RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DKC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130826

Ensembl transcript IDs: ENST00000369550.10, ENST00000412124.5, ENST00000413910.5, ENST00000426673.5, ENST00000437719.5, ENST00000452771.5, ENST00000473552.1, ENST00000475423.1, ENST00000475966.1, ENST00000481062.1, ENST00000484317.5, ENST00000620277.4

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTAGAGTCCCACGAGCCAGACTAGAAAGGGATAACTGTCTGCCGTaGAGGCCCACACCCCTAACTGGCCTGGGCAGCCAAAATCTCACG +
Preference number: 1 (lower is better)
Translates to: SRVPRARLERDNCLP*RPTPLTGLGSQNLT
Trigger: CGTGAGATTTTGGCTGCCCAGGCCAGTTAGGGGTGTGGGCCTGCACGGCAGACAGTTATCCCTTTCTAGTCTGGCTCGTGGGACTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR CCA 90 bp TGTTCCTCACCTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTaGGCTCTACCTTCCCATCCTCACCTGTTGTTGACATACTCCTGC +
Preference number: 1 (lower is better)
Translates to: CSSPVVHVLLRPDGK*ALPSHPHLLLTYSC
Trigger: GCAGGAGTATGTCAACAACAGGTGAGGATGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGGTGAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR GCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTaGGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAAC +
Preference number: 1 (lower is better)
Translates to: MQTRTTMLRQPLADS*GQLLGLKVRLPNSN
Trigger: GTTTGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR CCA 90 bp GTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATaGTCGCAGGTAGAGATGACCGCTGTGGTCATTAATGCAATAGCC +
Preference number: 1 (lower is better)
Translates to: VSLSMITLLILATIP*SQVEMTAVVINAIA
Trigger: GGCTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR TCA 90 bp GCCTTCTTGTCCTTCTTACTCTTCTTCTTTTCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCACTCTCT +
Preference number: 1 (lower is better)
Translates to: AFLSFLLFFFSFLIN*GAAGGVSSLSLSLS
Trigger: AGAGAGTGAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAGAAGAAGAGTAAGAAGGACAAGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR TCA 90 bp CAGCTTTGGCCTTCTTGTCCTTCTTACTCTTCTTCTTTTCCTTCTTaGTCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCT +
Preference number: 1 (lower is better)
Translates to: QLWPSCPSYSSSFPS*STEELLEESRHFHS
Trigger: AGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAGAAGAAGAGTAAGAAGGACAAGAAGGCCAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR GCA 90 bp AGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTTTGAGGAAGTaGAAAGGACTGACCTCTAGGCCAGAACAAGATGGAAAACTACCA +
Preference number: 1 (lower is better)
Translates to: SQMDLGEHCTQALRK*KGLTSRPEQDGKLP
Trigger: TGGTAGTTTTCCATCTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTCACCTAAATCCATCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR CCA 90 bp ACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAACAGAGAAGTCATTaGGATAAACTCTGCCTCTTTCATCTTTCACCACCCATATCCTTA +
Preference number: 1 (lower is better)
Translates to: TGSEGEASQLKQRSH*DKLCLFHLSPPISL
Trigger: TAAGGATATGGGTGGTGAAAGATGAAAGAGGCAGAGTTTATCCCAATGACTTCTCTGTTTGAGTTGGGAAGCCTCACCTTCAGACCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR GCA 90 bp GGTGAGGCTTCCCAACTCAAACAGAGAAGTCATTGGGATAAACTCTaGCTCTTTCATCTTTCACCACCCATATCCTTAAAACAGGACAAG +
Preference number: 1 (lower is better)
Translates to: GEASQLKQRSHWDKL*LFHLSPPISLKQDK
Trigger: CTTGTCCTGTTTTAAGGATATGGGTGGTGAAAGATGAAAGAGGCAGAGTTTATCCCAATGACTTCTCTGTTTGAGTTGGGAAGCCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR TCA 90 bp GGTAGCAATAGGTCAAATTCACTGAATGGCTTTCCAGGGCAGTACTaGTGTTATGTAGTGTTATCTGGCAAGTCTAAAGCCACCATCAAA +
Preference number: 1 (lower is better)
Translates to: GSNRSNSLNGFPGQY*CYVVLSGKSKATIK
Trigger: TTTGATGGTGGCTTTAGACTTGCCAGATAACACTACATAACATCAGTACTGCCCTGGAAAGCCATTCAGTGAATTTGACCTATTGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR TCA 90 bp CAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTaGATTCAGAGACAAAATTCAGTGACACTCTTCTACCACTTATTT +
Preference number: 1 (lower is better)
Translates to: QAYNPDTSMDKTQLY*IQRQNSVTLFYHLF
Trigger: AAATAAGTGGTAGAAGAGTGTCACTGAATTTTGTCTCTGAATTCAGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CCA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGACTCCTGCGTCCAGATaGCAAGTGGGCTCTACCTTC +
Preference number: 2 (lower is better)
Translates to: SHSLASASQFLLLRQLPATPASR*QVGSTF
Trigger: GAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGT...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
3UTR-3UTR GCA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGTTGTCCATGTACTCCTaGGTCCAGATGGCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: SHSLASASQFLLLRQLPALSMYS*VQMASG
Trigger: CCCACTTGCCATCTGGACGCAGGAGTACATGGACAA...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
3UTR-3UTR GCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCATTGTCCATGTACTCCTaGGTCCAGATGGCAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSLSMYS*VQMASG
Trigger: CCCACTTGCCATCTGGACGCAGGAGTACATGGACAA...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR TCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCACAGGACAAGATGGGATaGCCACACCAGGTAACATCA +
Preference number: 2 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSQDKMG*PHQVTS
Trigger: TGATGTTACCTGGTGTGGTCATCCCATCTTGTCCTG...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR GCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTCCACTAGCAGACAGCTaGGGACAGTTACTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSPLADS*GQLLGL
Trigger: CAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGG...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGCAGGTGTGCTGTCTGTaGGCTTCCCATGCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASQVCCL*ASHACP
Trigger: TGGACAAGCATGGGAAGCCCACAGACAGCACACCTG...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR TCA 90 bp AGACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCAGGACAAGATGGGATaGCCACACCAGGTAACATCA +
Preference number: 2 (lower is better)
Translates to: RQPLADSCGQLLGLKVRLQDKMG*PHQVTS
