Pregenerated sensors for DLX6 (Homo sapiens)
Ensembl gene IDs: ENSG00000006377Ensembl transcript IDs: ENST00000493273.2, ENST00000518156.3, ENST00000555308.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATaGGCTCTCCTAAGCCTGCTCCTTTGGCTCCTTTTCGCAGATACA | + |
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Preference number: 1 (lower is better) Translates to: REGERMSLVGFLPHL*ALLSLLLWLLFADT Trigger: TGTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR GCA 90 bp | GGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATaGTCTTTCTCTCTCTCTGAGATGCAAGATCAATTACTGACGTTG | + |
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Preference number: 1 (lower is better) Translates to: GFQECWHRNQFLSHT*SFSLSEMQDQLLTL Trigger: CAACGTCAGTAATTGATCTTGCATCTCAGAGAGAGAGAAAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR CAA 90 bp | AGTCGGCTTCTTGCCACACTTATGAGCTCTCCTAAGCCTGCTCCTTaGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SRLLATLMSSPKPAP*APFRRYKQVPDPLF Trigger: GAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAAGCCGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR CCA 90 bp | AGAATGGTGATTTTGATTGTTTCCTCCGTCTTTCCTGATTCCAGTTCAGGGTTTCTAAGCCTGCTCCTTTaGCTCCTTTTCGCAGATACA | + |
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Preference number: 2 (lower is better) Translates to: RMVILIVSSVFPDSSSGFLSLLL*LLFADT Trigger: TGTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAG...AAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAATCACCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAAGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACACTCTTTCTCTCTCTCTaGGATGCAAGATCAATTACT | + |
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Preference number: 2 (lower is better) Translates to: KRRDSEPGSQGVRENILTLFLSL*DARSIT Trigger: AGTAATTGATCTTGCATCTCAGAGAGAGAGAAAGAG...TGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCTTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACTCATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTGCAAGATCAATTACTaGCGTTGCTCAAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LKLIKQVKTLPSLCRFFWCKINY*RCSREK Trigger: CTTCTCTCTTGAGCAACGTCAGTAATTGATCTTGCA...CCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAATGAGTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGCGGATCCTCTTTTCCTaGTTCAGACGTTTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: ERERGRENEPSRLLATLMRILFS*FRRFPR Trigger: CCTAGGGAAACGTCTGAACAAGGAAAAGAGGATCCG...CATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACAGTAAGGCCTAAGCCTGCTCCTTaGGCTCCTTTTCGCAGATAC | + |
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Preference number: 3 (lower is better) Translates to: RDSEPGSQGVRENILTVRPKPAP*APFRRY Trigger: GTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAGG...CCTTACTGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR GCA 72 bp | GAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATaGTCTTTCTCTCTCTCTGAGATGCAAGATCAATTA | + |
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Preference number: 3 (lower is better) Translates to: ECWHRNQFLSHT*SFSLSEMQDQL Trigger: TAATTGATCTTGCATCTCAGAGAGAGAGAAAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCAGATCAATTACTGACGTaGCTCAAGAGAGAAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: VPISFVNATNSPSKGVKADQLLT*LKREGK Trigger: TTTACCTTCTCTCTTGAGCAACGTCAGTAATTGATC...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | GAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTCCTAAGCCTGCTAGTGCGCGCCTGCCATaGCCGGGGAGCTCTGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: ENEPSRLLATLMSSPKPASARLP*PGSSAA Trigger: CGCAGCAGAGCTCCCCGGCCATGGCAGGCGCGCACT...AGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTGGTGGTGGTGGTGGTaGTGCGAGCCGGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SFGSFSQIQAGPGSSFPCWWWWW*CEPAAA Trigger: GGCAGCGGCCGGCTCGCACCACCACCACCACCACCA...ACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCTTGCTGGTGGTGGTGGTaGTGGTGCGAGCCGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: FADTSRSRILFSLFRRFPCWWWW*WCEPAA Trigger: AGCGGCCGGCTCGCACCACCACCACCACCACCAGCA...AGGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTGGTGCTGGTGGTGGTaGTGGTGGTGCGAGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFGSFSQIQAGPGSSFPCWCWWW*WWCEPA Trigger: GGCCGGCTCGCACCACCACCACCACCACCAGCACCA...ACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | GAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTCCTAAGCCTGCTTCGCGTCTGGGCGGCTaGGCTGCTGTTGTGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: ENEPSRLLATLMSSPKPASRLGG*AAVVVG Trigger: TCCTACCACAACAGCAGCGCAGCCGCCCAGACGCGA...AGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | AGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACAGTAAGGCCACCCTCCCCCACTTaGCTCGCGCCGCTCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RDSEPGSQGVRENILTVRPPSPT*LAPLSP Trigger: AGGGGAGAGCGGCGCGAGCCAAGTGGGGGAGGGTGG...CCTTACTGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCAGGGGGTCGCTCTCATaGGGATTACTGCCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RERGRENEPSRLLATLMSRGSLS*GLLPCF Trigger: GAAGCAGGGCAGTAATCCTCATGAGAGCGACCCCCT...GCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | TTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCTTGCTGCTGCTGCTGCTaGCCGAACTCCATGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: FADTSRSRILFSLFRRFPCCCCC*PNSMKA Trigger: CGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCA...AGGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCAGACTGGAGGCAGCGCTaGCGAGCGTGGCGACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VPISFVNATNSPSKGVKADWRQR*RAWRQG Trigger: GCCCTGTCGCCACGCTCGCCAGCGCTGCCTCCAGTC...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATGCTCTTAGAAACGTCCCAGACTaGAGGCAGCGCTGGCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGFRSAGIETSFSLTHALRNVPD*RQRWRA Trigger: CGCTCGCCAGCGCTGCCTCCAGTCTGGGACGTTTCT...AAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | GAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTCCTAAGCCTGCTGATTTGGACGAGTCCTaGCCTTCCAAGCCGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ENEPSRLLATLMSSPKPADLDES*PSKPSA Trigger: GGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATC...AGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAAATGGCCGGGGAGCTCTaGTGCGAGTGCGGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: IKQVKTLPSLCRFFWLGEMAGEL*CECGCG Trigger: GCCGCAGCCGCACTCGCAGCAGAGCTCCCCGGCCAT...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCCTCTGCATCGTGTCCTaGTGTGGAGAGGAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: RERGRENEPSRLLATLMSLCIVS*CGEEYQ Trigger: CTGGTACTCCTCTCCACACCAGGACACGATGCAGAG...GCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR CAA 72 bp | TTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTaGTTCAGACGTTTCCCTAGGGTGTTCCCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FADTSRSRILFS*FRRFPRVFPWA Trigger: TGCCCAAGGGAACACCCTAGGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| 3UTR CAA 72 bp | CTTGCCACACTTATGAGCTCTCCTAAGCCTGCTCCTTaGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: LATLMSSPKPAP*APFRRYKQVPD Trigger: ATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAAAGGGTAGTGCGCGCCTaGCATGGCCGGGGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IKQVKTLPSLCRFFWLGERVVRA*HGRGAL Trigger: CAGAGCTCCCCGGCCATGGCAGGCGCGCACTACCCT...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | AGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACAGTAAGGTCTGGGCGGCTGCGCTaGTGTTGTGGTAGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: RDSEPGSQGVRENILTVRSGRLR*CCGRTG Trigger: TCCAGTCCTACCACAACAGCAGCGCAGCCGCCCAGA...CCTTACTGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAATCGTCCCCTCGCGTCTaGGCGGCTGCGCTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IKQVKTLPSLCRFFWLGESSPRV*AAALLL Trigger: CAACAGCAGCGCAGCCGCCCAGACGCGAGGGGACGA...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATGCTCTTGTCTGCTTTCAGACTTaGTGCAGACGCCACGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: RGFRSAGIETSFSLTHALVCFQT*CRRHES Trigger: CGACTCGTGGCGTCTGCATCAAGTCTGAAAGCAGAC...AAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTATCATCTGTGGTCTCTaGATCGTGTCCTGGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: ERGRENEPSRLLATLMSSIICGL*IVSWCG Trigger: TCCACACCAGGACACGATGCAGAGACCACAGATGAT...AGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCTTCCTCCGTCTTTCCTaGTTCCAGTTCAGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPFLRLS*FQFRVW Trigger: CCAAACCCTGAACTGGAATCAGGAAAGACGGAGGAA...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCAAGAGACTCAGAGCCTaGATCCCAAGGGGTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPKRLRA*IPRGKR Trigger: TCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCTT...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATGCTCTTTTCTTGCCACACTTATaGGCTCTCCTAAGCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGFRSAGIETSFSLTHALFLPHL*ALLSLL Trigger: GAGCAGGCTTAGGAGAGCTCATAAGTGTGGCAAGAA...AAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | AGAATGGTGATTTTGATTGTTTCCTCCGTCTTTCCTGATTCCAGTTCAGGGTTTCGCCGCTCTCCCCTCTaGAGCCACCTTAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RMVILIVSSVFPDSSSGFRRSPL*SHLSSL Trigger: CAAAGAGCTAAGGTGGCTGCAGAGGGGAGAGCGGCG...AAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAATCACCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCATGCTGCTGCTGCTGCTaGTGCCCGAACTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: VPISFVNATNSPSKGVKACCCCC*CPNSMK Trigger: CTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCA...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTAAGGGGTTTCAGGAGTaGTGGCATAGAAACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ERGRENEPSRLLATLMSSKGFQE*WHRNQF Trigger: AAACTGGTTTCTATGCCAGCACTCCTGAAACCCCTT...AGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCAACTCACATCATCTGTaGTCTCTGCATCGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPNSHHL*SLHRVL Trigger: CAGGACACGATGCAGAGACCACAGATGATGTGAGTT...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | TCCTTTGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTAGATACTGTGTCTGCTaGAAGCGATGGTTTAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SFGSFSQIQAGPGSSFPCRYCVC*KRWFKA Trigger: GGCTTTAAACCATCGCTTTCAGCAGACACAGTATCT...ACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCTCTCATGAGGATTACTaGCCTGCTTCAGCAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPSHEDY*PASAVS Trigger: AGAAACTGCTGAAGCAGGGCAGTAATCCTCATGAGA...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATGCTCTTCTAAGCCTGCTCCTTTaGCTCCTTTTCGCAGATACA | + |
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Preference number: 4 (lower is better) Translates to: RGFRSAGIETSFSLTHALLSLLL*LLFADT Trigger: TGTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAG...AAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCGCAGAGATTTTAAGGTaGATTCTGCGAAAGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPAEILR*ILRKLR Trigger: GCGCAACTTTCGCAGAATCCACCTTAAAATCTCTGC...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCTGCAAGATCAATTACTaGCGTTGCTCAAGAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPCKINY*RCSREK Trigger: CTTCTCTCTTGAGCAACGTCAGTAATTGATCTTGCA...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | GAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTCTCTTTCTCTCTCTCTaGGATGCAAGATCAATTACT | + |
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Preference number: 4 (lower is better) Translates to: ERGRENEPSRLLATLMSSLFLSL*DARSIT Trigger: AGTAATTGATCTTGCATCTCAGAGAGAGAGAAAGAG...AGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR TCA 90 bp | CTTAAACTCATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: LKLIKQVKTLPSLCRFFWAARTP*RRIWTS Trigger: ACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGC...CCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAATGAGTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR GCA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCAACGCTGCCAAGTTTGTaGAGATTCTTCTGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPISFVNATNSPSKGVKATLPSL*RFFWLG Trigger: CCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGT...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAACAGTTCGGCTCTCTCTaGAAGGGCCAGATACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: IKQVKTLPSLCRFFWLGEQFGSL*KGQILC Trigger: ACACAGTATCTGGCCCTTCCAGAGAGAGCCGAACTG...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CCA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAACATCGTGTCCTGGTGTaGAGAGGAGTACCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKQVKTLPSLCRFFWLGEHRVLV*RGVPVR Trigger: TCTCACTGGTACTCCTCTCCACACCAGGACACGATG...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CCA 90 bp | AGAATGGTGATTTTGATTGTTTCCTCCGTCTTTCCTGATTCCAGTTCAGGGTTTAAAAACTTTGGGGGCTaGAGAAAGCCTTCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RMVILIVSSVFPDSSSGFKNFGG*RKPSPG Trigger: CCCGGGAGAAGGCTTTCTCCAGCCCCCAAAGTTTTT...AAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAATCACCATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCTCACACATGCTCTTTTGTGCAGATTCTTCTaGTTGGGGGAAAATCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFRSAGIETSFSLTHALLCRFF*LGENLF Trigger: AAACAGATTTTCCCCCAACCAGAAGAATCTGCACAA...AAGAGCATGTGTGAGAGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACATCCCTATTAGCTTTGTaGATGCCACCAATTCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRRDSEPGSQGVRENILTSLLAL*MPPIHL Trigger: TAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGA...TGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCTTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | CGCCGCCGCCGCCGAGTGCAGGCAGTGCAGAGGGTAGTGCGCGCCTaGCATGGCCGGGGAGCTCTGCTGCGAGTGCGGCTGCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRVQAVQRVVRA*HGRGALLRVRLRRR Trigger: CCGCCGCCGCAGCCGCACTCGCAGCAGAGCTCCCCGGCCATGGCAGGCGCGCACTACCCTCTGCACTGCCTGCACTCGGCGGCGGCGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | ACTCGTCGAACGAAGCCTGCGCCGGGCCCGGGACTCAGCCCGAACTaGGCGTCGGAAGCTGAGGGTCCGCGGCGGCGGGAAGGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRRTKPAPGPGLSPN*ASEAEGPRRREGAR Trigger: CCGGGCCCCTTCCCGCCGCCGCGGACCCTCAGCTTCCGACGCGCAGTTCGGGCTGAGTCCCGGGCCCGGCGCAGGCTTCGTTCGACGAGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS CCA 90 bp | CAAACAGCCCGCTTTGCCGCAGCGGAGGCGGTGCCGGAGGCTCTCTaGGGTGCGCAGCGCAGCAAGGCGGCAGCTGTCCGGGCGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QTARFAAAEAVPEAL*GAQRSKAAAVRAER Trigger: CCGCTCCGCCCGGACAGCTGCCGCCTTGCTGCGCTGCGCACCCCAGAGAGCCTCCGGCACCGCCTCCGCTGCGGCAAAGCGGGCTGTTTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS CCA 90 bp | GACACCCTTGGCCGAGGCAGAAACGTCCCAGACTGGAGGCAGCGCTaGCGAGCGTGGCGACAGGGCCGCCGAGCCCTGGAGGGGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTLGRGRNVPDWRQR*RAWRQGRRALEGVA Trigger: AGCGACCCCCTCCAGGGCTCGGCGGCCCTGTCGCCACGCTCGCCAGCGCTGCCTCCAGTCTGGGACGTTTCTGCCTCGGCCAAGGGTGTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000493273.2 ENST00000518156.3 ENST00000555308.1 |
||
| CDS GCA 90 bp | GGCGGCGGCGGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGCTGCTGCCCGAACTCCATGAAGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGGGCCCCCCCCCCC*CCCCCCCPNSMKAD Trigger: ATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCCGCCGCCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS CCA 90 bp | GCAAGGAAAAGGGCGCACAGACCCAGGAGGCTGGAGAGCGCAGTGTaGACTAACTCGTCGAACGAAGCCTGCGCCGGGCCCGGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARKRAHRPRRLESAV*TNSSNEACAGPGTQ Trigger: CTGAGTCCCGGGCCCGGCGCAGGCTTCGTTCGACGAGTTAGTCCACACTGCGCTCTCCAGCCTCCTGGGTCTGTGCGCCCTTTTCCTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS GCA 90 bp | GCCCCGACCTCTCTTGGTCCACTCTGCCCGTGTGCTCCCAGCGTCTaGGTAATCTCCTTGACCCAGTCCCTGGCCCGAACAATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APTSLGPLCPCAPSV*VISLTQSLARTMCS Trigger: GCTGCACATTGTTCGGGCCAGGGACTGGGTCAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAGAGAGGTCGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS GCA 90 bp | GGCGGCGGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGCTGCCCGAACTCCATGAAGGCGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGGCCCCCCCCCCCC*CCCCCCPNSMKADL Trigger: CAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCCGCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS CCA 90 bp | CCGGCCCAGAAATGTCCCCAGCCGGGTCAAACGTGGGTTACAGCCTaGAGGGAAGGAGCAAGGAAAAGGGCGCACAGACCCAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAQKCPQPGQTWVTA*REGARKRAHRPRRL Trigger: CAGCCTCCTGGGTCTGTGCGCCCTTTTCCTTGCTCCTTCCCTCCAGGCTGTAACCCACGTTTGACCCGGCTGGGGACATTTCTGGGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS TCA 90 bp | GCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGTCCTGGCCTTCCAAGCCGTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAVAAAAAAAARTP*RRIWTSPGLPSRQP Trigger: TGGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTaGCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*PNSMKADLDESWPS Trigger: GGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS CCA 90 bp | GAGGAGCGGTCACCCGGGAGGCTACTGCTGCCATCTCCCTGCTCCTaGCGTGGCATGCAACGAGTCTCCCCAAAGCCCAATAAGGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: EERSPGRLLLPSPCS*RGMQRVSPKPNKGY Trigger: GTAACCCTTATTGGGCTTTGGGGAGACTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGACCGCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555308.1 |
||
| CDS GCA 90 bp | AGCGTCTGCGTAATCTCCTTGACCCAGTCCCTGGCCCGAACAATGTaGAGCGTCTGGGCCAAGGGAGCGCCAGAGGCCCTCAGACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: SVCVISLTQSLARTM*SVWAKGAPEALRQT Trigger: TGTTTGTCTGAGGGCCTCTGGCGCTCCCTTGGCCCAGACGCTGCACATTGTTCGGGCCAGGGACTGGGTCAAGGAGATTACGCAGACGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS GCA 90 bp | TGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTaGTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CPNSMKADLDESWP Trigger: AGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | GGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCCCCCCCCCCCCC*CCCCPNSMKADLDE Trigger: CTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | TGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCPNSMKADLDES Trigger: GGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | AATACAGAGGAGCGGTCACCCGGGAGGCTACTGCTGCCATCTCCCTaGTCCTGGCGTGGCATGCAACGAGTCTCCCCAAAGCCCAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTEERSPGRLLLPSP*SWRGMQRVSPKPNK Trigger: CTTATTGGGCTTTGGGGAGACTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGACCGCTCCTCTGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555308.1 |
