SKLYIP
Trigger: AGGAATGTACAGCTTGGACAAGCCTGGAGACTTCAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCTGCTGCACTCGTGTTaGAAAAGGGACAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWLLHSC*KRDRRV
Trigger: TACTCTCCTGTCCCTTTTCAAACACGAGTGCAGCAG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTGCTGCACTCGTGTTaGAAAAGGGACAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLLHSC*KRDRRV
Trigger: TACTCTCCTGTCCCTTTTCAAACACGAGTGCAGCAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCAGCTGCTGTCTGCTaGGTAGTTCGAAGTACACCA +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSAAVC*VVRSTP
Trigger: TGGTGTACTTCGAACTACCAAGCAGACAGCAGCTGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGGCCAATGCATCAATTaGATTGGTGGGGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRGQCIN*IGGVRS
Trigger: GGATCTGACCCCACCAATCAAATTGATGCATTGGCC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGACGTGATCTCCTCCTaGGTCTGTCTCAGAACTTCA +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDVISS*VCLRTS
Trigger: TGAAGTTCTGAGACAGACCAAGGAGGAGATCACGTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTACAGCTTGGGGTCCTaGGGTGCCGTGGAGTTAATG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMYSLGS*GAVELM
Trigger: CATTAACTCCACGGCACCCAAGGACCCCAAGCTGTA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAACTTAGAAATATCCTaGTGCTCCGCTACCCCCGGG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMNLEIS*CSATPG
Trigger: CCCGGGGGTAGCGGAGCACAAGGATATTTCTAAGTT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAATATCTGTAGCCTGTaGCTAGCTTCTTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNICSL*LASWGG
Trigger: ACCACCCCAAGAAGCTAGCAACAGGCTACAGATATT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAATATCTGTAGCCTGTaGCTAGCTTCTTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNICSL*LASWGG
Trigger: ACCACCCCAAGAAGCTAGCAACAGGCTACAGATATT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGTCACCTCATTGATGTaGTCAGATACTGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWVTSLM*SDTAGR
Trigger: TCTCCCTGCAGTATCTGACAACATCAATGAGGTGAC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGACTGTGCAAGACCTTaGAAAATCCTTCCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDCARP*KILPRP
Trigger: AGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGAGGCGTTCTCGATATaGTGGACTTCAAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWEAFSI*WTSNRS
Trigger: GCTTCTGTTTGAAGTCCACAATATCGAGAACGCCTC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCTGGTAAGTCCAACTaGCTTTCATGCTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSGKSN*LSCCRK
Trigger: CTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTGGTAAGTCCAACTaGCTTTCATGCTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSGKSN*LSCCRK
Trigger: CTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTCGTGCAAACAAGTaGGAGATCTCCCCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSRANK*EISPED
Trigger: ATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAGTTTTGCCTTGAGTTaGTGGGTCTATGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSFALS*WVYEEW
Trigger: CCACTCCTCATAGACCCACAAACTCAAGGCAAAACT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAACCACCCTGCTGCATaGACATCTGAATCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNHPAA*TSESAF
Trigger: GAAAGCTGATTCAGATGTCAATGCAGCAGGGTGGTT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGTCTCAGAACTTCATaGTGGATGGTCACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCLRTS*WMVTVS
Trigger: GGACACTGTGACCATCCACAATGAAGTTCTGAGACA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGTCTCAGAACTTCATaGTGGATGGTCACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRCLRTS*WMVTVS
Trigger: GGACACTGTGACCATCCACAATGAAGTTCTGAGACA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp GCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATaGACTTACTTGATGTCACACAAAAGGGCCACTCCTCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: AQAVYVGSGALSRWK*TYLMSHKRATPLRI
Trigger: GATCCTGAGAGGAGTGGCCCTTTTGTGTGACATCAAGTAAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAATGTTTCCTGTAGATaGGGAAGGCCACTCATACTC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSNVSCR*GRPLIL
Trigger: GAGTATGAGTGGCCTTCCCAATCTACAGGAAACATT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAATGTTTCCTGTAGATaGGGAAGGCCACTCATACTC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNVSCR*GRPLIL
Trigger: GAGTATGAGTGGCCTTCCCAATCTACAGGAAACATT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACCTGTTCGATCTGTTaGTACCATACCATCAGCACT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTCSIC*YHTIST
Trigger: AGTGCTGATGGTATGGTACAAACAGATCGAACAGGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCAGTCAGAGAGGGGTaGTTAGCCAAAAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSVREG*LAKNSF
Trigger: GAAGGAATTTTTGGCTAACAACCCCTCTCTGACTGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATAGGCTTCTTCAATaGGTCCCAAAGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHRLLQ*VPKSCP
Trigger: TGGACATGACTTTGGGACCAATTGAAGAAGCCTATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCATCTCCACAGGACCTTaGGCCATAACAGAATTATCC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSISTGP*AITELS
Trigger: GGATAATTCTGTTATGGCCAAAGGTCCTGTGGAGAT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCTGGCTCTTTTTaGAGATCCAAGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRWSGSF*RSKSPQ
Trigger: TTGAGGACTCTTGGATCTCAAAAAAGAGCCAGACCA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCAGCTGCTGTCTGCTaGGTAGTTCGAAGTACACCA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSAAVC*VVRSTP
Trigger: TGGTGTACTTCGAACTACCAAGCAGACAGCAGCTGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTTAAAGCACCCCAGTaGTTTGTTGCAAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFKAPQ*FVARTA
Trigger: AGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCCACATGCTTACTTTaGTGGTTTAGAATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSTCLL*WFRMSA
Trigger: GGCTGACATTCTAAACCACAAAAGTAAGCATGTGGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCCACATGCTTACTTTaGTGGTTTAGAATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSTCLL*WFRMSA
Trigger: GGCTGACATTCTAAACCACAAAAGTAAGCATGTGGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCCAAGAGCTGCATTTaGGGATTGAGATTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSKSCI*GLRFSF
Trigger: GAAGCTAAATCTCAATCCCAAAATGCAGCTCTTGGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCTCGTGCAAACAAGTaGGAGATCTCCCCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSRANK*EISPED
Trigger: ATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTTCGGCGGTATCTTaGGAAATAACTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSSAVS*EITFTA
Trigger: AGCTGTGAAAGTTATTTCCAAAGATACCGCCGAAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTAGCTGCCTCAAGCTaGCTTTCAGCTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLAASS*LSAFTF
Trigger: AAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGCAATATCATTTGGCTaGATAGTATTCAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSAISFG*IVFRAA
Trigger: AGCAGCCCTGAATACTATCAAGCCAAATGATATTGC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTCCACAGGAATCCTGTaGCACTCATCAACTTTAATG +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSTGIL*HSSTLM
Trigger: CATTAAAGTTGATGAGTGCAACAGGATTCCTGTGGA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGTTTTGCCTTGAGTTaGTGGGTCTATGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSFALS*WVYEEW
Trigger: CCACTCCTCATAGACCCACAAACTCAAGGCAAAACT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCGAGCATCATACATGTaGTCCAGAGCATCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMRASYM*SRASLR
Trigger: TCTGAGAGATGCTCTGGACAACATGTATGATGCTCG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGCTGTGAGGAAGCCTaGGGGATTAAAGAAACCAGT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCCEEA*GIKETS
Trigger: ACTGGTTTCTTTAATCCCCAAGGCTTCCTCACAGCA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp GGTCGCGGTGCAAGCCTCTGTCGAACTCTATTCAGATCCGCTTCATaGTCATCTGGAAGAACTATCCCTTCTTCAGAAGGAATGAGATCC +
Preference number: 5 (lower is better)
Translates to: GRGASLCRTLFRSAS*SSGRTIPSSEGMRS
Trigger: GGATCTCATTCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCGGATCTGAATAGAGTTCGACAGAGGCTTGCACCGCGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 90 bp GATGGCGAGGTAGCTCCCTCTTCATCACTGAAATCAGACCTTGGGTaGTTTCATCCATCTCATCTCGTGCAAACAAGTTGGAGATCTCCC +
Preference number: 5 (lower is better)
Translates to: DGEVAPSSSLKSDLG*FHPSHLVQTSWRSP
Trigger: GGGAGATCTCCAACTTGTTTGCACGAGATGAGATGGATGAAATCACCCAAGGTCTGATTTCAGTGATGAAGAGGGAGCTACCTCGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp ATAGCCTCCCGGGTCTCTCCCACACCACCTCCACTCTCTTTGGGTTaGATGTTGGTAATTGTTTCAAGAACAGCAGAAGCAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: IASRVSPTPPPLSLG*MLVIVSRTAEAVLL
Trigger: GAGTAACACTGCTTCTGCTGTTCTTGAAACAATTACCAACATTCAACCCAAAGAGAGTGGAGGTGGTGTGGGAGAGACCCGGGAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp CAGAAGCCCAGTGTGGACGAATCCCAAGACACTCTTTTCCAGAGCTaGGGTATACGAGCATCATACATGTTGTCCAGAGCATCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: QKPSVDESQDTLFQS*GIRASYMLSRASLR
Trigger: TCTGAGAGATGCTCTGGACAACATGTATGATGCTCGTATACCTCAGCTCTGGAAAAGAGTGTCTTGGGATTCGTCCACACTGGGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp TGCAGCAGGAGCAGTCTCTTGTCACATACCTGCTGCATTGACATCTaGATCAGCTTTCGAGCATGTACTTCTTGTCCTTGCCCCATTGAG +
Preference number: 5 (lower is better)
Translates to: CSRSSLLSHTCCIDI*ISFRACTSCPCPIE
Trigger: CTCAATGGGGCAAGGACAAGAAGTACATGCTCGAAAGCTGATTCAGATGTCAATGCAGCAGGTATGTGACAAGAGACTGCTCCTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS CCA 90 bp GGAGGATGGCGAGGTAGCTCCCTCTTCATCACTGAAATCAGACCTTaGGTGATTTCATCCATCTCATCTCGTGCAAACAAGTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: GGWRGSSLFITEIRP*VISSISSRANKLEI
Trigger: GATCTCCAACTTGTTTGCACGAGATGAGATGGATGAAATCACCCAAGGTCTGATTTCAGTGATGAAGAGGGAGCTACCTCGCCATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAATTCTTTAGCAGTTaGGAGTGTGCAACATTTAGC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQFFSS*ECATFS
Trigger: GCTAAATGTTGCACACTCCAAACTGCTAAAGAATTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACTTTACCGTCCGGACTaGATAAAATGTCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRLYRPD*IKCLSF
Trigger: AAAACTCAGACATTTTATCAAGTCCGGACGGTAAAG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGGAAATCAACACAGTTTaGGCTATCTCCTTCAGAACT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWEINTV*AISFRT
Trigger: AGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTTC...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCATACGGTTAATGGCTaGTTGAATGTCATCCAAACT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSHTVNG*LNVIQT
Trigger: AGTTTGGATGACATTCAACAAGCCATTAACCGTATG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAGTTTTCCTGTGTTTaGATGGGTCACGTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQFSCV*MGHVSS
Trigger: ACTACTGACGTGACCCATCAAAACACAGGAAAACTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCACAGACTCAAGTAGATaGCTTTTAAACTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSTDSSR*LLNFGC
Trigger: GCAGCCAAAGTTTAAAAGCAATCTACTTGAGTCTGT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAACTCAGATTTTGGTaGGTCCAATTCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWKLRFW*VQFSIT
Trigger: GGTGATTGAGAATTGGACCAACCAAAATCTGAGTTT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCGGAATACTGTCAGTaGGATAATAATAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPEYCQ*DNNKAE
Trigger: TTCAGCCTTATTATTATCCAACTGACAGTATTCCGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCACGTAGCTTTCAATaGTTCTCTGAAACATCATTG +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPRSFQ*FSETSL
Trigger: CAATGATGTTTCAGAGAACAATTGAAAGCTACGTGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCCCACGTAGCTTTCAATaGTTCTCTGAAACATCATTG +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSPRSFQ*FSETSL
Trigger: CAATGATGTTTCAGAGAACAATTGAAAGCTACGTGG...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATGAAACAGGCCCATaGTTTCTACAACTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHETGP*FLQLVF
Trigger: AAAGACAAGTTGTAGAAACAATGGGCCTGTTTCATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTTTGAATTCTTTACTTaGCTGGGTCCACCGGATTTT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWFEFFT*LGPPDF
Trigger: AAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAAA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCACCGACTTTCACCTaGAAAGTGGTGCCAGATTTA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSPTFT*KVVPDL
Trigger: TAAATCTGGCACCACTTTCAAGGTGAAAGTCGGTGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGTACAAACAGGAATTaGTGGTTTTCGTATAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSSTNRN*WFSYRP
