RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DLL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198719

Ensembl transcript IDs: ENST00000366756.4, ENST00000616526.2, ENST00000630365.1, ENST00000630500.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTaGACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: LSAGVEDLRRRTCSV*TRFLSSSPRGLPPL
Trigger: AAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR CCA 90 bp TCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTaGGGCATATATCCTTGGAATTTTACTTATTTTAAGAGAAACGGG +
Preference number: 1 (lower is better)
Translates to: SAAVHEASLLFSSIR*GIYPWNFTYFKRNG
Trigger: CCCGTTTCTCTTAAAATAAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR CCA 90 bp AAGGACAATAAAGGCAGTGTTTGTGTTTCTAATTCAAGAAAAGACTaGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTC +
Preference number: 1 (lower is better)
Translates to: KDNKGSVCVSNSRKD*LIRIQNIHSGSACF
Trigger: GAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAGTCTTTTCTTGAATTAGAAACACAAACACTGCCTTTATTGTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR-3UTR CCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCTTCAGCAGCATTCGTTaGGGCATATATCCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVFSSIR*GIYPWN
Trigger: ATTCCAAGGATATATGCCCCAACGAATGCTGCTGAA...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR-3UTR CCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGTTCAGCAGCATTCGTTaGGGCATATATCCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRFSSIR*GIYPWN
Trigger: ATTCCAAGGATATATGCCCCAACGAATGCTGCTGAA...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR-3UTR TCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAGAACCTGCTCGGTCTaGACTCGGTTTCTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRRTCSV*TRFLSS
Trigger: GCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCT...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR TCA 72 bp GGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTaGACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTC +
Preference number: 3 (lower is better)
Translates to: GVEDLRRRTCSV*TRFLSSSPRGL
Trigger: GAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR CCA 72 bp GTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTaGGGCATATATCCTTGGAATTTTACTTATTTTAAG +
Preference number: 3 (lower is better)
Translates to: VHEASLLFSSIR*GIYPWNFTYFK
Trigger: CTTAAAATAAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
3UTR GCA 72 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTaGATGCTTCTTATGCGTAATTCAGTTCACCCATTT +
Preference number: 3 (lower is better)
Translates to: LAHKNPKYTLRQ*MLLMRNSVHPF
Trigger: AAATGGGTGAACTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCCCGGCAGGGGTCGGCTaGGGGCCGGTGCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVPAGVG*GPVLLQ
Trigger: CTGCAGAAGCACCGGCCCCCAGCCGACCCCTGCCGG...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTGCGCGCAGAGGATCTaGCTCTCGCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVCAQRI*LSPAPA
Trigger: GGCAGGCGCCGGCGAGAGCCAGATCCTCTGCGCGCA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCGCACCGACTGCCCATaGTGCTTCGCTCCACGCGCG +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQRTDCP*CFAPRA
Trigger: CGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGTGCG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGATCGCCCACCGTCAGGTaGCTCTGGGTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRSPTVR*LWVARR
Trigger: CCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGA...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGGTGCGGCCGCTGCTGTaGAGGTCCTGGGACCACTCC +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRVRPLL*RSWDHS
Trigger: GGAGTGGTCCCAGGACCTGCACAGCAGCGGCCGCAC...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCCTGCTGTGCAGGTCCTaGGACCACTCCTCGCCCACC +
Preference number: 4 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVLLCRS*DHSSPT
Trigger: GGTGGGCGAGGAGTGGTCCCAGGACCTGCACAGCAG...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCCGGTGGCCCCTCTCGTaGCAGGTGGCCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVRWPLS*QVAPLW
Trigger: CCACAATGGGGCCACCTGCCACGAGAGGGGCCACCG...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGAGCGGTAGGAGTACTTaGGGTCCGTGCGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQSGRST*GPCGRC
Trigger: GCAGCGGCCGCACGGACCTCAAGTACTCCTACCGCT...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAGTGCGGCCGCTGCTGTaGAGGTCCTGGGACCACTCC +
Preference number: 4 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRVRPLL*RSWDHS
Trigger: GGAGTGGTCCCAGGACCTGCACAGCAGCGGCCGCAC...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCACGTTGTCGTCACAGTaGCTCCCCGAGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVTLSSQ*LPEKPA
Trigger: GGCCGGCTTCTCGGGGAGGCACTGTGACGACAACGT...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTCCCCAGCTCGCAGGTaGCACCTGTGTACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVSPARR*HLCTQA
Trigger: GGCCTGGGTACACAGGTGCCACCTGCGAGCTGGGGA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCACGCTCCCCACAGGTaGAGTGGCCGAAGGCATCGT +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQHAPHR*SGRRHR
Trigger: ACGATGCCTTCGGCCACTTCACCTGTGGGGAGCGTG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCTCCATCGGGGCTGTCTaGGCACCGACCCCCGTTAAA +
Preference number: 4 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVSIGAV*APTPVK
Trigger: TTTAACGGGGGTCGGTGCTCAGACAGCCCCGATGGA...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCCTCCACGCGCGAGCCTaGGGGGCCCCCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLLHARA*GAPTSL
Trigger: GAGAGAAGTGGGGGCCCCCCAGGCTCGCGCGTGGAG...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGGGAATGGCCCGCCCTaGCCCTCTAGCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQGNGPP*PSSFSV
Trigger: CACTGAGAAGCTAGAGGGCCAGGGCGGGCCATTCCC...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCAGGTGCCCGGCCAGGTaGAGCCGAAGGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLRCPAR*SRRGSG
Trigger: TCCGCTTCCCCTTCGGCTTCACCTGGCCGGGCACCT...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTCCATCGGGGCTGTCTaGGCACCGACCCCCGTTAAA +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVSIGAV*APTPVK
Trigger: TTTAACGGGGGTCGGTGCTCAGACAGCCCCGATGGA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTGCTGTGCGCGTCCCTaGCGGCGGTGTCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARCCARP*RRCRHP
Trigger: AGGGTGACGACACCGCCGTCAGGGACGCGCACAGCA...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGATCGGCTCTGTaGAGTAGGGCCCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVGRSAL*SRALSS
Trigger: GCTGGAAAGGGCCCTACTGCACAGAGCCGATCTGCC...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTCCCCTGGCCCGTGTTaGTGCAGGTGGCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVSPGPC*CRWLHS
Trigger: AGAATGGAGCCACCTGCACCAACACGGGCCAGGGGA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGCGCTGTGGTCCCCGTaGAAGTCCGCCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVALWSP*KSAFLL
Trigger: CAACAAGAAGGCGGACTTCCACGGGGACCACAGCGC...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACCAGCCCCCGAGGAGGTaGGGGTCGCCGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNQPPRR*GSPASW
Trigger: CCAGGAAGCCGGCGACCCTCACCTCCTCGGGGGCTG...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGAGCGGTAGGAGTACTTaGGGTCCGTGCGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARSGRST*GPCGRC
Trigger: GCAGCGGCCGCACGGACCTCAAGTACTCCTACCGCT...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCGGTGTCGTCACCCTTaGGGTCCTGCACGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQRCRHP*GPARGY
Trigger: ATAACCTCGTGCAGGACCTCAAGGGTGACGACACCG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCTTGTGGCAGGGTGCGTaGTCGCACCTGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLLWQGA*SHLLTG
Trigger: CCCCGTCAGCAGGTGCGAGCACGCACCCTGCCACAA...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGACCGTCAGGTGCCTCTaGGTGGCCAGGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARTVRCL*VARRLM
Trigger: CATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGT...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCCAGGTGGCCCCATTGTaGCAGGGTGCGTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLQVAPL*QGACSH
Trigger: GTGCGAGCACGCACCCTGCCACAATGGGGCCACCTG...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACGGTCCGTGCGGCCGCTaGTGTGCAGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNGPCGR*CAGPGT
