RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMRT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173253

Ensembl transcript IDs: ENST00000259622.10, ENST00000302441.7, ENST00000358146.7, ENST00000382251.7, ENST00000382255.7, ENST00000412350.6, ENST00000634526.1, ENST00000635183.1

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTCTGGGACAGCCTGATGACCCTGAAG +
Preference number: 1 (lower is better)
Translates to: CQGVRVNNGREIPSG*GERGPLWDSLMTLK
Trigger: CTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 90 bp AATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTGGAT +
Preference number: 1 (lower is better)
Translates to: NGREIPSGWGERGPL*DSLMTLKVTSRGLD
Trigger: ATCCAGACCACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 90 bp TCGTTAAGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTG +
Preference number: 1 (lower is better)
Translates to: SLRHALELPGSPCQQ*ERNSVGVGRTRTSL
Trigger: CAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 90 bp TCGTTAAGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACTTCTCGT +
Preference number: 1 (lower is better)
Translates to: SLRHALELPGSPCQQ*ERNSVGVGRTRTSR
Trigger: ACGAGAAGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
3UTR GCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGACTCGTGCTCCCTTCAAGTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: QHQGTFQFRWHHVLL*TESILDSCSLQVPA
Trigger: AGCTGGGACTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR TCA 90 bp GGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGT +
Preference number: 1 (lower is better)
Translates to: GCLVFSLLIFVKTCP*AARESVSTMGEKFR
Trigger: ACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR GCA 90 bp GGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACA +
Preference number: 1 (lower is better)
Translates to: GCRHFCRNCSQVQAP*GWAETEQQLEKFPT
Trigger: TGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 90 bp GGGGAGGTAGAGGGAAGGTCCCTCCTACATAAGTCTCCGCTGGAATaGGGCGATAGCCTACAAGAAGCAAAGATTGCACATGAAAGAGAT +
Preference number: 1 (lower is better)
Translates to: GEVEGRSLLHKSPLE*GDSLQEAKIAHERD
Trigger: ATCTCTTTCATGTGCAATCTTTGCTTCTTGTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCTTCCCTCTACCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 90 bp AGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCC +
Preference number: 1 (lower is better)
Translates to: RHFCRNCSQVQAPCG*AETEQQLEKFPTSP
Trigger: GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 90 bp CTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATaGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTG +
Preference number: 1 (lower is better)
Translates to: LSVFLRGLFKGLFDK*CFQLRTRFVSKCLL
Trigger: CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 90 bp ACTGCAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTGCTTGTTGTaGTTGTTATGGATTTGTTTGCTTGCTTGCTTCAACAGACATACT +
Preference number: 1 (lower is better)
Translates to: TATSSCCCSCSCCLL*LLWICLLACFNRHT
Trigger: AGTATGTCTGTTGAAGCAAGCAAGCAAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 90 bp TTTTATACAGATGCAAAAGTACAGATTAGGTTTGAAAGAGTTTCCTaGGAGGGTGAAAGATATCCATACTGCAACTTCTTCTTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: FYTDAKVQIRFERVS*EGERYPYCNFFLLL
Trigger: CAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCAGGAAACTCTTTCAAACCTAATCTGTACTTTTGCATCTGTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR TCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGTGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTG +
Preference number: 2 (lower is better)
Translates to: LELPGSPCQQWERNSVGVCPALH*VHPGLV
Trigger: CACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACA...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGAAGTCCTTGCTTGGTaGTTCCACTGGGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LELPGSPCQQWERNSVGVEVLAW*FHWAGA
Trigger: AGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTC...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGACAGAAGTCCTTGCTTaGTGGTTCCACTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTTEVLA*WFHWAG
Trigger: CCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp GTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTGGAAGTCTCCGCTGGAATaGGGCGATAGCCTAGAGCTG +
Preference number: 2 (lower is better)
Translates to: VNNGREIPSGWGERGPLWKSPLE*GDSLEL
Trigger: CAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTT...CCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382255.7
3UTR-3UTR GCA 90 bp ACGCGGACCTCTCTGGGACAGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 2 (lower is better)
Translates to: TRTSLGQPDDPEGHFSWSHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...AGACCACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR TCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 2 (lower is better)
Translates to: EAAPGNLPISMASCPALHPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp GTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTGGACCTTCCAATTTCGATaGCATCATGTCCTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: VNNGREIPSGWGERGPLWTFQFR*HHVLLC
Trigger: GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGT...CCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCAAGTCTCCGCTGGAATaGGGCGATAGCCTAGAGCTG +
Preference number: 2 (lower is better)
Translates to: RHALELPGSPCQQWERNSKSPLE*GDSLEL
Trigger: CAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTT...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: EAAPGNLPISMASCPALHTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CAA 90 bp GTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTCCCTTTCTTTATATTCTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VRSRHHAVGQKQSSS*RSFQHLPFFIFSLQ
Trigger: CTGGAGAGAGAATATAAAGAAAGGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR TCA 90 bp GACTGCAGAAAATCCAGCTTTCTGTTTAAGCAGCCTTTCACTGAGAGACACGAGCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 2 (lower is better)
Translates to: DCRKSSFLFKQPFTERHEPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...CTCGTGTCTCTCAGTGAAAGGCTGCTTAAACAGAAAGCTGGATTTTCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 2 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 2 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CCA 90 bp AAAGGCCTCTTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGACAGAAGTCCTTGCTTaGTGGTTCCACTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KGLFDKWCFQLRTRFVSKTEVLA*WFHWAG
Trigger: CCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT...CTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp CGAGTGATGGCAGATGAAGGCCTCTTAAGAATAGACTCAACAGAAAATGACAGTGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: RVMADEGLLRIDSTENDSALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...ACTGTCATTTTCTGTTGAGTCTATTCTTAAGAGGCCTTCATCTGCCATCACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR GCA 90 bp TGGAATGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCAATTACAGAAGTCCTTaGTTGGTGGTTCCACTGGGC +
Preference number: 2 (lower is better)
Translates to: WNGLCLSGRGCLVFSLLINYRSP*LVVPLG
Trigger: GCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT...GATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR GCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGTCCATCCTGGACTCGTaGTCCCTTCAAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLSILDS*SLQVPA
Trigger: AGCTGGGACTTGAAGGGAGCACGAGTCCAGGATGGA...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CCA 90 bp AAGAAATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: KKLVPYSQTLNTAWLNQGQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...GCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAATTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR TCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAGTTTCCTGGGAGGGTaGAAGATATCCATACTGCAA +
Preference number: 2 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYSFLGG*KISILQ
Trigger: TTGCAGTATGGATATCTTTCACCCTCCCAGGAAACT...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR GCA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 2 (lower is better)
Translates to: LLRIDSTENDSGSFTESFDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR TCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 2 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CAA 90 bp ACTAAACACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGT +
Preference number: 2 (lower is better)
Translates to: TKHSLCFLGVSSKAS*TNGVFNSGPDLSVS
Trigger: ACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR TCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 2 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR TCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGTGGTGTTTTCTTTGCTaGTCTTCGTTAAGACATGCC +
Preference number: 2 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLWCFLC*SSLRHA
Trigger: GGCATGTCTTAACGAAGATCAGCAAAGAAAACACCA...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR GCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATCCAGACCCTGAATACTaGATGGTTAAATCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNPDPEY*MVKSRQ
Trigger: CTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGG...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CAA 90 bp GTTTCCTGGGAGGGTGAAAGATATCCATACTGCAACTTCTTCTTGTaGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTTATGGATTTG +
Preference number: 2 (lower is better)
Translates to: VSWEGERYPYCNFFL*LFLFLLLVVVVMDL
Trigger: CAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCAGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp AGAGTTTCCTGGGAGGGTGAAAGATATCCATACTGCAACTTCTTCTaGTTGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTTATGGAT +
Preference number: 2 (lower is better)
Translates to: RVSWEGERYPYCNFF*LLFLFLLLVVVVMD
Trigger: ATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCAGGAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp ATAAGTCTCCGCTGGAATGGGGCGATAGCCTACAAGAAGCAAAGATaGCACATGAAAGAGATTAACATCTACGGAATAAAAATGTGGAAA +
Preference number: 2 (lower is better)
Translates to: ISLRWNGAIAYKKQR*HMKEINIYGIKMWK
Trigger: TTTCCACATTTTTATTCCGTAGATGTTAATCTCTTTCATGTGCAATCTTTGCTTCTTGTAGGCTATCGCCCCATTCCAGCGGAGACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp GAGGGTGAAAGATATCCATACTGCAACTTCTTCTTGTTGTTGTTCTaGTTCTTGTTGCTTGTTGTGGTTGTTATGGATTTGTTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: EGERYPYCNFFLLLF*FLLLVVVVMDLFAC
Trigger: GCAAGCAAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp TCCTGGGAGGGTGAAAGATATCCATACTGCAACTTCTTCTTGTTGTaGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTTATGGATTTGTTT +
Preference number: 2 (lower is better)
Translates to: SWEGERYPYCNFFLL*FLFLLLVVVVMDLF
Trigger: AAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp GCAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTaGTTATGGATTTGTTTGCTTGCTTGCTTCAACAGACATACTTTA +
Preference number: 2 (lower is better)
Translates to: ATSSCCCSCSCCLLW*LWICLLACFNRHTL
Trigger: TAAAGTATGTCTGTTGAAGCAAGCAAGCAAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 90 bp GAAAGATATCCATACTGCAACTTCTTCTTGTTGTTGTTCTTGTTCTaGTTGCTTGTTGTGGTTGTTATGGATTTGTTTGCTTGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: ERYPYCNFFLLLFLF*LLVVVVMDLFACLL
Trigger: AAGCAAGCAAGCAAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR GCA 90 bp AAAGATATCCATACTGCAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTGCTTGATGGATTTGTTTGCTTaGTTGCTTCAACAGACATAC +
Preference number: 2 (lower is better)
Translates to: KDIHTATSSCCCSCSCCLMDLFA*LLQQTY
Trigger: GTATGTCTGTTGAAGCAAGCAAGCAAACAAATCCAT...CAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR GCA 90 bp AAAGATATCCATACTGCAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTGCTTGTGTTATGGATTTGTTTaGTTGCTTGCTTCAACAGAC +
Preference number: 2 (lower is better)
Translates to: KDIHTATSSCCCSCSCCLCYGFV*LLASTD
Trigger: GTCTGTTGAAGCAAGCAAGCAAACAAATCCATAACA...CAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 72 bp CATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGG +
Preference number: 3 (lower is better)
Translates to: HALELPGSPCQQ*ERNSVGVGRTR
Trigger: CCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 72 bp GAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTGAAGGTCACTTCTCGT +
Preference number: 3 (lower is better)
Translates to: EIPSGWGERGPL*DSLMTLKVTSR
Trigger: ACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 72 bp GTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTCTGGGACAGCCTGATG +
Preference number: 3 (lower is better)
Translates to: VRVNNGREIPSG*GERGPLWDSLM
Trigger: CATCAGGCTGTCCCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CCA 72 bp AGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTaGCATTTAGCAGGCATTGCTGGTAGAGGAGGGTGT +