Trigger: AGGCCTATACGAAAACCACAAATTCCTGTTTGTACT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGATGTCCAGAAGGTCTaGATTAATTCCAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSDVQKV*INSSKC
Trigger: ACATTTGCTGGAATTAATCAAGACCTTCTGGACATC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTCCACTCTCTTTGGGTaGAATGTTGGTAATTGTTTC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWSTLFG*NVGNCF
Trigger: GAAACAATTACCAACATTCAACCCAAAGAGAGTGGA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp ATGAGGAGTGGGTATCTGGTGGCCTTTGTCACAATAATGCCATTCTaGATTGAGAGATCATCTCCTGGTAATCCCTGTAGCCCCCACTCA +
Preference number: 5 (lower is better)
Translates to: MRSGYLVAFVTIMPF*IERSSPGNPCSPHS
Trigger: TGAGTGGGGGCTACAGGGATTACCAGGAGATGATCTCTCAATTCAGAATGGCATTATTGTGACAAAGGCCACCAGATACCCACTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp ATATCATTTCGACCACCTCCAGGGTGGATCATTGCTGCTATGAGCTaGACATCAACAATAGTAGTGAAGTCTCCAGGCTTGTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: ISFRPPPGWIIAAMS*TSTIVVKSPGLSKL
Trigger: CAGCTTGGACAAGCCTGGAGACTTCACTACTATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCGAAATGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp CACATCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTaGTGCCCTGAGCAGATGGAAATGAACTTACTTGATGTCACACAA +
Preference number: 5 (lower is better)
Translates to: HITESLNSTGCLCGF*CPEQMEMNLLDVTQ
Trigger: TTGTGTGACATCAAGTAAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGGTACATCTCCTTCTaGGTACAAAAATTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSRYISF*VQKFQC
Trigger: ACACTGAAATTTTTGTACCAAGAAGGAGATGTACCT...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATGGTTATAGAGAGGTaGACACACTTTTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRMVIER*THFFQS
Trigger: ACTTTGGAAAAAGTGTGTCAACCTCTCTATAACCAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAAGGTATTATAATACCTaGACACACCGTGAATCATTC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRRYYNT*THRESF
Trigger: GAATGATTCACGGTGTGTCAAGGTATTATAATACCT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAATCCAGAATGTCATATaGCTTTTTCTTAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRIQNVI*LFLNPL
Trigger: CAAGGGGTTAAGAAAAAGCAATATGACATTCTGGAT...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAAATTCTGTCCTTCTaGGATCCAGAATGTCATATT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQILSF*DPECHI
Trigger: AATATGACATTCTGGATCCAAGAAGGACAGAATTTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGACAACTTCCAAAATTTaGGGATCGAAATTAACCAGC +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWTTSKI*GSKLTS
Trigger: GCTGGTTAATTTCGATCCCAAAATTTTGGAAGTTGT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTTGTGTATGTCTCATaGAGGGTCAACATATCTTCT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRFVYVS*RVNISS
Trigger: AGAAGATATGTTGACCCTCAATGAGACATACACAAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATTCGCCCATAAAGGCTaGCAACAAATATTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRFAHKG*QQIFFF
Trigger: AAAGAAGAATATTTGTTGCAAGCCTTTATGGGCGAA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACGGTTAATGGCTTGTaGAATGTCATCCAAACTAGG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTVNGL*NVIQTR
Trigger: CCTAGTTTGGATGACATTCAACAAGCCATTAACCGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGGACGGATTTGCTGTaGCCCCCAGTGAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGTDLL*PPVSHS
Trigger: GGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGTACTGAAACAGCTTaGCTCTGCAATTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCTETA*LCNLLK
Trigger: TTTCAACAAATTGCAGAGCAAAGCTGTTTCAGTACA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGTGCAAAACTCAGATTTaGGTTGGTCCAATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWCKTQI*VGPILN
Trigger: ATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCA...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCTGCAAAACTCAGATTTaGGTTGGTCCAATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSCKTQI*VGPILN
Trigger: ATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCA...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTATTCTGAAAACGTTTaGCTTCCTGAGGCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMYSENV*LPEAAV
Trigger: AACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAATA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATCTTCATCAACCAGTTaGGAAAGGTTCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRSSSTS*ERFISL
Trigger: AAGAGATATGAACCTTTCCAAACTGGTTGATGAAGA...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATGGGCTACTGCGTTTaGCAGTTCTGCATAAGTATT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMMGYCV*QFCISI
Trigger: AATACTTATGCAGAACTGCAAAACGCAGTAGCCCAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGAGAAAAGTTTAGACTTTaGGATAGCTGTACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSREKFRL*DSCTSG
Trigger: TCCTGAAGTACAGCTATCCAAAAGTCTAAACTTTTC...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCGAAAAGTTTAGACTTTaGGATAGCTGTACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SLSPSIAQAVYVGSGALSEKFRL*DSCTSG
Trigger: TCCTGAAGTACAGCTATCCAAAAGTCTAAACTTTTC...GCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCTTCGGCGGTATCTTaGGAAATAACTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSSAVS*EITFTA
Trigger: AGCTGTGAAAGTTATTTCCAAAGATACCGCCGAAGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTCCACAGGAATCCTGTaGCACTCATCAACTTTAATG +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSTGIL*HSSTLM
Trigger: CATTAAAGTTGATGAGTGCAACAGGATTCCTGTGGA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGCCATTTTCTCATTCATaGCTGCATCAAATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWPFSHS*LHQILP
Trigger: AGGCAAAATTTGATGCAGCAATGAATGAGAAAATGG...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACCATTTTCTCATTCATaGCTGCATCAAATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRPFSHS*LHQILP
Trigger: AGGCAAAATTTGATGCAGCAATGAATGAGAAAATGG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACATAATTTCTGCAAATaGTGGAAGTTTACTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRHNFCK*WKFTQL
Trigger: GAGCTGAGTAAACTTCCACAATTTGCAGAAATTATG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAATATACTTTCTTGCTaGAAAAACAGTACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SPSIAQAVYVGSGALSRWNILSC*KNSTVW
Trigger: CCAGACCGTACTGTTTTTCAAGCAAGAAAGTATATT...CCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACCTGCGCGTACACCTaGGGGTGGCTCATTAGTGAA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLTCAYT*GWLISE
Trigger: TTCACTAATGAGCCACCCCAAGGTGTACGCGCAGGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGACAATTAAGTAGACGTTaGTCAAAGTCATCTGTCACT +
Preference number: 5 (lower is better)
Translates to: LSPSIAQAVYVGSGALSRQLSRR*SKSSVT
Trigger: AGTGACAGATGACTTTGACAAACGTCTACTTAATTG...TCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGCGTGAAGAGTACCTaGGGGGTGGATTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLCVKST*GVDSMS
Trigger: GCTCATGGAATCCACCCCCAAGGTACTCTTCACGCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp CCGCTTCATGATCATCTGGAAGAACTATCCCTTCTTCAGAAGGAATaGGATCCCGATAATCCACCACAGAAGAAACAGCATCTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: PLHDHLEELSLLQKE*DPDNPPQKKQHLLR
Trigger: CCGCAGAAGATGCTGTTTCTTCTGTGGTGGATTATCGGGATCTCATTCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 90 bp CAAAAAGCGTGGCTTGTAAAGCGTAATGCAACTGTGAAATCTCTCTaGTCCAGGCTGTGTGATAGACCACCTCGAATTCCACCAGCACAT +
Preference number: 5 (lower is better)
Translates to: QKAWLVKRNATVKSL*SRLCDRPPRIPPAH
Trigger: ATGTGCTGGTGGAATTCGAGGTGGTCTATCACACAGCCTGGATCAGAGAGATTTCACAGTTGCATTACGCTTTACAAGCCACGCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp TACTCTGCTGCACTCGTGTTTGAAAAGGGACAGGAGAGTAGGGATTaGAGCGCACTCCTCAGCTTTTATGGTCAACATTCCTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: YSAALVFEKGQESRD*SALLSFYGQHSLPN
Trigger: ATTTGGCAAGGAATGTTGACCATAAAAGCTGAGGAGTGCGCTTCAATCCCTACTCTCCTGTCCCTTTTCAAACACGAGTGCAGCAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp ACTTACTTGATGTCACACAAAAGGGCCACTCCTCTCAGGATCCAGTaGTCCGGGGACAACACTGTTCGTAAATATACCACAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TYLMSHKRATPLRIQ*SGDNTVRKYTTVMK
Trigger: CTTCATCACTGTGGTATATTTACGAACAGTGTTGTCCCCGGATCACTGGATCCTGAGAGGAGTGGCCCTTTTGTGTGACATCAAGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp ATAATGTTGCAGCAGGAGCAGTCTCTTGTCACATACCTGCTGCATTaGCATCTGAATCAGCTTTCGAGCATGTACTTCTTGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: IMLQQEQSLVTYLLH*HLNQLSSMYFLSLP
Trigger: GGGCAAGGACAAGAAGTACATGCTCGAAAGCTGATTCAGATGTCAATGCAGCAGGTATGTGACAAGAGACTGCTCCTGCTGCAACATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS GCA 90 bp ACCATACCATCAGCACTTCCTCCAGCTGATGAACAGTTTCTGAGTTaGTGGCTGCAGCAGTTACTTCTTCAAAGGTGTGCAGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: TIPSALPPADEQFLS*WLQQLLLQRCAVWK
Trigger: TTTCCAAACTGCACACCTTTGAAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAGCTGGAGGAAGTGCTGATGGTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp ACGTTGTGGAATATCATTTCGACCACCTCCAGGGTGGATCATTGCTaGTATGAGCTGCACATCAACAATAGTAGTGAAGTCTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: TLWNIISTTSRVDHC*YELHINNSSEVSRL
Trigger: AAGCCTGGAGACTTCACTACTATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCGAAATGATATTCCACAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp TTCGTCTGCTTTTATGGAAGCCACTGCCAACTCCTTCTCCTTGACTaGAAGATCCTGAGAGAGTTTAGCAACAGATTCACTTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: FVCFYGSHCQLLLLD*KILREFSNRFTCLH
Trigger: ATGGAGGCAAGTGAATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGGCAGTGGCTTCCATAAAAGCAGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp ATCACTGAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTaGCCTGAGCAGATGGAAATGAACTTACTTGATGTCACACAAAAG +
Preference number: 5 (lower is better)
Translates to: ITESLNSTGCLCGFW*PEQMEMNLLDVTQK
Trigger: CTTTTGTGTGACATCAAGTAAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAATTCTTTAGCAGTTaGGAGTGTGCAACATTTAGC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQFFSS*ECATFS
Trigger: GCTAAATGTTGCACACTCCAAACTGCTAAAGAATTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCTTTACCGTCCGGACTaGATAAAATGTCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLYRPD*IKCLSF
Trigger: AAAACTCAGACATTTTATCAAGTCCGGACGGTAAAG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGATTTTAGCAATCTCTTaGCCTGTTCTGGTACATCCA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMILAIS*PVLVHP
Trigger: TGGATGTACCAGAACAGGCAAAGAGATTGCTAAAAT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACAGACTCAAGTAGATaGCTTTTAAACTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTDSSR*LLNFGC
Trigger: GCAGCCAAAGTTTAAAAGCAATCTACTTGAGTCTGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTCTGATTGGTCACTaGCATGATTTTCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFLIGH*HDFPVI
Trigger: GATGACAGGAAAATCATGCAAGTGACCAATCAGAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCCGGAATACTGTCAGTaGGATAATAATAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMPEYCQ*DNNKAE
Trigger: TTCAGCCTTATTATTATCCAACTGACAGTATTCCGG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTATGGTCAACATTCCTaGCCAAATTCTGGAAAGATC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMYGQHS*PNSGKI
Trigger: GATCTTTCCAGAATTTGGCAAGGAATGTTGACCATA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCATGAAACAGGCCCATaGTTTCTACAACTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMHETGP*FLQLVF
Trigger: AAAGACAAGTTGTAGAAACAATGGGCCTGTTTCATG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTGCTGCATCAAATTTaGCCTGTACTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMLLHQI*PVLYPA
Trigger: AGCTGGATAAAGTACAGGCAAAATTTGATGCAGCAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTGAATTCTTTACTTaGCTGGGTCCACCGGATTTT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFEFFT*LGPPDF
Trigger: AAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGAGTACAAACAGGAATTaGTGGTTTTCGTATAGGCCT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMSTNRN*WFSYRP
Trigger: AGGCCTATACGAAAACCACAAATTCCTGTTTGTACT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGATGTCCAGAAGGTCTaGATTAATTCCAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMDVQKV*INSSKC
Trigger: ACATTTGCTGGAATTAATCAAGACCTTCTGGACATC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp AAATTCTTTTCTAATACATTATCCAAGGCTGGATCCAGCTCTTCATaGATGTCCTCAATGAGAAGGGGTCGGCCCAAGGAAAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KFFSNTLSKAGSSSS*MSSMRRGRPKERLS
Trigger: GGACAGCCTTTCCTTGGGCCGACCCCTTCTCATTGAGGACATTCATGAAGAGCTGGATCCAGCCTTGGATAATGTATTAGAAAAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp CAAACCCTCTATCTGAACCTGATGGGCTACTGCGTTTTGCAGTTCTaGATAAGTATTACTATCCAGTTGCAGTCCTGGGAACAGGTCATT +