Trigger: GGTCCCAGGACCTGCACAGCAGCGGCCGCACGGACC...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCTTTCCAGCCAGGGTTaGACACTTTCTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQLSSQG*TLSPHA
Trigger: AGCGTGGGGAGAAAGTGTGCAACCCTGGCTGGAAAG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGAGCCAGGCGGGCAGGTaGAGGAGAAGTCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARSQAGR*RRSRSR
Trigger: GCGTGAACGACTTCTCCTGCACCTGCCCGCCTGGCT...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCAGCCGGCCGCCCGCATaGCTAATGAGATGCAAATCA +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVSRPPA*LMRCKS
Trigger: TGATTTGCATCTCATTAGCCATGCGGGCGGCCGGCT...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR CCA 90 bp CACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCATGTCCTTCTCACGCTaGCAGTTGGCCAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HGRQCRRRPGRDRLSAGVMSFSR*QLARLF
Trigger: GAACAACCTGGCCAACTGCCAGCGTGAGAAGGACAT...GACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCTTCTTGTCGGCGCTGTaGTCCCCGTGGAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLFLSAL*SPWKSA
Trigger: GGCGGACTTCCACGGGGACCACAGCGCCGACAAGAA...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGAGGAGCCCTGGGGCTaGCACTTGGTGTCACGCTTG +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLEEPWG*HLVSRL
Trigger: CAAGCGTGACACCAAGTGCCAGCCCCAGGGCTCCTC...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCCTTCTCCTCGGATATaGCGTACACCGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRPSPRI*RTPTGT
Trigger: AGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGG...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAAGAACCTGCTCGGTCTaGACTCGGTTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRRTCSV*TRFLSS
Trigger: GCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCT...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAGCCATGGAGACAGCCTaGATAGCGGATACACTCGTC +
Preference number: 4 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRAMETA*IADTLV
Trigger: GACGAGTGTATCCGCTATCCAGGCTGTCTCCATGGC...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCGTTCTTACAAGGGCTaGGGTCACACTCGTCAATCC +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQRSYKG*GHTRQS
Trigger: GGATTGACGAGTGTGACCCCAGCCCTTGTAAGAACG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGGCCGTAGAAGCCGGGTaGGCAGGTACAGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARAVEAG*AGTGVA
Trigger: AGCTACTCCTGTACCTGCCCACCCGGCTTCTACGGC...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGATGTCCTTCTCACGCTaGCAGTTGGCCAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRMSFSR*QLARLF
Trigger: GAACAACCTGGCCAACTGCCAGCGTGAGAAGGACAT...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGTTCCTGGTTTTGTCTTaGGCTTCTTCGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRFLVLS*ASSQER
Trigger: CCTCTCCTGCGAAGAAGCTCAAGACAAAACCAGGAA...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR TCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATCAGCCCCCGAGGAGGTaGGGGTCGCCGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYQPPRR*GSPASW
Trigger: CCAGGAAGCCGGCGACCCTCACCTCCTCGGGGGCTG...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGCGTGCTCGCACCTGCTaGCGGGGGCACTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQARARTC*RGHCSS
Trigger: GGAACTGCAGTGCCCCCGTCAGCAGGTGCGAGCACG...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGCGGTGTCGTCACCCTTaGGGTCCTGCACGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARRCRHP*GPARGY
Trigger: ATAACCTCGTGCAGGACCTCAAGGGTGACGACACCG...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATGGTTCCCCTGCGCTCTaGCCTCGGCCGGGTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYGSPAL*PRPGRV
Trigger: GACCCGACCCGGCCGAGGGCAGAGCGCAGGGGAACC...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACGCAGAAAAGCGCCCTTaGCTCGCCCCAGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNAEKRP*LAPDRR
Trigger: CCTGCGGTCTGGGGCGAGGCAAGGGCGCTTTTCTGC...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGCGGCGCTGCCGTAGGTaGAGGGCGGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGRRCRR*RAARGT
Trigger: TGTCCCCCGAGCCGCCCTGCACCTACGGCAGCGCCG...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATCGGCGCTGCCGTAGGTaGAGGGCGGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYRRCRR*RAARGT
Trigger: TGTCCCCCGAGCCGCCCTGCACCTACGGCAGCGCCG...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCTCGCCCACCGTCAGGTaGCTCTGGGTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGSPTVR*LWVARR
Trigger: CCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGA...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGAGGGCTTATGGTGTGTaGAGTAGTTCAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQRAYGV*SSSGPG
Trigger: ACCAGGACCTGAACTACTGCACACACCATAAGCCCT...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGAGGGCTTATGGTGTGTaGAGTAGTTCAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRRAYGV*SSSGPG
Trigger: ACCAGGACCTGAACTACTGCACACACCATAAGCCCT...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCTCGGCTGGGGGCCGGTaGTTCTGCAGCCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ARSELGFSAAVHEASLLFSAGGR*FCSLSR
Trigger: CCGGCTGAGGCTGCAGAAGCACCGGCCCCCAGCCGA...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCTCGGCTGGGGGCCGGTaGTTCTGCAGCCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGSAGGR*FCSLSR
Trigger: CCGGCTGAGGCTGCAGAAGCACCGGCCCCCAGCCGA...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCCTCCACGCGCGAGCCTaGGGGGCCCCCACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGLHARA*GAPTSL
Trigger: GAGAGAAGTGGGGGCCCCCCAGGCTCGCGCGTGGAG...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGAGAACCTGCTCGGTCTaGACTCGGTTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AATGCRQASRTSGGEPARRTCSV*TRFLSS
Trigger: GCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCT...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTGGGAGGAGGCTCTaGGCCGCGGCTGCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIRGRRL*AAAARV
Trigger: AACCCGGGCAGCCGCGGCGCAGAGCCTCCTCCCACG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCTTTATATCCGCCCTaGGAGGTCCCGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNSLYPP*EVPRQP
Trigger: GGGCTGCCGCGGGACCTCGCAGGGCGGATATAAAGA...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATGGTCCGTGCGGCCGCTaGTGTGCAGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYGPCGR*CAGPGT
Trigger: GGTCCCAGGACCTGCACAGCAGCGGCCGCACGGACC...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTCACAAAATCCATGCTaGTCATCACATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVSQNPC*SSHPGR
Trigger: CCTGCCTGGATGTGATGAGCAGCATGGATTTTGTGA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACAGCCTTCCTGGCAGTTaGACTGCCAGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNSLPGS*TARAAG
Trigger: GCCAGCAGCCCTGGCAGTGCAACTGCCAGGAAGGCT...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGTGTCACGCTTGCTGTaGGCGTCCCTGACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQAVSRLL*ASLTAV
Trigger: CACCGCCGTCAGGGACGCGCACAGCAAGCGTGACAC...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGCAGGTGGCCCCATTGTaGCAGGGTGCGTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQAQVAPL*QGACSH
Trigger: GTGCGAGCACGCACCCTGCCACAATGGGGCCACCTG...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCCGGCAGGGGTCGGCTaGGGGCCGGTGCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIPAGVG*GPVLLQ
Trigger: CTGCAGAAGCACCGGCCCCCAGCCGACCCCTGCCGG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGACCATTAGAACAGGGTaGAGAGCTGCAGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRTIRTG*RAAVVN
Trigger: ATTGACTACTGCAGCTCTTCACCCTGTTCTAATGGT...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGCTGGGTAGCGGGCCTTaGAGCCATTCTTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQALGSGP*SHSCRR
Trigger: GCGCCGACAAGAATGGCTTCAAGGCCCGCTACCCAG...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCACTCAGGCAGTGCATaGTTCTTATGCGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRHSGSA*FLCVIQ
Trigger: CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTG...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCACTCAGGCAGTGCATaGTTCTTATGCGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQHSGSA*FLCVIQ
Trigger: CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGGCACTTGCATTCCCCTaGTTTGTCACAAAATCCATG +