Preference number: 3 (lower is better)
Translates to: SWPQASGLELRW*HLAGIAGRGGC
Trigger: ACACCCTCCTCTACCAGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 72 bp GTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTaGGGAGAACGCGGACTTCTCGTGGTCTGGATCTCA +
Preference number: 3 (lower is better)
Translates to: VRVNNGREIPSG*GERGLLVVWIS
Trigger: TGAGATCCAGACCACGAGAAGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
3UTR GCA 72 bp ACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTaGTCTGCACTGAGTCCATCCTGGACTCGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: TREPSNFDGIMS*SALSPSWTRAP
Trigger: GGGAGCACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR TCA 72 bp CTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTGCTCCCTTCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: LPISMASCPALH*VHPGLVLPSSP
Trigger: GGGACTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR GCA 72 bp GGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGACTCGTGCTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: GTFQFRWHHVLL*TESILDSCSLQ
Trigger: TTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR GCA 72 bp CACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAG +
Preference number: 3 (lower is better)
Translates to: HFCRNCSQVQAP*GWAETEQQLEK
Trigger: CTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 72 bp GAGGGAAGGTCCCTCCTACATAAGTCTCCGCTGGAATaGGGCGATAGCCTACAAGAAGCAAAGATTGCACAT +
Preference number: 3 (lower is better)
Translates to: EGRSLLHKSPLE*GDSLQEAKIAH
Trigger: ATGTGCAATCTTTGCTTCTTGTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 72 bp TGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCA +
Preference number: 3 (lower is better)
Translates to: CRNCSQVQAPCG*AETEQQLEKFP
Trigger: TGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CAA 90 bp GTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTGGTTCTTGTTGTTGTTCTaGTTCTTGTTGCTTGTTGTG +
Preference number: 3 (lower is better)
Translates to: VNNGREIPSGWGERGPLWFLLLF*FLLLVV
Trigger: CACAACAAGCAACAAGAACAAGAACAACAACAAGAA...CCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR TCA 72 bp GTGTTTTCTTTGCTGATCTTCGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAG +
Preference number: 3 (lower is better)
Translates to: VFSLLIFVKTCP*AARESVSTMGE
Trigger: CTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAACGAAGATCAGCAAAGAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CCA 72 bp AATTACAGAAGTCCTTGCTTGGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAG +
Preference number: 3 (lower is better)
Translates to: NYRSPCLVVPLG*GCRHFCRNCSQ
Trigger: CTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CAA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTTGTTCTTGTTCTTGTaGCTTGTTGTGGTTGTTATG +
Preference number: 3 (lower is better)
Translates to: EAAPGNLPISMASCPALHLFLFL*LVVVVM
Trigger: CATAACAACCACAACAAGCAACAAGAACAAGAACAA...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTAAATTACAGAAGTCCTaGCTTGGTGGTTCCACTGGG +
Preference number: 3 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRKLQKS*LGGSTG
Trigger: CCCAGTGGAACCACCAAGCAAGGACTTCTGTAATTT...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR-3UTR CAA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTAAATTACAGAAGTCCTaGCTTGGTGGTTCCACTGGG +
Preference number: 3 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVKLQKS*LGGSTG
Trigger: CCCAGTGGAACCACCAAGCAAGGACTTCTGTAATTT...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CAA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTGTGGTTGTTATGGATTaGTTTGCTTGCTTGCTTCAA +
Preference number: 3 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRVVVMD*FACLLQ
Trigger: TTGAAGCAAGCAAGCAAACAAATCCATAACAACCAC...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 72 bp TTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATaGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: FLRGLFKGLFDK*CFQLRTRFVSK
Trigger: CTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR-3UTR CAA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGAAGTACAGATTAGGTTaGAAAGAGTTTCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVKYRLG*KEFPGR
Trigger: CCTCCCAGGAAACTCTTTCAAACCTAATCTGTACTT...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTTACTGCAACTTCTTCTaGTTGTTGTTCTTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVYCNFF*LLFLFL
Trigger: CAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTA...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCATGTTGCTTGTTGTGGTaGTTATGGATTTGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPCCLLW*LWICLL
Trigger: AAGCAAACAAATCCATAACAACCACAACAAGCAACA...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGTTGTTGTTCTTGTTCTaGTTGCTTGTTGTGGTTGTT +
Preference number: 3 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVLLFLF*LLVVVV
Trigger: AACAACCACAACAAGCAACAAGAACAAGAACAACAA...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFNSGPD*SVSVCW
Trigger: CCAGCAAACACTTACTGACAAATCGGGTCCTGAGTT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR GCA 72 bp GAAAGAGTTTCCTGGGAGGGTGAAAGATATCCATACTaGAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: ERVSWEGERYPY*NFFLLLFLFLL
Trigger: CAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCAGGAAACTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CCA 72 bp TGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTTATaGATTTGTTTGCTTGCTTGCTTCAACAGACATACT +
Preference number: 3 (lower is better)
Translates to: CCSCSCCLLWLL*ICLLACFNRHT
Trigger: AGTATGTCTGTTGAAGCAAGCAAGCAAACAAATCCATAACAACCACAACAAGCAACAAGAACAAGAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTTATGGATTTGTTTGCTaGCTTGCTTCAACAGACATA +
Preference number: 3 (lower is better)
Translates to: LLRIDSTENDSGSFTESFYGFVC*LASTDI
Trigger: TATGTCTGTTGAAGCAAGCAAGCAAACAAATCCATA...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR-3UTR CAA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTTCTTGTTCTTGTTGCTaGTTGTGGTTGTTATGGATT +
Preference number: 3 (lower is better)
Translates to: LLRIDSTENDSGSFTESFSCSCC*LWLLWI
Trigger: AATCCATAACAACCACAACAAGCAACAAGAACAAGA...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR GCA 90 bp TGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGGCTCTCGGGGACCGGTaGCGGCGGGTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CSQVQAPCGWAETEQQLEALGDR*RRVRPE
Trigger: CTCAGGCCTCACCCGCCGGCACCGGTCCCCGAGAGC...CTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCCCTGGCTCAGATCGCTaGCTCACCCGGCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSPGSDR*LTRRAR
Trigger: GCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGG...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCCCTGCGGGTCGGCCATaGCGCTCGGGGCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSPAGRP*RSGLRW
Trigger: CCAGCGAAGCCCCGAGCGCCATGGCCGACCCGCAGG...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGCGCGCACTTGGGCGTaGGGCTCAGCTTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LELPGSPCQQWERNSVGVARTWA*GSACAA
Trigger: AGCCGCGCAAGCTGAGCCGCACGCCCAAGTGCGCGC...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp ACGCGGACCTCTCTGGGACAGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTGCGGGCGCGCGCAGTTaGATTCAGCGCAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: TRTSLGQPDDPEGHFSWSAGARS*IQRSAT
Trigger: AGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGC...AGACCACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGCAGCGCGCGCACTTaGGCGTGCGGCTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LELPGSPCQQWERNSVGVGSART*ACGSAC
Trigger: GCAAGCTGAGCCGCACGCCCAAGTGCGCGCGCTGCC...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGCGGGCCGCCCCCGCCTaGCTCAGATCGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMRAAPA*LRSLAH
Trigger: GTGAGCCAGCGATCTGAGCCAGGCGGGGGCGGCCCG...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACCCTGCGGGTCGGCCATaGCGCTCGGGGCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAPGNLPISMASCPALHPAGRP*RSGLRW
Trigger: CCAGCGAAGCCCCGAGCGCCATGGCCGACCCGCAGG...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGGCTCTCGGGGACCGGTaGCGGCGGGTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEALGDR*RRVRPE
Trigger: CTCAGGCCTCACCCGCCGGCACCGGTCCCCGAGAGC...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp ACAGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGCTCTCGGGGACCGGTaGCGGCGGGTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TEVLAWWFHWAGAVGTFVALGDR*RRVRPE
Trigger: CTCAGGCCTCACCCGCCGGCACCGGTCCCCGAGAGC...TACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTCCTCGGTGGCCTGCTaGCTCCGGAGCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EAAPGNLPISMASCPALHSSVAC*LRSATW
Trigger: CCAGGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGA...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCTCCTCGGTGGCCTGCTaGCTCCGGAGCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCSSVAC*LRSATW
Trigger: CCAGGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGA...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACGGCAGCGCGCGCACTTaGGCGTGCGGCTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EAAPGNLPISMASCPALHGSART*ACGSAC
Trigger: GCAAGCTGAGCCGCACGCCCAAGTGCGCGCGCTGCC...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CTCCCTTCAAGTCCCAGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTGGAACGAACCCACTTGCTaGGGCCGCTTTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPSSPSWPQASGLELRWWNEPTC*GRFRLP
Trigger: AGGAAGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTT...CCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS-3UTR GCA 90 bp TCAGGGCTTGAACTGAGGTGGTGGCATTTAGCAGGCATTGCTGGTAGAGGAGGGTTGTCCTCGGTGGCCTaGTGCCTCCGGAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: SGLELRWWHLAGIAGRGGLSSVA*CLRSAT
Trigger: GGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGACAA...CCCTCCTCTACCAGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CTCCCTTCAAGTCCCAGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTGGGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LPSSPSWPQASGLELRWWDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...CCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGGCAGCGCGCGCACTTaGGCGTGCGGCTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RHALELPGSPCQQWERNSGSART*ACGSAC
Trigger: GCAAGCTGAGCCGCACGCCCAAGTGCGCGCGCTGCC...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCCCACCAGCAGGCAGTTaGCGCACTGGCAGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCPPAGS*RTGSRA
Trigger: GGCGCGACTGCCAGTGCGCCAACTGCCTGCTGGTGG...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TGGGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGGCGCGCGCAGTTaGATTCAGCGCAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: WAGAVGTFVGIVVRSRHHAGARS*IQRSAT
Trigger: AGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGC...ATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTCCCTTCAAGTCCCAGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTGGGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LPSSPSWPQASGLELRWWALTCL*YTALRS
Trigger: CGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGC...CCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTGGCCTTCAAGTCCCAGCTaGCCCCAGGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VNNGREIPSGWGERGPLWPSSPS*PQASGL
Trigger: AAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGG...CCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp CTCCCTTCAAGTCCCAGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTGGAAGTCTCCGCTGGAATaGGGCGATAGCCTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPSSPSWPQASGLELRWWKSPLE*GDSLEL
Trigger: CAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTT...CCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACTCAGCGCAGCGCCACTaGCTTCAGTCTGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: ARESVSTMGEKFRRGGENSAQRH*LQSADC
Trigger: GCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGA...GTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR TCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGGCAAACTGGGGGCTCTaGCTTGCCTCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTANWGL*LASGTQ
Trigger: CTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGC...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp ACGCGGACCTCTCTGGGACAGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTTGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTG +
Preference number: 4 (lower is better)
Translates to: TRTSLGQPDDPEGHFSWSCPALH*VHPGLV
Trigger: CACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACA...AGACCACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCGCTTTCGGCTTCCTCTaGCCCAGGCTGGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCAFGFL*PRLGGK