Preference number: 5 (lower is better)
Translates to: QTLYLNLMGYCVLQF*ISITIQLQSWEQVI
Trigger: AATGACCTGTTCCCAGGACTGCAACTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATAGAGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp GGGTGGATGGTTAATCAAACCCTCTATCTGAACCTGATGGGCTACTaGGTTTTGCAGTTCTGCATAAGTATTACTATCCAGTTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: GWMVNQTLYLNLMGY*VLQFCISITIQLQS
Trigger: GGACTGCAACTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATAGAGGGTTTGATTAACCATCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp CCAACTTGCTTTCATGCTGCCGTAAGAAGGCTTCAAGCTTTTCTCTaGTTTCTAATTCCAGAAGGGCTCCTAAACTCCACATTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: PTCFHAAVRRLQAFL*FLIPEGLLNSTLGQ
Trigger: TTGGCCTAATGTGGAGTTTAGGAGCCCTTCTGGAATTAGAAAGCAGAGAAAAGCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp TTCATTGCTGCATCAAATTTTGCCTGTACTTTATCCAGCTCAGCTTaGTTCTCATCCAGCAGGGCTTGTGCCTTCCCTAACTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: FIAASNFACTLSSSA*FSSSRACAFPNSAL
Trigger: TAATGCTGAGTTAGGGAAGGCACAAGCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAAAGTACAGGCAAAATTTGATGCAGCAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCAGATTCTCCCTGCTaGGACTGGTTTAAAGCACCC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLSDSPC*DWFKAP
Trigger: GGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGGCATTAATCAAATTTaGTATTCCATGTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMGINQI*YSMCHG
Trigger: TCCATGGCACATGGAATACAAAATTTGATTAATGCC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGCAAATTCTGTCCTTCTaGGATCCAGAATGTCATATT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMQILSF*DPECHI
Trigger: AATATGACATTCTGGATCCAAGAAGGACAGAATTTG...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGACAACTTCCAAAATTTaGGGATCGAAATTAACCAGC +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMTTSKI*GSKLTS
Trigger: GCTGGTTAATTTCGATCCCAAAATTTTGGAAGTTGT...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTTTGTGTATGTCTCATaGAGGGTCAACATATCTTCT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMFVYVS*RVNISS
Trigger: AGAAGATATGTTGACCCTCAATGAGACATACACAAA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTGATGGGACGGATTaGCTGTTGCCCCCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLDGTD*LLPPVS
Trigger: GCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCTGGGAATGACAGACTaGATGGGACGGATTTGCTGT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLLGMTD*MGRICC
Trigger: ACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGTGTACTGAAACAGCTTaGCTCTGCAATTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMCTETA*LCNLLK
Trigger: TTTCAACAAATTGCAGAGCAAAGCTGTTTCAGTACA...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCCTGGGAACAGGTCATaGATTAAGCTGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLPGNRS*IKLRNR
Trigger: CCTGTTCCTCAGCTTAATCAATGACCTGTTCCCAGG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCACACCGCCTTCTTCTTaGGAGGGAATTAACCCTTCC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLTPPSS*EGINPS
Trigger: GGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTGT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACGTGATCTCCTCCTaGGTCTGTCTCAGAACTTCA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLDVISS*VCLRTS
Trigger: TGAAGTTCTGAGACAGACCAAGGAGGAGATCACGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp CTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTGCCCTGAGCAGATGGAAATGGAAATTGGTACCTACTaGAGGGAAAAGTTTACAACT +
Preference number: 5 (lower is better)
Translates to: LNSTGCLCGFWCPEQMEMEIGTY*REKFTT
Trigger: AGTTGTAAACTTTTCCCTCAAGTAGGTACCAATTTC...CATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS GCA 90 bp ATCATTTGGCTTGATAGTATTCAGGGCTGCTTCTGCTTCTTCCAGTaGAGGTTTAGCTGCCTCAAGCTTGCTTTCAGCTTTCACTTTTTC +
Preference number: 5 (lower is better)
Translates to: IIWLDSIQGCFCFFQ*RFSCLKLAFSFHFF
Trigger: GAAAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATCAAGCCAAATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp TGCAAGCCTCTGTCGAACTCTATTCAGATCCGCTTCATGATCATCTaGAAGAACTATCCCTTCTTCAGAAGGAATGAGATCCCGATAATC +
Preference number: 5 (lower is better)
Translates to: CKPLSNSIQIRFMII*KNYPFFRRNEIPII
Trigger: GATTATCGGGATCTCATTCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCGGATCTGAATAGAGTTCGACAGAGGCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAAGCACCCCAGTTGTTaGTTGCAAGAACAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLKHPSC*LQEQLV
Trigger: TACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGTCACCTCATTGATGTaGTCAGATACTGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLVTSLM*SDTAGR
Trigger: TCTCCCTGCAGTATCTGACAACATCAATGAGGTGAC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGACTGTGCAAGACCTTaGAAAATCCTTCCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLDCARP*KILPRP
Trigger: AGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGTC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGTATTACTATCCAGTaGCAGTCCTGGGAACAGGTC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLSITIQ*QSWEQV
Trigger: GACCTGTTCCCAGGACTGCAACTGGATAGTAATACT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGCTGTGAGGAAGCCTaGGGGATTAAAGAAACCAGT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLCCEEA*GIKETS
Trigger: ACTGGTTTCTTTAATCCCCAAGGCTTCCTCACAGCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 90 bp CTGCTGACCTCCAGGGTTAACTGGATCATACGGTTAATGGCTTGTTaGATGTCATCCAAACTAGGAATCATCACCACATTAGGAATTGCA +
Preference number: 5 (lower is better)
Translates to: LLTSRVNWIIRLMAC*MSSKLGIITTLGIA
Trigger: TGCAATTCCTAATGTGGTGATGATTCCTAGTTTGGATGACATTCAACAAGCCATTAACCGTATGATCCAGTTAACCCTGGAGGTCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp AGAAGGGCTCCTAAACTCCACATTAGGCCAAACACAAATAATTTATaGAGATGTTCGACACAGGAAACACCGCCTTCTTCTTTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RRAPKLHIRPNTNNL*RCSTQETPPSSLEG
Trigger: TCCCTCCAAAGAAGAAGGCGGTGTTTCCTGTGTCGAACATCTTCATAAATTATTTGTGTTTGGCCTAATGTGGAGTTTAGGAGCCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp TTTATGGAAGCCACTGCCAACTCCTTCTCCTTGACTGCAAGATCCTaGGAGAGTTTAGCAACAGATTCACTTGCCTCCATTAGTTTATCA +
Preference number: 5 (lower is better)
Translates to: FMEATANSFSLTARS*ESLATDSLASISLS
Trigger: TGATAAACTAATGGAGGCAAGTGAATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGGCAGTGGCTTCCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp AGCATCGGCTTCCACATGGGTAAATTACTGATGTCCAGAAGGTCTTaGTTAATTCCAGCAAATGTTCTTTTCAAACCTGCGCGTACACCT +
Preference number: 5 (lower is better)
Translates to: SIGFHMGKLLMSRRS*LIPANVLFKPARTP
Trigger: AGGTGTACGCGCAGGTTTGAAAAGAACATTTGCTGGAATTAATCAAGACCTTCTGGACATCAGTAATTTACCCATGTGGAAGCCGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 90 bp AGGAAGAATACACGACGCTGCATCAGAGCCAATATTTTCTTCAACTaGACGAGTAAGATGTGCATTAAACCACTGCTCATCTTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: RKNTRRCIRANIFFN*TSKMCIKPLLIFRS
Trigger: ACTCCTGAAGATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp GATAGTATTCAGGGCTGCTTCTGCTTCTTCCAGTGCAGGTTTAGCTaGCTCAAGCTTGCTTTCAGCTTTCACTTTTTCACTATCAATTTC +
Preference number: 5 (lower is better)
Translates to: DSIQGCFCFFQCRFS*LKLAFSFHFFTINF
Trigger: GAAATTGATAGTGAAAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp ATCACCAGTTGGTTCTGGCATCTCACGAAGAAAATCCACAAAGTATaGTTCAGGAAGAATACACGACGCTGCATCAGAGCCAATATTTTC +
Preference number: 5 (lower is better)
Translates to: ITSWFWHLTKKIHKV*FRKNTRRCIRANIF
Trigger: GAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTTCCTGAACCATACTTTGTGGATTTTCTTCGTGAGATGCCAGAACCAACTGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp GGGTACTTCAAACACAGAGTCTTCAGGTTCATCACCAGTTGGTTCTaGCATCTCACGAAGAAAATCCACAAAGTATGGTTCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GYFKHRVFRFITSWF*HLTKKIHKVWFRKN
Trigger: ATTCTTCCTGAACCATACTTTGTGGATTTTCTTCGTGAGATGCCAGAACCAACTGGTGATGAACCTGAAGACTCTGTGTTTGAAGTACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCAGTTTTCCTGTGTTTaGATGGGTCACGTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLQFSCV*MGHVSS
Trigger: ACTACTGACGTGACCCATCAAAACACAGGAAAACTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACTTAGAAATATCCTaGTGCTCCGCTACCCCCGGG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNLEIS*CSATPG
Trigger: CCCGGGGGTAGCGGAGCACAAGGATATTTCTAAGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCAGTCAGAGAGGGGTaGTTAGCCAAAAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLSVREG*LAKNSF
Trigger: GAAGGAATTTTTGGCTAACAACCCCTCTCTGACTGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAACATCTTCCATGCCTaGGCCTCGATGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNIFHA*ASMDKA
Trigger: GGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCATAGGCTTCTTCAATaGGTCCCAAAGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLHRLLQ*VPKSCP
Trigger: TGGACATGACTTTGGGACCAATTGAAGAAGCCTATG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCCGATTCGGTTCCTTaGAGCAGGAGCTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPDSVP*SRSSPF
Trigger: AAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGGTCTGGCTCTTTTTaGAGATCCAAGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLWSGSF*RSKSPQ
Trigger: TTGAGGACTCTTGGATCTCAAAAAAGAGCCAGACCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCATCTGTCCAGTCATaGGTAGCAGTGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPSVQS*VAVSSL
Trigger: CAGACTGGACACTGCTACCAATGACTGGACAGATGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTCACCTTAGTCCATaGCCACAGCACTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLHLSP*PQHSTH
Trigger: GTGGGTAGAGTGCTGTGGCAATGGACTAAGGTGAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTATCCAGCTCAGCTaGCTTCTCATCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFIQLS*LLIQQG
Trigger: GCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTCACCGACTTTCACCTaGAAAGTGGTGCCAGATTTA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLSPTFT*KVVPDL
Trigger: TAAATCTGGCACCACTTTCAAGGTGAAAGTCGGTGA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGGCACGGGTCACTTCTaGCCTCATTGCTGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISGTGHF*PHCCEE
Trigger: TTCCTCACAGCAATGAGGCAAGAAGTGACCCGTGCC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATACAGCTTGGGGTCCTaGGGTGCCGTGGAGTTAATG +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISYSLGS*GAVELM
Trigger: CATTAACTCCACGGCACCCAAGGACCCCAAGCTGTA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS TCA 90 bp CTTGAAAGAAGCTTTCCAGTGTTAAAGACGACCATGTTAACACTGTaGGTCCTTGCCTCAACACAGATTCCACCTTTTTCATTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LERSFPVLKTTMLTL*VLASTQIPPFSFLG
Trigger: CCCCAAAAATGAAAAAGGTGGAATCTGTGTTGAGGCAAGGACTCACAGTGTTAACATGGTCGTCTTTAACACTGGAAAGCTTCTTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp AATGCTGCAAAACTCAGATTTTGGTTGGTCCAATTCTCAATCACCTaGGTCAGCTTGGCTTCGATATCCTTCTCCTTAATGGCAGATATG +
Preference number: 5 (lower is better)
Translates to: NAAKLRFWLVQFSIT*VSLASISFSLMADM
Trigger: CATATCTGCCATTAAGGAGAAGGATATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp TACAACTTGTCTTTTAATTTCACTAGAGCAGACAATATTATAGTCTaGAAGGAAGTAGGAGGCCACAGCAATCAGAGCCTCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: YNLSFNFTRADNIIV*KEVGGHSNQSLPWP
Trigger: TGGCCAAGGGAGGCTCTGATTGCTGTGGCCTCCTACTTCCTTTCAGACTATAATATTGTCTGCTCTAGTGAAATTAAAAGACAAGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp ATGTGCTCTTCGGCGGTATCTTTGGAAATAACTTTCACAGCTCTCTaGAACCATGTCATGAAACAGGCCCATTGTTTCTACAACTTGTCT +
Preference number: 5 (lower is better)
Translates to: MCSSAVSLEITFTAL*NHVMKQAHCFYNLS
Trigger: AGACAAGTTGTAGAAACAATGGGCCTGTTTCATGACATGGTTTCAGAGAGCTGTGAAAGTTATTTCCAAAGATACCGCCGAAGAGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp AGTAACTCAACAGTCTCTTCATTTATAGTGTCCTTAGGGAACTGCTaGAGGCTCCACAGGAATCCTGTTGCACTCATCAACTTTAATGAC +
Preference number: 5 (lower is better)
Translates to: SNSTVSSFIVSLGNC*RLHRNPVALINFND
Trigger: GTCATTAAAGTTGATGAGTGCAACAGGATTCCTGTGGAGCCTTCAGCAGTTCCCTAAGGACACTATAAATGAAGAGACTGTTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp CGCTGCATCAGAGCCAATATTTTCTTCAACTGCACGAGTAAGATGTaGATTAAACCACTGCTCATCTTCAGGAGTTATAAATCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RCIRANIFFNCTSKM*IKPLLIFRSYKSVC
Trigger: GCAGACAGATTTATAACTCCTGAAGATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGAAAATATTGGCTCTGATGCAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp ACGAAGAAAATCCACAAAGTATGGTTCAGGAAGAATACACGACGCTaGATCAGAGCCAATATTTTCTTCAACTGCACGAGTAAGATGTGC +
Preference number: 5 (lower is better)
Translates to: TKKIHKVWFRKNTRR*IRANIFFNCTSKMC