Preference number: 4 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRALAFP*FVTKSM
Trigger: CATGGATTTTGTGACAAACCAGGGGAATGCAAGTGC...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACGCCGTAGAAGCCGGGTaGGCAGGTACAGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNAVEAG*AGTGVA
Trigger: AGCTACTCCTGTACCTGCCCACCCGGCTTCTACGGC...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGCCGTCGGGCAGACTaGAGGAGTCGACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIRRRAD*RSRRPA
Trigger: TGCTGGGCGTCGACTCCTTCAGTCTGCCCGACGGCG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTAGCGGATGGGGTTGCTaGACGCGGAGTCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILSGWGC*TRSRRP
Trigger: GGGGCGCCGACTCCGCGTTCAGCAACCCCATCCGCT...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCATTAGAACAGGGTaGAGAGCTGCAGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRTIRTG*RAAVVN
Trigger: ATTGACTACTGCAGCTCTTCACCCTGTTCTAATGGT...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCACACCTCAGTTGCTATaGCGCACTCATCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLTPQLL*RTHPSP
Trigger: AGGAGAAGGATGAGTGCGTCATAGCAACTGAGGTGT...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTGCTCTCGCCGGCGCCTaGCGCCCTTATATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPALAGA*RPYIQP
Trigger: CGGCTGAATATAAGGGCGGCAGGCGCCGGCGAGAGC...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCTCTTTATATCCGCCCTaGGAGGTCCCGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ARSELGFSAAVHEASLLFSLYPP*EVPRQP
Trigger: GGGCTGCCGCGGGACCTCGCAGGGCGGATATAAAGA...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCAGCGCGCACCGACTaGCCATGCTGCTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPPARTD*PCCFAP
Trigger: TGGAGCGAAGCAGCATGGGCAGTCGGTGCGCGCTGG...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGCCTGGCCCGTGTTGGTaGAGGTGGCTCCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQAPGPCW*RWLHSC
Trigger: GCAAGAATGGAGCCACCTGCACCAACACGGGCCAGG...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCTCAATTCACAGATTTTaGCGTAGAAGCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLSIHRF*RRSRVG
Trigger: GCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGA...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTACCGTCAGGTGCCTCTaGGTGGCCAGGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPTVRCL*VARRLM
Trigger: CATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGT...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCAGGAACTGGCAGTTaGGACCCCCGTAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGAGTGS*DPRSLG
Trigger: CCCGAGGCTACGGGGGTCCCAACTGCCAGTTCCTGC...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCGCTGTGGTCCCCGTaGAAGTCCGCCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQAALWSP*KSAFLL
Trigger: CAACAAGAAGGCGGACTTCCACGGGGACCACAGCGC...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTTCAGCAGCATTCGTTaGGGCATATATCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVFSSIR*GIYPWN
Trigger: ATTCCAAGGATATATGCCCCAACGAATGCTGCTGAA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTAGGTGCCCGGCCAGGTaGAGCCGAAGGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILRCPAR*SRRGSG
Trigger: TCCGCTTCCCCTTCGGCTTCACCTGGCCGGGCACCT...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCTCTAGCTTCTCAGTaGGGTCCACCACCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPPLASQ*GPPPLG
Trigger: GCCCAGCGGTGGTGGACCTCACTGAGAAGCTAGAGG...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTGCTGTGCGCGTCCCTaGCGGCGGTGTCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILCCARP*RRCRHP
Trigger: AGGGTGACGACACCGCCGTCAGGGACGCGCACAGCA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTCGCACCGACTGCCCATaGTGCTTCGCTCCACGCGCG +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILRTDCP*CFAPRA
Trigger: CGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGTGCG...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGTCCTGGCAGTTGCACTaGCAGGGCTGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGSWQLH*QGCWQV
Trigger: CACCTGCCAGCAGCCCTGGCAGTGCAACTGCCAGGA...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGAGCCTTCCTGGCAGTTaGACTGCCAGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGSLPGS*TARAAG
Trigger: GCCAGCAGCCCTGGCAGTGCAACTGCCAGGAAGGCT...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTACGTTGTCGTCACAGTaGCTCCCCGAGAAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPTLSSQ*LPEKPA
Trigger: GGCCGGCTTCTCGGGGAGGCACTGTGACGACAACGT...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGATTTTACACCTCAGTTaGTATGACGCACTCATCCTT +
Preference number: 4 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQILHLS*YDALIL
Trigger: AAGGATGAGTGCGTCATAGCAACTGAGGTGTAAAAT...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTCCCCACAGGTGAAGTaGCCGAAGGCATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYSPQVK*PKASSR
Trigger: CCGGGACGATGCCTTCGGCCACTTCACCTGTGGGGA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCACTGCCAGGGCTGCTaGCAGGTGCCATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPHCQGC*QVPWRQ
Trigger: CTGTCTCCATGGCACCTGCCAGCAGCCCTGGCAGTG...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTCCCCTGAGGAGCCCTaGGGCTGGCACTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYSPEEP*GWHLVS
Trigger: TGACACCAAGTGCCAGCCCCAGGGCTCCTCAGGGGA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTTCCCCTGAGGAGCCCTaGGGCTGGCACTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPSPEEP*GWHLVS
Trigger: TGACACCAAGTGCCAGCCCCAGGGCTCCTCAGGGGA...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTACCGACTGCCCATGCTaGTTCGCTCCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILTDCPC*FAPRAS
Trigger: GCTCGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGT...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGTCACAGTACCGGCCCTaGCAGCCCACTCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQSQYRP*QPTLHL
Trigger: CAAGTGCAGAGTGGGCTGGCAGGGCCGGTACTGTGA...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGTCACAGTACCGGCCCTaGCAGCCCACTCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGSQYRP*QPTLHL
Trigger: CAAGTGCAGAGTGGGCTGGCAGGGCCGGTACTGTGA...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTTGTGGCAGGGTGCGTaGTCGCACCTGCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILLWQGA*SHLLTG
Trigger: CCCCGTCAGCAGGTGCGAGCACGCACCCTGCCACAA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCCCATTGTGGCAGGGTaGGTGCTCGCACCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIPIVAG*VLAPAD
Trigger: GTCAGCAGGTGCGAGCACGCACCCTGCCACAATGGG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTCCCCTGGCCCGTGTTaGTGCAGGTGGCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYSPGPC*CRWLHS
Trigger: AGAATGGAGCCACCTGCACCAACACGGGCCAGGGGA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCGTTATAGTCCACCGCTaGGTAGCGGGCCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGVIVHR*VAGLEA
Trigger: GGCTTCAAGGCCCGCTACCCAGCGGTGGACTATAAC...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCCTTTCCAGCCAGGGTTaGACACTTTCTCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGLSSQG*TLSPHA
Trigger: AGCGTGGGGAGAAAGTGTGCAACCCTGGCTGGAAAG...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCGATGATGCTGACTaGGATGTCCTTCTCACGCTG +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPPDDAD*DVLLTL
Trigger: CAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGG...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCCCTTCTCCTCGGATATaGCGTACACCGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: ARSELGFSAAVHEASLLFPSPRI*RTPTGT
Trigger: AGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGG...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGAATTCCCAAGAGAGCTaGAGAGCTTCCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGNSQES*RASSRA
Trigger: GGCTCGGGAGGAAGCTCTGCAGCTCTCTTGGGAATT...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGTCAATTCACAGATTTTaGCGTAGAAGCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQASIHRF*RRSRVG
Trigger: GCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGA...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCAACAGGGTGAAGAGCTaGAGTAGTCAATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLNRVKS*SSQFSS
Trigger: AGAAGAAAATTGACTACTGCAGCTCTTCACCCTGTT...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCTATACACTCAGGCAGTaGATGCTTCTTATGCGTAAT +
Preference number: 4 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLYTLRQ*MLLMRN