||
| CDS-3UTR CAA 90 bp | TCCTTTGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCCACCCTCCCCCACTaGGCTCGCGCCGCTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFGSFSQIQAGPGSSFPCSTLPH*ARAALP Trigger: GGGGAGAGCGGCGCGAGCCAAGTGGGGGAGGGTGGA...ACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCAAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS GCA 90 bp | ACCTCGAAAAATCCCTATGATGCCCCGACCTCTCTTGGTCCACTCTaGCCGTGTGCTCCCAGCGTCTGCGTAATCTCCTTGACCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSKNPYDAPTSLGPL*PCAPSVCVISLTQS Trigger: GGACTGGGTCAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAGAGAGGTCGGGGCATCATAGGGATTTTTCGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555308.1 |
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| CDS GCA 90 bp | TGTAAGCAAATAATACAGAGGAGCGGTCACCCGGGAGGCTACTGCTaGCATCTCCCTGCTCCTGGCGTGGCATGCAACGAGTCTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CKQIIQRSGHPGGYC*HLPAPGVACNESPQ Trigger: TTGGGGAGACTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGACCGCTCCTCTGTATTATTTGCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555308.1 |
||
| CDS GCA 90 bp | ATCTCGAAAAATCCCTATGATGCCCCGACCTCTCTTGGTCCACTCTaGCCGTGTGCTCCCAGCGTCTGCGTAATCTCCTTGACCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISKNPYDAPTSLGPL*PCAPSVCVISLTQS Trigger: GGACTGGGTCAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAGAGAGGTCGGGGCATCATAGGGATTTTTCGAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS TCA 90 bp | GAAGCTGTGCTTGAGCCACCCAGGTGTTTACGCGGCCAGTTGACTTaGTGTCACCAGCTCCAAGCTCAGTGCATCAAGCATCCTCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EAVLEPPRCLRGQLT*CHQLQAQCIKHPRH Trigger: ATGCCGAGGATGCTTGATGCACTGAGCTTGGAGCTGGTGACATCAAGTCAACTGGCCGCGTAAACACCTGGGTGGCTCAAGCACAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS GCA 90 bp | ACTTTGTCCCCCTCGGGTGCTGAGAACCATCAGCCCGAGGTTCTTTaGTTCCCCTCCACGAACAAAGGAGCAGCCAACACTGTAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLSPSGAENHQPEVL*FPSTNKGAANTVAK Trigger: TTTCGCTACAGTGTTGGCTGCTCCTTTGTTCGTGGAGGGGAAGCAAAGAACCTCGGGCTGATGGTTCTCAGCACCCGAGGGGGACAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS CCA 90 bp | TGCTGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTaGCCTTCCAAGCCGTCAGCCATCGTAGTCATGGTCATCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCPNSMKADLDES*PSKPSAIVVMVIIK Trigger: TTTGATGATGACCATGACTACGATGGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGGAGAGAGAATGAGCCTAGTCGGCTTCTTGCCACACTTATGAGCTCTGGCATACTGACACCCTaGGCCGAGGCAGAAACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERGRENEPSRLLATLMSSGILTP*AEAETS Trigger: GGACGTTTCTGCCTCGGCCAAGGGTGTCAGTATGCC...AGAGCTCATAAGTGTGGCAAGAAGCCGACTAGGCTCATTCTCTCTCCCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS TCA 90 bp | TACCTGAAGCTGTGCTTGAGCCACCCAGGTGTTTACGCGGCCAGTTaGCTTGATGTCACCAGCTCCAAGCTCAGTGCATCAAGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLKLCLSHPGVYAAS*LDVTSSKLSASSIL Trigger: GAGGATGCTTGATGCACTGAGCTTGGAGCTGGTGACATCAAGTCAACTGGCCGCGTAAACACCTGGGTGGCTCAAGCACAGCTTCAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS CCA 90 bp | TTGGGCAACTCACATCATCTGTGGTCTCTGCATCGTGTCCTGGTGTaGAGAGGAGTACCAGTGAGAATAGCCAGGCATGTAGCTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNSHHLWSLHRVLV*RGVPVRIARHVAVG Trigger: CCCAACAGCTACATGCCTGGCTATTCTCACTGGTACTCCTCTCCACACCAGGACACGATGCAGAGACCACAGATGATGTGAGTTGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493273.2 ENST00000518156.3 |