Trigger: GCACATCTTACTCGTGCAGTTGAAGAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTTCCTGAACCATACTTTGTGGATTTTCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTTAAAGCACCCCAGTaGTTTGTTGCAAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLFKAPQ*FVARTA
Trigger: AGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCAGATTCTCCCTGCTaGGACTGGTTTAAAGCACCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSDSPC*DWFKAP
Trigger: GGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGGGAATGACAGACTaGATGGGACGGATTTGCTGT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLGMTD*MGRICC
Trigger: ACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAGCTTCTGCAGCAAGTaGAGTTCTTTTCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLSFCSK*SSFLVL
Trigger: CAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGCT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTATTCTGAAAACGTTTaGCTTCCTGAGGCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLYSENV*LPEAAV
Trigger: AACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAATA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCTGGGAACAGGTCATaGATTAAGCTGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPGNRS*IKLRNR
Trigger: CCTGTTCCTCAGCTTAATCAATGACCTGTTCCCAGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATGGGCTACTGCGTTTaGCAGTTCTGCATAAGTATT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLMGYCV*QFCISI
Trigger: AATACTTATGCAGAACTGCAAAACGCAGTAGCCCAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACACCGCCTTCTTCTTaGGAGGGAATTAACCCTTCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTPPSS*EGINPS
Trigger: GGAAGGGTTAATTCCCTCCAAAGAAGAAGGCGGTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTGAAGTCTCCAGGCTaGTCCAAGCTGTACATTCCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVKSPG*SKLYIP
Trigger: AGGAATGTACAGCTTGGACAAGCCTGGAGACTTCAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTGCTGCACTCGTGTTaGAAAAGGGACAGGAGAGTA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLHSC*KRDRRV
Trigger: TACTCTCCTGTCCCTTTTCAAACACGAGTGCAGCAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTAGCTGCCTCAAGCTaGCTTTCAGCTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLLAASS*LSAFTF
Trigger: AAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGCAATATCATTTGGCTaGATAGTATTCAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLAISFG*IVFRAA
Trigger: AGCAGCCCTGAATACTATCAAGCCAAATGATATTGC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCAGCTGCTGTCTGCTaGGTAGTTCGAAGTACACCA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSAAVC*VVRSTP
Trigger: TGGTGTACTTCGAACTACCAAGCAGACAGCAGCTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGCCAATGCATCAATTaGATTGGTGGGGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGQCIN*IGGVRS
Trigger: GGATCTGACCCCACCAATCAAATTGATGCATTGGCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGCAGGAGCAGTCTCTaGTCACATACCTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSRSSL*SHTCCI
Trigger: AATGCAGCAGGTATGTGACAAGAGACTGCTCCTGCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp ACTTCCACAGACTCAAGTAGATTGCTTTTAAACTTTGGCTGCACTTaGACTAGGTCCTCTTGTACTGAAACAGCTTTGCTCTGCAATTTG +
Preference number: 5 (lower is better)
Translates to: TSTDSSRLLLNFGCT*TRSSCTETALLCNL
Trigger: CAAATTGCAGAGCAAAGCTGTTTCAGTACAAGAGGACCTAGTTCAAGTGCAGCCAAAGTTTAAAAGCAATCTACTTGAGTCTGTGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp AACCTCATAATCAGTCACAGGCAATCCAAAAAGTTGTTCACCAGATaGATACGTAACAAATTTCCTCCACAGATCATCGAAACTGGCCTG +
Preference number: 5 (lower is better)
Translates to: NLIISHRQSKKLFTR*IRNKFPPQIIETGL
Trigger: CAGGCCAGTTTCGATGATCTGTGGAGGAAATTTGTTACGTATTCATCTGGTGAACAACTTTTTGGATTGCCTGTGACTGATTATGAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp TGTGCAAGACCTTTGAAAATCCTTCCTAGGCCTCTGAAATCCATTTaGTCTGAGCAATTGAACACGACCACATATTTTCCCAAACACCTT +
Preference number: 5 (lower is better)
Translates to: CARPLKILPRPLKSI*SEQLNTTTYFPKHL
Trigger: AAGGTGTTTGGGAAAATATGTGGTCGTGTTCAATTGCTCAGATCAAATGGATTTCAGAGGCCTAGGAAGGATTTTCAAAGGTCTTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp GGCTGCATTGTCTATATACAATTTCATCATTTTTGCCCCTTTAGTTaGTCCAGCAATAGTTCGACCACATTCAATACCAGGTACATCTCC +
Preference number: 5 (lower is better)
Translates to: GCIVYIQFHHFCPFS*SSNSSTTFNTRYIS
Trigger: GGAGATGTACCTGGTATTGAATGTGGTCGAACTATTGCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTGTATATAGACAATGCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000449981.6
CDS GCA 90 bp TTTGAGCCTTTAGGTATTTCTGGTAAGTCCAACTTGCTTTCATGCTaGCGTAAGAAGGCTTCAAGCTTTTCTCTGCTTTCTAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: FEPLGISGKSNLLSC*RKKASSFSLLSNSR
Trigger: TCTGGAATTAGAAAGCAGAGAAAAGCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGAAATACCTAAAGGCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp TGTATTCTTCATTCAGATATCGACAGAGTAACATCTTCCATGCCTTaGCCTCGATGGATAAGGCCAATTTCATCGGCTCTGTATGTAATT +
Preference number: 5 (lower is better)
Translates to: CILHSDIDRVTSSMP*PRWIRPISSALYVI
Trigger: AATTACATACAGAGCCGATGAAATTGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTTACTCTGTCGATATCTGAATGAAGAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp CCCCTTCTCATTACGAGATATCTGGTTCATAATTTCTGCAAATTGTaGAAGTTTACTCAGCTCCACAAGATTCAGCCAAGTCATGTCAAG +
Preference number: 5 (lower is better)
Translates to: PLLITRYLVHNFCKL*KFTQLHKIQPSHVK
Trigger: CTTGACATGACTTGGCTGAATCTTGTGGAGCTGAGTAAACTTCCACAATTTGCAGAAATTATGAACCAGATATCTCGTAATGAGAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp AGTTCATTCAGCAATATTGAACGTCTTCTGCATGTCTGGCCACTGTaGCTACATAAAAGACTAAGGACTTCTCCAAAGCAAAATGCACAA +
Preference number: 5 (lower is better)
Translates to: SSFSNIERLLHVWPL*LHKRLRTSPKQNAQ
Trigger: TTGTGCATTTTGCTTTGGAGAAGTCCTTAGTCTTTTATGTAGCCACAGTGGCCAGACATGCAGAAGACGTTCAATATTGCTGAATGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTATCCGGGGCTGCATaGTCTATATACAATTTCATC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLLSGAA*SIYNFI
Trigger: GATGAAATTGTATATAGACAATGCAGCCCCGGATAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAGCACCCCAGTTGTTaGTTGCAAGAACAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKHPSC*LQEQLV
Trigger: TACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATTTTAGCAATCTCTTaGCCTGTTCTGGTACATCCA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLILAIS*PVLVHP
Trigger: TGGATGTACCAGAACAGGCAAAGAGATTGCTAAAAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCATACGGTTAATGGCTaGTTGAATGTCATCCAAACT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLHTVNG*LNVIQT
Trigger: AGTTTGGATGACATTCAACAAGCCATTAACCGTATG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACTGGGAATGACAGACTaGATGGGACGGATTTGCTGT +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLGMTD*MGRICC
Trigger: ACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATATCTGTAGCCTGTaGCTAGCTTCTTGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNICSL*LASWGG
Trigger: ACCACCCCAAGAAGCTAGCAACAGGCTACAGATATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAAACTCAGATTTTGGTaGGTCCAATTCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLKLRFW*VQFSIT
Trigger: GGTGATTGAGAATTGGACCAACCAAAATCTGAGTTT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGTCACCTCATTGATGTaGTCAGATACTGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHVTSLM*SDTAGR
Trigger: TCTCCCTGCAGTATCTGACAACATCAATGAGGTGAC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTGCGATCATAGTCTTTaGCATGAAATGTCACCTCAT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLCDHSL*HEMSPH
Trigger: ATGAGGTGACATTTCATGCAAAAGACTATGATCGCA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTTCTGATTGGTCACTaGCATGATTTTCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLFLIGH*HDFPVI
Trigger: GATGACAGGAAAATCATGCAAGTGACCAATCAGAAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGACTGTGCAAGACCTTaGAAAATCCTTCCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHDCARP*KILPRP
Trigger: AGGCCTAGGAAGGATTTTCAAAGGTCTTGCACAGTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTATTACTATCCAGTaGCAGTCCTGGGAACAGGTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSITIQ*QSWEQV
Trigger: GACCTGTTCCCAGGACTGCAACTGGATAGTAATACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAGGCGTTCTCGATATaGTGGACTTCAAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEAFSI*WTSNRS
Trigger: GCTTCTGTTTGAAGTCCACAATATCGAGAACGCCTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCCAGAAGATTGAGAGATaGCACAATATAGTTGCACTC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLQKIER*HNIVAL
Trigger: GAGTGCAACTATATTGTGCAATCTCTCAATCTTCTG...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTGGTAAGTCCAACTaGCTTTCATGCTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSGKSN*LSCCRK
Trigger: CTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTATGGTCAACATTCCTaGCCAAATTCTGGAAAGATC +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLYGQHS*PNSGKI
Trigger: GATCTTTCCAGAATTTGGCAAGGAATGTTGACCATA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTCGTGCAAACAAGTaGGAGATCTCCCCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSRANK*EISPED
Trigger: ATCTTCAGGGGAGATCTCCAACTTGTTTGCACGAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCTTGCTGCATCAAATTTaGCCTGTACTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLLLHQI*PVLYPA
Trigger: AGCTGGATAAAGTACAGGCAAAATTTGATGCAGCAA...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTTTTGCCTTGAGTTaGTGGGTCTATGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSFALS*WVYEEW
Trigger: CCACTCCTCATAGACCCACAAACTCAAGGCAAAACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp TCTGTGTACTTCTCCTCCAAAGAATCTGCAATATACTTTCTTGCTTaGAAAACAGTACGGTCTGGGCACCAAGACCTGATAAGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: SVYFSSKESAIYFLA*KTVRSGHQDLISKS
Trigger: ACTTTTACTTATCAGGTCTTGGTGCCCAGACCGTACTGTTTTTCAAGCAAGAAAGTATATTGCAGATTCTTTGGAGGAGAAGTACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp AAATGCATTAGTTCATTCAGCAATATTGAACGTCTTCTGCATGTCTaGCCACTGTGGCTACATAAAAGACTAAGGACTTCTCCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: KCISSFSNIERLLHV*PLWLHKRLRTSPKQ
Trigger: TTGCTTTGGAGAAGTCCTTAGTCTTTTATGTAGCCACAGTGGCCAGACATGCAGAAGACGTTCAATATTGCTGAATGAACTAATGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATGTTTCCTGTAGATaGGGAAGGCCACTCATACTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNVSCR*GRPLIL
Trigger: GAGTATGAGTGGCCTTCCCAATCTACAGGAAACATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAAGCACCCCAGTTGTTaGTTGCAAGAACAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISKHPSC*LQEQLV
Trigger: TACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACCTGTTCGATCTGTTaGTACCATACCATCAGCACT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTCSIC*YHTIST
Trigger: AGTGCTGATGGTATGGTACAAACAGATCGAACAGGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATGGTTATAGAGAGGTaGACACACTTTTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLMVIER*THFFQS
Trigger: ACTTTGGAAAAAGTGTGTCAACCTCTCTATAACCAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCGGCATTAATCAAATTTaGTATTCCATGTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLGINQI*YSMCHG
Trigger: TCCATGGCACATGGAATACAAAATTTGATTAATGCC...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCATCCAGAATGTCATATaGCTTTTTCTTAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLIQNVI*LFLNPL
Trigger: CAAGGGGTTAAGAAAAAGCAATATGACATTCTGGAT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGTTTTCCTGTGTTTaGATGGGTCACGTCAGTAGT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFSCV*MGHVSS
Trigger: ACTACTGACGTGACCCATCAAAACACAGGAAAACTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCAGTCAGAGAGGGGTaGTTAGCCAAAAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSVREG*LAKNSF
Trigger: GAAGGAATTTTTGGCTAACAACCCCTCTCTGACTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATAGGCTTCTTCAATaGGTCCCAAAGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHRLLQ*VPKSCP
Trigger: TGGACATGACTTTGGGACCAATTGAAGAAGCCTATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCTCCACAGGACCTTaGGCCATAACAGAATTATCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHISTGP*AITELS
Trigger: GGATAATTCTGTTATGGCCAAAGGTCCTGTGGAGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGGTCTGGCTCTTTTTaGAGATCCAAGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHWSGSF*RSKSPQ
Trigger: TTGAGGACTCTTGGATCTCAAAAAAGAGCCAGACCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAGTATTACTATCCAGTaGCAGTCCTGGGAACAGGTC +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSITIQ*QSWEQV
Trigger: GACCTGTTCCCAGGACTGCAACTGGATAGTAATACT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCACCGACTTTCACCTaGAAAGTGGTGCCAGATTTA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSPTFT*KVVPDL