Trigger: TTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGC...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGAGGCGGTGTGAATACTaGTTGGCCGAGGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LELPGSPCQQWERNSVGVRRCEY*LAEARW
Trigger: CCAGCGTGCCTCGGCCAATCAGTATTCACACCGCCT...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR TCA 90 bp GCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGAGCTTTACGTCCTCTaGTTGGCCGGTTGTCAGGCG +
Preference number: 4 (lower is better)
Translates to: ARESVSTMGEKFRRGGENELYVL*LAGCQA
Trigger: CGCCTGACAACCGGCCAATCAGAGGACGTAAAGCTC...GTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CCA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTCCTTCTTGTCCTCGGTaGCCTGCTGCCTCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLPSCPR*PAASGA
Trigger: CGCTCCGGAGGCAGCAGGCCACCGAGGACAAGAAGG...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGCGGACCTCTCTGGGAAGTCCTTGCTTGGTaGTTCCACTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VNNGREIPSGWGERGPLWEVLAW*FHWAGA
Trigger: AGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTC...CCAGAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGGCCCTCACTCTTGCTaGGGCCGCTTTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLGPHSC*GRFRLP
Trigger: AGGAAGCCGAAAGCGGCCTCAGCAAGAGTGAGGGCC...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CCA 90 bp GGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAAAGGCAGTTGGCGCACTaGCAGTCGCGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: GTFVGIVVRSRHHAVGQKRQLAH*QSRQRQ
Trigger: CTGTCGCTGGCGCGACTGCCAGTGCGCCAACTGCCT...TTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRERGPL*DSLMTL
Trigger: CAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTC...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTCCTGGCTCAGATCGCTaGCTCACCCGGCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRPGSDR*LTRRAR
Trigger: GCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGG...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTCGGGCCGCCCCCGCCTaGCTCAGATCGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRRAAPA*LRSLAH
Trigger: GTGAGCCAGCGATCTGAGCCAGGCGGGGGCGGCCCG...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGAAGTCTCCGCTGGAATaGGGCGATAGCCTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTKSPLE*GDSLEL
Trigger: CAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTT...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCGGTGTGAATACTGATTaGCCGAGGCACGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSGVNTD*PRHAGR
Trigger: CCTGCCAGCGTGCCTCGGCCAATCAGTATTCACACC...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR TCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGACTGAGAGACACGAGTaGTGGCAGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTTERHE*WQMKAS
Trigger: AGAGGCCTTCATCTGCCATCACTCGTGTCTCTCAGT...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCQVQAP*GWAETE
Trigger: CTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTG...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTCCACTGGCTTCAGTCTaGAGACTGCGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLPLASV*RLRSPS
Trigger: GGAAGGGGAGCGCAGTCTGCAGACTGAAGCCAGTGG...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCGAAGTCCTTGCTTGGTaGTTCCACTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCEVLAW*FHWAGA
Trigger: AGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTC...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGGAAATTCCGTCGGGGTaGGGAGAACGCGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMEIPSG*GERGLL
Trigger: GAGAAGTCCGCGTTCTCCCCACCCCGACGGAATTTC...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR TCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCTGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTG +
Preference number: 4 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPCPALH*VHPGLV
Trigger: CACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACA...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPVKTCP*AARESV
Trigger: CACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAAC...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLVKTCP*AARESV
Trigger: CACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAAC...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp ACAGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTACTACACTCTTCTCTCTaGAGCGCTCCGCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: TEVLAWWFHWAGAVGTFVLHSSL*SAPPES
Trigger: GGACTCTGGCGGAGCGCTTCAGAGAGAAGAGTGTAG...TACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCTCCATCCTGGACTCGTaGTCCCTTCAAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GWGCRHFCRNCSQVQAPCSILDS*SLQVPA
Trigger: AGCTGGGACTTGAAGGGAGCACGAGTCCAGGATGGA...GCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACGACAGAAGCGCTTGTaGCCCTTCAGGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: GTFVGIVVRSRHHAVGQKRQKRL*PFRQDT
Trigger: GGTGTCCTGCCTGAAGGGCCACAAGCGCTTCTGTCG...TTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: CRHFCRNCSQVQAPCGWAAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...TGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCACCTTCAAGTCCCAGCTaGCCCCAGGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CRHFCRNCSQVQAPCGWAPSSPS*PQASGL
Trigger: AAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGG...TGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAGGCAGTTGGCGCACTaGCAGTCGCGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYRQLAH*QSRQRQ
Trigger: CTGTCGCTGGCGCGACTGCCAGTGCGCCAACTGCCT...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTACATAAGTCTCCGCTaGAATGGGGCGATAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSYISLR*NGAIAY
Trigger: GTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTA...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CCA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGACAGAAGTCCTTGCTTaGTGGTTCCACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTETEVLA*WFHWAG
Trigger: CCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: WAGAVGTFVGIVVRSRHHALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...ATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTCCCTTCAAGTCCCAGCTGGCCCCAGGCTTCAGGGCTTGAACTGAGGTGGTGGCAGAAAGACCAGTATTaGCCTCTATCAGCATCACAA +
Preference number: 4 (lower is better)
Translates to: LPSSPSWPQASGLELRWWQKDQY*PLSASQ
Trigger: TTGTGATGCTGATAGAGGCCAATACTGGTCTTTCTG...CCACCACCTCAGTTCAAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGTTTACGTCCTCTGATTaGCCGGTTGTCAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRFTSSD*PVVRRC
Trigger: ACACCGCCTGACAACCGGCCAATCAGAGGACGTAAA...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR GCA 90 bp AAAGGCCTCTTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTTGTCCTCGGTGGCCTaGTGCCTCCGGAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: KGLFDKWCFQLRTRFVSKLSSVA*CLRSAT
Trigger: GGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGACAA...CTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCAATTACAGAAGTCCTTaGTTGGTGGTTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSNYRSP*LVVPLG
Trigger: GCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGATGGCATCATGTCCTaGTCTGCACTGAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RHALELPGSPCQQWERNSDGIMS*SALSPS
Trigger: GGATGGACTCAGTGCAGAGCAGGACATGATGCCATC...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGAGGTATGACGGTGCCTaGAAGAGAGAAGTCACCATT +
Preference number: 4 (lower is better)
Translates to: LELPGSPCQQWERNSVGVRYDGA*KREVTI
Trigger: AATGGTGACTTCTCTCTTGCAGGCACCGTCATACCT...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCACCACCAGCAGGCAGTTaGCGCACTGGCAGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPPPAGS*RTGSRA
Trigger: GGCGCGACTGCCAGTGCGCCAACTGCCTGCTGGTGG...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGACAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGAGAAGTCCTTGCTTGGTaGTTCCACTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGEVLAW*FHWAGA
Trigger: AGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTC...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGCTTGAACTGAGGTGGTaGCATTTAGCAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: CSQVQAPCGWAETEQQLELELRW*HLAGIA
Trigger: AGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAG...CTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCSPCQQ*ERNSVG
Trigger: CCCGACGGAATTTCTCTCCCATTGTTGACACGGACT...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGTCCTCTGACCCAGGCTaGGCGGGAAAGGTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVSSDPG*AGKVGP
Trigger: CGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGA...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp GGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: GWGCRHFCRNCSQVQAPCNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...GCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp GGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAATCTAAACCCGAGGTATaGCGGTGCCTGCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GTFVGIVVRSRHHAVGQKSKPEV*RCLQER
Trigger: TCTCTCTTGCAGGCACCGTCATACCTCGGGTTTAGA...TTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR GCA 90 bp ATATTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTCCTCGGTGGCCTGCTaGCTCCGGAGCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: IFSLQHNVLQLFISKGSSSSVAC*LRSATW
Trigger: CCAGGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGA...AGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGACTGGGGGCTCTGACTTaGCTCTGGTACACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGLGALT*LWYTAL
Trigger: CAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAG...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGGGAGAACTTCTAAAATaGTTTTGGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTGELLK*FWPANW
Trigger: CCAGTTTGCTGGCCAAAAGCATTTTAGAAGTTCTCC...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATCCATCCTGGACTCGTaGTCCCTTCAAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGSILDS*SLQVPA
Trigger: AGCTGGGACTTGAAGGGAGCACGAGTCCAGGATGGA...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGCTAAGTGGCAGAGGGTaGCTGGTGTTTTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTELSGRG*LVFSLL
Trigger: CAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAG...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCCTAAGTGGCAGAGGGTaGCTGGTGTTTTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RHALELPGSPCQQWERNSLSGRG*LVFSLL
Trigger: CAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAG...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCAAGGCAGTTGGCGCACTaGCAGTCGCGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPRQLAH*QSRQRQ
Trigger: CTGTCGCTGGCGCGACTGCCAGTGCGCCAACTGCCT...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCACCTTCTTGTCCTCGGTaGCCTGCTGCCTCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPPSCPR*PAASGA
Trigger: CGCTCCGGAGGCAGCAGGCCACCGAGGACAAGAAGG...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LELPGSPCQQWERNSVGVTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTCCTTCAAGTCCCAGCTaGCCCCAGGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRPSSPS*PQASGL
Trigger: AAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGG...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TCAGGGCTTGAACTGAGGTGGTGGCATTTAGCAGGCATTGCTGGTAGAGGAGGGACCTTCCAATTTCGATaGCATCATGTCCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGLELRWWHLAGIAGRGGTFQFR*HHVLLC
Trigger: GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGT...CCCTCCTCTACCAGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAGCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GACTGCAGAAAATCCAGCTTTCTGTTTAAGCAGCCTTTCACTGAGAGACACGAGGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: DCRKSSFLFKQPFTERHEERGPL*DSLMTL
Trigger: CAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTC...CTCGTGTCTCTCAGTGAAAGGCTGCTTAAACAGAAAGCTGGATTTTCTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp AGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTGGATCTCAGGAGTGTGAGGTGGATTATGTCTAAGTaGCAGAGGGTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLMTLKVTSRGLDLRSVRWIMSK*QRVPGV
Trigger: AACACCAGGCACCCTCTGCCACTTAGACATAATCCA...CCTCACACTCCTGAGATCCAGACCACGAGAAGTGACCTTCAGGGTCATCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTCCTCTGACCCAGGCTaGGCGGGAAAGGTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLSSDPG*AGKVGP
Trigger: CGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGA...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTGCAAACTGGGGGCTCTaGCTTGCCTCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRANWGL*LASGTQ
Trigger: CTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGC...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCTCTCGGGGACCGGTaGCGGCGGGTGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFALGDR*RRVRPE