Trigger: TGATGTTACCTGGTGTGGTCATCCCATCTTGTCCTG...AAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR GCA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTTCTGTGGGCTTCCCATaGTTGTCCAGAAGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTSVGFP*LSRRPC
Trigger: GCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGA...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTATCAAGGCAGCAAGTGTaGCGTCTCTACCCACCCCGG +
Preference number: 2 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLSRQQV*RLYPPR
Trigger: CCGGGGTGGGTAGAGACGGCACACTTGCTGCCTTGA...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR CCA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACGGGAGCTGAAGAGCTaGTTCCTGTGGTCCTGCATT +
Preference number: 2 (lower is better)
Translates to: EHCTQALRKCKGLTSRPERELKS*FLWSCI
Trigger: AATGCAGGACCACAGGAACCAGCTCTTCAGCTCCCG...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR TCA 90 bp GTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCATAACCACAATCTCCTaGTTGACCTCAATGCCGTCC +
Preference number: 2 (lower is better)
Translates to: VTFTLTLSLPLRSFCCFGITTIS*LTSMPS
Trigger: GGACGGCATTGAGGTCAATCAGGAGATTGTGGTTAT...GCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR GCA 90 bp AACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAATGTCCGAATGTAGGTaGCAGCCTCACAACTCACCC +
Preference number: 2 (lower is better)
Translates to: NEPSEAPASDHQLPITNQMSECR*QPHNSP
Trigger: GGGTGAGTTGTGAGGCTGGCACCTACATTCGGACAT...TTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
3UTR-3UTR GCA 90 bp CAAAATCTCACGGGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTGCTCTACAACCTCCATaGTCACCTGTTCCTCACCTG +
Preference number: 2 (lower is better)
Translates to: QNLTGAEELVPVVLHLASALQPP*SPVPHL
Trigger: CAGGTGAGGAACAGGTGAGCATGGAGGTTGTAGAGC...ACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCCCGTGAGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR TCA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTGGAAGTGCAAAGGACTaGCCTCTAGGCCAGAACAAG +
Preference number: 2 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAGSAKD*PLGQNK
Trigger: CTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCC...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR TCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGCTTACTGTTGCAGACTaGCTCCCTCTAGAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRLTVAD*LPLESH
Trigger: GTGGGACTCTAGAGGGAGTCAGTCTGCAACAGTAAG...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR GCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCCCGCTTCGCAGTTTTTaGTGCTTCGGCAACTACCTG +
Preference number: 2 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSPLRSF*CFGNYL
Trigger: CAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGG...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR CCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCCAACTGAGGAGCTGCTaGAGGAGTCTCGTCACTTTC +
Preference number: 2 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSQLRSC*RSLVTF
Trigger: GAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTG...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR TCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAATCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTC +
Preference number: 2 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQSFLIN*GAAGGV
Trigger: GACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGA...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR GCA 90 bp AGTTTCTCCTCCAGCTTCAAGTGGCCTTCACTACTCAGAAACCAATTCTACCTCGCTTCGGCAACTACCTaGGGGGCTTTTACCACTTCA +
Preference number: 2 (lower is better)
Translates to: SFSSSFKWPSLLRNQFYLASATT*GAFTTS
Trigger: TGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGC...GAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTGAAGCTGGAGGAGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR CAA 90 bp GGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTTaGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAAGATGGA +
Preference number: 2 (lower is better)
Translates to: GTSSQMDLGEHCTQA*RKCKGLTSRPEQDG
Trigger: TCCATCTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR GCA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTGTAGCAGCTAAAATGTaGCAGAACTCTTCACCCTGT +
Preference number: 2 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAVAAKM*QNSSPC
Trigger: ACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTAC...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR GCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGGTAGCAGCTAAAATGTaGCAGAACTCTTCACCCTGT +
Preference number: 2 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQVAAKM*QNSSPC
Trigger: ACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTAC...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAAACCCAGACACCAGCATaGACAAAACTCAGTTATACT +
Preference number: 2 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKTQTPA*TKLSYT
Trigger: AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGT...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAATCTTCTTCTTCTTCTTaGTGGTATCACTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKSSSSS*WYHCPH
Trigger: ATGGGGACAGTGATACCACCAAGAAGAAGAAGAAGA...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR TCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTAGAGACAAAATTCAGTaGCACTCTTCTACCACTTAT +
Preference number: 2 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSRDKIQ*HSSTTY
Trigger: ATAAGTGGTAGAAGAGTGTCACTGAATTTTGTCTCT...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR GCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAACATTGGGATAAACTCTaGCTCTTTCATCTTTCACCA +
Preference number: 2 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQHWDKL*LFHLSP
Trigger: TGGTGAAAGATGAAAGAGGCAGAGTTTATCCCAATG...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CCA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAAAAACAGAGAAGTCATTaGGATAAACTCTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: EHCTQALRKCKGLTSRPEKQRSH*DKLCLF