Trigger: ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATA...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGATGAATCCAGCCAATaGCATCCAGTACACACGCGC +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGDESSQ*HPVHTR
Trigger: GCGCGTGTGTACTGGATGGCATTGGCTGGATTCATC...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTTGTCACAAAATCCATaGTGCTCATCACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNLSQNP*CSSHPG
Trigger: GCCTGGATGTGATGAGCAGCATGGATTTTGTGACAA...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTAGCCCACTCTGCACTTaGATTCCCCTGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPSPLCT*IPLVCH
Trigger: GTGACAAACCAGGGGAATGCAAGTGCAGAGTGGGCT...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGTGTTCTCGAGATCCGTaGAGCTCCCTCCGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQCSRDP*SSLRSY
Trigger: GTAAGAACGGAGGGAGCTGCACGGATCTCGAGAACA...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTGTTCTCGAGATCCGTaGAGCTCCCTCCGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYCSRDP*SSLRSY
Trigger: GTAAGAACGGAGGGAGCTGCACGGATCTCGAGAACA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTTGGTGTTCTTGATCTaGGTGGCCCCGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYLVFLI*VAPMML
Trigger: CAGCATCATCGGGGCCACGCAGATCAAGAACACCAA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATTCTCACGCTGGCAGTTaGCCAGGTTGTTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYSHAGS*PGCSWS
Trigger: AGACCATGAACAACCTGGCCAACTGCCAGCGTGAGA...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTCCGCGTCTTTCCGATaGATCCAGCCAATGCCATCC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILSASFR*IQPMPS
Trigger: GGATGGCATTGGCTGGATTCATCGGAAAGACGCGGA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR CCA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACACACCGACTGGTACTTaGTGTCTTTTGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNTPTGT*CLLKLN
Trigger: GTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGT...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTACACCTCAGTTGCTATaGCGCACTCATCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSITPQLL*RTHPSP
Trigger: AGGAGAAGGATGAGTGCGTCATAGCAACTGAGGTGT...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGCAGAAAAGCGCCCTTaGCTCGCCCCAGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLAEKRP*LAPDRR
Trigger: CCTGCGGTCTGGGGCGAGGCAAGGGCGCTTTTCTGC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCTTCTGGGTTTTCTGTTaGGAGGTCATCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGFWVFC*EVIRRI
Trigger: GATTCTCCTGATGACCTCGCAACAGAAAACCCAGAA...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGTCACAAAATCCATGCTaGTCATCACATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQSQNPC*SSHPGR
Trigger: CCTGCCTGGATGTGATGAGCAGCATGGATTTTGTGA...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCTTGTCACAAAATCCATaGTGCTCATCACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARSELGFSAAVHEASLLFLSQNP*CSSHPG
Trigger: GCCTGGATGTGATGAGCAGCATGGATTTTGTGACAA...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGTGTCACGCTTGCTGTaGGCGTCCCTGACGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLVSRLL*ASLTAV
Trigger: CACCGCCGTCAGGGACGCGCACAGCAAGCGTGACAC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCCCTTTTTCTTTCAGATaGTTCTCCACCCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGPFSFR*FSTPEC
Trigger: ACACTCAGGGGTGGAGAAGCATCTGAAAGAAAAAGG...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCTGATGAGTCTTTCTaGGTTTTCTGTTGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGADESF*VFCCEV
Trigger: GACCTCGCAACAGAAAACCCAGAAAGACTCATCAGC...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTCGTTCTTACAAGGGCTaGGGTCACACTCGTCAATCC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILRSYKG*GHTRQS
Trigger: GGATTGACGAGTGTGACCCCAGCCCTTGTAAGAACG...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGCAGGAACTGGCAGTTaGGACCCCCGTAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLAGTGS*DPRSLG
Trigger: CCCGAGGCTACGGGGGTCCCAACTGCCAGTTCCTGC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTCCTCTAGCTTCTCAGTaGGGTCCACCACCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLPLASQ*GPPPLG
Trigger: GCCCAGCGGTGGTGGACCTCACTGAGAAGCTAGAGG...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTCTGGGTAGCGGGCCTTaGAGCCATTCTTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLLGSGP*SHSCRR
Trigger: GCGCCGACAAGAATGGCTTCAAGGCCCGCTACCCAG...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTTCCTGGCAGTTGCACTaGCAGGGCTGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLSWQLH*QGCWQV
Trigger: CACCTGCCAGCAGCCCTGGCAGTGCAACTGCCAGGA...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTAGCCAGGCGGGCAGGTaGAGGAGAAGTCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLSQAGR*RRSRSR
Trigger: GCGTGAACGACTTCTCCTGCACCTGCCCGCCTGGCT...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGAGTGCATGCTTCTTATaGGTAATTCAGTTCACCCAT +
Preference number: 4 (lower is better)
Translates to: RATVHSATATSRKAVPQASACFL*VIQFTH
Trigger: ATGGGTGAACTGAATTACGCATAAGAAGCATGCACT...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATGCACTTGCATTCCCCTaGTTTGTCACAAAATCCATG +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYALAFP*FVTKSM
Trigger: CATGGATTTTGTGACAAACCAGGGGAATGCAAGTGC...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTCCGCACAGGTCATaGCACTCAATTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIRPHRS*HSIHRF
Trigger: AAATCTGTGAATTGAGTGCCATGACCTGTGCGGACG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCACACCGACTGGTACTTaGTGTCTTTTGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ARSELGFSAAVHEASLLFTPTGT*CLLKLN
Trigger: GTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGT...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATGACGTACACCGACTaGTACTTGGTGTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGMTYTD*YLVSFE
Trigger: TTCAAAAGACACCAAGTACCAGTCGGTGTACGTCAT...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTTGTTGACGAACTCCTaGAGCTTCAGTTCGAACACC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILLLTNS*SFSSNT
Trigger: GGTGTTCGAACTGAAGCTGCAGGAGTTCGTCAACAA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGGCAGATCGGCTCTGTaGAGTAGGGCCCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLGRSAL*SRALSS
Trigger: GCTGGAAAGGGCCCTACTGCACAGAGCCGATCTGCC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCAACAGGGTGAAGAGCTaGAGTAGTCAATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGNRVKS*SSQFSS
Trigger: AGAAGAAAATTGACTACTGCAGCTCTTCACCCTGTT...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTCTGCTGTGCAGGTCCTaGGACCACTCCTCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRLLCRS*DHSSPT
Trigger: GGTGGGCGAGGAGTGGTCCCAGGACCTGCACAGCAG...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATGACGTACACCGACTaGTACTTGGTGTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYMTYTD*YLVSFE
Trigger: TTCAAAAGACACCAAGTACCAGTCGGTGTACGTCAT...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGAGCGGATGGGGTTGCTaGACGCGGAGTCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQSGWGC*TRSRRP
Trigger: GGGGCGCCGACTCCGCGTTCAGCAACCCCATCCGCT...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTTCTGGGTTTTCTGTTaGGAGGTCATCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILFWVFC*EVIRRI
Trigger: GATTCTCCTGATGACCTCGCAACAGAAAACCCAGAA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGTATACACTCAGGCAGTaGATGCTTCTTATGCGTAAT +
Preference number: 4 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGYTLRQ*MLLMRN
Trigger: ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATA...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTCACTGCCAGGGCTGCTaGCAGGTGCCATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRHCQGC*QVPWRQ
Trigger: CTGTCTCCATGGCACCTGCCAGCAGCCCTGGCAGTG...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGCGTGCTCGCACCTGCTaGCGGGGGCACTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQRARTC*RGHCSS
Trigger: GGAACTGCAGTGCCCCCGTCAGCAGGTGCGAGCACG...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTTTGCACTGCCAGGGCTaGTGGCAGGTGCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRLHCQG*WQVPWR
Trigger: TCTCCATGGCACCTGCCAGCAGCCCTGGCAGTGCAA...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGCCATGGAGACAGCCTaGATAGCGGATACACTCGTC +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLAMETA*IADTLV