Trigger: CTCAGGCCTCACCCGCCGGCACCGGTCCCCGAGAGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp AAGAAATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCTTGTCCTCGGTGGCCTaGTGCCTCCGGAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: KKLVPYSQTLNTAWLNQGLSSVA*CLRSAT
Trigger: GGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGACAA...GCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAATTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYQVQAP*GWAETE
Trigger: CTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTG...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCAATTACAGAAGTCCTTaGTTGGTGGTTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RHALELPGSPCQQWERNSNYRSP*LVVPLG
Trigger: GCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGCCAGACCCTGAATACTaGATGGTTAAATCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRPDPEY*MVKSRQ
Trigger: CTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGG...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGCCAGACCCTGAATACTaGATGGTTAAATCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMPDPEY*MVKSRQ
Trigger: CTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGG...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCCTTGAACTGAGGTGGTaGCATTTAGCAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: RHALELPGSPCQQWERNSLELRW*HLAGIA
Trigger: AGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAG...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCACCTTCCAATTTCGATaGCATCATGTCCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPTFQFR*HHVLLC
Trigger: GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGT...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCTGGCTCAGATCGCTaGCTCACCCGGCGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPGSDR*LTRRAR
Trigger: GCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCGGGCCGCCCCCGCCTaGCTCAGATCGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFRAAPA*LRSLAH
Trigger: GTGAGCCAGCGATCTGAGCCAGGCGGGGGCGGCCCG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCTGCGGGTCGGCCATaGCGCTCGGGGCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPAGRP*RSGLRW
Trigger: CCAGCGAAGCCCCGAGCGCCATGGCCGACCCGCAGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp AGGTCCCTCCTACATAAGTCTCCGCTGGAATGGGGCGATAGCCTAGAGCTGATGTGGTGTTTTCTTTGCTaGTCTTCGTTAAGACATGCC +
Preference number: 4 (lower is better)
Translates to: RSLLHKSPLEWGDSLELMWCFLC*SSLRHA
Trigger: GGCATGTCTTAACGAAGATCAGCAAAGAAAACACCA...CATCAGCTCTAGGCTATCGCCCCATTCCAGCGGAGACTTATGTAGGAGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTCCTCGGTGGCCTGCTaGCTCCGGAGCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSSVAC*LRSATW
Trigger: CCAGGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTCTGGTACACAGCTTTaGGCTCGAAATTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSSGTQL*ARNYSV
Trigger: AACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGA...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACGGAGAACTTCTAAAATaGTTTTGGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: EAAPGNLPISMASCPALHGELLK*FWPANW
Trigger: CCAGTTTGCTGGCCAAAAGCATTTTAGAAGTTCTCC...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGGCAGCGCGCGCACTTaGGCGTGCGGCTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNGSART*ACGSAC
Trigger: GCAAGCTGAGCCGCACGCCCAAGTGCGCGCGCTGCC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp ATATTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTCCTTCTTGTCCTCGGTaGCCTGCTGCCTCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: IFSLQHNVLQLFISKGSSPSCPR*PAASGA
Trigger: CGCTCCGGAGGCAGCAGGCCACCGAGGACAAGAAGG...AGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AAAGGCCTCTTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCA +
Preference number: 4 (lower is better)
Translates to: KGLFDKWCFQLRTRFVSKSGADS*RPGTNP
Trigger: TGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGA...CTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS-3UTR TCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCAGCAAACTGGGGGCTCTaGCTTGCCTCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPANWGL*LASGTQ
Trigger: CTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGC...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CGAGTGATGGCAGATGAAGGCCTCTTAAGAATAGACTCAACAGAAAATGACAGTGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RVMADEGLLRIDSTENDSVKTCP*AARESV
Trigger: CACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAAC...ACTGTCATTTTCTGTTGAGTCTATTCTTAAGAGGCCTTCATCTGCCATCACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGGGTTGTCAGGCGGTGTaGATACTGATTGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWGCQAV*ILIGRG
Trigger: GCCTCGGCCAATCAGTATTCACACCGCCTGACAACC...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTGTCCTCGGTGGCCTaGTGCCTCCGGAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNLSSVA*CLRSAT
Trigger: GGTGGCGCTCCGGAGGCAGCAGGCCACCGAGGACAA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGGGAGAACTTCTAAAATaGTTTTGGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEGELLK*FWPANW
Trigger: CCAGTTTGCTGGCCAAAAGCATTTTAGAAGTTCTCC...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTGATGGCATCATGTCCTaGTCTGCACTGAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRDGIMS*SALSPS
Trigger: GGATGGACTCAGTGCAGAGCAGGACATGATGCCATC...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCGGGCGCGCGCAGTTaGATTCAGCGCAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFAGARS*IQRSAT
Trigger: AGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCCACCAGCAGGCAGTTaGCGCACTGGCAGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNPPAGS*RTGSRA
Trigger: GGCGCGACTGCCAGTGCGCCAACTGCCTGCTGGTGG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCACCAGCAGGCAGTTaGCGCACTGGCAGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPPAGS*RTGSRA
Trigger: GGCGCGACTGCCAGTGCGCCAACTGCCTGCTGGTGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTACAGAAGTCCTTGCTTaGTGGTTCCACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVTEVLA*WFHWAG
Trigger: CCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLEIPSG*GERGPL
Trigger: GAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTC...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTCCTCTGACCCAGGCTaGGCGGGAAAGGTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSSDPG*AGKVGP
Trigger: CGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CGAGTGATGGCAGATGAAGGCCTCTTAAGAATAGACTCAACAGAAAATGACAGTCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: RVMADEGLLRIDSTENDSPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...ACTGTCATTTTCTGTTGAGTCTATTCTTAAGAGGCCTTCATCTGCCATCACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGTGTTATGGATTTGTTTaGTTGCTTGCTTCAACAGAC +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRCYGFV*LLASTD
Trigger: GTCTGTTGAAGCAAGCAAGCAAACAAATCCATAACA...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAGGCAGTTGGCGCACTaGCAGTCGCGCCAGCGACAG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNRQLAH*QSRQRQ
Trigger: CTGTCGCTGGCGCGACTGCCAGTGCGCCAACTGCCT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCCTTCTTGTCCTCGGTaGCCTGCTGCCTCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNPSCPR*PAASGA
Trigger: CGCTCCGGAGGCAGCAGGCCACCGAGGACAAGAAGG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVALTCL*YTALRS
Trigger: CGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGC...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTTTGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: FSLQHNVLQLFISKGSSFEIPSG*GERGPL
Trigger: GAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTC...AAAAGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYSPCQQ*ERNSVG
Trigger: CCCGACGGAATTTCTCTCCCATTGTTGACACGGACT...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATGGTGTTTTCTTTGCTaGTCTTCGTTAAGACATGCC +
Preference number: 4 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGWCFLC*SSLRHA
Trigger: GGCATGTCTTAACGAAGATCAGCAAAGAAAACACCA...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCTTTCGGCTTCCTCTaGCCCAGGCTGGGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNAFGFL*PRLGGK
Trigger: TTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNQVQAP*GWAETE
Trigger: CTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTG...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGGCTGCTGGCTGTGCATaGAAACAGAAATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLAAGCA*KQKSGS
Trigger: CGACCCCGATTTCTGTTTGCATGCACAGCCAGCAGC...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATCTTGAACTGAGGTGGTaGCATTTAGCAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYLELRW*HLAGIA
Trigger: AGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAG...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTTGGATTATGTCTAAGTaGCAGAGGGTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRWIMSK*QRVPGV
Trigger: AACACCAGGCACCCTCTGCCACTTAGACATAATCCA...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGCTGGAATAATGAGTaGAATGGATTATGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: EAAPGNLPISMASCPALHCWNNE*NGLCLS
Trigger: ACTTAGACATAATCCATTCCACTCATTATTCCAGCA...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGATGCTGTGTAAAGTGTaGTACTTAACAATTTGCACA +
Preference number: 4 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRMLCKV*YLTICT
Trigger: TGTGCAAATTGTTAAGTACCACACTTTACACAGCAT...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCAAACGCGGACTTCTCGTaGTCTGGATCTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPNADFS*SGSQEC
Trigger: ACACTCCTGAGATCCAGACCACGAGAAGTCCGCGTT...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635183.1
3UTR CAA 72 bp AGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTCCCTTTCTTTATATTC +
Preference number: 4 (lower is better)
Translates to: RHHAVGQKQSSS*RSFQHLPFFIF
Trigger: GAATATAAAGAAAGGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTTGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTG +
Preference number: 4 (lower is better)
Translates to: LLRIDSTENDSGSFTESFCPALH*VHPGLV
Trigger: CACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACA...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp TTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTTTCTGGGGGCTCTGACTTaGCTCTGGTACACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSLQHNVLQLFISKGSSFLGALT*LWYTAL
Trigger: CAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAG...AAAAGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATCTGGGGGCTCTGACTTaGCTCTGGTACACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNLGALT*LWYTAL
Trigger: CAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAG...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TGGAATGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCCCAGACCCTGAATACTaGATGGTTAAATCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WNGLCLSGRGCLVFSLLIPDPEY*MVKSRQ
Trigger: CTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGG...GATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCTTGGTGGTTCCACTaGGCTGGGGCTGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFAWWFH*AGAVGT
Trigger: AGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCTTCAAGTCCCAGCTaGCCCCAGGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPSSPS*PQASGL
Trigger: AAGCCCTGAAGCCTGGGGCCAGCTGGGACTTGAAGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNERGPL*DSLMTL
Trigger: CAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGAACGCGGACCTCTCTaGGACAGCCTGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFERGPL*DSLMTL
Trigger: CAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGTTC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNEIPSG*GERGPL
Trigger: GAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGAAATTCCGTCGGGGTaGGGAGAACGCGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFEIPSG*GERGPL
Trigger: GAGAGGTCCGCGTTCTCCCCACCCCGACGGAATTTC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWSPCQQ*ERNSVG
Trigger: CCCGACGGAATTTCTCTCCCATTGTTGACACGGACT...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCA +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSGADS*RPGTNP
Trigger: TGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCAAACTGGGGGCTCTaGCTTGCCTCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFANWGL*LASGTQ
Trigger: CTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCAAACTGGGGGCTCTaGCTTGCCTCTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNANWGL*LASGTQ
Trigger: CTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTGTCCTGCTCTGCACTaGGTCCATCCTGGACTCGTG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNCPALH*VHPGLV
Trigger: CACGAGTCCAGGATGGACTCAGTGCAGAGCAGGACA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFVKTCP*AARESV
Trigger: CACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAAC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGTTAAGACATGCCCTTaGGCTGCCAGGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNVKTCP*AARESV