Trigger: AAAGAGGCAGAGTTTATCCCAATGACTTCTCTGTTT...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR CAA 90 bp CAGCTTCAAGTGGCCTTCACTACTCAGAAACCAATTCTACCTCTTTaGCTTTCTTCTTCTTCTTCTTCTTCTTGGTGGTATCACTGTCCC +
Preference number: 2 (lower is better)
Translates to: QLQVAFTTQKPILPL*LSSSSSSSWWYHCP
Trigger: GGGACAGTGATACCACCAAGAAGAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR GCA 72 bp CCACGAGCCAGACTAGAAAGGGATAACTGTCTGCCGTaGAGGCCCACACCCCTAACTGGCCTGGGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: PRARLERDNCLP*RPTPLTGLGSQ
Trigger: TTGGCTGCCCAGGCCAGTTAGGGGTGTGGGCCTGCACGGCAGACAGTTATCCCTTTCTAGTCTGGCTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR-3UTR CAA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGGTGGGCTTCCCATGCTaGTCCAGAAGGCCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: RHFHSHSLASASQFLLLRVGFPC*SRRPCL
Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCAC...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR CAA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCTTGGCAGACTCACTGTaGTCCATGTACTCCTGCGTC +
Preference number: 3 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGLADSL*SMYSCV
Trigger: GACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426673.5
3UTR GCA 72 bp TGCTCACCTGTTCCTCACCTGTTGTCCATGTACTCCTaGGTCCAGATGGCAAGTGGGCTCTACCTTCCCATC +
Preference number: 3 (lower is better)
Translates to: CSPVPHLLSMYS*VQMASGLYLPI
Trigger: GATGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGGTGAGGAACAGGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR GCA 72 bp AGGACTACGATGTTAAGACAACCACTAGCAGACAGCTaGGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: RTTMLRQPLADS*GQLLGLKVRLP
Trigger: GGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR TCA 72 bp ATGACTCCAGAACGAACCCTCCGAAGCTCCTGCATCTaGCCACCAACTCCCAATAACAAACCAAGGTGCACA +
Preference number: 3 (lower is better)
Translates to: MTPERTLRSSCI*PPTPNNKPRCT
Trigger: TGTGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTTCTGGAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
3UTR-3UTR CAA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGATCACTCTCTTGATCTaGGCTACTATACCATGGTCG +
Preference number: 3 (lower is better)
Translates to: RHFHSHSLASASQFLLLRITLLI*ATIPWS
Trigger: CGACCATGGTATAGTAGCCAAGATCAAGAGAGTGAT...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR CAA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACACTGTACACAAGCTTaGAGGAAGTGCAAAGGACTG +
Preference number: 3 (lower is better)
Translates to: EHCTQALRKCKGLTSRPEHCTQA*RKCKGL
Trigger: CAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR-3UTR CAA 90 bp TCAGCTTCTTCTGACTTGCCTTTGGACCTAAACCCCACTTCCGAGGGTAAGTGTCAGATTGCTTCTCCTTaGGTGGTGATAACCACAATC +
Preference number: 3 (lower is better)
Translates to: SASSDLPLDLNPTSEGKCQIASP*VVITTI
Trigger: GATTGTGGTTATCACCACCAAAGGAGAAGCAATCTG...ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR-3UTR CAA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCTCCATGATCACTCTCTaGATCTTGGCTACTATACCA +
Preference number: 3 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLSMITL*ILATIP
Trigger: TGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR GCA 72 bp GATTTAGGTGAGCACTGTACACAAGCTTTGAGGAAGTaGAAAGGACTGACCTCTAGGCCAGAACAAGATGGA +
Preference number: 3 (lower is better)
Translates to: DLGEHCTQALRK*KGLTSRPEQDG
Trigger: TCCATCTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTCACCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
3UTR GCA 72 bp ACAAACCAAGGTGCACACATAATGTCCGAATGTAGGTaGCAGCCTCACAACTCACCCAAAAGATTCCTAATC +
Preference number: 3 (lower is better)
Translates to: TNQGAHIMSECR*QPHNSPKRFLI
Trigger: GATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTGTGCACCTTGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
3UTR CCA 72 bp TCCATGATCACTCTCTTGATCTTGGCTACTATACCATaGTCGCAGGTAGAGATGACCGCTGTGGTCATTAAT +
Preference number: 3 (lower is better)
Translates to: SMITLLILATIP*SQVEMTAVVIN
Trigger: ATTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
3UTR TCA 72 bp TGTTATCTGGCAAGTCTAAAGCCACCATCAAAATACTaGCGCTGGACAGAAGAACTCACCACTTACTGTTGC +
Preference number: 3 (lower is better)
Translates to: CYLASLKPPSKY*RWTEELTTYCC
Trigger: GCAACAGTAAGTGGTGAGTTCTTCTGTCCAGCGTCAGTATTTTGATGGTGGCTTTAGACTTGCCAGATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCCCTGCACCGCGTGCGTaGCGCCCGGTCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGPAPRA*RPVHSR
Trigger: TCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGG...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAGCACTGCCCTGTGCGTaGCTTGCCGCGGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSALPCA*LAAGRE
Trigger: CTCCCGCCCCGCGGCAAGGCACGCACAGGGCAGTGC...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTCCTGCACCGCGTGCGTaGCGCCCGGTCCACAGCCGA +
Preference number: 4 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSPAPRA*RPVHSR
Trigger: TCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGG...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp AGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAAAGACTCCCGCCGCCTTaGTCCCGTCAGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: SRQLRTVTGSEGEASQLKRLPPP*SRQAAL
Trigger: CAGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCT...TTTGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCACACCCACCCGCGCACTaGCCTGTGCGTGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAHPPAH*PVRALP
Trigger: CGGCAAGGCACGCACAGGGCAGTGCGCGGGTGGGTG...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCATCCGAGGCGCCCGCTaGTCGTCTGCGCAATGCGAT +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASIRGAR*SSAQCD
Trigger: ATCGCATTGCGCAGACGACCAGCGGGCGCCTCGGAT...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAATTACCCTGCACCGCGTaGGTGCCGCCCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKLPCTA*VPPGPQ
Trigger: CTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAA...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAATCCGCCATGTTACCCTaGACCGCGTGCGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKSAMLP*TACVPP