Trigger: GACGAGTGTATCCGCTATCCAGGCTGTCTCCATGGC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGCGGTGGCCCCTCTCGTaGCAGGTGGCCCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQRWPLS*QVAPLW
Trigger: CCACAATGGGGCCACCTGCCACGAGAGGGGCCACCG...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAACCGACTGCCCATGCTaGTTCGCTCCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSTDCPC*FAPRAS
Trigger: GCTCGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGT...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGCCAGCGCGCACCGACTaGCCATGCTGCTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQPARTD*PCCFAP
Trigger: TGGAGCGAAGCAGCATGGGCAGTCGGTGCGCGCTGG...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATCCCATTGTGGCAGGGTaGGTGCTCGCACCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNPIVAG*VLAPAD
Trigger: GTCAGCAGGTGCGAGCACGCACCCTGCCACAATGGG...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTCACATAGACCCGAAGTaGCTTTGTACATATTTACCA +
Preference number: 4 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILHIDPK*LCTYLP
Trigger: TGGTAAATATGTACAAAGGCACTTCGGGTCTATGTG...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGTCCCCAGCTCGCAGGTaGCACCTGTGTACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQSPARR*HLCTQA
Trigger: GGCCTGGGTACACAGGTGCCACCTGCGAGCTGGGGA...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTTCTTGTCGGCGCTGTaGTCCCCGTGGAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNFLSAL*SPWKSA
Trigger: GGCGGACTTCCACGGGGACCACAGCGCCGACAAGAA...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACACGCTCCCCACAGGTaGAGTGGCCGAAGGCATCGT +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSHAPHR*SGRRHR
Trigger: ACGATGCCTTCGGCCACTTCACCTGTGGGGAGCGTG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCATCCCCACAGGTGAAGTaGCCGAAGGCATCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSSPQVK*PKASSR
Trigger: CCGGGACGATGCCTTCGGCCACTTCACCTGTGGGGA...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGGGGAATGGCCCGCCCTaGCCCTCTAGCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQGNGPP*PSSFSV
Trigger: CACTGAGAAGCTAGAGGGCCAGGGCGGGCCATTCCC...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGTTGCACTGCCAGGGCTaGTGGCAGGTGCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQLHCQG*WQVPWR
Trigger: TCTCCATGGCACCTGCCAGCAGCCCTGGCAGTGCAA...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACCTGGCCCGTGTTGGTaGAGGTGGCTCCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSPGPCW*RWLHSC
Trigger: GCAAGAATGGAGCCACCTGCACCAACACGGGCCAGG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTTTGGTGTTCTTGATCTaGGTGGCCCCGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRLVFLI*VAPMML
Trigger: CAGCATCATCGGGGCCACGCAGATCAAGAACACCAA...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATGTTATAGTCCACCGCTaGGTAGCGGGCCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNVIVHR*VAGLEA
Trigger: GGCTTCAAGGCCCGCTACCCAGCGGTGGACTATAAC...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR TCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACCCGATGATGCTGACTaGGATGTCCTTCTCACGCTG +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSPDDAD*DVLLTL
Trigger: CAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATAGGTGGCTCCATTCTTaGAGGGCTTATGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNRWLHS*RAYGVC
Trigger: GCACACACCATAAGCCCTGCAAGAATGGAGCCACCT...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CTGGCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTGCTGATGAGTCTTTCTaGGTTTTCTGTTGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: LAHKNPKYTLRQCMLLMRADESF*VFCCEV
Trigger: GACCTCGCAACAGAAAACCCAGAAAGACTCATCAGC...ACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAAGCCCACTCTGCACTTaGATTCCCCTGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSSPLCT*IPLVCH
Trigger: GTGACAAACCAGGGGAATGCAAGTGCAGAGTGGGCT...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAAGGTGGCTCCATTCTTaGAGGGCTTATGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSRWLHS*RAYGVC
Trigger: GCACACACCATAAGCCCTGCAAGAATGGAGCCACCT...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTATTTTACACCTCAGTTaGTATGACGCACTCATCCTT +
Preference number: 4 (lower is better)
Translates to: PPSSSAAFVGAYILGILLILHLS*YDALIL
Trigger: AAGGATGAGTGCGTCATAGCAACTGAGGTGTAAAAT...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGGGGTCGCCGGCTTCCTaGTTTTGTCTTGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQGSPAS*FCLELL
Trigger: AAGAAGCTCAAGACAAAACCAGGAAGCCGGCGACCC...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR GCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCATTGTTGACGAACTCCTaGAGCTTCAGTTCGAACACC +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSLLTNS*SFSSNT
Trigger: GGTGTTCGAACTGAAGCTGCAGGAGTTCGTCAACAA...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CCA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACGTCCGCACAGGTCATaGCACTCAATTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSRPHRS*HSIHRF
Trigger: AAATCTGTGAATTGAGTGCCATGACCTGTGCGGACG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGCCTTTTTCTTTCAGATaGTTCTCCACCCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQPFSFR*FSTPEC
Trigger: ACACTCAGGGGTGGAGAAGCATCTGAAAGAAAAAGG...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATAGTGCATGCTTCTTATaGGTAATTCAGTTCACCCAT +
Preference number: 4 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNSACFL*VIQFTH
Trigger: ATGGGTGAACTGAATTACGCATAAGAAGCATGCACT...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR GCA 90 bp ATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCAGCACATAGACCCGAAGTaGCTTTGTACATATTTACCA +
Preference number: 4 (lower is better)
Translates to: IRIQNIHSGSACFLCVIQHIDPK*LCTYLP
Trigger: TGGTAAATATGTACAAAGGCACTTCGGGTCTATGTG...CTGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp TGGGAGGAGGCTCTGCGCCGCGGCTGCCCGGGTTCCCCTGCGCTCTaGCCTCGGCCGGGTCGGGTCTCCGCGGGTGCGCGCAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: WEEALRRGCPGSPAL*PRPGRVSAGARRGS
Trigger: AGATCCTCTGCGCGCACCCGCGGAGACCCGACCCGGCCGAGGGCAGAGCGCAGGGGAACCCGGGCAGCCGCGGCGCAGAGCCTCCTCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CCA 90 bp CTGCCCTCGGCCGGGTCGGGTCTCCGCGGGTGCGCGCAGAGGATCTaGCTCTCGCCGGCGCCTGCCGCCCTTATATTCAGCCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LPSAGSGLRGCAQRI*LSPAPAALIFSRPP
Trigger: GGGCGGCCGGCTGAATATAAGGGCGGCAGGCGCCGGCGAGAGCCAGATCCTCTGCGCGCACCCGCGGAGACCCGACCCGGCCGAGGGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CCA 90 bp CAGCGCGCACCGACTGCCCATGCTGCTTCGCTCCACGCGCGAGCCTaGGGGGCCCCCACTTCTCTCCTTAGAACAGCGGCGGACGCGCGG +
Preference number: 5 (lower is better)
Translates to: QRAPTAHAASLHARA*GAPTSLLRTAADAR
Trigger: CCGCGCGTCCGCCGCTGTTCTAAGGAGAGAAGTGGGGGCCCCCCAGGCTCGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGTGCGCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366756.4
ENST00000616526.2
ENST00000630365.1
ENST00000630500.1
CDS CCA 90 bp AGGATGACCCCGGCGCACACGGCCACCCAGGGGAATGGCCCGCCCTaGCCCTCTAGCTTCTCAGTGAGGTCCACCACCGCTGGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RMTPAHTATQGNGPP*PSSFSVRSTTAGPG
Trigger: CCCGGGCCCAGCGGTGGTGGACCTCACTGAGAAGCTAGAGGGCCAGGGCGGGCCATTCCCCTGGGTGGCCGTGTGCGCCGGGGTCATCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGACTCCCCTGGCCCGTGTaGGTGCAGGTGGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRLPWPV*VQVAPF
Trigger: GAATGGAGCCACCTGCACCAACACGGGCCAGGGGAG...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGCCTTGAAGCCATTCTaGTCGGCGCTGTGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVALKPF*SALWSP
Trigger: CGGGGACCACAGCGCCGACAAGAATGGCTTCAAGGC...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGCACTTGGTGTCACGCTaGCTGTGCGCGTCCCTGACG +
Preference number: 5 (lower is better)
Translates to: DVTEGSAAGGRAATGCRQHLVSR*LCASLT
Trigger: CGTCAGGGACGCGCACAGCAAGCGTGACACCAAGTG...CTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACCCCCCGCGGCAGCAGTaGCGGTTCCCCAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNPPRQQ*RFPSSP
Trigger: GGGGCTGCTGGGGAACCGCAACTGCTGCCGCGGGGG...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGGCGGTGTCGTCACCCTaGAGGTCCTGCACGAGGTTA +
Preference number: 5 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRAVSSP*RSCTRL
Trigger: TAACCTCGTGCAGGACCTCAAGGGTGACGACACCGC...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp GGGTCTCCGCGGGTGCGCGCAGAGGATCTGGCTCTCGCCGGCGCCTaGCGCCCTTATATTCAGCCGGCCGCCCGCATGGCTAATGAGATG +