Trigger: CACGGACTCCCTGGCAGCTCAAGGGCATGTCTTAAC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTTTACTGAGAGACACGAGTaGTGGCAGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSLQHNVLQLFISKGSSFTERHE*WQMKAS
Trigger: AGAGGCCTTCATCTGCCATCACTCGTGTCTCTCAGT...AAAAGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAACGAACCCACTTGCTaGGGCCGCTTTCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNNEPTC*GRFRLP
Trigger: AGGAAGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCAGGTCCAGGCACCATaGGGTTGGGCAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFQVQAP*GWAETE
Trigger: CTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGACATGCCCTTGAGCTaGCAGGGAGTCCGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFDMPLS*QGVRVN
Trigger: GTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCAGGCACCATGCGGTTaGGCAGAAACAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFQAPCG*AETEQQ
Trigger: CTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGAAGTCCTTGCTTGGTaGTTCCACTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFEVLAW*FHWAGA
Trigger: AGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCATGGATTATGTCTAAGTaGCAGAGGGTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPWIMSK*QRVPGV
Trigger: AACACCAGGCACCCTCTGCCACTTAGACATAATCCA...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
3UTR CAA 72 bp TCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAACTCAGGACCCGATTTG +
Preference number: 4 (lower is better)
Translates to: SLCFLGVSSKAS*TNGVFNSGPDL
Trigger: CAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCAGGCTTCAGGGCTTaGACTGAGGTGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPGFRA*TEVVAF
Trigger: AAATGCCACCACCTCAGTTCAAGCCCTGAAGCCTGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TGGATTATGTCTAAGTGGCAGAGGGTGCCTGGTGTTTTCTTTGCTGATCTTCGTCTTCAAAGGCCTCTTTaGCAAATGGTGTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: WIMSKWQRVPGVFFADLRLQRPL*QMVFST
Trigger: AGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAG...ACGAAGATCAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAGACATAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCTGGGGGCTCTGACTTaGCTCTGGTACACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFLGALT*LWYTAL
Trigger: CAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTCCATCCTGGACTCGTaGTCCCTTCAAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSILDS*SLQVPA
Trigger: AGCTGGGACTTGAAGGGAGCACGAGTCCAGGATGGA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATCTAAGTGGCAGAGGGTaGCTGGTGTTTTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNLSGRG*LVFSLL
Trigger: CAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAG...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCTGCTGGCTGTGCATaGAAACAGAAATCGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNAAGCA*KQKSGS
Trigger: CGACCCCGATTTCTGTTTGCATGCACAGCCAGCAGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp AAAGATATCCATACTGCAACTTCTTCTTGTTGTTGTTCTTGTTCTTGTTGCTTGGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: KDIHTATSSCCCSCSCCLALTCL*YTALRS
Trigger: CGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGC...CAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNALTCL*YTALRS
Trigger: CGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFALTCL*YTALRS
Trigger: CGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp AAGAAATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAAGTCTCCGCTGGAATaGGGCGATAGCCTACAAGAA +
Preference number: 4 (lower is better)
Translates to: KKLVPYSQTLNTAWLNQGKSPLE*GDSLQE
Trigger: TTCTTGTAGGCTATCGCCCCATTCCAGCGGAGACTT...GCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGTGGTTCCACTGGGCTaGGGCTGTAGGCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFVVPLG*GCRHFC
Trigger: ACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCAC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATACAGAAGTCCTTGCTTaGTGGTTCCACTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNTEVLA*WFHWAG
Trigger: CCCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGCACTGAGTCCATCCTaGACTCGTGCTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFALSPS*TRAPFK
Trigger: CTTGAAGGGAGCACGAGTCCAGGATGGACTCAGTGC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGGGCCTCTTTGACAAATaGTGTTTTCAACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVGLFDK*CFQLRT
Trigger: GGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCC...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGAGTTTCCTGGGAGGGTaGAAGATATCCATACTGCAA +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLSFLGG*KISILQ
Trigger: TTGCAGTATGGATATCTTTCACCCTCCCAGGAAACT...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR TCA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGTGGTGTTTTCTTTGCTaGTCTTCGTTAAGACATGCC +
Preference number: 4 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVWCFLC*SSLRHA
Trigger: GGCATGTCTTAACGAAGATCAGCAAAGAAAACACCA...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTCTTCAAAGGCCTCTTTaGCAAATGGTGTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVLQRPL*QMVFST
Trigger: AGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAG...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp ATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCAGGTGAGACTCAACAGAAAATaGCAGTGGTTCATTCACCGA +
Preference number: 4 (lower is better)
Translates to: ISSIFPDPEYCMVKSRQVRLNRK*QWFIHR
Trigger: TCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCT...CACCTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATACTGAGAGACACGAGTaGTGGCAGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNTERHE*WQMKAS
Trigger: AGAGGCCTTCATCTGCCATCACTCGTGTCTCTCAGT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCATCATGTCCTGCTCTaGACTGAGTCCATCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFHHVLL*TESILD
Trigger: GTCCAGGATGGACTCAGTGCAGAGCAGGACATGATG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGATGGCATCATGTCCTaGTCTGCACTGAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFDGIMS*SALSPS
Trigger: GGATGGACTCAGTGCAGAGCAGGACATGATGCCATC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATACCTTCCAATTTCGATaGCATCATGTCCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNTFQFR*HHVLLC
Trigger: GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGT...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR TCA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: LLRIDSTENDSGSFTESFNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGAGACTCAACAGAAAATaGCAGTGGTTCATTCACCGA +
Preference number: 4 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLRLNRK*QWFIHR
Trigger: TCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCT...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCTAAGTGGCAGAGGGTaGCTGGTGTTTTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFLSGRG*LVFSLL
Trigger: CAGCAAAGAAAACACCAGGCACCCTCTGCCACTTAG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFSPCQQ*ERNSVG
Trigger: CCCGACGGAATTTCTCTCCCATTGTTGACACGGACT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAGTCCGTGTCAACAATaGGAGAGAAATTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSPCQQ*ERNSVG
Trigger: CCCGACGGAATTTCTCTCCCATTGTTGACACGGACT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTACATAAGTCTCCGCTaGAATGGGGCGATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNYISLR*NGAIAF
Trigger: GAAGGCTATCGCCCCATTCCAGCGGAGACTTATGTA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302441.7
ENST00000382251.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTACATAAGTCTCCGCTaGAATGGGGCGATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFYISLR*NGAIAF
Trigger: GAAGGCTATCGCCCCATTCCAGCGGAGACTTATGTA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302441.7
ENST00000382251.7
CDS-3UTR TCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAACAGAGCAGCAGCTTaGGAAGTTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNNRAAA*EVSNIS
Trigger: GGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAATTACAGAAGTCCTTaGTTGGTGGTTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFNYRSP*LVVPLG
Trigger: GCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAATTACAGAAGTCCTTaGTTGGTGGTTCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNNYRSP*LVVPLG
Trigger: GCCCAGTGGAACCACCAAGCAAGGACTTCTGTAATT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCTTGAACTGAGGTGGTaGCATTTAGCAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFLELRW*HLAGIA
Trigger: AGCAATGCCTGCTAAATGCCACCACCTCAGTTCAAG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATACCTTCCAATTTCGATaGCATCATGTCCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNTFQFR*HHVLLC
Trigger: GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTGGATTATGTCTAAGTaGCAGAGGGTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFWIMSK*QRVPGV
Trigger: AACACCAGGCACCCTCTGCCACTTAGACATAATCCA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAAGTCTCCGCTGGAATaGGGCGATAGCCTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFKSPLE*GDSLLK
Trigger: TTTTAGAAGGCTATCGCCCCATTCCAGCGGAGACTT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302441.7
ENST00000382251.7
3UTR CAA 72 bp TGGGAGGGTGAAAGATATCCATACTGCAACTTCTTCTaGTTGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: WEGERYPYCNFF*LLFLFLLLVVV
Trigger: AACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR TCA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGAGCAAAGATTGCACATaGAAGAGATTAACATCTACG +
Preference number: 4 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLSKDCT*KRLTST
Trigger: CGTAGATGTTAATCTCTTTCATGTGCAATCTTTGCT...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR GCA 90 bp ATATTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTCTGGTACACAGCTTTaGGCTCGAAATTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: IFSLQHNVLQLFISKGSSSGTQL*ARNYSV
Trigger: AACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGA...AGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp AAGAAATTAGTTCCATATTCCCAGACCCTGAATACTGCATGGTTAAATCAAGGCTCTGGTACACAGCTTTaGGCTCGAAATTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: KKLVPYSQTLNTAWLNQGSGTQL*ARNYSV
Trigger: AACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGA...GCCTTGATTTAACCATGCAGTATTCAGGGTCTGGGAATATGGAACTAATTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCAGACCCTGAATACTaGATGGTTAAATCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPDPEY*MVKSRQ
Trigger: CTGCCTTGATTTAACCATGCAGTATTCAGGGTCTGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATACCCTGAATACTGCATaGTTAAATCAAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNTLNTA*LNQGRW
Trigger: CCACCTGCCTTGATTTAACCATGCAGTATTCAGGGT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTGGCCATGCTGGAATAATGAGTaGAATGGATTATGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: WAKLKILRTRDTVYKLWPCWNNE*NGLCLS
Trigger: ACTTAGACATAATCCATTCCACTCATTATTCCAGCA...TGGCCACAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGGCCTCTTTGACAAATaGTGTTTTCAACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNGLFDK*CFQLRT
Trigger: GGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGGCCTCTTTGACAAATaGTGTTTTCAACTCAGGACC +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFGLFDK*CFQLRT
Trigger: GGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGATGCTGTGTAAAGTGTaGTACTTAACAATTTGCACA +
Preference number: 4 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWMLCKV*YLTICT
Trigger: TGTGCAAATTGTTAAGTACCACACTTTACACAGCAT...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
3UTR CAA 72 bp GAGGGTGAAAGATATCCATACTGCAACTTCTTCTTGTaGTTGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: EGERYPYCNFFL*LFLFLLLVVVV
Trigger: AACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 72 bp TCTTTGACAAATGGTGTTTTCAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGGAATAATGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SLTNGVFNSGPD*SVSVCWNNEWN
Trigger: ATTCCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTGGTGTTTTCTTTGCTaGTCTTCGTTAAGACATGCC +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNWCFLC*SSLRHA
Trigger: GGCATGTCTTAACGAAGATCAGCAAAGAAAACACCA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAGACTCAACAGAAAATaGCAGTGGTTCATTCACCGA +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFRLNRK*QWFIHR
Trigger: TCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAGACTCAACAGAAAATaGCAGTGGTTCATTCACCGA +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNRLNRK*QWFIHR
Trigger: TCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGATAGCCTTCTAAAATaGTTTTGGCCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFDSLLK*FWPANW
Trigger: CCAGTTTGCTGGCCAAAAGCATTTTAGAAGGCTATC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302441.7
ENST00000382251.7