Trigger: TAAATCTGGCACCACTTTCAAGGTGAAAGTCGGTGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp AGAGTAATTAAGGAATTACTGGGGAGAAAAGACACACACATCACTGAGTCCCTCAATATACTTTCTTGCTaGAAAAACAGTACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RVIKELLGRKDTHITESLNILSC*KNSTVW
Trigger: CCAGACCGTACTGTTTTTCAAGCAAGAAAGTATATT...GAGGGACTCAGTGATGTGTGTGTCTTTTCTCCCCAGTAATTCCTTAATTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCACATACCTGCTGCATaGACATCTGAATCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHIPAA*TSESAF
Trigger: GAAAGCTGATTCAGATGTCAATGCAGCAGGTATGTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp GCCTCTAACTCCTGTTTCTCTGTTAGAATGACTCTCCTTAGTAACTaGTTCTCAAGTCCTTTCATTGTAACAGTGAAATCAATGACTGAC +
Preference number: 5 (lower is better)
Translates to: ASNSCFSVRMTLLSN*FSSPFIVTVKSMTD
Trigger: GTCAGTCATTGATTTCACTGTTACAATGAAAGGACTTGAGAATCAGTTACTAAGGAGAGTCATTCTAACAGAGAAACAGGAGTTAGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 90 bp CCAATATTTTCTTCAACTGCACGAGTAAGATGTGCATTAAACCACTaGTCATCTTCAGGAGTTATAAATCTGTCTGCAATTACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PIFSSTARVRCALNH*SSSGVINLSAITLL
Trigger: CAGCAGAGTAATTGCAGACAGATTTATAACTCCTGAAGATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGAAAATATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTAAAGCACCCCAGTaGTTTGTTGCAAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFKAPQ*FVARTA
Trigger: AGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAACCTGTTCGATCTGTTaGTACCATACCATCAGCACT +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISTCSIC*YHTIST
Trigger: AGTGCTGATGGTATGGTACAAACAGATCGAACAGGT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCACATGCTTACTTTaGTGGTTTAGAATGTCAGCC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSTCLL*WFRMSA
Trigger: GGCTGACATTCTAAACCACAAAAGTAAGCATGTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACGGTTAATGGCTTGTaGAATGTCATCCAAACTAGG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTVNGL*NVIQTR
Trigger: CCTAGTTTGGATGACATTCAACAAGCCATTAACCGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGCTTCTGCAGCAAGTaGAGTTCTTTTCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSFCSK*SSFLVL
Trigger: CAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTATTCTGAAAACGTTTaGCTTCCTGAGGCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYSENV*LPEAAV
Trigger: AACAGCTGCCTCAGGAAGCAAAACGTTTTCAGAATA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGGGCTACTGCGTTTaGCAGTTCTGCATAAGTATT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMGYCV*QFCISI
Trigger: AATACTTATGCAGAACTGCAAAACGCAGTAGCCCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCAAGAGCTGCATTTaGGGATTGAGATTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSKSCI*GLRFSF
Trigger: GAAGCTAAATCTCAATCCCAAAATGCAGCTCTTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTTCGGCGGTATCTTaGGAAATAACTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSSAVS*EITFTA
Trigger: AGCTGTGAAAGTTATTTCCAAAGATACCGCCGAAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTAGCTGCCTCAAGCTaGCTTTCAGCTTTCACTTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLAASS*LSAFTF
Trigger: AAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGCAATATCATTTGGCTaGATAGTATTCAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHAISFG*IVFRAA
Trigger: AGCAGCCCTGAATACTATCAAGCCAAATGATATTGC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCCACAGGAATCCTGTaGCACTCATCAACTTTAATG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSTGIL*HSSTLM
Trigger: CATTAAAGTTGATGAGTGCAACAGGATTCCTGTGGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTCTAGCAATAATGTaGCAGCAGGAGCAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFLAIM*QQEQSL
Trigger: AAGAGACTGCTCCTGCTGCAACATTATTGCTAGAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp AGCACTCTACCCACTGAGACTAAATTCACAATCATCTCACATATTTaGGGCTTGAAACTTCTACAAGGATCAAAGTATCCACATCCAATA +
Preference number: 5 (lower is better)
Translates to: STLPTETKFTIISHI*GLKLLQGSKYPHPI
Trigger: TATTGGATGTGGATACTTTGATCCTTGTAGAAGTTTCAAGCCTCAAATATGTGAGATGATTGTGAATTTAGTCTCAGTGGGTAGAGTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTATCCGGGGCTGCATaGTCTATATACAATTTCATC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLSGAA*SIYNFI
Trigger: GATGAAATTGTATATAGACAATGCAGCCCCGGATAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAATTCTTTAGCAGTTaGGAGTGTGCAACATTTAGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQFFSS*ECATFS
Trigger: GCTAAATGTTGCACACTCCAAACTGCTAAAGAATTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCTTTACCGTCCGGACTaGATAAAATGTCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLYRPD*IKCLSF
Trigger: AAAACTCAGACATTTTATCAAGTCCGGACGGTAAAG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATTTTAGCAATCTCTTaGCCTGTTCTGGTACATCCA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHILAIS*PVLVHP
Trigger: TGGATGTACCAGAACAGGCAAAGAGATTGCTAAAAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAATCAACACAGTTTaGGCTATCTCCTTCAGAACT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEINTV*AISFRT
Trigger: AGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAACGGTTAATGGCTTGTaGAATGTCATCCAAACTAGG +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISTVNGL*NVIQTR
Trigger: CCTAGTTTGGATGACATTCAACAAGCCATTAACCGT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATACGGTTAATGGCTaGTTGAATGTCATCCAAACT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHTVNG*LNVIQT
Trigger: AGTTTGGATGACATTCAACAAGCCATTAACCGTATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAGACTCAAGTAGATaGCTTTTAAACTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTDSSR*LLNFGC
Trigger: GCAGCCAAAGTTTAAAAGCAATCTACTTGAGTCTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAAGCTTCTGCAGCAAGTaGAGTTCTTTTCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISSFCSK*SSFLVL
Trigger: CAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGCT...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAAACTCAGATTTTGGTaGGTCCAATTCTCAATCACC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHKLRFW*VQFSIT
Trigger: GGTGATTGAGAATTGGACCAACCAAAATCTGAGTTT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCGATCATAGTCTTTaGCATGAAATGTCACCTCAT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCDHSL*HEMSPH
Trigger: ATGAGGTGACATTTCATGCAAAAGACTATGATCGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTCTGATTGGTCACTaGCATGATTTTCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFLIGH*HDFPVI
Trigger: GATGACAGGAAAATCATGCAAGTGACCAATCAGAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAGAAGATTGAGAGATaGCACAATATAGTTGCACTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQKIER*HNIVAL
Trigger: GAGTGCAACTATATTGTGCAATCTCTCAATCTTCTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCGGAATACTGTCAGTaGGATAATAATAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPEYCQ*DNNKAE
Trigger: TTCAGCCTTATTATTATCCAACTGACAGTATTCCGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCACGTAGCTTTCAATaGTTCTCTGAAACATCATTG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPRSFQ*FSETSL
Trigger: CAATGATGTTTCAGAGAACAATTGAAAGCTACGTGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTATGGTCAACATTCCTaGCCAAATTCTGGAAAGATC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHYGQHS*PNSGKI
Trigger: GATCTTTCCAGAATTTGGCAAGGAATGTTGACCATA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATGAAACAGGCCCATaGTTTCTACAACTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHETGP*FLQLVF
Trigger: AAAGACAAGTTGTAGAAACAATGGGCCTGTTTCATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTGCTGCATCAAATTTaGCCTGTACTTTATCCAGCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHLLHQI*PVLYPA
Trigger: AGCTGGATAAAGTACAGGCAAAATTTGATGCAGCAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTGAATTCTTTACTTaGCTGGGTCCACCGGATTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFEFFT*LGPPDF
Trigger: AAAATCCGGTGGACCCAGCAAAGTAAAGAATTCAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGTACAAACAGGAATTaGTGGTTTTCGTATAGGCCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSTNRN*WFSYRP
Trigger: AGGCCTATACGAAAACCACAAATTCCTGTTTGTACT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp AAGACTAAGGACTTCTCCAAAGCAAAATGCACAATCAAATTGGTGTaGCAGACTATTGAATACAACACAAGATGGTCAATGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: KTKDFSKAKCTIKLV*QTIEYNTRWSMSMT
Trigger: TGTCATTGACATTGACCATCTTGTGTTGTATTCAATAGTCTGTCACACCAATTTGATTGTGCATTTTGCTTTGGAGAAGTCCTTAGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGTACATCTCCTTCTaGGTACAAAAATTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRYISF*VQKFQC
Trigger: ACACTGAAATTTTTGTACCAAGAAGGAGATGTACCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTATCCGGGGCTGCATaGTCTATATACAATTTCATC +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISLSGAA*SIYNFI
Trigger: GATGAAATTGTATATAGACAATGCAGCCCCGGATAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATGGTTATAGAGAGGTaGACACACTTTTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHMVIER*THFFQS
Trigger: ACTTTGGAAAAAGTGTGTCAACCTCTCTATAACCAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGGCATTAATCAAATTTaGTATTCCATGTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHGINQI*YSMCHG
Trigger: TCCATGGCACATGGAATACAAAATTTGATTAATGCC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAGGTATTATAATACCTaGACACACCGTGAATCATTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHRYYNT*THRESF
Trigger: GAATGATTCACGGTGTGTCAAGGTATTATAATACCT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACATCCAGAATGTCATATaGCTTTTTCTTAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHIQNVI*LFLNPL
Trigger: CAAGGGGTTAAGAAAAAGCAATATGACATTCTGGAT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCAAATTCTGTCCTTCTaGGATCCAGAATGTCATATT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHQILSF*DPECHI
Trigger: AATATGACATTCTGGATCCAAGAAGGACAGAATTTG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACACAACTTCCAAAATTTaGGGATCGAAATTAACCAGC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHTTSKI*GSKLTS
Trigger: GCTGGTTAATTTCGATCCCAAAATTTTGGAAGTTGT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCAGAAATCAACACAGTTTaGGCTATCTCCTTCAGAACT +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISEINTV*AISFRT
Trigger: AGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTTC...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTTGTGTATGTCTCATaGAGGGTCAACATATCTTCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFVYVS*RVNISS
Trigger: AGAAGATATGTTGACCCTCAATGAGACATACACAAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTTCGCCCATAAAGGCTaGCAACAAATATTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHFAHKG*QQIFFF
Trigger: AAAGAAGAATATTTGTTGCAAGCCTTTATGGGCGAA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGTACTGAAACAGCTTaGCTCTGCAATTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCTETA*LCNLLK
Trigger: TTTCAACAAATTGCAGAGCAAAGCTGTTTCAGTACA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTGCAAAACTCAGATTTaGGTTGGTCCAATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHCKTQI*VGPILN
Trigger: ATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATGCGATCATAGTCTTTaGCATGAAATGTCACCTCAT +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISCDHSL*HEMSPH
Trigger: ATGAGGTGACATTTCATGCAAAAGACTATGATCGCA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACTCTTCATCAACCAGTTaGGAAAGGTTCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHSSSTS*ERFISL
Trigger: AAGAGATATGAACCTTTCCAAACTGGTTGATGAAGA...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCACAGAAGATTGAGAGATaGCACAATATAGTTGCACTC +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISQKIER*HNIVAL
Trigger: GAGTGCAACTATATTGTGCAATCTCTCAATCTTCTG...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACGAAAAGTTTAGACTTTaGGATAGCTGTACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHEKFRL*DSCTSG
Trigger: TCCTGAAGTACAGCTATCCAAAAGTCTAAACTTTTC...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCCATTTTCTCATTCATaGCTGCATCAAATTTTGCCT +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHPFSHS*LHQILP
Trigger: AGGCAAAATTTGATGCAGCAATGAATGAGAAAATGG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACCATAATTTCTGCAAATaGTGGAAGTTTACTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHHNFCK*WKFTQL
Trigger: GAGCTGAGTAAACTTCCACAATTTGCAGAAATTATG...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS-3UTR CAA 90 bp ATAAGCTTTCCATGCGAATATCAGGAGGAAACTAGACTGAGGTTTAAAATTCACAATATACTTTCTTGCTaGAAAAACAGTACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: ISFPCEYQEETRLRFKIHNILSC*KNSTVW
Trigger: CCAGACCGTACTGTTTTTCAAGCAAGAAAGTATATT...GTGAATTTTAAACCTCAGTCTAGTTTCCTCCTGATATTCGCATGGAAAGCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 90 bp GGTGATTTGATATGCATTTTTACCAAGTCATCAAAAATATCTCTCTaGTGCACATGGATGGTAATTAGAGTCTCGAACTTCACTCTATCA +