Preference number: 5 (lower is better)
Translates to: GSPRVRAEDLALAGA*RPYIQPAARMANEM
Trigger: CATCTCATTAGCCATGCGGGCGGCCGGCTGAATATAAGGGCGGCAGGCGCCGGCGAGAGCCAGATCCTCTGCGCGCACCCGCGGAGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS GCA 90 bp CCGGTCTCCGCCTCTTCCCAAGGCCGCGGTTCTTTATATCCGCCCTaGGAGGTCCCGCGGCAGCCCCAGGGATGCCCGAGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PVSASSQGRGSLYPP*EVPRQPQGCPRKGS
Trigger: GCTGCCTTTCCTCGGGCATCCCTGGGGCTGCCGCGGGACCTCGCAGGGCGGATATAAAGAACCGCGGCCTTGGGAAGAGGCGGAGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366756.4
ENST00000616526.2
ENST00000630365.1
ENST00000630500.1
CDS-3UTR CAA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCTTCTCACGCTGGCAGTaGGCCAGGTTGTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVFSRWQ*ARLFMV
Trigger: GACCATGAACAACCTGGCCAACTGCCAGCGTGAGAA...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCCCCAGCAGCCCCTTCTaGTTGACGAACTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GPRQAVGRRRGPQEENLLPSSPF*LTNSCS
Trigger: GCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCTGGG...GAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp AGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGACAGCCCACTCTGCACTaGCATTCCCCTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RRPGRDRLSAGVEDLRRRQPTLH*HSPGLS
Trigger: TGACAAACCAGGGGAATGCAAGTGCAGAGTGGGCTG...TCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGCCCGGCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp CCGCTGCTGTGCAGGTCCTGGGACCACTCCTCGCCCACCGTCAGGTaGCTCTGGGTGGCCAGGCGGCTGATGAGTCTTTCTGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PLLCRSWDHSSPTVR*LWVARRLMSLSGFS
Trigger: AGAAAACCCAGAAAGACTCATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGAGGAGTGGTCCCAGGACCTGCACAGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCGGCAGAAAAGCGCCCTaGCCTCGCCCCAGACCGCAG +
Preference number: 5 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGGRKAP*PRPRPQ
Trigger: CTGCGGTCTGGGGCGAGGCAAGGGCGCTTTTCTGCC...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGCAGGTGGCTCCATTCTaGCAGGGCTTATGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: AATGCRQASRTSGGEPARQVAPF*QGLWCV
Trigger: CACACACCATAAGCCCTGCAAGAATGGAGCCACCTG...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGCCGAGGTCCACACACTaGGCACCATTAGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: AATGCRQASRTSGGEPARPRSTH*APLEQG
Trigger: ACCCTGTTCTAATGGTGCCAAGTGTGTGGACCTCGG...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGGGTACTTGGTGTCTTTaGAAGTTGAACAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRGTWCL*KLNSPS
Trigger: ACTCGGGCTGTTCAACTTCAAAAGACACCAAGTACC...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp ACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCGGCAGGCTTCAGCAGCATTCGTaGGGGCATATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: TSRKAVPQAAGPRQAVGRLQQHS*GHISLE
Trigger: TTCCAAGGATATATGCCCCAACGAATGCTGCTGAAG...CCTGCCGACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp CGGTGTCACAGCAAAGATCCGCGTCTTTCCGATGAATCCAGCCAATaGCATCCAGTACACACGCGCAGGACCGGAGGGGCCGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: RCHSKDPRLSDESSQ*HPVHTRRTGGAGPW
Trigger: CCACGGCCCGGCCCCTCCGGTCCTGCGCGTGTGTACTGGATGGCATTGGCTGGATTCATCGGAAAGACGCGGATCTTTGCTGTGACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CCA 90 bp CTGTGCAGGTCCTGGGACCACTCCTCGCCCACCGTCAGGTGCCTCTaGGTGGCCAGGCGGCTGATGAGTCTTTCTGGGTTTTCTGTTGCG +
Preference number: 5 (lower is better)
Translates to: LCRSWDHSSPTVRCL*VARRLMSLSGFSVA
Trigger: CGCAACAGAAAACCCAGAAAGACTCATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGAGGAGTGGTCCCAGGACCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGGGGAAGCGGATGGGGTaGCTGAACGCGGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQGKRMG*LNAESA
Trigger: CGCCGACTCCGCGTTCAGCAACCCCATCCGCTTCCC...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATGCGCAGTCGTCCACGTaGTCGTCACAGTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYAQSST*SSQCLP
Trigger: GGGGAGGCACTGTGACGACAACGTGGACGACTGCGC...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCGCAGTCGTCCACGTaGTCGTCACAGTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VSQQQSTRPPSSSAAFVGAQSST*SSQCLP
Trigger: GGGGAGGCACTGTGACGACAACGTGGACGACTGCGC...CCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 90 bp CCTCTCCGTAGTAGTGTTCGTCACACACGAAGCGGTAGGAGTACTTaGGGTCCGTGCGGCCGCTGCTGTGCAGGTCCTGGGACCACTCCT +
Preference number: 5 (lower is better)
Translates to: PLRSSVRHTRSGRST*GPCGRCCAGPGTTP
Trigger: AGGAGTGGTCCCAGGACCTGCACAGCAGCGGCCGCACGGACCTCAAGTACTCCTACCGCTTCGTGTGTGACGAACACTACTACGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGGAAGCGGATGGGGTaGCTGAACGCGGAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILGKRMG*LNAESA
Trigger: CGCCGACTCCGCGTTCAGCAACCCCATCCGCTTCCC...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACCAGGTGGCTCCATTCTaGCAGGGCTTATGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNQVAPF*QGLWCV
Trigger: CACACACCATAAGCCCTGCAAGAATGGAGCCACCTG...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTTCTCACGCTGGCAGTaGGCCAGGTTGTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNFSRWQ*ARLFMV
Trigger: GACCATGAACAACCTGGCCAACTGCCAGCGTGAGAA...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCACTTGGTGTCACGCTaGCTGTGCGCGTCCCTGACG +
Preference number: 5 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQHLVSR*LCASLT
Trigger: CGTCAGGGACGCGCACAGCAAGCGTGACACCAAGTG...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 90 bp GGGCTCCGATCTCCGGTGTCACAGCAAAGATCCGCGTCTTTCCGATaGATCCAGCCAATGCCATCCAGTACACACGCGCAGGACCGGAGG +
Preference number: 5 (lower is better)
Translates to: GLRSPVSQQRSASFR*IQPMPSSTHAQDRR
Trigger: CCTCCGGTCCTGCGCGTGTGTACTGGATGGCATTGGCTGGATTCATCGGAAAGACGCGGATCTTTGCTGTGACACCGGAGATCGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR CAA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGCAGCCCACTCTGCACTaGCATTCCCCTGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RATVHSATATSRKAVPQAQPTLH*HSPGLS
Trigger: TGACAAACCAGGGGAATGCAAGTGCAGAGTGGGCTG...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp ACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGCCGGGCCGCGACAGGCTGTCAGACCCGAAGTGCCTTaGTACATATTTACCAAAATT +
Preference number: 5 (lower is better)
Translates to: TATSRKAVPQAAGPRQAVRPEVP*YIFTKI
Trigger: AATTTTGGTAAATATGTACAAAGGCACTTCGGGTCT...GACAGCCTGTCGCGGCCCGGCCGCCTGCGGCACTGCCTTCCGTGACGTCGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCCTTTCCAGCCAGGGTaGCACACTTTCTCCCCACGC +
Preference number: 5 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIPFQPG*HTFSPR
Trigger: GCGTGGGGAGAAAGTGTGCAACCCTGGCTGGAAAGG...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCCCGAGGTCCACACACTaGGCACCATTAGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGPRSTH*APLEQG
Trigger: ACCCTGTTCTAATGGTGCCAAGTGTGTGGACCTCGG...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACAAGTCCGCCTTCTTGTaGGTGTTCTTGATCTGCGTG +
Preference number: 5 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNKSAFL*VFLICV
Trigger: CACGCAGATCAAGAACACCAACAAGAAGGCGGACTT...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTGGAAGTCCGCCTTCTaGTTGGTGTTCTTGATCTGC +
Preference number: 5 (lower is better)
Translates to: QAVGRRRGPQEENLLGLNWKSAF*LVFLIC
Trigger: GCAGATCAAGAACACCAACAAGAAGGCGGACTTCCA...GTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTGCGGTGTCGTCACCCTaGAGGTCCTGCACGAGGTTA +
Preference number: 5 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIAVSSP*RSCTRL
Trigger: TAACCTCGTGCAGGACCTCAAGGGTGACGACACCGC...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp CTGTGGTCCCCGTGGAAGTCCGCCTTCTTGTTGGTGTTCTTGATCTaGGTGGCCCCGATGATGCTGACTGAGATGTCCTTCTCACGCTGG +
Preference number: 5 (lower is better)
Translates to: LWSPWKSAFLLVFLI*VAPMMLTEMSFSRW
Trigger: CCAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCTTCTTGTTGGTGTTCTaGATCTGCGTGGCCCCGATG +
Preference number: 5 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGFLLVF*ICVAPM
Trigger: CATCGGGGCCACGCAGATCAAGAACACCAACAAGAA...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTTGGTGTCTTTTGAAGTaGAACAGCCCGAGTCCGGCC +
Preference number: 5 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPWCLLK*NSPSPA
Trigger: GGCCGGACTCGGGCTGTTCAACTTCAAAAGACACCA...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 90 bp AGCAAGGGCCGTCCGCACAGGTCATGGCACTCAATTCACAGATTTTaGCGTAGAAGCCGGGTGGGCAGGTACAGGAGTAGCTGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: SKGRPHRSWHSIHRF*RRSRVGRYRSSCSR