CDS-3UTR CCA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGTCTTGTTGCTTGTTGTaGTTGTTATGGATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLSCCLL*LLWICL
Trigger: CAAACAAATCCATAACAACCACAACAAGCAACAAGA...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259622.10
3UTR CAA 72 bp GGTGAAAGATATCCATACTGCAACTTCTTCTTGTTGTaGTTCTTGTTCTTGTTGCTTGTTGTGGTTGTTATG +
Preference number: 4 (lower is better)
Translates to: GERYPYCNFFLL*FLFLLLVVVVM
Trigger: CATAACAACCACAACAAGCAACAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTATGGATATCTTTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR TCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCTTCAAAGGCCTCTTTaGCAAATGGTGTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNLQRPL*QMVFST
Trigger: AGTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR GCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTCTGGTACACAGCTTTaGGCTCGAAATTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFSGTQL*ARNYSV
Trigger: AACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTGCTGGAATAATGAGTaGAATGGATTATGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFCWNNE*NGLCLS
Trigger: ACTTAGACATAATCCATTCCACTCATTATTCCAGCA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCATGCTGTGTAAAGTGTaGTACTTAACAATTTGCACA +
Preference number: 4 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFMLCKV*YLTICT
Trigger: TGTGCAAATTGTTAAGTACCACACTTTACACAGCAT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CCA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATATGCTGTGTAAAGTGTaGTACTTAACAATTTGCACA +
Preference number: 4 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNMLCKV*YLTICT
Trigger: TGTGCAAATTGTTAAGTACCACACTTTACACAGCAT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS CCA 90 bp GGCTGGGCGGGAAAGGTCGGGCCGCCCCCGCCTGGCTCAGATCGCTaGCTCACCCGGCGGGCGCGCGCAGTTGCATTCAGCGCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: GWAGKVGPPPPGSDR*LTRRARAVAFSAAP
Trigger: TGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGGCGGGGGCGGCCCGACCTTTCCCGCCCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
ENST00000635183.1
CDS TCA 90 bp CAGCCTCGGGCGCCTCACCTTGCTGAGGCCGCTTTCGGCTTCCTCTaGCCCAGGCTGGGCGGGAAAGGTCGGGCCGCCCCCGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QPRAPHLAEAAFGFL*PRLGGKGRAAPAWL
Trigger: GAGCCAGGCGGGGGCGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGGTGAGGCGCCCGAGGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 90 bp CCGCGGAGCCAGCCTGCGGGTCGGCCATGGCGCTCGGGGCTTCGCTaGGGCCTGAGCCTGGCGGCCCTCACTCAAAACTTTGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PRSQPAGRPWRSGLR*GLSLAALTQNFEAR
Trigger: CCGGGCCTCAAAGTTTTGAGTGAGGGCCGCCAGGCTCAGGCCCCAGCGAAGCCCCGAGCGCCATGGCCGACCCGCAGGCTGGCTCCGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
CDS TCA 90 bp AGCCTGGCGGCCCTCACTCTTGCTGAGGCCGCTTTCGGCTTCCTCTaGCCCAGGCTGGGCGGGAAAGGTCGGGCCGCCCCCGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SLAALTLAEAAFGFL*PRLGGKGRAAPAWL
Trigger: GAGCCAGGCGGGGGCGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGAGTGAGGGCCGCCAGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS TCA 90 bp AGGCCCGGAACGAACCCACTTGCTGAGGCCGCTTTCGGCTTCCTCTaGCCCAGGCTGGGCGGGAAAGGTCGGGCCGCCCCCGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RPGTNPLAEAAFGFL*PRLGGKGRAAPAWL
Trigger: GAGCCAGGCGGGGGCGGCCCGACCTTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTTCCGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS TCA 90 bp GCTGGCAGGGAGCCCTCCGCCTCCCGCGGTCTACACTCTTCTCTCTaGAGCGCTCCGCCAGAGTCCGCCTACCGGGCCTTCGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: AGREPSASRGLHSSL*SAPPESAYRAFGAA
Trigger: GGCTGCACCGAAGGCCCGGTAGGCGGACTCTGGCGGAGCGCTTCAGAGAGAAGAGTGTAGACCGCGGGAGGCGGAGGGCTCCCTGCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 90 bp CCCGCCTGGCTCAGATCGCTGGCTCACCCGGCGGGCGCGCGCAGTTaGATTCAGCGCAGCGCCACTGGCTTCAGTCTGCAGACTGCGCTC +
Preference number: 5 (lower is better)
Translates to: PAWLRSLAHPAGARS*IQRSATGFSLQTAL
Trigger: GAGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 90 bp GGCTCACCCGGCGGGCGCGCGCAGTTGCATTCAGCGCAGCGCCACTaGCTTCAGTCTGCAGACTGCGCTCCCCTTCCTAGTACTGTCCGC +
Preference number: 5 (lower is better)
Translates to: GSPGGRAQLHSAQRH*LQSADCAPLPSTVR
Trigger: GCGGACAGTACTAGGAAGGGGAGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGGGCGGGCGCGCGCAGTaGCATTCAGCGCAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTGGRAQ*HSAQRH
Trigger: GTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCC...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS TCA 90 bp CAAAGTTCTGCTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTTGCTaGGGCCGCTTTCGGCTTCCTCTGACCCAGGCTGGGCGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QSSARSSAASGASPC*GRFRLPLTQAGRER
Trigger: CCTTTCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS TCA 90 bp AGCTTTACGTCCTCTGATTGGCCGGTTGTCAGGCGGTGTGAATACTaGTTGGCCGAGGCACGCTGGCAGGGAGCCCTCCGCCTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: SFTSSDWPVVRRCEY*LAEARWQGALRLPR
Trigger: CCGCGGGAGGCGGAGGGCTCCCTGCCAGCGTGCCTCGGCCAATCAGTATTCACACCGCCTGACAACCGGCCAATCAGAGGACGTAAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 90 bp CCCGGAAAGCCCCTTCTTGTCCCAGCATATGCTACAGAGAACGCGTaGGAACGCAGGGCAGGCGATGACCCATGCGGGACGCGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGKPLLVPAYATENA*ERRAGDDPCGTREE
Trigger: CTCCTCCCGCGTCCCGCATGGGTCATCGCCTGCCCTGCGTTCCCACGCGTTCTCTGTAGCATATGCTGGGACAAGAAGGGGCTTTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634526.1
CDS GCA 90 bp GTCCTCAGCGACCTAGCCCAGCACATCCCGAACTCTGCAAAGTTCTaGTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTTGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: VLSDLAQHIPNSAKF*SVFCSLGRLTLLRP
Trigger: CGGCCTCAGCAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTGCAGAGTTCGGGATGTGCTGGGCTAGGTCGCTGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 90 bp TTACGTCCTCTGATTGGCCGGTTGTCAGGCGGTGTGAATACTGATTaGCCGAGGCACGCTGGCAGGGAGCCCTCCGCCTCCCGCGGTCTA +
Preference number: 5 (lower is better)
Translates to: LRPLIGRLSGGVNTD*PRHAGREPSASRGL
Trigger: TAGACCGCGGGAGGCGGAGGGCTCCCTGCCAGCGTGCCTCGGCCAATCAGTATTCACACCGCCTGACAACCGGCCAATCAGAGGACGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 90 bp GCGCAGTTGCATTCAGCGCAGCGCCACTGGCTTCAGTCTGCAGACTaGGCTCCCCTTCCTAGTACTGTCCGCTCAGGCCCCGGAGCTTTA +
Preference number: 5 (lower is better)
Translates to: AQLHSAQRHWLQSAD*APLPSTVRSGPGAL
Trigger: TAAAGCTCCGGGGCCTGAGCGGACAGTACTAGGAAGGGGAGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 90 bp AAATCGGGGTCGCTACCCTCAAACACGAGATCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCACTGGATGGTGGAGGGGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KSGSLPSNTRSGADS*RPGTNPLDGGGGGR
Trigger: TCTCCCTCCCCCTCCACCATCCAGTGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGATCTCGTGTTTGAGGGTAGCGACCCCGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS-3UTR CAA 90 bp GCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACCAGCGACAGAAGCGCTaGTGGCCCTTCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ARESVSTMGEKFRRGGENQRQKR*WPFRQD
Trigger: GTCCTGCCTGAAGGGCCACAAGCGCTTCTGTCGCTG...GTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGTGGCGGCCCTCACTCTaGCTGAGGCCGCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: CSQVQAPCGWAETEQQLEWRPSL*LRPLSA
Trigger: AGCCGAAAGCGGCCTCAGCAAGAGTGAGGGCCGCCA...CTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 90 bp AGCCAGTCAAGTCCTCAGCGACCTAGCCCAGCACATCCCGAACTCTaGAAAGTTCTGCTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: SQSSPQRPSPAHPEL*KVLLGLLQPRAPHL
Trigger: AAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTGCAGAGTTCGGGATGTGCTGGGCTAGGTCGCTGAGGACTTGACTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 90 bp AAATCGGGGTCGCTACCCTCAAACACGAGATCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCACTTGCTGAGGCCGCTTTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: KSGSLPSNTRSGADS*RPGTNPLAEAAFGF
Trigger: GAAGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGATCTCGTGTTTGAGGGTAGCGACCCCGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCCCGGAAAGCCCCTTCTaGTCCTCGGTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCPESPF*SSVACC
Trigger: GCAGCAGGCCACCGAGGACAAGAAGGGGCTTTCCGG...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp GCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACCCCTCACTCAAAACTTaGAGGCCCGGGCTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: ARESVSTMGEKFRRGGENPSLKT*RPGLVA
Trigger: GGCTACCAGCCCGGGCCTCAAAGTTTTGAGTGAGGG...GTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS-3UTR CAA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGCCGGAAAGCCCCTTCTaGTCCTCGGTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEPESPF*SSVACC
Trigger: GCAGCAGGCCACCGAGGACAAGAAGGGGCTTTCCGG...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGCAGCGACAGAAGCGCTaGTGGCCCTTCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEQRQKR*WPFRQD
Trigger: GTCCTGCCTGAAGGGCCACAAGCGCTTCTGTCGCTG...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp GGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACCGGAAAGCCCCTTCTaGTCCTCGGTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTFVGIVVRSRHHAVGQKPESPF*SSVACC
Trigger: GCAGCAGGCCACCGAGGACAAGAAGGGGCTTTCCGG...TTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCCCGGAACGAACCCACTaGCTGAGGCCGCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPPERTH*LRPLSA
Trigger: AGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTTCCGG...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382255.7
CDS TCA 90 bp CTTCGGTGCAGCCGGCTCGCCTGTCCAGAATCTAAACCCGAGGTATaGCGGTGCCTGCAAGAGAGAAGTCACCATTTATCTCGCGGACTG +
Preference number: 5 (lower is better)
Translates to: LRCSRLACPESKPEV*RCLQERSHHLSRGL
Trigger: CAGTCCGCGAGATAAATGGTGACTTCTCTCTTGCAGGCACCGTCATACCTCGGGTTTAGATTCTGGACAGGCGAGCCGGCTGCACCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp CTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGTACAGAAGTCCTTGCTaGGTGGTTCCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LELPGSPCQQWERNSVGVYRSPC*VVPLGW
Trigger: CCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGTA...CACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS GCA 90 bp GCCGGCTCGCCTGTCCAGAATCTAAACCCGAGGTATGACGGTGCCTaGAAGAGAGAAGTCACCATTTATCTCGCGGACTGGGAAACAAGC +
Preference number: 5 (lower is better)
Translates to: AGSPVQNLNPRYDGA*KREVTIYLADWETS
Trigger: GCTTGTTTCCCAGTCCGCGAGATAAATGGTGACTTCTCTCTTGCAGGCACCGTCATACCTCGGGTTTAGATTCTGGACAGGCGAGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 90 bp AGATATCCAGCTTTAGGATCTGGCGCTAGGGCTGCTGGCTGTGCATaGAAACAGAAATCGGGGTCGCTACCCTCAAACACGAGATCGGGA +
Preference number: 5 (lower is better)
Translates to: RYPALGSGARAAGCA*KQKSGSLPSNTRSG
Trigger: TCCCGATCTCGTGTTTGAGGGTAGCGACCCCGATTTCTGTTTGCATGCACAGCCAGCAGCCCTAGCGCCAGATCCTAAAGCTGGATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
CDS-3UTR CAA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGACTGGGGGCTCTGACTaGCCTCTGGTACACAGCTTT +
Preference number: 5 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTETGGSD*PLVHSF
Trigger: AAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAGT...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCGTCGGGGTGGGGAGAACGAAATTACAGAAGTCCTaGCTTGGTGGTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: PGSPCQQWERNSVGVGRTKLQKS*LGGSTG
Trigger: CCCAGTGGAACCACCAAGCAAGGACTTCTGTAATTT...CGTTCTCCCCACCCCGACGGAATTTCTCTCCCATTGTTGACACGGACTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CGAGTGATGGCAGATGAAGGCCTCTTAAGAATAGACTCAACAGAAAATGACAGTACCACCAGCAGGCAGTaGGCGCACTGGCAGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RVMADEGLLRIDSTENDSTTSRQ*AHWQSR
Trigger: GCGCGACTGCCAGTGCGCCAACTGCCTGCTGGTGGT...ACTGTCATTTTCTGTTGAGTCTATTCTTAAGAGGCCTTCATCTGCCATCACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp TTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTTTGGCGGGCGCGCGCAGTaGCATTCAGCGCAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: FSLQHNVLQLFISKGSSFGGRAQ*HSAQRH
Trigger: GTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCC...AAAAGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCACCTCTGATTGGCCGGTaGTCAGGCGGTGTGAATACT +
Preference number: 5 (lower is better)
Translates to: CRHFCRNCSQVQAPCGWAPLIGR*SGGVNT
Trigger: AGTATTCACACCGCCTGACAACCGGCCAATCAGAGG...TGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp TGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGT +
Preference number: 5 (lower is better)
Translates to: CSQVQAPCGWAETEQQLELWYTA*RSKLFC
Trigger: ACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAG...CTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp ACGCGGACCTCTCTGGGACAGCCTGATGACCCTGAAGGTCACTTCTCGTGGTCTCATTCACCGAGAGTTTaGTTCCAACTTGTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: TRTSLGQPDDPEGHFSWSHSPRV*FQLVWL