Preference number: 5 (lower is better)
Translates to: GDLICIFTKSSKISL*CTWMVIRVSNFTLS
Trigger: TGATAGAGTGAAGTTCGAGACTCTAATTACCATCCATGTGCATCAGAGAGATATTTTTGATGACTTGGTAAAAATGCATATCAAATCACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 90 bp GAGATTGCACAATATAGTTGCACTCCAAGAGCTGCATTTTGGGATTaGGATTTAGCTTCATATATGTGTATGTATCTTCAAAGACTTTCT +
Preference number: 5 (lower is better)
Translates to: EIAQYSCTPRAAFWD*DLASYMCMYLQRLS
Trigger: AGAAAGTCTTTGAAGATACATACACATATATGAAGCTAAATCTCAATCCCAAAATGCAGCTCTTGGAGTGCAACTATATTGTGCAATCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 90 bp CATAAAAGACTAAGGACTTCTCCAAAGCAAAATGCACAATCAAATTaGTGTGACAGACTATTGAATACAACACAAGATGGTCAATGTCAA +
Preference number: 5 (lower is better)
Translates to: HKRLRTSPKQNAQSN*CDRLLNTTQDGQCQ
Trigger: TTGACATTGACCATCTTGTGTTGTATTCAATAGTCTGTCACACCAATTTGATTGTGCATTTTGCTTTGGAGAAGTCCTTAGTCTTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS-3UTR CAA 90 bp TACTTGAGGGAAAAGTTTACAACTACTAGGCTCTTTTTAGGATGTCACATATCATTCGCCCATAAAGGCTaGCAACAAATATTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: YLREKFTTTRLFLGCHISFAHKG*QQIFFF
Trigger: AAAGAAGAATATTTGTTGCAAGCCTTTATGGGCGAA...TGATATGTGACATCCTAAAAAGAGCCTAGTAGTTGTAAACTTTTCCCTCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS GCA 72 bp GGGAGGGGCAGCCTCTTCCGTAGAGGGAGGAGCCTCTaGTCCCTCAGAAGGGGCGCCATCTTCAGCATCCTT +
Preference number: 6 (lower is better)
Translates to: GRGSLFRRGRSL*SLRRGAIFSIL
Trigger: AAGGATGCTGAAGATGGCGCCCCTTCTGAGGGAGCAGAGGCTCCTCCCTCTACGGAAGAGGCTGCCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 72 bp ATGCTTCCGCGGGTGGCTGCGGGCCGGAACTCCTCCTaGGCCGCGTTGATCTTGATCTCAGTTTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: MLPRVAAGRNSS*AALILISVSAA
Trigger: GGCTGCAGAAACTGAGATCAAGATCAACGCGGCTCAGGAGGAGTTCCGGCCCGCAGCCACCCGCGGAAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp CCGGGAAGACGGCAAGGACAGCACTTCCGAAATCACTaGCTGAACCGGTCGCGGTGCAAGCCTCTGTCGAAC +
Preference number: 6 (lower is better)
Translates to: PGRRQGQHFRNH*LNRSRCKPLSN
Trigger: GTTCGACAGAGGCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTGCTGTCCTTGCCGTCTTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS CAA 72 bp GGTGGGGCTGGGAATGACAGACTTGATGGGACGGATTaGCTGTTGCCCCCAGTGAGCCACTCCTCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: GGAGNDRLDGTD*LLPPVSHSSAD
Trigger: GTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAGCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp GTCAGTAGTGGTGGGGCTGGGAATGACAGACTTGATGGGACGGATTaGCTGTTGCCCCCAGTGAGCCACTCCTCTGCTGACCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: VSSGGAGNDRLDGTD*LLPPVSHSSADLQG
Trigger: ACCCTGGAGGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAGTCTGTCATTCCCAGCCCCACCACTACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GTAGATTGGGAAGGCCACTCATACTCCGGCGGTATCTaGAGGACCTCCGGGAAGACGGCAAGGACAGCACTT +
Preference number: 6 (lower is better)
Translates to: VDWEGHSYSGGI*RTSGKTARTAL
Trigger: AAGTGCTGTCCTTGCCGTCTTCCCGGAGGTCCTCCAGATACCGCCGGAGTATGAGTGGCCTTCCCAATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 72 bp ACAGACTTGATGGGACGGATTTGCTGTTGCCCCCAGTaGGCCACTCCTCTGCTGACCTCCAGGGTTAACTGG +
Preference number: 6 (lower is better)
Translates to: TDLMGRICCCPQ*ATPLLTSRVNW
Trigger: CCAGTTAACCCTGGAGGTCAGCAGAGGAGTGGCTCACTGGGGGCAACAGCAAATCCGTCCCATCAAGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TCTTCAGCATCCTTCTCCATCCCCCGTCGTGCGGAATaGTTTATACTTCGAAACCAGCCGCTCTCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSASFSIPRRAE*FILRNQPLSGP
Trigger: GGGCCCAGAGAGCGGCTGGTTTCGAAGTATAAAGCATTCCGCACGACGGGGGATGGAGAAGGATGCTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS GCA 72 bp GGCGCCATCTTCAGCATCCTTCTCCATCCCCCGTCGTaGGGAATGCTTTATACTTCGAAACCAGCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: GAIFSILLHPPS*GMLYTSKPAAL
Trigger: GAGAGCGGCTGGTTTCGAAGTATAAAGCATTCCGCACGACGGGGGATGGAGAAGGATGCTGAAGATGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327475.11
CDS CCA 72 bp TCAGCCAAGTCATGTCAAGGATCCAGCGATAGGGTTTaGGAGGACAGGCTTTCAGGTCCAGAGCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SAKSCQGSSDRV*EDRLSGPELLP
Trigger: GGGGAGCAGCTCTGGACCTGAAAGCCTGTCCTCCCAAACCCTATCGCTGGATCCTTGACATGACTTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GGGTCCTTGGGTGCCGTGGAGTTAATGGCAAAGATGTaGAGCACGGGTAACTGCGTGAAGAGTACCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GSLGAVELMAKM*STGNCVKSTLG
Trigger: CCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCACATCTTTGCCATTAACTCCACGGCACCCAAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 72 bp GAAGACGGCAAGGACAGCACTTCCGAAATCACTGACTaGACCGGTCGCGGTGCAAGCCTCTGTCGAACTCTA +
Preference number: 6 (lower is better)
Translates to: EDGKDSTSEITD*TGRGASLCRTL
Trigger: TAGAGTTCGACAGAGGCTTGCACCGCGACCGGTTCAGTCAGTGATTTCGGAAGTGCTGTCCTTGCCGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS GCA 72 bp TCTCCACTCAGCCCATCGATGAGAGTGGAGGCGGCCTaGATCTTTTTCCGGCACGTATCAGCGTCATTAAGC +
Preference number: 6 (lower is better)
Translates to: SPLSPSMRVEAA*IFFRHVSASLS
Trigger: GCTTAATGACGCTGATACGTGCCGGAAAAAGATGCAGGCCGCCTCCACTCTCATCGATGGGCTGAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp GGCGCCATCTTCAGCATCCTTCTCCATCCCCCGTCGTaGGGAATGCTTTATACTTCGAAACCTGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GAIFSILLHPPS*GMLYTSKPVCW
Trigger: CCAGCACACAGGTTTCGAAGTATAAAGCATTCCGCACGACGGGGGATGGAGAAGGATGCTGAAGATGGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS CAA 90 bp CTCAGAACTTCATTGTGGATGGTCACAGTGTCCAGTGCCCAGCCTTaGTGGGCACGGGTCACTTCTTGCCTCATTGCTGTGAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LRTSLWMVTVSSAQP*WARVTSCLIAVRKP
Trigger: AGGCTTCCTCACAGCAATGAGGCAAGAAGTGACCCGTGCCCACAAAGGCTGGGCACTGGACACTGTGACCATCCACAATGAAGTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 72 bp CCTAACTCAGCATTAGCAACTGCTAACCGGCCTTCCTaGTTGGCCAGGTTGGCCTTCAGAGGCAACACTTCT +
Preference number: 6 (lower is better)
Translates to: PNSALATANRPS*LARLAFRGNTS
Trigger: AGAAGTGTTGCCTCTGAAGGCCAACCTGGCCAAGCAGGAAGGCCGGTTAGCAGTTGCTAATGCTGAGTTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TCTCAGAACTTCATTGTGGATGGTCACAGTGTCCAGTaGCCAGCCTTTGTGGGCACGGGTCACTTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SQNFIVDGHSVQ*PAFVGTGHFLP
Trigger: AGGCAAGAAGTGACCCGTGCCCACAAAGGCTGGGCACTGGACACTGTGACCATCCACAATGAAGTTCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CCA 72 bp TCTCCTCCTTGGTCTGTCTCAGAACTTCATTGTGGATaGTCACAGTGTCCAGTGCCCAGCCTTTGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SPPWSVSELHCG*SQCPVPSLCGH
Trigger: GTGCCCACAAAGGCTGGGCACTGGACACTGTGACCATCCACAATGAAGTTCTGAGACAGACCAAGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 72 bp AAGATGTGGAGCACGGGTAACTGCGTGAAGAGTACCTaGGGGGTGGATTCCATGAGCTTCCCATTCCGTCTG +
Preference number: 6 (lower is better)
Translates to: KMWSTGNCVKST*GVDSMSFPFRL
Trigger: CAGACGGAATGGGAAGCTCATGGAATCCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCACATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 90 bp TTAATGGCAAAGATGTGGAGCACGGGTAACTGCGTGAAGAGTACCTaGGGGGTGGATTCCATGAGCTTCCCATTCCGTCTGTCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LMAKMWSTGNCVKST*GVDSMSFPFRLSQA
Trigger: AGCCTGGGACAGACGGAATGGGAAGCTCATGGAATCCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCACATCTTTGCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 72 bp GTGGAGTTAATGGCAAAGATGTGGAGCACGGGTAACTaGGTGAAGAGTACCTTGGGGGTGGATTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: VELMAKMWSTGN*VKSTLGVDSMS
Trigger: GCTCATGGAATCCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCACATCTTTGCCATTAACTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 72 bp GTAAATAGGACACACATACAGCTTGGGGTCCTTGGGTaGCGTGGAGTTAATGGCAAAGATGTGGAGCACGGG +
Preference number: 6 (lower is better)
Translates to: VNRTHIQLGVLG*RGVNGKDVEHG
Trigger: CCCGTGCTCCACATCTTTGCCATTAACTCCACGGCACCCAAGGACCCCAAGCTGTATGTGTGTCCTATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS GCA 72 bp TCTTCAGCATCCTTCTCCATCCCCCGTCGTGCGGAATaGTTTATACTTCGAAACCTGTGTGCTGGGTACAGC +
Preference number: 6 (lower is better)
Translates to: SSASFSIPRRAE*FILRNLCAGYS
Trigger: GCTGTACCCAGCACACAGGTTTCGAAGTATAAAGCATTCCGCACGACGGGGGATGGAGAAGGATGCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS CCA 72 bp CTGCAGGGAGATGCGGCTGTATGGTGTGGGAATCACTaGCTTGTCCAAGAATTTCCAGGAGAACTGGATCAG +
Preference number: 6 (lower is better)
Translates to: LQGDAAVWCGNH*LVQEFPGELDQ
Trigger: CTGATCCAGTTCTCCTGGAAATTCTTGGACAAGCCAGTGATTCCCACACCATACAGCCGCATCTCCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp ACCATGCCCATCCTAGAAACCGTGGCAGGAGAGGCGTTCTCGATATaGTGGACTTCAAACAGAAGCTTACAACTAGGGGCCATGGGAATG +
Preference number: 6 (lower is better)
Translates to: TMPILETVAGEAFSI*WTSNRSLQLGAMGM
Trigger: CATTCCCATGGCCCCTAGTTGTAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGCCTCTCCTGCCACGGTTTCTAGGATGGGCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp CGACCACCTCCAGGGTGGATCATTGCTGCTATGAGCTaGACATCAACAATAGTAGTGAAGTCTCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: RPPPGWIIAAMS*TSTIVVKSPGL
Trigger: CAAGCCTGGAGACTTCACTACTATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp CTAGAAACCGTGGCAGGAGAGGCGTTCTCGATATTGTaGACTTCAAACAGAAGCTTACAACTAGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: LETVAGEAFSIL*TSNRSLQLGAM
Trigger: CATGGCCCCTAGTTGTAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGCCTCTCCTGCCACGGTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp ATCCTAGAAACCGTGGCAGGAGAGGCGTTCTCGATATaGTGGACTTCAAACAGAAGCTTACAACTAGGGGCC +
Preference number: 6 (lower is better)
Translates to: ILETVAGEAFSI*WTSNRSLQLGA
Trigger: GGCCCCTAGTTGTAAGCTTCTGTTTGAAGTCCACAATATCGAGAACGCCTCTCCTGCCACGGTTTCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GCACTCGTGTTTGAAAAGGGACAGGAGAGTAGGGATTaGAGCGCACTCCTCAGCTTTTATGGTCAACATTCC +
Preference number: 6 (lower is better)
Translates to: ALVFEKGQESRD*SALLSFYGQHS
Trigger: GGAATGTTGACCATAAAAGCTGAGGAGTGCGCTTCAATCCCTACTCTCCTGTCCCTTTTCAAACACGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GCCACTGCCAACTCCTTCTCCTTGACTGCAAGATCCTaGGAGAGTTTAGCAACAGATTCACTTGCCTCCATT +
Preference number: 6 (lower is better)
Translates to: ATANSFSLTARS*ESLATDSLASI
Trigger: AATGGAGGCAAGTGAATCTGTTGCTAAACTCTCTCAGGATCTTGCAGTCAAGGAGAAGGAGTTGGCAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TCAGCACTTCCTCCAGCTGATGAACAGTTTCTGAGTTaGTGGCTGCAGCAGTTACTTCTTCAAAGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: SALPPADEQFLS*WLQQLLLQRCA
Trigger: TGCACACCTTTGAAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAGCTGGAGGAAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp CAGGGCTGCTTCTGCTTCTTCCAGTGCAGGTTTAGCTaGCTCAAGCTTGCTTTCAGCTTTCACTTTTTCACT +
Preference number: 6 (lower is better)
Translates to: QGCFCFFQCRFS*LKLAFSFHFFT
Trigger: AGTGAAAAAGTGAAAGCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAAGCAGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp GCATCAAATTTTGCCTGTACTTTATCCAGCTCAGCTTaGTTCTCATCCAGCAGGGCTTGTGCCTTCCCTAAC +
Preference number: 6 (lower is better)
Translates to: ASNFACTLSSSA*FSSSRACAFPN
Trigger: GTTAGGGAAGGCACAAGCCCTGCTGGATGAGAAGCAAGCTGAGCTGGATAAAGTACAGGCAAAATTTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTGGTaGCCTGAGCAGATGGAAATGAACTTACTTGATGTC +
Preference number: 6 (lower is better)
Translates to: SLNSTGCLCGFW*PEQMEMNLLDV
Trigger: GACATCAAGTAAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CCA 72 bp GCACTTCCTCCAGCTGATGAACAGTTTCTGAGTTGCTaGCTGCAGCAGTTACTTCTTCAAAGGTGTGCAGTT +
Preference number: 6 (lower is better)
Translates to: ALPPADEQFLSC*LQQLLLQRCAV
Trigger: AACTGCACACCTTTGAAGAAGTAACTGCTGCAGCCAGCAACTCAGAAACTGTTCATCAGCTGGAGGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GAGTCCCTCAATAGCACAGGCTGTCTATGTGGGTTCTaGTGCCCTGAGCAGATGGAAATGAACTTACTTGAT +
Preference number: 6 (lower is better)
Translates to: ESLNSTGCLCGF*CPEQMEMNLLD
Trigger: ATCAAGTAAGTTCATTTCCATCTGCTCAGGGCACCAGAACCCACATAGACAGCCTGTGCTATTGAGGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 90 bp AATAGCCTCCCGGGTCTCTCCCACACCACCTCCACTCTCTTTGGGTaGAATGTTGGTAATTGTTTCAAGAACAGCAGAAGCAGTGTTACT +
Preference number: 6 (lower is better)
Translates to: NSLPGLSHTTSTLFG*NVGNCFKNSRSSVT
Trigger: AGTAACACTGCTTCTGCTGTTCTTGAAACAATTACCAACATTCAACCCAAAGAGAGTGGAGGTGGTGTGGGAGAGACCCGGGAGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 90 bp GCTGCTATGAGCTGCACATCAACAATAGTAGTGAAGTCTCCAGGCTaGTCCAAGCTGTACATTCCTTCCATTTCCATCATCTGTCGCACA +
Preference number: 6 (lower is better)
Translates to: AAMSCTSTIVVKSPG*SKLYIPSISIICRT