Trigger: TCGAGAACAGCTACTCCTGTACCTGCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGAGTGCCATGACCTGTGCGGACGGCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTTTCTTGTTGGTGTTCTaGATCTGCGTGGCCCCGATG +
Preference number: 5 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPFLLVF*ICVAPM
Trigger: CATCGGGGCCACGCAGATCAAGAACACCAACAAGAA...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGGGTACTTGGTGTCTTTaGAAGTTGAACAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: RATVHSATATSRKAVPQAGTWCL*KLNSPS
Trigger: ACTCGGGCTGTTCAACTTCAAAAGACACCAAGTACC...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCCGCGACAGGCTGTCGGCAGGCGTCGAGGACCTCAGGAGGAGAACCTGCTCGGAGACCCGAAGTGCCTTaGTACATATTTACCAAAATT +
Preference number: 5 (lower is better)
Translates to: AATGCRQASRTSGGEPARRPEVP*YIFTKI
Trigger: AATTTTGGTAAATATGTACAAAGGCACTTCGGGTCT...CCGAGCAGGTTCTCCTCCTGAGGTCCTCGACGCCTGCCGACAGCCTGTCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 90 bp ACAGGTCATGGCACTCAATTCACAGATTTTGCCGTAGAAGCCGGGTaGGCAGGTACAGGAGTAGCTGTTCTCGAGATCCGTGCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TGHGTQFTDFAVEAG*AGTGVAVLEIRAAP
Trigger: GGGAGCTGCACGGATCTCGAGAACAGCTACTCCTGTACCTGCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGAGTGCCATGACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATCTTCCTGGTTTTGTCTaGAGCTTCTTCGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: QQQSTRPPSSSAAFVGAYLPGFV*SFFAGE
Trigger: CTCTCCTGCGAAGAAGCTCAAGACAAAACCAGGAAG...ATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS-3UTR CAA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTAGCAGCCCCTTCTTGTaGACGAACTCCTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILSSPFL*TNSCSF
Trigger: GAAGCTGCAGGAGTTCGTCAACAAGAAGGGGCTGCT...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp AGAGCAACTGTCCATAGTGCAACGGCGACGTCACGGAAGGCAGTGCCGCAGGCGTTTCTGGGTTTTCTGTaGCGAGGTCATCAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: RATVHSATATSRKAVPQAFLGFL*RGHQEN
Trigger: ATTCTCCTGATGACCTCGCAACAGAAAACCCAGAAA...CGCCTGCGGCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCTTGCATTCCCCTGGTTaGTCACAAAATCCATGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSELGFSAAVHEASLLFLHSPG*SQNPCC
Trigger: GCAGCATGGATTTTGTGACAAACCAGGGGAATGCAA...GAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTGGTGTCTTTTGAAGTaGAACAGCCCGAGTCCGGCC +
Preference number: 5 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILWCLLK*NSPSPA
Trigger: GGCCGGACTCGGGCTGTTCAACTTCAAAAGACACCA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTTGGAAGTCCGCCTTCTaGTTGGTGTTCTTGATCTGC +
Preference number: 5 (lower is better)
Translates to: ELGFSAAVHEASLLFSSIWKSAF*LVFLIC
Trigger: GCAGATCAAGAACACCAACAAGAAGGCGGACTTCCA...AATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp TTCTCAGCAGCAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCAGAGAAACGGGAGTCTaGCCATCTCACTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: FSAAVHEASLLFSSIRWGRETGV*PSHFHF
Trigger: AAAATGGAAGTGAGATGGCAAGACTCCCGTTTCTCT...GCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTGCTGCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGCAGTCCACGAGGCCTCTTCAGCAGCATTCGTaGGGGCATATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: EENLLGLNSVSQQQSTRPLQQHS*GHISLE
Trigger: TTCCAAGGATATATGCCCCAACGAATGCTGCTGAAG...AGGCCTCGTGGACTGCTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 90 bp CTTCTTGTTGGTGTTCTTGATCTGCGTGGCCCCGATGATGCTGACTaGGATGTCCTTCTCACGCTGGCAGTTGGCCAGGTTGTTCATGGT +
Preference number: 5 (lower is better)
Translates to: LLVGVLDLRGPDDAD*DVLLTLAVGQVVHG
Trigger: ACCATGAACAACCTGGCCAACTGCCAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTGCCTTGAAGCCATTCTaGTCGGCGCTGTGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: PPSSSAAFVGAYILGILLALKPF*SALWSP
Trigger: CGGGGACCACAGCGCCGACAAGAATGGCTTCAAGGC...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 90 bp GCTATGACGCACTCATCCTTCTCCTCGGATATGACGTACACCGACTaGTACTTGGTGTCTTTTGAAGTTGAACAGCCCGAGTCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: AMTHSSFSSDMTYTD*YLVSFEVEQPESGL
Trigger: AAGGCCGGACTCGGGCTGTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGGATGAGTGCGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CGTCGAGGACCTCAGGAGGAGAACCTGCTCGGTCTGAACTCGGTTTCTCAGCAGTACACCGACTGGTACTaGGTGTCTTTTGAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: RRGPQEENLLGLNSVSQQYTDWY*VSFEVE
Trigger: TTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTA...CTGCTGAGAAACCGAGTTCAGACCGAGCAGGTTCTCCTCCTGAGGTCCTCGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CAGTCCACGAGGCCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTTACACCGACTGGTACTaGGTGTCTTTTGAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: QSTRPPSSSAAFVGAYILYTDWY*VSFEVE
Trigger: TTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTA...AAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGGCCTCGTGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACTCCCCTGGCCCGTGTaGGTGCAGGTGGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSLPWPV*VQVAPF
Trigger: GAATGGAGCCACCTGCACCAACACGGGCCAGGGGAG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTCACCTTTCCAGCCAGGGTaGCACACTTTCTCCCCACGC +
Preference number: 5 (lower is better)
Translates to: HKNPKYTLRQCMLLMRNSPFQPG*HTFSPR
Trigger: GCGTGGGGAGAAAGTGTGCAACCCTGGCTGGAAAGG...TGAATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp CCTCCCTCCTCTTCAGCAGCATTCGTTGGGGCATATATCCTTGGAATTTTACTTTTGCATTCCCCTGGTTaGTCACAAAATCCATGCTGC +
Preference number: 5 (lower is better)
Translates to: PPSSSAAFVGAYILGILLLHSPG*SQNPCC
Trigger: GCAGCATGGATTTTGTGACAAACCAGGGGAATGCAA...AAGTAAAATTCCAAGGATATATGCCCCAACGAATGCTGCTGAAGAGGAGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATAAGTCCGCCTTCTTGTaGGTGTTCTTGATCTGCGTG +
Preference number: 5 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNKSAFL*VFLICV
Trigger: CACGCAGATCAAGAACACCAACAAGAAGGCGGACTT...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATTTTCTGGGTTTTCTGTaGCGAGGTCATCAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNFLGFL*RGHQEN
Trigger: ATTCTCCTGATGACCTCGCAACAGAAAACCCAGAAA...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS-3UTR CAA 90 bp GCTCATAAGAATCCAAAATATACACTCAGGCAGTGCATGCTTCTTATGCGTAATAGAGAAACGGGAGTCTaGCCATCTCACTTCCATTTT +
Preference number: 5 (lower is better)
Translates to: AHKNPKYTLRQCMLLMRNRETGV*PSHFHF
Trigger: AAAATGGAAGTGAGATGGCAAGACTCCCGTTTCTCT...ATTACGCATAAGAAGCATGCACTGCCTGAGTGTATATTTTGGATTCTTATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp AGGCCGAGAGCACCGCCAGGGCCAGCGCGCACCGACTaGCCATGCTGCTTCGCTCCACGCGCGAGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RPRAPPGPARTD*PCCFAPRASLG
Trigger: CCCCAGGCTCGCGCGTGGAGCGAAGCAGCATGGGCAGTCGGTGCGCGCTGGCCCTGGCGGTGCTCTCGGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366756.4
ENST00000616526.2
ENST00000630365.1
ENST00000630500.1
CDS TCA 72 bp AGGGGAATGGCCCGCCCTGGCCCTCTAGCTTCTCAGTaGGGTCCACCACCGCTGGGCCCGGGGGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RGMARPGPLASQ*GPPPLGPGAAR
Trigger: CCGAGCTGCCCCCGGGCCCAGCGGTGGTGGACCTCACTGAGAAGCTAGAGGGCCAGGGCGGGCCATTCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp CGGGTGCGCGCAGAGGATCTGGCTCTCGCCGGCGCCTaGCGCCCTTATATTCAGCCGGCCGCCCGCATGGCT +
Preference number: 6 (lower is better)
Translates to: RVRAEDLALAGA*RPYIQPAARMA
Trigger: AGCCATGCGGGCGGCCGGCTGAATATAAGGGCGGCAGGCGCCGGCGAGAGCCAGATCCTCTGCGCGCACCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CCA 72 bp CCGGCGCACACGGCCACCCAGGGGAATGGCCCGCCCTaGCCCTCTAGCTTCTCAGTGAGGTCCACCACCGCT +
Preference number: 6 (lower is better)
Translates to: PAHTATQGNGPP*PSSFSVRSTTA
Trigger: AGCGGTGGTGGACCTCACTGAGAAGCTAGAGGGCCAGGGCGGGCCATTCCCCTGGGTGGCCGTGTGCGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp GCCTCTTCCCAAGGCCGCGGTTCTTTATATCCGCCCTaGGAGGTCCCGCGGCAGCCCCAGGGATGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: ASSQGRGSLYPP*EVPRQPQGCPR
Trigger: CCTCGGGCATCCCTGGGGCTGCCGCGGGACCTCGCAGGGCGGATATAAAGAACCGCGGCCTTGGGAAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366756.4
ENST00000616526.2
ENST00000630365.1
ENST00000630500.1
CDS CAA 72 bp CCTGAGGAGCCCTGGGGCTGGCACTTGGTGTCACGCTaGCTGTGCGCGTCCCTGACGGCGGTGTCGTCACCC +
Preference number: 6 (lower is better)
Translates to: PEEPWGWHLVSR*LCASLTAVSSP