Trigger: TAGCCAAACAAGTTGGAACAAAACTCTCGGTGAATG...AGACCACGAGAAGTGACCTTCAGGGTCATCAGGCTGTCCCAGAGAGGTCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp GGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTCAGAAAGACCAGTATaGGCCTCTATCAGCATCACA +
Preference number: 5 (lower is better)
Translates to: GIVVRSRHHAVGQKQSSSSERPV*ASISIT
Trigger: TGTGATGCTGATAGAGGCCAATACTGGTCTTTCTGA...GCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGT +
Preference number: 5 (lower is better)
Translates to: EAAPGNLPISMASCPALHLWYTA*RSKLFC
Trigger: ACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAG...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp GAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTC +
Preference number: 5 (lower is better)
Translates to: EAAPGNLPISMASCPALHKQSSS*RSFQHL
Trigger: GAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTT...GTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp AGAAGTCCTTGCTTGGTGGTTCCACTGGGCTGGGGCTGTAGGCACTTTTGTAGGCTAATGGGGCCACACTaGGGCCAAACTAAAAATCTT +
Preference number: 5 (lower is better)
Translates to: RSPCLVVPLGWGCRHFCRLMGPH*GQTKNL
Trigger: AAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAG...CCTACAAAAGTGCCTACAGCCCCAGCCCAGTGGAACCACCAAGCAAGGACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTGAGAAGTTTCCAACATCTCCCAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PCGWAETEQQLEKFPTSPNSGPD*SVSVCW
Trigger: CCAGCAAACACTTACTGACAAATCGGGTCCTGAGTT...GGGAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTTCTGCCCAACCGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGGCGGGCGCGCGCAGTaGCATTCAGCGCAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNGGRAQ*HSAQRH
Trigger: GTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGCAGCGACAGAAGCGCTaGTGGCCCTTCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLQRQKR*WPFRQD
Trigger: GTCCTGCCTGAAGGGCCACAAGCGCTTCTGTCGCTG...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp TGGGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGT +
Preference number: 5 (lower is better)
Translates to: WAGAVGTFVGIVVRSRHHLWYTA*RSKLFC
Trigger: ACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAG...ATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTC +
Preference number: 5 (lower is better)
Translates to: RHALELPGSPCQQWERNSKQSSS*RSFQHL
Trigger: GAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTT...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATTACAGAAGTCCTTGCTaGGTGGTTCCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYYRSPC*VVPLGW
Trigger: CCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGTA...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAAAATTACAGAAGTCCTaGCTTGGTGGTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: CRHFCRNCSQVQAPCGWAKLQKS*LGGSTG
Trigger: CCCAGTGGAACCACCAAGCAAGGACTTCTGTAATTT...TGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp AGACATGCCCTTGAGCTGCCAGGGAGTCCGTGTCAACAATGGGAGAGAAATTCCTGCCTGGTGTTTTCTTaGCTGATCTTCGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: RHALELPGSPCQQWERNSCLVFS*LIFVKT
Trigger: TGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCA...GGAATTTCTCTCCCATTGTTGACACGGACTCCCTGGCAGCTCAAGGGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp AATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAACAGAGCAGCAGCTTTGCCTGGTGTTTTCTTaGCTGATCTTCGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: NCSQVQAPCGWAETEQQLCLVFS*LIFVKT
Trigger: TGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCA...AAGCTGCTGCTCTGTTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCTCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCSSKAS*TNGVFN
Trigger: GTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGA...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCGGAAAGCCCCTTCTaGTCCTCGGTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPESPF*SSVACC
Trigger: GCAGCAGGCCACCGAGGACAAGAAGGGGCTTTCCGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp GTGAGGCAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCTTGTTATGGATTTGTTaGCTTGCTTGCTTCAACAGA +
Preference number: 5 (lower is better)
Translates to: VRQHQGTFQFRWHHVLLCLLWIC*LACFNR
Trigger: TCTGTTGAAGCAAGCAAGCAAACAAATCCATAACAA...GCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTGCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp GGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCTCTTGTTCTTGTTGCTaGTTGTGGTTGTTATGGATT +
Preference number: 5 (lower is better)
Translates to: GWGCRHFCRNCSQVQAPCSCSCC*LWLLWI
Trigger: AATCCATAACAACCACAACAAGCAACAAGAACAAGA...GCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS CCA 90 bp TATGACGGTGCCTGCAAGAGAGAAGTCACCATTTATCTCGCGGACTaGGAAACAAGCAGAGATACATTCTTAGGAATGCGTTGTCCACAA +
Preference number: 5 (lower is better)
Translates to: YDGACKREVTIYLAD*ETSRDTFLGMRCPQ
Trigger: TTGTGGACAACGCATTCCTAAGAATGTATCTCTGCTTGTTTCCCAGTCCGCGAGATAAATGGTGACTTCTCTCTTGCAGGCACCGTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCAGCGACAGAAGCGCTaGTGGCCCTTCAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFQRQKR*WPFRQD
Trigger: GTCCTGCCTGAAGGGCCACAAGCGCTTCTGTCGCTG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TGGGCTGGGGCTGTAGGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATTATGGATTTGTTTGCTaGCTTGCTTCAACAGACATA +
Preference number: 5 (lower is better)
Translates to: WAGAVGTFVGIVVRSRHHYGFVC*LASTDI
Trigger: TATGTCTGTTGAAGCAAGCAAGCAAACAAATCCATA...ATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCCTACAGCCCCAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp CAGCACCAGGGAACCTTCCAATTTCGATGGCATCATGTCCTGCTCTGCACTGAGTACTGCAACTTCTTCTaGTTGTTGTTCTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QHQGTFQFRWHHVLLCTEYCNFF*LLFLFL
Trigger: CAAGAACAAGAACAACAACAAGAAGAAGTTGCAGTA...CTCAGTGCAGAGCAGGACATGATGCCATCGAAATTGGAAGGTTCCCTGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp GGCACTTTTGTAGGAATTGTAGTCAGGTCCAGGCACCATGCGGTTGGGCAGAAATCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: GTFVGIVVRSRHHAVGQKSSKAS*TNGVFN
Trigger: GTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGA...TTTCTGCCCAACCGCATGGTGCCTGGACCTGACTACAATTCCTACAAAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCGGAACGAACCCACTaGCTGAGGCCGCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPERTH*LRPLSA
Trigger: AGCCGAAAGCGGCCTCAGCAAGTGGGTTCGTTCCGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp ATATTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTACTGGGGGCTCTGACTaGCCTCTGGTACACAGCTTT +
Preference number: 5 (lower is better)
Translates to: IFSLQHNVLQLFISKGSSTGGSD*PLVHSF
Trigger: AAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAGT...AGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATCTAATGGGGCCACACTaGGGCCAAACTAAAAATCTT +
Preference number: 5 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYLMGPH*GQTKNL
Trigger: AAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAG...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp GTGTCGCTAATGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGAGTGGTACTTAACAATTaGCACATTGGGCAATTTCCA +
Preference number: 5 (lower is better)
Translates to: VSLMGPHLGQTKNLEDKGVVLNN*HIGQFP
Trigger: TGGAAATTGCCCAATGTGCAAATTGTTAAGTACCAC...TCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAGCGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCCGGAAAGCCCCTTCTaGTCCTCGGTGGCATCGATC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNPESPF*SSVASI
Trigger: GATCGATGCCACCGAGGACAAGAAGGGGCTTTCCGG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302441.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCCCTCACTCAAAACTTaGAGGCCCGGGCTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNPSLKT*RPGLVA
Trigger: GGCTACCAGCCCGGGCCTCAAAGTTTTGAGTGAGGG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTACAGATTAGGTTaGAAAGAGTTTCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYKYRLG*KEFPGR
Trigger: CCTCCCAGGAAACTCTTTCAAACCTAATCTGTACTT...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATACTGGGGGCTCTGACTaGCCTCTGGTACACAGCTTT +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNTGGSD*PLVHSF
Trigger: AAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAGT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTACAGAAGTCCTTGCTaGGTGGTTCCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNYRSPC*VVPLGW
Trigger: CCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGTA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTACAGAAGTCCTTGCTaGGTGGTTCCACTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFYRSPC*VVPLGW
Trigger: CCAGCCCAGTGGAACCACCAAGCAAGGACTTCTGTA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS CCA 90 bp AGAGAAGGTAATAAACGACGAGGAAGAGATCAGAAAGACCAGTATTaGCCTCTATCAGCATCACAAGCATTTCTGCGACTCAATCAATCA +
Preference number: 5 (lower is better)
Translates to: REGNKRRGRDQKDQY*PLSASQAFLRLNQS
Trigger: TGATTGATTGAGTCGCAGAAATGCTTGTGATGCTGATAGAGGCCAATACTGGTCTTTCTGATCTCTTCCTCGTCGTTTATTACCTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS-3UTR CAA 90 bp TGGGGCCACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATTTGTTCTTGTTCTTGTaGCTTGTTGTGGTTGTTATG +
Preference number: 5 (lower is better)
Translates to: WGHTWAKLKILRTRDTVYLFLFL*LVVVVM
Trigger: CATAACAACCACAACAAGCAACAAGAACAAGAACAA...ATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTGGCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTC +
Preference number: 5 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLKQSSS*RSFQHL
Trigger: GAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTT...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp TTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGCTAATGGGGCCACACTaGGGCCAAACTAAAAATCTT +
Preference number: 5 (lower is better)
Translates to: FDKWCFQLRTRFVSKCLLLMGPH*GQTKNL
Trigger: AAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAG...CAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp ATATTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: IFSLQHNVLQLFISKGSSNSGPD*SVSVCW
Trigger: CCAGCAAACACTTACTGACAAATCGGGTCCTGAGTT...AGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp AATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: NGVFNSGPDLSVSVCWNNNSGPD*SVSVCW
Trigger: CCAGCAAACACTTACTGACAAATCGGGTCCTGAGTT...ATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259622.10
ENST00000382255.7
ENST00000635183.1
CDS-3UTR CAA 90 bp CACTCTCTGTGTTTCTTAGGGGTCTCTTCAAAGGCCTCTTTGACAAATGGTGTTTTCTTGTTGTTGTTCTaGTTCTTGTTGCTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: HSLCFLGVSSKASLTNGVFLLLF*FLLLVV
Trigger: CACAACAAGCAACAAGAACAAGAACAACAACAAGAA...AACACCATTTGTCAAAGAGGCCTTTGAAGAGACCCCTAAGAAACACAGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp AAAGGCCTCTTTGACAAATGGTGTTTTCAACTCAGGACCCGATTTGTCAGTAAGGAGTTTTGTTCCAACTaGTTTGGCTACAAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: KGLFDKWCFQLRTRFVSKEFCSN*FGYKKV
Trigger: GACCTTTTTGTAGCCAAACAAGTTGGAACAAAACTC...CTTACTGACAAATCGGGTCCTGAGTTGAAAACACCATTTGTCAAAGAGGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp CGAGTGATGGCAGATGAAGGCCTCTTAAGAATAGACTCAACAGAAAATGACAGTGAGTTTTGTTCCAACTaGTTTGGCTACAAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: RVMADEGLLRIDSTENDSEFCSN*FGYKKV
Trigger: GACCTTTTTGTAGCCAAACAAGTTGGAACAAAACTC...ACTGTCATTTTCTGTTGAGTCTATTCTTAAGAGGCCTTCATCTGCCATCACTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCCTTCTAAAATGCTTTaGGCCAGCAAACTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFPSKML*ASKLGA
Trigger: AGCCCCCAGTTTGCTGGCCAAAAGCATTTTAGAAGG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302441.7
ENST00000382251.7
CDS-3UTR CAA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGGTGGTTGTTATGGATTaGTTTGCTTGCTTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLVVVMD*FACLLQ
Trigger: TTGAAGCAAGCAAGCAAACAAATCCATAACAACCAC...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp GTTTTCAACTCAGGACCCGATTTGTCAGTAAGTGTTTGCTGGAATAATGAGTGGTTGTTGTTCTTGTTCTaGTTGCTTGTTGTGGTTGTT +
Preference number: 5 (lower is better)
Translates to: VFNSGPDLSVSVCWNNEWLLFLF*LLVVVV
Trigger: AACAACCACAACAAGCAACAAGAACAAGAACAACAA...CCACTCATTATTCCAGCAAACACTTACTGACAAATCGGGTCCTGAGTTGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAAATTACAGAAGTCCTaGCTTGGTGGTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFKLQKS*LGGSTG
Trigger: CCCAGTGGAACCACCAAGCAAGGACTTCTGTAATTT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp GAAACCCAGAAGGTAACAGCAACACTACAGATCAGCAGAACAATTATTTACAGTTGCCTGGTGTTTTCTTaGCTGATCTTCGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: ETQKVTATLQISRTIIYSCLVFS*LIFVKT
Trigger: TGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCA...ACTGTAAATAATTGTTCTGCTGATCTGTAGTGTTGCTGTTACCTTCTGGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAACTCAGGACCCGATTaGTCAGTAAGTGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNNSGPD*SVSVCW