Trigger: GGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGA...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCGATCAACTGAGGAGCTaGTGGAGGAGTCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGDQLRS*WRSLVT
Trigger: AGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATAGACTCCCGCCGCCTTaGTCCCGTCAGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDRLPPP*SRQAAL
Trigger: CAGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCT...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGCAGGTGTGCTGTCTGTaGGCTTCCCATGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLSRFRFAVFAASATTCGQVCCL*ASHACP
Trigger: TGGACAAGCATGGGAAGCCCACAGACAGCACACCTG...CCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCCAACTGAGGAGCTGCTaGAGGAGTCTCGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGQLRSC*RSLVTF
Trigger: GAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTG...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp TCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGGTCCTTTTCACTCATaGCTCCAGAACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSRFRFAVFAASATTCGGPFHS*LQNEPS
Trigger: GGAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACC...CCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTTACCCTGCACCGCGTaGGTGCCGCCCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDLPCTA*VPPGPQ
Trigger: CTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCCACTAGCAGACAGCTaGGGACAGTTACTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASPLADS*GQLLGL
Trigger: CAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGG...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CATCTCCAGGCTCGGCCCCGCTCTCCAGACCAGCTTTGGCCTTCTTGTCCTTCTCAAGCTTTGAGGAAGTaGAAAGGACTGACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HLQARPRSPDQLWPSCPSQALRK*KGLTSR
Trigger: CCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTG...AGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGAGCGGGGCCGAGCCTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp GGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTTTGCCCCAAACCTGGTCGTCTGCGCAATaGGATTTGCTGGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GAEELVPVVLHLASLPQTWSSAQ*DLLARP
Trigger: TGGCCGAGCCAGCAAATCGCATTGCGCAGACGACCA...GGTTTGGGGCAAACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACGCCCGCTGGTCGTCTaGGCAATGCGATTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKRPLVV*AMRFAG
Trigger: GCCAGCAAATCGCATTGCGCAGACGACCAGCGGGCG...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RHFHSHSLASASQFLLLRQATTS*EEGLEG
Trigger: GCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTG...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGCAGGTGTGCTGTCTGTaGGCTTCCCATGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHSLASASQFLLLRQLPAQVCCL*ASHACP
Trigger: TGGACAAGCATGGGAAGCCCACAGACAGCACACCTG...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp ACTCATGACTCCAGAACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCAGCAAAAGGGGCCACTaGGACGTGTCCAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: THDSRTNPPKLLHLTTNSSKRGH*DVSNLA
Trigger: TGCTAAGTTGGACACGTCTCAGTGGCCCCTTTTGCT...GGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTTCTGGAGTCATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGCGAAGCTCCTGCATCTaGCCACCAACTCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: SHSLASASQFLLLRQLPARSSCI*PPTPNN
Trigger: GTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAGGTCCTTTTCACTCATaGCTCCAGAACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSGPFHS*LQNEPS
Trigger: GGAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACC...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGAGTCCCACGAGCCAGACTAGAAAGGGATAACTGTCTGCCGTGCAGGCCCACACCTTCAATAGCATTGTaGAGCCGGACAATCCCCACA +
Preference number: 4 (lower is better)
Translates to: RVPRARLERDNCLPCRPTPSIAL*SRTIPT
Trigger: TGTGGGGATTGTCCGGCTGCACAATGCTATTGAAGG...TGTGGGCCTGCACGGCAGACAGTTATCCCTTTCTAGTCTGGCTCGTGGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGTCTGTGGGCTTCCCATaGTTGTCCAGAAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASSVGFP*LSRRPC
Trigger: GCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGA...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp CAAAATCTCACGGGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTTCAAGGCAGCAAGTGTaGCGTCTCTACCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: QNLTGAEELVPVVLHLASSRQQV*RLYPPR
Trigger: CCGGGGTGGGTAGAGACGGCACACTTGCTGCCTTGA...ACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCCCGTGAGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGGATAACTGTCTGCCGTaGAGGCCCACACCCCTAACT +
Preference number: 4 (lower is better)
Translates to: RHFHSHSLASASQFLLLRDNCLP*RPTPLT
Trigger: AGTTAGGGGTGTGGGCCTGCACGGCAGACAGTTATC...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCGCCTGCACTCTGTTGTaGCTTCACCAAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLACTLL*LHQASG
Trigger: GCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGC...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTCGAAGCTCCTGCATCTaGCCACCAACTCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: HSHSLASASQFLLLRQLPRSSCI*PPTPNN
Trigger: GTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp CCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAGGTGCAGGTCCTTTTCACTCATaGCTCCAGAACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: PSEAPASDHQLPITNQGAGPFHS*LQNEPS
Trigger: GGAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACC...TGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp TTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCCCACAATCTCCTGATTaGCCTCAATGCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LADSLLSMYSCVQMASGLPQSPD*PQCRPH
Trigger: ATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGG...GAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR TCA 90 bp GGTCTCAAAGTAGCAGCTAAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTTACCCACCCCGGCTCTaGAACATCCTGCCCTCACCT +