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| CDS-3UTR CAA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCATAGTGAGCGGGGCCTaGTTAACTCAAAGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPIVSGA*LTQREE Trigger: CTCCTCCCTTTGAGTTAACAAGGCCCCGCTCACTAT...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS TCA 90 bp | GTCACCAGCTCCAAGCTCAGTGCATCAAGCATCCTCGGCATGTTTTaGAATGACTCTCCTGAGGAGGACCAAATCCTCAAACAAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: VTSSKLSASSILGMF*NDSPEEDQILKQNT Trigger: TGTGTTTTGTTTGAGGATTTGGTCCTCCTCAGGAGAGTCATTTCAAAACATGCCGAGGATGCTTGATGCACTGAGCTTGGAGCTGGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS-3UTR CAA 90 bp | AATATCCTTACAGTAAGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTCGTCTGCTTTCAGACTaGATGCAGACGCCACGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NILTVRGFRSAGIETSFSRLLSD*MQTPRV Trigger: GACTCGTGGCGTCTGCATCAAGTCTGAAAGCAGACG...AGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCTTACTGTAAGGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACAGTAAGGTGGATTCTGCGAAAGTaGCGCGTCTGCTTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RDSEPGSQGVRENILTVRWILRK*RVCFQT Trigger: AGTCTGAAAGCAGACGCGCAACTTTCGCAGAATCCA...CCTTACTGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | AGAATGGTGATTTTGATTGTTTCCTCCGTCTTTCCTGATTCCAGTTCAGGGTTTTCCATGAAGGCGGATTaGGACGAGTCCTGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMVILIVSSVFPDSSSGFSMKAD*DESWPS Trigger: GGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGA...AAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAATCACCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCACCTAAGCCTGCTCCTTaGGCTCCTTTTCGCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: VPISFVNATNSPSKGVKAPKPAP*APFRRY Trigger: GTATCTGCGAAAAGGAGCCAAAGGAGCAGGCTTAGG...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | ATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGTTGGGGGAACGGATCCTCTTTTCCTaGTTCAGACGTTTCCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKQVKTLPSLCRFFWLGERILFS*FRRFPR Trigger: CCTAGGGAAACGTCTGAACAAGGAAAAGAGGATCCG...TTCCCCCAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | TTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTTGTTCAGACGTTTCCCCATCATTCCTGGTCATaGCATTTTGATAAAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: FRRYKQVPDPLFLVQTFPHHSWS*HFDKTC Trigger: GCATGTTTTATCAAAATGCAATGACCAGGAATGATG...GGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | AATATCCTTACAGTAAGGGGTTTCAGGAGTGCTGGCATAGAAACCAGTTTCTCTTCATCATCAAAAACTTaGGGGGCTGGAGAAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NILTVRGFRSAGIETSFSSSSKT*GAGESL Trigger: AAGGCTTTCTCCAGCCCCCAAAGTTTTTGATGATGA...AGAGAAACTGGTTTCTATGCCAGCACTCCTGAAACCCCTTACTGTAAGGATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAGAGACTCAGAGCCTGGATCCCAAGGGGTAAGAGAAAATATCCTTACAAATCACTGTAGTTTTTaGTTGATCTGTGTCGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRRDSEPGSQGVRENILTNHCSF*LICVVP Trigger: GGGGACGACACAGATCAACAAAAAACTACAGTGATT...TGTAAGGATATTTTCTCTTACCCCTTGGGATCCAGGCTCTGAGTCTCTTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | GTCCCTATTAGCTTTGTGAATGCCACCAATTCACCTAGTAAAGGTGTCAAAGCAAAAACGCTGCCAAGTTaGTGCAGATTCTTCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPISFVNATNSPSKGVKAKTLPS*CRFFWL Trigger: CAACCAGAAGAATCTGCACAAACTTGGCAGCGTTTT...TGCTTTGACACCTTTACTAGGTGAATTGGTGGCATTCACAAAGCTAATAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | AGAATGGTGATTTTGATTGTTTCCTCCGTCTTTCCTGATTCCAGTTCAGGGTTTCCTGGTCATTGCATTTaGATAAAACATGCAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RMVILIVSSVFPDSSSGFPGHCI*IKHAAF Trigger: GAATGCTGCATGTTTTATCAAAATGCAATGACCAGG...AAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAATCACCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAACTCATTAAACAAGTAAAAACGCTGCCAAGTTTGTGCAGATTCTTCTGGGATCAATTACTGACGTaGCTCAAGAGAGAAGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKLIKQVKTLPSLCRFFWDQLLT*LKREGK Trigger: TTTACCTTCTCTCTTGAGCAACGTCAGTAATTGATC...CCAGAAGAATCTGCACAAACTTGGCAGCGTTTTTACTTGTTTAATGAGTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS CCA 72 bp | CGCTTTGCCGCAGCGGAGGCGGTGCCGGAGGCTCTCTaGGGTGCGCAGCGCAGCAAGGCGGCAGCTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RFAAAEAVPEAL*GAQRSKAAAVR Trigger: CCGGACAGCTGCCGCCTTGCTGCGCTGCGCACCCCAGAGAGCCTCCGGCACCGCCTCCGCTGCGGCAAAGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
||
| CDS CCA 72 bp | GGCCGAGGCAGAAACGTCCCAGACTGGAGGCAGCGCTaGCGAGCGTGGCGACAGGGCCGCCGAGCCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRNVPDWRQR*RAWRQGRRALE Trigger: CTCCAGGGCTCGGCGGCCCTGTCGCCACGCTCGCCAGCGCTGCCTCCAGTCTGGGACGTTTCTGCCTCGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000493273.2 ENST00000518156.3 ENST00000555308.1 |
||
| CDS GCA 72 bp | CGCCGAGTGCAGGCAGTGCAGAGGGTAGTGCGCGCCTaGCATGGCCGGGGAGCTCTGCTGCGAGTGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRVQAVQRVVRA*HGRGALLRVRL Trigger: CAGCCGCACTCGCAGCAGAGCTCCCCGGCCATGGCAGGCGCGCACTACCCTCTGCACTGCCTGCACTCGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