Trigger: CCAGCAAACACTTACTGACAAATCGGGTCCTGAGTT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTCTCTCTCCAGCATAATGTTCTCCAACTCTTTATCAGCAAAGGCTCTTCTTTTCATTCACCGAGAGTTTaGTTCCAACTTGTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: FSLQHNVLQLFISKGSSFHSPRV*FQLVWL
Trigger: TAGCCAAACAAGTTGGAACAAAACTCTCGGTGAATG...AAAAGAAGAGCCTTTGCTGATAAAGAGTTGGAGAACATTATGCTGGAGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp CACACTTGGGCCAAACTAAAAATCTTGAGGACAAGGGATACTGTCTATAAGTTGGTGGTACTTAACAATTaGCACATTGGGCAATTTCCA +
Preference number: 5 (lower is better)
Translates to: HTWAKLKILRTRDTVYKLVVLNN*HIGQFP
Trigger: TGGAAATTGCCCAATGTGCAAATTGTTAAGTACCAC...CAACTTATAGACAGTATCCCTTGTCCTCAAGATTTTTAGTTTGGCCCAAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259622.10
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGT +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNLWYTA*RSKLFC
Trigger: ACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGT +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFLWYTA*RSKLFC
Trigger: ACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTC +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFKQSSS*RSFQHL
Trigger: GAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTT...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATAAACAGAGCAGCAGCTaGAGAAGTTTCCAACATCTC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNKQSSS*RSFQHL
Trigger: GAGATGTTGGAAACTTCTCAAGCTGCTGCTCTGTTT...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCTAATGGGGCCACACTaGGGCCAAACTAAAAATCTT +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFLMGPH*GQTKNL
Trigger: AAGATTTTTAGTTTGGCCCAAGTGTGGCCCCATTAG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTGCCTGGTGTTTTCTTaGCTGATCTTCGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFCLVFS*LIFVKT
Trigger: TGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTGCCTGGTGTTTTCTTaGCTGATCTTCGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNCLVFS*LIFVKT
Trigger: TGTCTTAACGAAGATCAGCAAAGAAAACACCAGGCA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATCATTCACCGAGAGTTTaGTTCCAACTTGTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNHSPRV*FQLVWL
Trigger: TAGCCAAACAAGTTGGAACAAAACTCTCGGTGAATG...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCCATTCACCGAGAGTTTaGTTCCAACTTGTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFHSPRV*FQLVWL
Trigger: TAGCCAAACAAGTTGGAACAAAACTCTCGGTGAATG...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTCTTAAGAATAGACTCAACAGAAAATGACAGTGGTTCATTCACCGAGAGTTTTTGTTGCTTGTTGTGGTaGTTATGGATTTGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LLRIDSTENDSGSFTESFCCLLW*LWICLL
Trigger: AAGCAAACAAATCCATAACAACCACAACAAGCAACA...AAAACTCTCGGTGAATGAACCACTGTCATTTTCTGTTGAGTCTATTCTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259622.10
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNSSKAS*TNGVFN
Trigger: GTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGA...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCTCTTCAAAGGCCTCTTaGACAAATGGTGTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFSSKAS*TNGVFN
Trigger: GTTGAAAACACCATTTGTCAAAGAGGCCTTTGAAGA...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp CTTTTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATGAGTTTTGTTCCAACTaGTTTGGCTACAAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LFEMLCKVWYLTICTLGNEFCSN*FGYKKV
Trigger: GACCTTTTTGTAGCCAAACAAGTTGGAACAAAACTC...ATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS-3UTR CAA 90 bp TTTGAAATGCTGTGTAAAGTGTGGTACTTAACAATTTGCACATTGGGCAATTTCGTGGTACTTAACAATTaGCACATTGGGCAATTTCCA +
Preference number: 5 (lower is better)
Translates to: FEMLCKVWYLTICTLGNFVVLNN*HIGQFP
Trigger: TGGAAATTGCCCAATGTGCAAATTGTTAAGTACCAC...GAAATTGCCCAATGTGCAAATTGTTAAGTACCACACTTTACACAGCATTTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000382251.7
ENST00000382255.7
CDS CCA 72 bp GGAAAGGTCGGGCCGCCCCCGCCTGGCTCAGATCGCTaGCTCACCCGGCGGGCGCGCGCAGTTGCATTCAGC +
Preference number: 6 (lower is better)
Translates to: GKVGPPPPGSDR*LTRRARAVAFS
Trigger: GCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGGCGGGGGCGGCCCGACCTTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
ENST00000635183.1
CDS CAA 90 bp CCCCGCCTGGCTCAGATCGCTGGCTCACCCGGCGGGCGCGCGCAGTaGCATTCAGCGCAGCGCCACTGGCTTCAGTCTGCAGACTGCGCT +
Preference number: 6 (lower is better)
Translates to: PRLAQIAGSPGGRAQ*HSAQRHWLQSADCA
Trigger: AGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAGCCAGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 72 bp GAGAACGCGTGGGAACGCAGGGCAGGCGATGACCCATaGGGGACGCGGGAGGAGACCAAGCCCAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: ENAWERRAGDDP*GTREETKPRTR
Trigger: CCTGGTCCTGGGCTTGGTCTCCTCCCGCGTCCCGCATGGGTCATCGCCTGCCCTGCGTTCCCACGCGTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634526.1
CDS TCA 72 bp GCTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTTGCTaGGGCCGCTTTCGGCTTCCTCTGACCCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ARSSAASGASPC*GRFRLPLTQAG
Trigger: CCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS TCA 72 bp GAGCCCTCCGCCTCCCGCGGTCTACACTCTTCTCTCTaGAGCGCTCCGCCAGAGTCCGCCTACCGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EPSASRGLHSSL*SAPPESAYRAF
Trigger: GAAGGCCCGGTAGGCGGACTCTGGCGGAGCGCTTCAGAGAGAAGAGTGTAGACCGCGGGAGGCGGAGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 72 bp CTCAGATCGCTGGCTCACCCGGCGGGCGCGCGCAGTTaGATTCAGCGCAGCGCCACTGGCTTCAGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LRSLAHPAGARS*IQRSATGFSLQ
Trigger: CTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 72 bp GCTCAGATCGCTGGCTCACCCGGCGGGCGCGCGCAGTaGCATTCAGCGCAGCGCCACTGGCTTCAGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AQIAGSPGGRAQ*HSAQRHWLQSA
Trigger: TGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCCGGGTGAGCCAGCGATCTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 72 bp GGCGGGCGCGCGCAGTTGCATTCAGCGCAGCGCCACTaGCTTCAGTCTGCAGACTGCGCTCCCCTTCCTAGT +
Preference number: 6 (lower is better)
Translates to: GGRAQLHSAQRH*LQSADCAPLPS
Trigger: ACTAGGAAGGGGAGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATGCAACTGCGCGCGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 72 bp TTCTGCTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTaGCTGAGGCCGCTTTCGGCTTCCTCTGACCCAGGC +
Preference number: 6 (lower is better)
Translates to: FCSVFCSLGRLT*LRPLSASSDPG
Trigger: GCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CAA 90 bp TCTGCAAAGTTCTGCTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTaGCTGAGGCCGCTTTCGGCTTCCTCTGACCCAGGCTGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: SAKFCSVFCSLGRLT*LRPLSASSDPGWAG
Trigger: TCCCGCCCAGCCTGGGTCAGAGGAAGCCGAAAGCGGCCTCAGCAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS TCA 72 bp TCCTCTGATTGGCCGGTTGTCAGGCGGTGTGAATACTaGTTGGCCGAGGCACGCTGGCAGGGAGCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SSDWPVVRRCEY*LAEARWQGALR
Trigger: GCGGAGGGCTCCCTGCCAGCGTGCCTCGGCCAATCAGTATTCACACCGCCTGACAACCGGCCAATCAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 72 bp CATTCAGCGCAGCGCCACTGGCTTCAGTCTGCAGACTaGGCTCCCCTTCCTAGTACTGTCCGCTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: HSAQRHWLQSAD*APLPSTVRSGP
Trigger: GGGGCCTGAGCGGACAGTACTAGGAAGGGGAGCGCAGTCTGCAGACTGAAGCCAGTGGCGCTGCGCTGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 90 bp ACTGTCCGCTCAGGCCCCGGAGCTTTACGTCCTCTGATTGGCCGGTaGTCAGGCGGTGTGAATACTGATTGGCCGAGGCACGCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: TVRSGPGALRPLIGR*SGGVNTDWPRHAGR
Trigger: CCTGCCAGCGTGCCTCGGCCAATCAGTATTCACACCGCCTGACAACCGGCCAATCAGAGGACGTAAAGCTCCGGGGCCTGAGCGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 72 bp CCCCTTCTTGTCCCAGCATATGCTACAGAGAACGCGTaGGAACGCAGGGCAGGCGATGACCCATGCGGGACG +
Preference number: 6 (lower is better)
Translates to: PLLVPAYATENA*ERRAGDDPCGT
Trigger: CGTCCCGCATGGGTCATCGCCTGCCCTGCGTTCCCACGCGTTCTCTGTAGCATATGCTGGGACAAGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634526.1
CDS GCA 72 bp GACCTAGCCCAGCACATCCCGAACTCTGCAAAGTTCTaGTCGGTCTTCTGCAGCCTCGGGCGCCTCACCTTG +
Preference number: 6 (lower is better)
Translates to: DLAQHIPNSAKF*SVFCSLGRLTL
Trigger: CAAGGTGAGGCGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTGCAGAGTTCGGGATGTGCTGGGCTAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS GCA 72 bp AGTCCTCAGCGACCTAGCCCAGCACATCCCGAACTCTaGAAAGTTCTGCTCGGTCTTCTGCAGCCTCGGGCG +
Preference number: 6 (lower is better)
Translates to: SPQRPSPAHPEL*KVLLGLLQPRA
Trigger: CGCCCGAGGCTGCAGAAGACCGAGCAGAACTTTGCAGAGTTCGGGATGTGCTGGGCTAGGTCGCTGAGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 72 bp ACCCACTGGATGGTGGAGGGGGAGGGAGAAGGTAGGTaGAGGGAAGGAGGGAGGAAGCCAGTCAAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: THWMVEGEGEGR*REGGRKPVKSS
Trigger: TGAGGACTTGACTGGCTTCCTCCCTCCTTCCCTCCACCTACCTTCTCCCTCCCCCTCCACCATCCAGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 72 bp TCGCTACCCTCAAACACGAGATCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCACTGGATGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: SLPSNTRSGADS*RPGTNPLDGGG
Trigger: CCCTCCACCATCCAGTGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGATCTCGTGTTTGAGGGTAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358146.7
ENST00000412350.6
CDS CCA 72 bp TCGCTACCCTCAAACACGAGATCGGGAGCTGATAGCTaGAGGCCCGGAACGAACCCACTTGCTGAGGCCGCT +
Preference number: 6 (lower is better)
Translates to: SLPSNTRSGADS*RPGTNPLAEAA
Trigger: AGCGGCCTCAGCAAGTGGGTTCGTTCCGGGCCTCCAGCTATCAGCTCCCGATCTCGTGTTTGAGGGTAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382251.7
ENST00000382255.7
CDS CAA 72 bp TCAGGCCCCGGAGCTTTACGTCCTCTGATTGGCCGGTaGTCAGGCGGTGTGAATACTGATTGGCCGAGGCAC +
Preference number: 6 (lower is better)
Translates to: SGPGALRPLIGR*SGGVNTDWPRH
Trigger: GTGCCTCGGCCAATCAGTATTCACACCGCCTGACAACCGGCCAATCAGAGGACGTAAAGCTCCGGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 72 bp CGCTCGAAATTATTCTGTTTCCCGGAAAGCCCCTTCTaGTCCTCGGTGGCATCGATCTCCCAGTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RSKLFCFPESPF*SSVASISQSPA
Trigger: GGCCGGGGACTGGGAGATCGATGCCACCGAGGACAAGAAGGGGCTTTCCGGGAAACAGAATAATTTCGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302441.7
CDS GCA 72 bp GCTTTAGGATCTGGCGCTAGGGCTGCTGGCTGTGCATaGAAACAGAAATCGGGGTCGCTACCCTCAAACACG +
Preference number: 6 (lower is better)
Translates to: ALGSGARAAGCA*KQKSGSLPSNT
Trigger: CGTGTTTGAGGGTAGCGACCCCGATTTCTGTTTGCATGCACAGCCAGCAGCCCTAGCGCCAGATCCTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
CDS TCA 72 bp AGCCGGCTCGCCTGTCCAGAATCTAAACCCGAGGTATaGCGGTGCCTGCAAGAGAGAAGTCACCATTTATCT +
Preference number: 6 (lower is better)
Translates to: SRLACPESKPEV*RCLQERSHHLS
Trigger: AGATAAATGGTGACTTCTCTCTTGCAGGCACCGTCATACCTCGGGTTTAGATTCTGGACAGGCGAGCCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS GCA 72 bp CCTGTCCAGAATCTAAACCCGAGGTATGACGGTGCCTaGAAGAGAGAAGTCACCATTTATCTCGCGGACTGG +
Preference number: 6 (lower is better)
Translates to: PVQNLNPRYDGA*KREVTIYLADW
Trigger: CCAGTCCGCGAGATAAATGGTGACTTCTCTCTTGCAGGCACCGTCATACCTCGGGTTTAGATTCTGGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 72 bp AAACTGGGGGCTCTGACTTGCCTCTGGTACACAGCTTaGCGCTCGAAATTATTCTGTTTCCCGGAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: KLGALTCLWYTA*RSKLFCFPESP
Trigger: GGGGCTTTCCGGGAAACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
ENST00000634526.1
ENST00000635183.1
CDS CCA 72 bp CTTTTGGCCAGCAAACTGGGGGCTCTGACTTGCCTCTaGTACACAGCTTTGCGCTCGAAATTATTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLASKLGALTCL*YTALRSKLFCF
Trigger: GAAACAGAATAATTTCGAGCGCAAAGCTGTGTACCAGAGGCAAGTCAGAGCCCCCAGTTTGCTGGCCAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000259622.10
ENST00000302441.7
ENST00000358146.7
ENST00000382251.7
ENST00000382255.7
ENST00000412350.6
ENST00000634526.1
ENST00000635183.1
CDS CCA 72 bp GCCTGCAAGAGAGAAGTCACCATTTATCTCGCGGACTaGGAAACAAGCAGAGATACATTCTTAGGAATGCGT +
Preference number: 6 (lower is better)
Translates to: ACKREVTIYLAD*ETSRDTFLGMR
Trigger: ACGCATTCCTAAGAATGTATCTCTGCTTGTTTCCCAGTCCGCGAGATAAATGGTGACTTCTCTCTTGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CAA 90 bp TCTCGCGGACTGGGAAACAAGCAGAGATACATTCTTAGGAATGCGTaGTCCACAAGAGAAGGTAATAAACGACGAGGAAGAGATCAGAAA +
Preference number: 6 (lower is better)
Translates to: SRGLGNKQRYILRNA*STREGNKRRGRDQK
Trigger: TTTCTGATCTCTTCCTCGTCGTTTATTACCTTCTCTTGTGGACAACGCATTCCTAAGAATGTATCTCTGCTTGTTTCCCAGTCCGCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1
CDS CCA 72 bp AATAAACGACGAGGAAGAGATCAGAAAGACCAGTATTaGCCTCTATCAGCATCACAAGCATTTCTGCGACTC +
Preference number: 6 (lower is better)
Translates to: NKRRGRDQKDQY*PLSASQAFLRL
Trigger: GAGTCGCAGAAATGCTTGTGATGCTGATAGAGGCCAATACTGGTCTTTCTGATCTCTTCCTCGTCGTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635183.1