Preference number: 4 (lower is better)
Translates to: GLKVAAKMCQNSSPCLGPYPPRL*NILPSP
Trigger: AGGTGAGGGCAGGATGTTTCAGAGCCGGGGTGGGTA...AGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTACTTTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp CCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAGGTGCAGAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PSEAPASDHQLPITNQGAELPLY*SNKWGS
Trigger: CGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTC...TGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp ACTCATGACTCCAGAACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCGTCCTCACTCGGAGCTaGCTCTTTACTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: THDSRTNPPKLLHLTTNSVLTRS*LFTAAI
Trigger: TATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGAC...GGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTTCTGGAGTCATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTATGTCCGAATGTAGGTaGCAGCCTCACAACTCACCC +
Preference number: 4 (lower is better)
Translates to: HSHSLASASQFLLLRQLPMSECR*QPHNSP
Trigger: GGGTGAGTTGTGAGGCTGGCACCTACATTCGGACAT...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp TCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGTTGTCCAGAAGGCCCTaGTTGATCATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSRFRFAVFAASATTCGLSRRP*LIISFF
Trigger: GAAGAAGCTGATGATCAAGCAGGGCCTTCTGGACAA...CCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp TTTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTGCTTCGGCAACTACCTaGGGGGCTTTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: FGRLTVVHVLLRPDGKWAASATT*GAFTTS
Trigger: TGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGC...AGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR GCA 90 bp GTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCCTTCGCAGTTTTTGCTaGTTCGGCAACTACCTGCGG +
Preference number: 4 (lower is better)
Translates to: VTFTLTLSLPLRSFCCFGLRSFC*FGNYLR
Trigger: CCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAG...GCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp TTTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCCGCTTCGCAGTTTTTaGTGCTTCGGCAACTACCTG +
Preference number: 4 (lower is better)
Translates to: FGRLTVVHVLLRPDGKWAPLRSF*CFGNYL
Trigger: CAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGG...AGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR GCA 90 bp AGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAAGATCAACTGAGGAGCTaGTGGAGGAGTCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: SRQLRTVTGSEGEASQLKDQLRS*WRSLVT
Trigger: AGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC...TTTGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCGTAGCAGCTAAAATGTaGCAGAACTCTTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGVAAKM*QNSSPC
Trigger: ACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTAC...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp GTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCTTGTCCATGTACTCCTaGGTCCAGATGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTFTLTLSLPLRSFCCFGLSMYS*VQMASG
Trigger: CCCACTTGCCATCTGGACGCAGGAGTACATGGACAA...GCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp ACTCATGACTCCAGAACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCAACAACCAGTCACCTTaGGATCCAGCGTACCACTGT +
Preference number: 4 (lower is better)
Translates to: THDSRTNPPKLLHLTTNSNNQSP*DPAYHC
Trigger: ACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTT...GGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTTCTGGAGTCATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp AGAGTCCCACGAGCCAGACTAGAAAGGGATAACTGTCTGCCGTGCAGGCCCACATTGGCTACTATACCATaGTCGCAGGTAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: RVPRARLERDNCLPCRPTLATIP*SQVEMT
Trigger: GGTCATCTCTACCTGCGACCATGGTATAGTAGCCAA...TGTGGGCCTGCACGGCAGACAGTTATCCCTTTCTAGTCTGGCTCGTGGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTGAGGAGCTGCTaGAGGAGTCTCGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RHFHSHSLASASQFLLLRQLRSC*RSLVTF
Trigger: GAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTG...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGGCCTGCACTCTGTTGTaGCTTCACCAAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRACTLL*LHQASG
Trigger: GCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGC...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp GCACACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCGCCTGCACTCTGTTGTaGCTTCACCAAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AHIMSECRCQPHNSPKRFACTLL*LHQASG
Trigger: GCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGC...GAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp AGACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCACAATCTCCTGATTaGCCTCAATGCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RQPLADSCGQLLGLKVRLPQSPD*PQCRPH
Trigger: ATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGG...AAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGTCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASSFLIN*GAAGGV
Trigger: GACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGA...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAATCCAGCGTACCACTGTaGCCTGTCTTCTCCACCCGA +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQSSVPL*PVFSTR
Trigger: TCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGA...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCATCCCCACATACTCTTTaGCTGCACTCTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSSPHTL*LHSVVT
Trigger: AGTCACAACAGAGTGCAGGCAAAGAGTATGTGGGGA...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTATGTCCGAATGTAGGTaGCAGCCTCACAACTCACCC +
Preference number: 4 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSMSECR*QPHNSP
Trigger: GGGTGAGTTGTGAGGCTGGCACCTACATTCGGACAT...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTTCTGTGGGCTTCCCATaGTTGTCCAGAAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTSVGFP*LSRRPC