||
| CDS CCA 72 bp | AGAAACGTCCCAGACTGGAGGCAGCGCTGGCGAGCGTaGCGACAGGGCCGCCGAGCCCTGGAGGGGGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: RNVPDWRQRWRA*RQGRRALEGVA Trigger: AGCGACCCCCTCCAGGGCTCGGCGGCCCTGTCGCCACGCTCGCCAGCGCTGCCTCCAGTCTGGGACGTTTCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000493273.2 ENST00000518156.3 ENST00000555308.1 |
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| CDS CCA 72 bp | AGTGCAGGCAGTGCAGAGGGTAGTGCGCGCCTGCCATaGCCGGGGAGCTCTGCTGCGAGTGCGGCTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SAGSAEGSARLP*PGSSAASAAAA Trigger: CGCCGCAGCCGCACTCGCAGCAGAGCTCCCCGGCCATGGCAGGCGCGCACTACCCTCTGCACTGCCTGCACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | GAGAGCGCAGTGTGGACTAACTCGTCGAACGAAGCCTaGGCCGGGCCCGGGACTCAGCCCGAACTGCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: ESAVWTNSSNEA*AGPGTQPELRV Trigger: GACGCGCAGTTCGGGCTGAGTCCCGGGCCCGGCGCAGGCTTCGTTCGACGAGTTAGTCCACACTGCGCTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS CAA 72 bp | CCAGCCCACGAGCAGGCTGCGCCTCTCACGGCAACTTaGTCCCCCTCGGGTGCTGAGAACCATCAGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PAHEQAAPLTAT*SPSGAENHQPE Trigger: CTCGGGCTGATGGTTCTCAGCACCCGAGGGGGACAAAGTTGCCGTGAGAGGCGCAGCCTGCTCGTGGGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS GCA 72 bp | GAGCGGTCACCCGGGAGGCTACTGCTGCCATCTCCCTaGTCCTGGCGTGGCATGCAACGAGTCTCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ERSPGRLLLPSP*SWRGMQRVSPK Trigger: CTTTGGGGAGACTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGACCGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555308.1 |
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| CDS CCA 72 bp | CCACGCAAAGTAGGCCACTGCCTGCCCAGCGTGGGCTaGGAAGCAAAACACGCTCCCCAGTTCCGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PRKVGHCLPSVG*EAKHAPQFRPR Trigger: TCTGGGCCGGAACTGGGGAGCGTGTTTTGCTTCCCAGCCCACGCTGGGCAGGCAGTGGCCTACTTTGCGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS CAA 72 bp | AAAGCCTTCTCCCGGGTTTCCTCCACCCTCCCCCACTaGGCTCGCGCCGCTCTCCCCTCTGCAGCCACCTTA | + |
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Preference number: 6 (lower is better) Translates to: KAFSRVSSTLPH*ARAALPSAATL Trigger: TAAGGTGGCTGCAGAGGGGAGAGCGGCGCGAGCCAAGTGGGGGAGGGTGGAGGAAACCCGGGAGAAGGCTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | GTAATCTCCTTGACCCAGTCCCTGGCCCGAACAATGTaGAGCGTCTGGGCCAAGGGAGCGCCAGAGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VISLTQSLARTM*SVWAKGAPEAL Trigger: GAGGGCCTCTGGCGCTCCCTTGGCCCAGACGCTGCACATTGTTCGGGCCAGGGACTGGGTCAAGGAGATTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS GCA 72 bp | GATCTGTGTCGTCCCCTCGCGTCTGGGCGGCTGCGCTaGTGTTGTGGTAGGACTGGAGGTAAGGGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DLCRPLASGRLR*CCGRTGGKGCA Trigger: AGCACAGCCCTTACCTCCAGTCCTACCACAACAGCAGCGCAGCCGCCCAGACGCGAGGGGACGACACAGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS CAA 90 bp | CAGCTCAGACCAGCCCACGAGCAGGCTGCGCCTCTCACGGCAACTTaGTCCCCCTCGGGTGCTGAGAACCATCAGCCCGAGGTTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: QLRPAHEQAAPLTAT*SPSGAENHQPEVLC Trigger: GCAAAGAACCTCGGGCTGATGGTTCTCAGCACCCGAGGGGGACAAAGTTGCCGTGAGAGGCGCAGCCTGCTCGTGGGCTGGTCTGAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS CAA 90 bp | CTTGGTCCACTCTGCCCGTGTGCTCCCAGCGTCTGCGTAATCTCCTaGACCCAGTCCCTGGCCCGAACAATGTGCAGCGTCTGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LGPLCPCAPSVCVIS*TQSLARTMCSVWAK Trigger: CTTGGCCCAGACGCTGCACATTGTTCGGGCCAGGGACTGGGTCAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS GCA 72 bp | TGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCTGCTGCCCGAACTCCATGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*CCCCCPNSMKA Trigger: CGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS CCA 72 bp | TCACCCGGGAGGCTACTGCTGCCATCTCCCTGCTCCTaGCGTGGCATGCAACGAGTCTCCCCAAAGCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SPGRLLLPSPCS*RGMQRVSPKPN Trigger: ATTGGGCTTTGGGGAGACTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555308.1 |
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| CDS TCA 72 bp | GTTGCTGCTGCTGCTGCTGCTGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGTCCTGGCCTTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VAAAAAAAARTP*RRIWTSPGLPS Trigger: GCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | TCTCTTGGTCCACTCTGCCCGTGTGCTCCCAGCGTCTaGGTAATCTCCTTGACCCAGTCCCTGGCCCGAACA | + |