Trigger: TGTGCGACAGATGATGGAAATGGAAGGAATGTACAGCTTGGACAAGCCTGGAGACTTCACTACTATTGTTGATGTGCAGCTCATAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp AGTGTGGACGAATCCCAAGACACTCTTTTCCAGAGCTaGGGTATACGAGCATCATACATGTTGTCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SVDESQDTLFQS*GIRASYMLSRA
Trigger: TGCTCTGGACAACATGTATGATGCTCGTATACCTCAGCTCTGGAAAAGAGTGTCTTGGGATTCGTCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 72 bp CAGCAGGAGCAGTCTCTTGTCACATACCTGCTGCATTaGCATCTGAATCAGCTTTCGAGCATGTACTTCTTG +
Preference number: 6 (lower is better)
Translates to: QQEQSLVTYLLH*HLNQLSSMYFL
Trigger: CAAGAAGTACATGCTCGAAAGCTGATTCAGATGTCAATGCAGCAGGTATGTGACAAGAGACTGCTCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS GCA 72 bp CTTGATAGTATTCAGGGCTGCTTCTGCTTCTTCCAGTaGAGGTTTAGCTGCCTCAAGCTTGCTTTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LDSIQGCFCFFQ*RFSCLKLAFSF
Trigger: AAAGCTGAAAGCAAGCTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp CATTCAGATATCGACAGAGTAACATCTTCCATGCCTTaGCCTCGATGGATAAGGCCAATTTCATCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: HSDIDRVTSSMP*PRWIRPISSAL
Trigger: CAGAGCCGATGAAATTGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTTACTCTGTCGATATCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp TCCAGCAAATGTTCTTTTCAAACCTGCGCGTACACCTaGGGGTGGCTCATTAGTGAATTTGAGAGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SSKCSFQTCAYT*GWLISEFERGL
Trigger: CAGACCTCTCTCAAATTCACTAATGAGCCACCCCAAGGTGTACGCGCAGGTTTGAAAAGAACATTTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 90 bp GAGCAGGAGCTCTCCTTTTCCCTTAAATGCTGCAAAACTCAGATTTaGGTTGGTCCAATTCTCAATCACCTGAGTCAGCTTGGCTTCGAT +
Preference number: 6 (lower is better)
Translates to: EQELSFSLKCCKTQI*VGPILNHLSQLGFD
Trigger: ATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCAGCATTTAAGGGAAAAGGAGAGCTCCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp AATAATGTTGCAGCAGGAGCAGTCTCTTGTCACATACCTGCTGCATaGACATCTGAATCAGCTTTCGAGCATGTACTTCTTGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: NNVAAGAVSCHIPAA*TSESAFEHVLLVLA
Trigger: GGCAAGGACAAGAAGTACATGCTCGAAAGCTGATTCAGATGTCAATGCAGCAGGTATGTGACAAGAGACTGCTCCTGCTGCAACATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 72 bp GCAAGCCTCTGTCGAACTCTATTCAGATCCGCTTCATaGTCATCTGGAAGAACTATCCCTTCTTCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: ASLCRTLFRSAS*SSGRTIPSSEG
Trigger: TCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCGGATCTGAATAGAGTTCGACAGAGGCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 72 bp CCACCAGCACATAGGAGATCTTGTTATACTGACGGATaGCAGCTTTACCGTCCGGACTTGATAAAATGTCTG +
Preference number: 6 (lower is better)
Translates to: PPAHRRSCYTDG*QLYRPDLIKCL
Trigger: CAGACATTTTATCAAGTCCGGACGGTAAAGCTGTCATCCGTCAGTATAACAAGATCTCCTATGTGCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp TGGCTTGTAAAGCGTAATGCAACTGTGAAATCTCTCTaGTCCAGGCTGTGTGATAGACCACCTCGAATTCCA +
Preference number: 6 (lower is better)
Translates to: WLVKRNATVKSL*SRLCDRPPRIP
Trigger: TGGAATTCGAGGTGGTCTATCACACAGCCTGGATCAGAGAGATTTCACAGTTGCATTACGCTTTACAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GTAGCTCCCTCTTCATCACTGAAATCAGACCTTGGGTaGTTTCATCCATCTCATCTCGTGCAAACAAGTTGG +
Preference number: 6 (lower is better)
Translates to: VAPSSSLKSDLG*FHPSHLVQTSW
Trigger: CCAACTTGTTTGCACGAGATGAGATGGATGAAATCACCCAAGGTCTGATTTCAGTGATGAAGAGGGAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp ACAGTCTCTTCATTTATAGTGTCCTTAGGGAACTGCTaGAGGCTCCACAGGAATCCTGTTGCACTCATCAAC +
Preference number: 6 (lower is better)
Translates to: TVSSFIVSLGNC*RLHRNPVALIN
Trigger: GTTGATGAGTGCAACAGGATTCCTGTGGAGCCTTCAGCAGTTCCCTAAGGACACTATAAATGAAGAGACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GGGTATCTGGTGGCCTTTGTCACAATAATGCCATTCTaGATTGAGAGATCATCTCCTGGTAATCCCTGTAGC +
Preference number: 6 (lower is better)
Translates to: GYLVAFVTIMPF*IERSSPGNPCS
Trigger: GCTACAGGGATTACCAGGAGATGATCTCTCAATTCAGAATGGCATTATTGTGACAAAGGCCACCAGATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GCAACTTCCCTGTTTCTGGATGTCGCACAAAAAGCGTaGCTTGTAAAGCGTAATGCAACTGTGAAATCTCTC +
Preference number: 6 (lower is better)
Translates to: ATSLFLDVAQKA*LVKRNATVKSL
Trigger: GAGAGATTTCACAGTTGCATTACGCTTTACAAGCCACGCTTTTTGTGCGACATCCAGAAACAGGGAAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GTTTCAGTTTCTTGGCCAATGCATCAATTTGATTGGTaGGGTCAGATCCCATGGACAGGAAGCATATCAGAG +
Preference number: 6 (lower is better)
Translates to: VSVSWPMHQFDW*GQIPWTGSISE
Trigger: CTCTGATATGCTTCCTGTCCATGGGATCTGACCCCACCAATCAAATTGATGCATTGGCCAAGAAACTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp CCAGTTTCAGTTTCTTGGCCAATGCATCAATTTGATTaGTGGGGTCAGATCCCATGGACAGGAAGCATATCA +
Preference number: 6 (lower is better)
Translates to: PVSVSWPMHQFD*WGQIPWTGSIS
Trigger: TGATATGCTTCCTGTCCATGGGATCTGACCCCACCAATCAAATTGATGCATTGGCCAAGAAACTGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp GTCTCTAGTAATTCTTCCATGAATTCCAGGCCAAGGTaGCAATTTTGTAGTAATACCCAACCACCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VSSNSSMNSRPR*QFCSNTQPPCC
Trigger: GCAGCAGGGTGGTTGGGTATTACTACAAAATTGCCACCTTGGCCTGGAATTCATGGAAGAATTACTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 72 bp TCATTCAGATATCGACAGAGTAACATCTTCCATGCCTaGGCCTCGATGGATAAGGCCAATTTCATCGGCTCT +
Preference number: 6 (lower is better)
Translates to: SFRYRQSNIFHA*ASMDKANFIGS
Trigger: AGAGCCGATGAAATTGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTTACTCTGTCGATATCTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp GTAACATCCATGATTGTGGGGTTTCTAGCAATAATGTaGCAGCAGGAGCAGTCTCTTGTCACATACCTGCTG +
Preference number: 6 (lower is better)
Translates to: VTSMIVGFLAIM*QQEQSLVTYLL
Trigger: CAGCAGGTATGTGACAAGAGACTGCTCCTGCTGCAACATTATTGCTAGAAACCCCACAATCATGGATGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449981.6
CDS TCA 72 bp GCAGTAATGGCTTTTGGATTCATTCGCATTTCTCTATaGGGCCTTCCGCATTCTGTTTGCGCCTTCATTAGA +
Preference number: 6 (lower is better)
Translates to: AVMAFGFIRISL*GLPHSVCAFIR
Trigger: TCTAATGAAGGCGCAAACAGAATGCGGAAGGCCTCATAGAGAAATGCGAATGAATCCAAAAGCCATTACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TATCTGAACCTGATGGGCTACTGCGTTTTGCAGTTCTaGATAAGTATTACTATCCAGTTGCAGTCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: YLNLMGYCVLQF*ISITIQLQSWE
Trigger: TTCCCAGGACTGCAACTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp AATATCATTTCGACCACCTCCAGGGTGGATCATTGCTaGTATGAGCTGCACATCAACAATAGTAGTGAAGTC +
Preference number: 6 (lower is better)
Translates to: NIISTTSRVDHC*YELHINNSSEV
Trigger: GACTTCACTACTATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCGAAATGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TGGAATATCATTTCGACCACCTCCAGGGTGGATCATTaGTGCTATGAGCTGCACATCAACAATAGTAGTGAA +
Preference number: 6 (lower is better)
Translates to: WNIISTTSRVDH*CYELHINNSSE
Trigger: TTCACTACTATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCGAAATGATATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp ACACGACGCTGCATCAGAGCCAATATTTTCTTCAACTaGACGAGTAAGATGTGCATTAAACCACTGCTCATC +
Preference number: 6 (lower is better)
Translates to: TRRCIRANIFFN*TSKMCIKPLLI
Trigger: GATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGAAAATATTGGCTCTGATGCAGCGTCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp AATATCATTTGGCTTGATAGTATTCAGGGCTGCTTCTaGTTCTTCCAGTGCAGGTTTAGCTGCCTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: NIIWLDSIQGCF*FFQCRFSCLKL
Trigger: AAGCTTGAGGCAGCTAAACCTGCACTGGAAGAAGCAGAAGCAGCCCTGAATACTATCAAGCCAAATGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp AAACGTTGTGGAATATCATTTCGACCACCTCCAGGGTaGATCATTGCTGCTATGAGCTGCACATCAACAATA +
Preference number: 6 (lower is better)
Translates to: KRCGISFRPPPG*IIAAMSCTSTI
Trigger: TATTGTTGATGTGCAGCTCATAGCAGCAATGATCCACCCTGGAGGTGGTCGAAATGATATTCCACAACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp AAATGTTCTTTTCAAACCTGCGCGTACACCTTGGGGTaGCTCATTAGTGAATTTGAGAGAGGTCTGAAGCAA +
Preference number: 6 (lower is better)
Translates to: KCSFQTCAYTLG*LISEFERGLKQ
Trigger: TTGCTTCAGACCTCTCTCAAATTCACTAATGAGCCACCCCAAGGTGTACGCGCAGGTTTGAAAAGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 72 bp CAAACCCTCTATCTGAACCTGATGGGCTACTGCGTTTaGCAGTTCTGCATAAGTATTACTATCCAGTTGCAG +
Preference number: 6 (lower is better)
Translates to: QTLYLNLMGYCV*QFCISITIQLQ
Trigger: CTGCAACTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATAGAGGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp ACATGCAACTTTTCACTTACCTCAGCTGCTGTCTGCTaGGTAGTTCGAAGTACACCAATGAGAGATTCGTCA +
Preference number: 6 (lower is better)
Translates to: TCNFSLTSAAVC*VVRSTPMRDSS
Trigger: TGACGAATCTCTCATTGGTGTACTTCGAACTACCAAGCAGACAGCAGCTGAGGTAAGTGAAAAGTTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp ATGGTTAATCAAACCCTCTATCTGAACCTGATGGGCTACTGCGTTTaGCAGTTCTGCATAAGTATTACTATCCAGTTGCAGTCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: MVNQTLYLNLMGYCV*QFCISITIQLQSWE
Trigger: TTCCCAGGACTGCAACTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATAGAGGGTTTGATTAACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GATCATCTGGAAGAACTATCCCTTCTTCAGAAGGAATaGGATCCCGATAATCCACCACAGAAGAAACAGCAT +
Preference number: 6 (lower is better)
Translates to: DHLEELSLLQKE*DPDNPPQKKQH
Trigger: ATGCTGTTTCTTCTGTGGTGGATTATCGGGATCTCATTCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS TCA 72 bp CCCTTTAATCTGCTCAATGATATAGTTGAACTTGGCTaGCATGCGTTTCCAGTGTTCCAATTCAGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: PFNLLNDIVELG*HAFPVFQFSEW
Trigger: CCACTCACTGAATTGGAACACTGGAAACGCATGTCAGCCAAGTTCAACTATATCATTGAGCAGATTAAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp AGCTTTCCAGTGTTAAAGACGACCATGTTAACACTGTaGGTCCTTGCCTCAACACAGATTCCACCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: SFPVLKTTMLTL*VLASTQIPPFS
Trigger: TGAAAAAGGTGGAATCTGTGTTGAGGCAAGGACTCACAGTGTTAACATGGTCGTCTTTAACACTGGAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp CCTTTAGGTATTTCTGGTAAGTCCAACTTGCTTTCATaGTGCCGTAAGAAGGCTTCAAGCTTTTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: PLGISGKSNLLS*CRKKASSFSLL
Trigger: AAGCAGAGAAAAGCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGAAATACCTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp ATCCACAAAGTATGGTTCAGGAAGAATACACGACGCTaGATCAGAGCCAATATTTTCTTCAACTGCACGAGT +
Preference number: 6 (lower is better)
Translates to: IHKVWFRKNTRR*IRANIFFNCTS
Trigger: ACTCGTGCAGTTGAAGAAAATATTGGCTCTGATGCAGCGTCGTGTATTCTTCCTGAACCATACTTTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp CTGTCGAACTCTATTCAGATCCGCTTCATGATCATCTaGAAGAACTATCCCTTCTTCAGAAGGAATGAGATC +
Preference number: 6 (lower is better)
Translates to: LSNSIQIRFMII*KNYPFFRRNEI
Trigger: GATCTCATTCCTTCTGAAGAAGGGATAGTTCTTCCAGATGATCATGAAGCGGATCTGAATAGAGTTCGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000373278.8
ENST00000449981.6
CDS CCA 72 bp TGGTTTTGCAAGTTTCCTGACTGTGGCAATATCATTTaGCTTGATAGTATTCAGGGCTGCTTCTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: WFCKFPDCGNII*LDSIQGCFCFF
Trigger: GAAGAAGCAGAAGCAGCCCTGAATACTATCAAGCCAAATGATATTGCCACAGTCAGGAAACTTGCAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp AGCAATATTGAACGTCTTCTGCATGTCTGGCCACTGTaGCTACATAAAAGACTAAGGACTTCTCCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: SNIERLLHVWPL*LHKRLRTSPKQ
Trigger: TTGCTTTGGAGAAGTCCTTAGTCTTTTATGTAGCCACAGTGGCCAGACATGCAGAAGACGTTCAATATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS CAA 90 bp TTTCAGATTCTCCCTGCTTGGACTGGTTTAAAGCACCCCAGTTGTTaGTTGCAAGAACAGCTGGTAGAAATATATTTGCCAACATATCCC +
Preference number: 6 (lower is better)
Translates to: FQILPAWTGLKHPSC*LQEQLVEIYLPTYP
Trigger: GGGATATGTTGGCAAATATATTTCTACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp AAACTATCCTCCATCAAAGTGATAATTTCTCCCGATTCGGTTCCTTaGAGCAGGAGCTCTCCTTTTCCCTTAAATGCTGCAAAACTCAGA +
Preference number: 6 (lower is better)
Translates to: KLSSIKVIISPDSVP*SRSSPFPLNAAKLR
Trigger: TCTGAGTTTTGCAGCATTTAAGGGAAAAGGAGAGCTCCTGCTCAAAGGAACCGAATCGGGAGAAATTATCACTTTGATGGAGGATAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp TTGATTAATTCCAGCAAATGTTCTTTTCAAACCTGCGCGTACACCTaGGGGTGGCTCATTAGTGAATTTGAGAGAGGTCTGAAGCAATGT +
Preference number: 6 (lower is better)
Translates to: LINSSKCSFQTCAYT*GWLISEFERGLKQC
Trigger: ACATTGCTTCAGACCTCTCTCAAATTCACTAATGAGCCACCCCAAGGTGTACGCGCAGGTTTGAAAAGAACATTTGCTGGAATTAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS TCA 72 bp GACTCAAGTAGATTGCTTTTAAACTTTGGCTGCACTTaGACTAGGTCCTCTTGTACTGAAACAGCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: DSSRLLLNFGCT*TRSSCTETALL
Trigger: GAGCAAAGCTGTTTCAGTACAAGAGGACCTAGTTCAAGTGCAGCCAAAGTTTAAAAGCAATCTACTTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp AAACTCAGATTTTGGTTGGTCCAATTCTCAATCACCTaGGTCAGCTTGGCTTCGATATCCTTCTCCTTAATG +
Preference number: 6 (lower is better)
Translates to: KLRFWLVQFSIT*VSLASISFSLM