Trigger: GCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGA...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp TGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTGATTGACCTCAATGCCGTCTCTGTGGGCTTCCCATaGTTGTCCAGAAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CFSFGGDNHNLLIDLNAVSVGFP*LSRRPC
Trigger: GCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGA...GACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: HSHSLASASQFLLLRQLPISGGR*NKAPVR
Trigger: TCTGACAGGTGCCTTATTCCAGCGACCCCCACTTAT...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412124.5
ENST00000620277.4
CDS-3UTR CCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCTGGCCCCATAGCAGATaGCATTTACTGCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASWPHSR*HLLHCL
Trigger: AAGACAGTGCAGTAAATGCCATCTGCTATGGGGCCA...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTGGCCCCATAGCAGATaGCATTTACTGCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: LADSLLSMYSCVQMASGLWPHSR*HLLHCL
Trigger: AAGACAGTGCAGTAAATGCCATCTGCTATGGGGCCA...GAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR CCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCATTGGCTACTATACCATaGTCGCAGGTAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSLATIP*SQVEMT
Trigger: GGTCATCTCTACCTGCGACCATGGTATAGTAGCCAA...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp CTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTCCCATCTTGGCTACTATACCATaGTCGCAGGTAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: LLSMYSCVQMASGLYLPILATIP*SQVEMT
Trigger: GGTCATCTCTACCTGCGACCATGGTATAGTAGCCAA...GATGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCACTCCTGCGTCCAGATaGCAAGTGGGCTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLTPASR*QVGSTF
Trigger: GAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGT...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCACGGGAGCTGAAGAGCTaGTTCCTGTGGTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPARELKS*FLWSCI
Trigger: AATGCAGGACCACAGGAACCAGCTCTTCAGCTCCCG...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp AACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAACGAAGCTCCTGCATCTaGCCACCAACTCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: NEPSEAPASDHQLPITNQRSSCI*PPTPNN
Trigger: GTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG...TTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGCCACAATCTCCTGATTaGCCTCAATGCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASPQSPD*PQCRPH
Trigger: ATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGG...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTCCACAATCTCCTGATTaGCCTCAATGCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSPQSPD*PQCRPH
Trigger: ATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGG...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTATAACCACAATCTCCTaGTTGACCTCAATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HSHSLASASQFLLLRQLPITTIS*LTSMPS
Trigger: GGACGGCATTGAGGTCAATCAGGAGATTGTGGTTAT...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp TACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YQAHQAYNPDTSMDKTQLSFLIN*GAAGGV
Trigger: GACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGA...TAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TCAGCTTCTTCTGACTTGCCTTTGGACCTAAACCCCACTTCCGAGGGTAAGTGTTCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SASSDLPLDLNPTSEGKCSFLIN*GAAGGV
Trigger: GACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGA...ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR TCA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAATCCTTCTTGATCAACTaGGGAGCTGCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: EHCTQALRKCKGLTSRPESFLIN*GAAGGV
Trigger: GACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGA...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCTCTTCTTTTCCTTCTTaGTCAACTGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASSSFPS*STEELL
Trigger: CAGCAGCTCCTCAGTTGATCAAGAAGGAAAAGAAGA...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp AACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGGAAGTGCAAAGGACTaGCCTCTAGGCCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: NKMENYQAHQAYNPDTSMGSAKD*PLGQNK
Trigger: CTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCC...CATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTATCCAGCGTACCACTGTaGCCTGTCTTCTCCACCCGA +
Preference number: 4 (lower is better)
Translates to: HIMSECRCQPHNSPKRFLSSVPL*PVFSTR
Trigger: TCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGA...TAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTCCAGCGTACCACTGTaGCCTGTCTTCTCCACCCGA +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDSSVPL*PVFSTR
Trigger: TCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAGAGTGGCTCGTTCTATaGACACGATTAAACAACCAG +
Preference number: 4 (lower is better)
Translates to: LADSCGQLLGLKVRLPNSEWLVL*TRLNNQ
Trigger: CTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTC...TGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTCATGACTCCAGAACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCGAGTGGCTCGTTCTATaGACACGATTAAACAACCAG +
Preference number: 4 (lower is better)
Translates to: THDSRTNPPKLLHLTTNSEWLVL*TRLNNQ
Trigger: CTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTC...GGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTTCTGGAGTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp AGACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTTCCCCACATACTCTTTaGCTGCACTCTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: RQPLADSCGQLLGLKVRLSPHTL*LHSVVT
Trigger: AGTCACAACAGAGTGCAGGCAAAGAGTATGTGGGGA...AAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATATGTCCGAATGTAGGTaGCAGCCTCACAACTCACCC +
Preference number: 4 (lower is better)
Translates to: TRPIRPITQTPAWTKLSYMSECR*QPHNSP
Trigger: GGGTGAGTTGTGAGGCTGGCACCTACATTCGGACAT...ATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTGCATCAAGCACATCATaGATTGTCACCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RLTVVHVLLRPDGKWALPASSTS*IVTMWS