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Preference number: 6 (lower is better) Translates to: SLGPLCPCAPSV*VISLTQSLART Trigger: TGTTCGGGCCAGGGACTGGGTCAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493273.2 ENST00000555308.1 |
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| CDS GCA 72 bp | TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTaGCCGAACTCCATGAAGGCGGATTTGGACGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*PNSMKADLDES Trigger: GGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | TGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGCTGCCCGAACTCCATGAAGGCGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*CCCPNSMKADL Trigger: CAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | TGTTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGCTGCCCGAACTCCATGAAGGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*CCCCPNSMKAD Trigger: ATCCGCCTTCATGGAGTTCGGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518156.3 |
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| CDS GCA 72 bp | ATAATACAGAGGAGCGGTCACCCGGGAGGCTACTGCTaGCATCTCCCTGCTCCTGGCGTGGCATGCAACGAG | + |
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Preference number: 6 (lower is better) Translates to: IIQRSGHPGGYC*HLPAPGVACNE Trigger: CTCGTTGCATGCCACGCCAGGAGCAGGGAGATGGCAGCAGTAGCCTCCCGGGTGACCGCTCCTCTGTATTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555308.1 |
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| CDS CCA 72 bp | AAATGTCCCCAGCCGGGTCAAACGTGGGTTACAGCCTaGAGGGAAGGAGCAAGGAAAAGGGCGCACAGACCC | + |
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Preference number: 6 (lower is better) Translates to: KCPQPGQTWVTA*REGARKRAHRP Trigger: GGGTCTGTGCGCCCTTTTCCTTGCTCCTTCCCTCCAGGCTGTAACCCACGTTTGACCCGGCTGGGGACATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS GCA 72 bp | CCCTCGGGTGCTGAGAACCATCAGCCCGAGGTTCTTTaGTTCCCCTCCACGAACAAAGGAGCAGCCAACACT | + |
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Preference number: 6 (lower is better) Translates to: PSGAENHQPEVL*FPSTNKGAANT Trigger: AGTGTTGGCTGCTCCTTTGTTCGTGGAGGGGAAGCAAAGAACCTCGGGCTGATGGTTCTCAGCACCCGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS GCA 72 bp | AATCCCTATGATGCCCCGACCTCTCTTGGTCCACTCTaGCCGTGTGCTCCCAGCGTCTGCGTAATCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NPYDAPTSLGPL*PCAPSVCVISL Trigger: CAAGGAGATTACGCAGACGCTGGGAGCACACGGGCAGAGTGGACCAAGAGAGGTCGGGGCATCATAGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000493273.2 ENST00000555308.1 |
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| CDS TCA 72 bp | CTGTGCTTGAGCCACCCAGGTGTTTACGCGGCCAGTTaGCTTGATGTCACCAGCTCCAAGCTCAGTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LCLSHPGVYAAS*LDVTSSKLSAS Trigger: TGATGCACTGAGCTTGGAGCTGGTGACATCAAGTCAACTGGCCGCGTAAACACCTGGGTGGCTCAAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS TCA 72 bp | CTTGAGCCACCCAGGTGTTTACGCGGCCAGTTGACTTaGTGTCACCAGCTCCAAGCTCAGTGCATCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LEPPRCLRGQLT*CHQLQAQCIKH Trigger: ATGCTTGATGCACTGAGCTTGGAGCTGGTGACATCAAGTCAACTGGCCGCGTAAACACCTGGGTGGCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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| CDS CAA 90 bp | TGGCTCCTTTTCGCAGATACAAGCAGGTCCCGGATCCTCTTTTCCTaGTTCAGACGTTTCCCTAGGGTGTTCCCTTGGGCAACTCACATC | + |
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Preference number: 6 (lower is better) Translates to: WLLFADTSRSRILFS*FRRFPRVFPWATHI Trigger: GATGTGAGTTGCCCAAGGGAACACCCTAGGGAAACGTCTGAACAAGGAAAAGAGGATCCGGGACCTGCTTGTATCTGCGAAAAGGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000493273.2 ENST00000518156.3 |
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| CDS CCA 72 bp | TCACATCATCTGTGGTCTCTGCATCGTGTCCTGGTGTaGAGAGGAGTACCAGTGAGAATAGCCAGGCATGTA | + |
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Preference number: 6 (lower is better) Translates to: SHHLWSLHRVLV*RGVPVRIARHV Trigger: TACATGCCTGGCTATTCTCACTGGTACTCCTCTCCACACCAGGACACGATGCAGAGACCACAGATGATGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000493273.2 ENST00000518156.3 ENST00000555308.1 |
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| CDS TCA 72 bp | TCCAAGCTCAGTGCATCAAGCATCCTCGGCATGTTTTaGAATGACTCTCCTGAGGAGGACCAAATCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SKLSASSILGMF*NDSPEEDQILK Trigger: TTTGAGGATTTGGTCCTCCTCAGGAGAGTCATTTCAAAACATGCCGAGGATGCTTGATGCACTGAGCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493273.2 |
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