Trigger: CATTAAGGAGAAGGATATCGAAGCCAAGCTGACTCAGGTGATTGAGAATTGGACCAACCAAAATCTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp CCTTTGAAAATCCTTCCTAGGCCTCTGAAATCCATTTaGTCTGAGCAATTGAACACGACCACATATTTTCCC +
Preference number: 6 (lower is better)
Translates to: PLKILPRPLKSI*SEQLNTTTYFP
Trigger: GGGAAAATATGTGGTCGTGTTCAATTGCTCAGATCAAATGGATTTCAGAGGCCTAGGAAGGATTTTCAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp GAATATTTGATAGCCAGCAATAAAAGAGGCCAATCTTaGAAGACTTTGTTTTCCGGAACCACCAACACCCAC +
Preference number: 6 (lower is better)
Translates to: EYLIASNKRGQS*KTLFSGTTNTH
Trigger: GTGGGTGTTGGTGGTTCCGGAAAACAAAGTCTTTCAAGATTGGCCTCTTTTATTGCTGGCTATCAAATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp GTTAATCAAACCCTCTATCTGAACCTGATGGGCTACTaGGTTTTGCAGTTCTGCATAAGTATTACTATCCAG +
Preference number: 6 (lower is better)
Translates to: VNQTLYLNLMGY*VLQFCISITIQ
Trigger: CTGGATAGTAATACTTATGCAGAACTGCAAAACGCAGTAGCCCATCAGGTTCAGATAGAGGGTTTGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp TTAGGTATTTCTGGTAAGTCCAACTTGCTTTCATGCTaGCGTAAGAAGGCTTCAAGCTTTTCTCTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: LGISGKSNLLSC*RKKASSFSLLS
Trigger: AGAAAGCAGAGAAAAGCTTGAAGCCTTCTTACGGCAGCATGAAAGCAAGTTGGACTTACCAGAAATACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp CCAAAGACTTCAGGGTTATCTAGGGATGGCAGTGACTaGATGTATTCAAAATACTGGTCTAAGGTTTTGCAT +
Preference number: 6 (lower is better)
Translates to: PKTSGLSRDGSD*MYSKYWSKVLH
Trigger: ATGCAAAACCTTAGACCAGTATTTTGAATACATCCAGTCACTGCCATCCCTAGATAACCCTGAAGTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 72 bp GATTCTCCCTGCTTGGACTGGTTTAAAGCACCCCAGTaGTTTGTTGCAAGAACAGCTGGTAGAAATATATTT +
Preference number: 6 (lower is better)
Translates to: DSPCLDWFKAPQ*FVARTAGRNIF
Trigger: AAATATATTTCTACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAACCAGTCCAAGCAGGGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp CTCTCCTTTTCCCTTAAATGCTGCAAAACTCAGATTTaGGTTGGTCCAATTCTCAATCACCTGAGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LSFSLKCCKTQI*VGPILNHLSQL
Trigger: AAGCTGACTCAGGTGATTGAGAATTGGACCAACCAAAATCTGAGTTTTGCAGCATTTAAGGGAAAAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp TTGTATTCTTCATTCAGATATCGACAGAGTAACATCTTCCATGCCTaGGCCTCGATGGATAAGGCCAATTTCATCGGCTCTGTATGTAAT +
Preference number: 6 (lower is better)
Translates to: LYSSFRYRQSNIFHA*ASMDKANFIGSVCN
Trigger: ATTACATACAGAGCCGATGAAATTGGCCTTATCCATCGAGGCCAAGGCATGGAAGATGTTACTCTGTCGATATCTGAATGAAGAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp ATATTTTGGGTACTTCAAACACAGAGTCTTCAGGTTCATCACCAGTaGGTTCTGGCATCTCACGAAGAAAATCCACAAAGTATGGTTCAG +
Preference number: 6 (lower is better)
Translates to: IFWVLQTQSLQVHHQ*VLASHEENPQSMVQ
Trigger: CTGAACCATACTTTGTGGATTTTCTTCGTGAGATGCCAGAACCAACTGGTGATGAACCTGAAGACTCTGTGTTTGAAGTACCCAAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp CATTTCTGTAACCCTATCCCAAATGCATTAGTTCATTCAGCAATATaGAACGTCTTCTGCATGTCTGGCCACTGTGGCTACATAAAAGAC +
Preference number: 6 (lower is better)
Translates to: HFCNPIPNALVHSAI*NVFCMSGHCGYIKD
Trigger: GTCTTTTATGTAGCCACAGTGGCCAGACATGCAGAAGACGTTCAATATTGCTGAATGAACTAATGCATTTGGGATAGGGTTACAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS CAA 90 bp TGTTTTTCAGATTCTCCCTGCTTGGACTGGTTTAAAGCACCCCAGTaGTTTGTTGCAAGAACAGCTGGTAGAAATATATTTGCCAACATA +
Preference number: 6 (lower is better)
Translates to: CFSDSPCLDWFKAPQ*FVARTAGRNIFANI
Trigger: TATGTTGGCAAATATATTTCTACCAGCTGTTCTTGCAACAAACAACTGGGGTGCTTTAAACCAGTCCAAGCAGGGAGAATCTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp TCTACTTTGGTAGCACCACTTTCAGGCAGAGAAATCAACACAGTTTaGGCTATCTCCTTCAGAACTGTATCAATATGCATTTCACACAAG +
Preference number: 6 (lower is better)
Translates to: STLVAPLSGREINTV*AISFRTVSICISHK
Trigger: CTTGTGTGAAATGCATATTGATACAGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTTCTCTGCCTGAAAGTGGTGCTACCAAAGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp TCCAGGGTTAACTGGATCATACGGTTAATGGCTTGTTaGATGTCATCCAAACTAGGAATCATCACCACATTA +
Preference number: 6 (lower is better)
Translates to: SRVNWIIRLMAC*MSSKLGIITTL
Trigger: TAATGTGGTGATGATTCCTAGTTTGGATGACATTCAACAAGCCATTAACCGTATGATCCAGTTAACCCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp TCTTTTAATTTCACTAGAGCAGACAATATTATAGTCTaGAAGGAAGTAGGAGGCCACAGCAATCAGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SFNFTRADNIIV*KEVGGHSNQSL
Trigger: GAGGCTCTGATTGCTGTGGCCTCCTACTTCCTTTCAGACTATAATATTGTCTGCTCTAGTGAAATTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp CCCCCACTCACCAATAGTTGGAGGATCCACCAACATTaGAATAAGATTCAGGTTTTCTGTGAAAGGAATTTT +
Preference number: 6 (lower is better)
Translates to: PPLTNSWRIHQH*NKIQVFCERNF
Trigger: AAAATTCCTTTCACAGAAAACCTGAATCTTATTTCAATGTTGGTGGATCCTCCAACTATTGGTGAGTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp CTGCTCATTACGGTGTCATACAATCCATACAGCTTCTaGAGCAAGTTGAGTTCTTTTCTGGTTTTGTGTAAA +
Preference number: 6 (lower is better)
Translates to: LLITVSYNPYSF*SKLSSFLVLCK
Trigger: TTTACACAAAACCAGAAAAGAACTCAACTTGCTGCAGAAGCTGTATGGATTGTATGACACCGTAATGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp ATGAAGTATTCATACAAATTATCAAAGGTAGGAGGATaGCGAGGTAGCTCCCTCTTCATCACTGAAATCAGA +
Preference number: 6 (lower is better)
Translates to: MKYSYKLSKVGG*RGSSLFITEIR
Trigger: TCTGATTTCAGTGATGAAGAGGGAGCTACCTCGCCATCCTCCTACCTTTGATAATTTGTATGAATACTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp ATTAGTGAATTTGAGAGAGGTCTGAAGCAATGTAATTaGAAATCGATCATGGGGCTCCGTAGTTATCCATAC +
Preference number: 6 (lower is better)
Translates to: ISEFERGLKQCN*KSIMGLRSYPY
Trigger: GTATGGATAACTACGGAGCCCCATGATCGATTTCCAATTACATTGCTTCAGACCTCTCTCAAATTCACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000359357.7
CDS CAA 72 bp CAAGTTCAGCCACATAGTACTGAAGAATACGCTCTATaGTGTGGTTTATTTCTAATCCCAGACAGGGAATGT +
Preference number: 6 (lower is better)
Translates to: QVQPHSTEEYAL*CGLFLIPDREC
Trigger: ACATTCCCTGTCTGGGATTAGAAATAAACCACACAATAGAGCGTATTCTTCAGTACTATGTGGCTGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp GTAGCACCACTTTCAGGCAGAGAAATCAACACAGTTTaGGCTATCTCCTTCAGAACTGTATCAATATGCATT +
Preference number: 6 (lower is better)
Translates to: VAPLSGREINTV*AISFRTVSICI
Trigger: AATGCATATTGATACAGTTCTGAAGGAGATAGCCAAAACTGTGTTGATTTCTCTGCCTGAAAGTGGTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp ATCAGTCACAGGCAATCCAAAAAGTTGTTCACCAGATaGATACGTAACAAATTTCCTCCACAGATCATCGAA +
Preference number: 6 (lower is better)
Translates to: ISHRQSKKLFTR*IRNKFPPQIIE
Trigger: TTCGATGATCTGTGGAGGAAATTTGTTACGTATTCATCTGGTGAACAACTTTTTGGATTGCCTGTGACTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp AAGGTTCTGTACTACGAGCCACTCTTCAATTATATCTaGGGAAGTGGACAATTTATACACCCAATTCTGGAT +
Preference number: 6 (lower is better)
Translates to: KVLYYEPLFNYI*GSGQFIHPILD
Trigger: ATCCAGAATTGGGTGTATAAATTGTCCACTTCCTCAGATATAATTGAAGAGTGGCTCGTAGTACAGAACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp TCTCCAACACAGCAATTAATCACATTGGGATTCTCATaGGCTCGCTGCATTATTTTTATCCAAGACTTGTCA +
Preference number: 6 (lower is better)
Translates to: SPTQQLITLGFS*ARCIIFIQDLS
Trigger: TGACAAGTCTTGGATAAAAATAATGCAGCGAGCTCATGAGAATCCCAATGTGATTAATTGCTGTGTTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp GTCTATATACAATTTCATCATTTTTGCCCCTTTAGTTaGTCCAGCAATAGTTCGACCACATTCAATACCAGG +
Preference number: 6 (lower is better)
Translates to: VYIQFHHFCPFS*SSNSSTTFNTR
Trigger: CCTGGTATTGAATGTGGTCGAACTATTGCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTGTATATAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327475.11
ENST00000449981.6
CDS GCA 72 bp TCTTCAACTGCACGAGTAAGATGTGCATTAAACCACTaGTCATCTTCAGGAGTTATAAATCTGTCTGCAATT +
Preference number: 6 (lower is better)
Translates to: SSTARVRCALNH*SSSGVINLSAI
Trigger: AATTGCAGACAGATTTATAACTCCTGAAGATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp ACAGTCCATGATTCTCATAATAAGATGTGGTGGTTTTaGAAGTTTCCTGACTGTGGCAATATCATTTGGCTT +
Preference number: 6 (lower is better)
Translates to: TVHDSHNKMWWF*KFPDCGNIIWL
Trigger: AAGCCAAATGATATTGCCACAGTCAGGAAACTTGCAAAACCACCACATCTTATTATGAGAATCATGGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp GTCTATATACAATTTCATCATTTTTGCCCCTTTAGTTaGTCCAGCAATAGTTCGACCACATTAGATGGGCAA +
Preference number: 6 (lower is better)
Translates to: VYIQFHHFCPFS*SSNSSTTLDGQ
Trigger: TTGCCCATCTAATGTGGTCGAACTATTGCTGGAGCAACTAAAGGGGCAAAAATGATGAAATTGTATATAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359357.7
CDS CCA 72 bp CAGAACACAGTCCATGATTCTCATAATAAGATGTGGTaGTTTTGCAAGTTTCCTGACTGTGGCAATATCATT +
Preference number: 6 (lower is better)
Translates to: QNTVHDSHNKMW*FCKFPDCGNII
Trigger: AATGATATTGCCACAGTCAGGAAACTTGCAAAACCACCACATCTTATTATGAGAATCATGGACTGTGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp TTTCCAGGAGAACTGGATCAGATACAAAGAAGAATCTaGGAAACAGTAATCGTTTCTTCTCCAAATACCCTG +
Preference number: 6 (lower is better)
Translates to: FPGELDQIQRRI*ETVIVSSPNTL
Trigger: CAGGGTATTTGGAGAAGAAACGATTACTGTTTCCAAGATTCTTCTTTGTATCTGATCCAGTTCTCCTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp GCAAATCCATTTTCTCATTCATTGCTGCATCAAATTTaGCCTGTACTTTATCCAGCTCAGCTTGCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: ANPFSHSLLHQI*PVLYPAQLASH
Trigger: ATGAGAAGCAAGCTGAGCTGGATAAAGTACAGGCAAAATTTGATGCAGCAATGAATGAGAAAATGGATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp CTCATTACGAGATATCTGGTTCATAATTTCTGCAAATaGTGGAAGTTTACTCAGCTCCACAAGATTCAGCCA +
Preference number: 6 (lower is better)
Translates to: LITRYLVHNFCK*WKFTQLHKIQP
Trigger: TGGCTGAATCTTGTGGAGCTGAGTAAACTTCCACAATTTGCAGAAATTATGAACCAGATATCTCGTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp TTCATTTTTATCATACACTTAGTTTCCCGAACAACTTCCAAAATTTaGGGATCGAAATTAACCAGCAACTTCCCTGTTTCTGGATGTCGC +
Preference number: 6 (lower is better)
Translates to: FIFIIHLVSRTTSKI*GSKLTSNFPVSGCR
Trigger: GCGACATCCAGAAACAGGGAAGTTGCTGGTTAATTTCGATCCCAAAATTTTGGAAGTTGTTCGGGAAACTAAGTGTATGATAAAAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp CCCACTGAGACTAAATTCACAATCATCTCACATATTTaGGGCTTGAAACTTCTACAAGGATCAAAGTATCCA +
Preference number: 6 (lower is better)
Translates to: PTETKFTIISHI*GLKLLQGSKYP
Trigger: TGGATACTTTGATCCTTGTAGAAGTTTCAAGCCTCAAATATGTGAGATGATTGTGAATTTAGTCTCAGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS TCA 72 bp AGCAAAATGCACAATCAAATTGGTGTGACAGACTATTaGATACAACACAAGATGGTCAATGTCAATGACAGG +
Preference number: 6 (lower is better)
Translates to: SKMHNQIGVTDY*IQHKMVNVNDR
Trigger: CCTGTCATTGACATTGACCATCTTGTGTTGTATTCAATAGTCTGTCACACCAATTTGATTGTGCATTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373278.8
CDS GCA 72 bp AGAGCCAATATTTTCTTCAACTGCACGAGTAAGATGTaGATTAAACCACTGCTCATCTTCAGGAGTTATAAA +
Preference number: 6 (lower is better)
Translates to: RANIFFNCTSKM*IKPLLIFRSYK
Trigger: TTTATAACTCCTGAAGATGAGCAGTGGTTTAATGCACATCTTACTCGTGCAGTTGAAGAAAATATTGGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp ATCTTTAAGGTCATGAGGAGTACAAACAGGAATTTGTaGTTTTCGTATAGGCCTCTGACAGAGTATGTAAAA +
Preference number: 6 (lower is better)
Translates to: IFKVMRSTNRNL*FSYRPLTEYVK
Trigger: TTTTACATACTCTGTCAGAGGCCTATACGAAAACCACAAATTCCTGTTTGTACTCCTCATGACCTTAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CCA 72 bp ATTACGAGATATCTGGTTCATAATTTCTGCAAATTGTaGAAGTTTACTCAGCTCCACAAGATTCAGCCAAGT +
Preference number: 6 (lower is better)
Translates to: ITRYLVHNFCKL*KFTQLHKIQPS
Trigger: ACTTGGCTGAATCTTGTGGAGCTGAGTAAACTTCCACAATTTGCAGAAATTATGAACCAGATATCTCGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 72 bp ATCATACACTTAGTTTCCCGAACAACTTCCAAAATTTaGGGATCGAAATTAACCAGCAACTTCCCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: IIHLVSRTTSKI*GSKLTSNFPVS
Trigger: AGAAACAGGGAAGTTGCTGGTTAATTTCGATCCCAAAATTTTGGAAGTTGTTCGGGAAACTAAGTGTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS CAA 90 bp CAACATTTGGAACCAAAATTGATGAATATTCCGGAATACTGTCAGTaGGATAATAATAAGGCTGAAGTTTCTTATTCCAGTGCTCCCAAT +
Preference number: 6 (lower is better)
Translates to: QHLEPKLMNIPEYCQ*DNNKAEVSYSSAPN
Trigger: ATTGGGAGCACTGGAATAAGAAACTTCAGCCTTATTATTATCCAACTGACAGTATTCCGGAATATTCATCAATTTTGGTTCCAAATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp AATATTGATATAAGTTCTCTGACAGCTTCTTCCACATaGTTACTTTTGTGGTTTAGAATGTCAGCCCATTCT +
Preference number: 6 (lower is better)
Translates to: NIDISSLTASST*LLLWFRMSAHS
Trigger: AGAATGGGCTGACATTCTAAACCACAAAAGTAAGCATGTGGAAGAAGCTGTCAGAGAACTTATATCAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6
CDS GCA 72 bp ACAGTTTTGGCTATCTCCTTCAGAACTGTATCAATATaGATTTCACACAAGTCACTGATCTTCTTTAAAAGT +
Preference number: 6 (lower is better)
Translates to: TVLAISFRTVSI*ISHKSLIFFKS
Trigger: ACTTTTAAAGAAGATCAGTGACTTGTGTGAAATGCATATTGATACAGTTCTGAAGGAGATAGCCAAAACTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327475.11
ENST00000359357.7
ENST00000449981.6