Trigger: GGACCACATGGTGACAATGCATGATGTGCTTGATGC...AGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR GCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAAGCTTCGGCAACTACCTaGGGGGCTTTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKASATT*GAFTTS
Trigger: TGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGC...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCCCACTAGCAGACAGCTaGGGACAGTTACTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSPLADS*GQLLGL
Trigger: CAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGG...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATTTGTCCATGTACTCCTaGGTCCAGATGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TRPIRPITQTPAWTKLSYLSMYS*VQMASG
Trigger: CCCACTTGCCATCTGGACGCAGGAGTACATGGACAA...ATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCTCACCACTTACTGTTaGAGACTGACTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: RHFHSHSLASASQFLLLRLTTYC*RLTPSR
Trigger: TCTAGAGGGAGTCAGTCTGCAACAGTAAGTGGTGAG...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLQATTS*EEGLEG
Trigger: GCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTG...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp ATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAATCTTCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGC +
Preference number: 4 (lower is better)
Translates to: MSECRCQPHNSPKRFLIFQATTS*EEGLEG
Trigger: GCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTG...GAAGATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp TCAGCTTCTTCTGACTTGCCTTTGGACCTAAACCCCACTTCCGAGGGTAAGTGTTTTTGCTCTCGTAGATaGTCCTCACTCGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SASSDLPLDLNPTSEGKCFCSRR*SSLGAA
Trigger: GGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAA...ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp GTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCTGGCCCCATAGCAGATaGCATTTACTGCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: VTFTLTLSLPLRSFCCFGWPHSR*HLLHCL
Trigger: AAGACAGTGCAGTAAATGCCATCTGCTATGGGGCCA...GCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp ACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACTGCAGGTGTGCTGTCTGTaGGCTTCCCATGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRTTMLRQPLADSCGQLLQVCCL*ASHACP
Trigger: TGGACAAGCATGGGAAGCCCACAGACAGCACACCTG...CAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTGATTGACCTCAATGCCGTCCAGGTGTGCTGTCTGTaGGCTTCCCATGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSFGGDNHNLLIDLNAVQVCCL*ASHACP
Trigger: TGGACAAGCATGGGAAGCCCACAGACAGCACACCTG...GACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCCCACACCCCTAACTaGCCTGGGCAGCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQAHTPN*PGQPKS
Trigger: AGATTTTGGCTGCCCAGGCCAGTTAGGGGTGTGGGC...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGCGAAGCTCCTGCATCTaGCCACCAACTCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRRSSCI*PPTPNN
Trigger: GTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGGGTCCTTTTCACTCATaGCTCCAGAACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRGPFHS*LQNEPS
Trigger: GGAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACC...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCATCATCAGCTTCTTCTaGCTTGCCTTTGGACCTAAA +
Preference number: 4 (lower is better)
Translates to: LADSLLSMYSCVQMASGLIISFF*LAFGPK
Trigger: TTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGAT...GAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR TCA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAGGACAAGATGGGATaGCCACACCAGGTAACATCA +
Preference number: 4 (lower is better)
Translates to: EHCTQALRKCKGLTSRPEQDKMG*PHQVTS
Trigger: TGATGTTACCTGGTGTGGTCATCCCATCTTGTCCTG...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTGGAAGTGCAAAGGACTaGCCTCTAGGCCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTGSAKD*PLGQNK
Trigger: CTTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCC...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTCCCATCTTTTGGCAGACTCACTaGAAAAGAGGTAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: LLSMYSCVQMASGLYLPIFWQTH*KRGSNR
Trigger: CCTATTGCTACCTCTTTTTCAGTGAGTCTGCCAAAA...GATGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGGAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQELPLY*SNKWGS
Trigger: CGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTC...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp TGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTGATTGACCTCAATGCCGTCGAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: CFSFGGDNHNLLIDLNAVELPLY*SNKWGS
Trigger: CGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTC...GACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR GCA 90 bp ACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACTGGAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TRTTMLRQPLADSCGQLLELPLY*SNKWGS
Trigger: CGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTC...CAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAGTCCTCACTCGGAGCTaGCTCTTTACTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAVLTRS*LFTAAI
Trigger: TATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGAC...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGAATAGCCATGCAGATTaGTTCTCCTTTGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SHSLASASQFLLLRQLPANSHAD*FSFGGD
Trigger: ATCACCACCAAAGGAGAAGCAATCTGCATGGCTATT...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGTTGTCCAGAAGGCCCTaGTTGATCATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASLSRRP*LIISFF
Trigger: GAAGAAGCTGATGATCAAGCAGGGCCTTCTGGACAA...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTGCTTCGGCAACTACCTaGGGGGCTTTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTASATT*GAFTTS
Trigger: TGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGC...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp TGGTCGCAGGTAGAGATGACCGCTGTGGTCATTAATGCAATAGCCATGCAGATTCTTCGCAGTTTTTGCTaGTTCGGCAACTACCTGCGG +