Trigger: GGGTGACGACACCGCCGTCAGGGACGCGCACAGCAAGCGTGACACCAAGTGCCAGCCCCAGGGCTCCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp TGGCCCCATTGTGGCAGGGTGCGTGCTCGCACCTGCTaGCGGGGGCACTGCAGTTCCTGCCCGTGTAGCCAG +
Preference number: 6 (lower is better)
Translates to: WPHCGRVRARTC*RGHCSSCPCSQ
Trigger: CTGGCTACACGGGCAGGAACTGCAGTGCCCCCGTCAGCAGGTGCGAGCACGCACCCTGCCACAATGGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp TTCTCCTCCCCTGAGGAGCCCTGGGGCTGGCACTTGGTGTCACGCTaGCTGTGCGCGTCCCTGACGGCGGTGTCGTCACCCTTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: FSSPEEPWGWHLVSR*LCASLTAVSSPLRS
Trigger: GGACCTCAAGGGTGACGACACCGCCGTCAGGGACGCGCACAGCAAGCGTGACACCAAGTGCCAGCCCCAGGGCTCCTCAGGGGAGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp TGCAGGTCCTGGGACCACTCCTCGCCCACCGTCAGGTaGCTCTGGGTGGCCAGGCGGCTGATGAGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: CRSWDHSSPTVR*LWVARRLMSLS
Trigger: AGAAAGACTCATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGAGGAGTGGTCCCAGGACCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 72 bp TCCTGGGACCACTCCTCGCCCACCGTCAGGTGCCTCTaGGTGGCCAGGCGGCTGATGAGTCTTTCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: SWDHSSPTVRCL*VARRLMSLSGF
Trigger: AAACCCAGAAAGACTCATCAGCCGCCTGGCCACCCAGAGGCACCTGACGGTGGGCGAGGAGTGGTCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp GCACGAGGTTATAGTCCACCGCTGGGTAGCGGGCCTTaGAGCCATTCTTGTCGGCGCTGTGGTCCCCGTGGA +
Preference number: 6 (lower is better)
Translates to: ARGYSPPLGSGP*SHSCRRCGPRG
Trigger: TCCACGGGGACCACAGCGCCGACAAGAATGGCTTCAAGGCCCGCTACCCAGCGGTGGACTATAACCTCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp AGTAGTGTTCGTCACACACGAAGCGGTAGGAGTACTTaGGGTCCGTGCGGCCGCTGCTGTGCAGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SSVRHTRSGRST*GPCGRCCAGPG
Trigger: CCCAGGACCTGCACAGCAGCGGCCGCACGGACCTCAAGTACTCCTACCGCTTCGTGTGTGACGAACACTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 72 bp TCGGCGCTGTGGTCCCCGTGGAAGTCCGCCTTCTTGTaGGTGTTCTTGATCTGCGTGGCCCCGATGATGCTG +
Preference number: 6 (lower is better)
Translates to: SALWSPWKSAFL*VFLICVAPMML
Trigger: CAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAGCGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp GAGGAGGTGAGGGTCGCCGGCTTCCTGGTTTTGTCTTaGGCTTCTTCGCAGGAGAGGGAGGGGGAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: EEVRVAGFLVLS*ASSQEREGEKE
Trigger: CTCTTTCTCCCCCTCCCTCTCCTGCGAAGAAGCTCAAGACAAAACCAGGAAGCCGGCGACCCTCACCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS GCA 72 bp AGCAAAGATCCGCGTCTTTCCGATGAATCCAGCCAATaGCATCCAGTACACACGCGCAGGACCGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SKDPRLSDESSQ*HPVHTRRTGGA
Trigger: GGCCCCTCCGGTCCTGCGCGTGTGTACTGGATGGCATTGGCTGGATTCATCGGAAAGACGCGGATCTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CAA 72 bp CGAGGAGGTGAGGGTCGCCGGCTTCCTGGTTTTGTCTaGAGCTTCTTCGCAGGAGAGGGAGGGGGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: RGGEGRRLPGFV*SFFAGEGGGER
Trigger: TCTTTCTCCCCCTCCCTCTCCTGCGAAGAAGCTCAAGACAAAACCAGGAAGCCGGCGACCCTCACCTCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS CAA 72 bp TTGTCGGCGCTGTGGTCCCCGTGGAAGTCCGCCTTCTaGTTGGTGTTCTTGATCTGCGTGGCCCCGATGATG +
Preference number: 6 (lower is better)
Translates to: LSALWSPWKSAF*LVFLICVAPMM
Trigger: CATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAGCGCCGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp TCGGCGCTGTGGTCCCCGTGGAAGTCCGCCTTCTTGTTGGTGTTCTaGATCTGCGTGGCCCCGATGATGCTGACTGAGATGTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SALWSPWKSAFLLVF*ICVAPMMLTEMSFS
Trigger: TGAGAAGGACATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAGCGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp CCATTCTTGTCGGCGCTGTGGTCCCCGTGGAAGTCCGCCTTCTTGTaGGTGTTCTTGATCTGCGTGGCCCCGATGATGCTGACTGAGATG +
Preference number: 6 (lower is better)
Translates to: PFLSALWSPWKSAFL*VFLICVAPMMLTEM
Trigger: CATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAGCGCCGACAAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp AAGCCATTCTTGTCGGCGCTGTGGTCCCCGTGGAAGTCCGCCTTCTaGTTGGTGTTCTTGATCTGCGTGGCCCCGATGATGCTGACTGAG +
Preference number: 6 (lower is better)
Translates to: KPFLSALWSPWKSAF*LVFLICVAPMMLTE
Trigger: CTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCACAGCGCCGACAAGAATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 72 bp GCCCCGATGATGCTGACTGAGATGTCCTTCTCACGCTaGCAGTTGGCCAGGTTGTTCATGGTCTCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: APMMLTEMSFSR*QLARLFMVSVS
Trigger: GGAGACGGAGACCATGAACAACCTGGCCAACTGCCAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp GGTGTTCTTGATCTGCGTGGCCCCGATGATGCTGACTaGGATGTCCTTCTCACGCTGGCAGTTGGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: GVLDLRGPDDAD*DVLLTLAVGQV
Trigger: AACCTGGCCAACTGCCAGCGTGAGAAGGACATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp CGTCCGCACAGGTCATGGCACTCAATTCACAGATTTTaGCGTAGAAGCCGGGTGGGCAGGTACAGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: RPHRSWHSIHRF*RRSRVGRYRSS
Trigger: GCTACTCCTGTACCTGCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGAGTGCCATGACCTGTGCGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 72 bp TGGTCCCCGTGGAAGTCCGCCTTCTTGTTGGTGTTCTaGATCTGCGTGGCCCCGATGATGCTGACTGAGATG +
Preference number: 6 (lower is better)
Translates to: WSPWKSAFLLVF*ICVAPMMLTEM
Trigger: CATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp GCAGGAGAGGGAGGGGGAGAAAGAGAAAGAGAGAGAGTCCAGAGATaGAGCTTAATTCCCAAGAGAGCTGCAGAGCTTCCTCCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: AGEGGGERERERVQR*SLIPKRAAELPPEP
Trigger: CGGCTCGGGAGGAAGCTCTGCAGCTCTCTTGGGAATTAAGCTCAATCTCTGGACTCTCTCTCTTTCTCTTTCTCCCCCTCCCTCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS TCA 72 bp TCTCCGGTGTCACAGCAAAGATCCGCGTCTTTCCGATaGATCCAGCCAATGCCATCCAGTACACACGCGCAG +
Preference number: 6 (lower is better)
Translates to: SPVSQQRSASFR*IQPMPSSTHAQ
Trigger: CTGCGCGTGTGTACTGGATGGCATTGGCTGGATTCATCGGAAAGACGCGGATCTTTGCTGTGACACCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366756.4
CDS GCA 72 bp CCGTGGAAGTCCGCCTTCTTGTTGGTGTTCTTGATCTaGGTGGCCCCGATGATGCTGACTGAGATGTCCTTC +
Preference number: 6 (lower is better)
Translates to: PWKSAFLLVFLI*VAPMMLTEMSF
Trigger: GAAGGACATCTCAGTCAGCATCATCGGGGCCACGCAGATCAAGAACACCAACAAGAAGGCGGACTTCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 72 bp CCCTGCCAGCCCACTCTGCACTTGCATTCCCCTGGTTaGTCACAAAATCCATGCTGCTCATCACATCCAGGC +
Preference number: 6 (lower is better)
Translates to: PCQPTLHLHSPG*SQNPCCSSHPG
Trigger: GCCTGGATGTGATGAGCAGCATGGATTTTGTGACAAACCAGGGGAATGCAAGTGCAGAGTGGGCTGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 72 bp GGCACTCAATTCACAGATTTTGCCGTAGAAGCCGGGTaGGCAGGTACAGGAGTAGCTGTTCTCGAGATCCGT +
Preference number: 6 (lower is better)
Translates to: GTQFTDFAVEAG*AGTGVAVLEIR
Trigger: ACGGATCTCGAGAACAGCTACTCCTGTACCTGCCCACCCGGCTTCTACGGCAAAATCTGTGAATTGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS GCA 72 bp CACTTGCATTCCCCTGGTTTGTCACAAAATCCATGCTaGTCATCACATCCAGGCAGGCAGATCGGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: HLHSPGLSQNPC*SSHPGRQIGSV
Trigger: CACAGAGCCGATCTGCCTGCCTGGATGTGATGAGCAGCATGGATTTTGTGACAAACCAGGGGAATGCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 72 bp TCCTTCTCCTCGGATATGACGTACACCGACTGGTACTaGGTGTCTTTTGAAGTTGAACAGCCCGAGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SFSSDMTYTDWY*VSFEVEQPESG
Trigger: GCCGGACTCGGGCTGTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CAA 90 bp ACGCACTCATCCTTCTCCTCGGATATGACGTACACCGACTGGTACTaGGTGTCTTTTGAAGTTGAACAGCCCGAGTCCGGCCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: THSSFSSDMTYTDWY*VSFEVEQPESGLFL
Trigger: AAGAAAAAGGCCGGACTCGGGCTGTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGGATGAGTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS CCA 72 bp CACTCATCCTTCTCCTCGGATATGACGTACACCGACTaGTACTTGGTGTCTTTTGAAGTTGAACAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: HSSFSSDMTYTD*YLVSFEVEQPE
Trigger: CTCGGGCTGTTCAACTTCAAAAGACACCAAGTACCAGTCGGTGTACGTCATATCCGAGGAGAAGGATGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2
CDS TCA 72 bp ACCGAGGTCCACACACTTGGCACCATTAGAACAGGGTaGAGAGCTGCAGTAGTCAATTTTCTTCTCACAGTT +
Preference number: 6 (lower is better)
Translates to: TEVHTLGTIRTG*RAAVVNFLLTV
Trigger: AACTGTGAGAAGAAAATTGACTACTGCAGCTCTTCACCCTGTTCTAATGGTGCCAAGTGTGTGGACCTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366756.4
ENST00000616526.2