Preference number: 4 (lower is better)
Translates to: WSQVEMTAVVINAIAMQILRSFC*FGNYLR
Trigger: CCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAG...AATCTGCATGGCTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR GCA 90 bp ACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACTGCTTCGCAGTTTTTGCTaGTTCGGCAACTACCTGCGG +
Preference number: 4 (lower is better)
Translates to: TRTTMLRQPLADSCGQLLLRSFC*FGNYLR
Trigger: CCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAG...CAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTCCGCTTCGCAGTTTTTaGTGCTTCGGCAACTACCTG +
Preference number: 4 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAPLRSF*CFGNYL
Trigger: CAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGG...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp GGTCTCAAAGTAGCAGCTAAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTGATCAACTGAGGAGCTaGTGGAGGAGTCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: GLKVAAKMCQNSSPCLGPDQLRS*WRSLVT
Trigger: AGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC...AGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTACTTTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTGTAGCAGCTAAAATGTaGCAGAACTCTTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: RQPLADSCGQLLGLKVRLVAAKM*QNSSPC
Trigger: ACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTAC...AAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTCAAGCTTTGAGGAAGTaGAAAGGACTGACCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSQALRK*KGLTSR
Trigger: CCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTG...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGGCTCTACAACCTCCATaGTCACCTGTTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRALQPP*SPVPHL
Trigger: CAGGTGAGGAACAGGTGAGCATGGAGGTTGTAGAGC...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAAATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKISGGR*NKAPVR
Trigger: TCTGACAGGTGCCTTATTCCAGCGACCCCCACTTAT...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp ACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACTGTTTTGCTCTCGTAGATaGTCCTCACTCGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRTTMLRQPLADSCGQLLFCSRR*SSLGAA
Trigger: GGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAA...CAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCTTTTGCTCTCGTAGATaGTCCTCACTCGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSFCSRR*SSLGAA
Trigger: GGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAA...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTGCATTGTCACCATGTaGTCCTTTTCACTCATGACT +
Preference number: 4 (lower is better)
Translates to: LADSLLSMYSCVQMASGLCIVTM*SFSLMT
Trigger: AGTCATGAGTGAAAAGGACCACATGGTGACAATGCA...GAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR CCA 90 bp CTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTCCCATCTGCATTGTCACCATGTaGTCCTTTTCACTCATGACT +
Preference number: 4 (lower is better)
Translates to: LLSMYSCVQMASGLYLPICIVTM*SFSLMT
Trigger: AGTCATGAGTGAAAAGGACCACATGGTGACAATGCA...GATGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp GTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCATATCGAAGAACACCTaGAAGCATAATCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VTFTLTLSLPLRSFCCFGISKNT*KHNLGP
Trigger: GGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATAT...GCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTCAACTGAGGAGCTGCTaGAGGAGTCTCGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTQLRSC*RSLVTF
Trigger: GAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTG...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCACCCAGACACCAGCATaGACAAAACTCAGTTATACT +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASTQTPA*TKLSYT
Trigger: AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGT...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTAACTCCTGCGTCCAGATaGCAAGTGGGCTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLTPASR*QVGSTF
Trigger: GAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGT...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAAGCAAAAGGGGCCACTaGGACGTGTCCAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQSKRGH*DVSNLA
Trigger: TGCTAAGTTGGACACGTCTCAGTGGCCCCTTTTGCT...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGTTATCATACAGCCACTaGGCATCAAGCACATCATGC +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASLSYSH*ASSTSC
Trigger: GCATGATGTGCTTGATGCTCAGTGGCTGTATGATAA...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp TTTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTATAACCAGCCGTTTATaGGATGTCAACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FGRLTVVHVLLRPDGKWAITSRL*DVNSFS
Trigger: GGAAAAGCTGTTGACATCTCATAAACGGCTGGTTAT...AGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR TCA 90 bp GAAGAACTCACCACTTACTGTTGCAGACTGACTCCCTCTAGAGTCCCACGAGCCATCATCAGCTTCTTCTaGCTTGCCTTTGGACCTAAA +
Preference number: 4 (lower is better)
Translates to: EELTTYCCRLTPSRVPRAIISFF*LAFGPK
Trigger: TTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGAT...GGCTCGTGGGACTCTAGAGGGAGTCAGTCTGCAACAGTAAGTGGTGAGTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTCAGGACAAGATGGGATaGCCACACCAGGTAACATCA +
Preference number: 4 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAQDKMG*PHQVTS
Trigger: TGATGTTACCTGGTGTGGTCATCCCATCTTGTCCTG...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTGTCCTCACTCGGAGCTaGCTCTTTACTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTVLTRS*LFTAAI
Trigger: TATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGAC...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412124.5
ENST00000620277.4
CDS-3UTR GCA 90 bp GGTCTCAAAGTAGCAGCTAAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTGTCCTCACTCGGAGCTaGCTCTTTACTGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: GLKVAAKMCQNSSPCLGPVLTRS*LFTAAI
Trigger: TATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGAC...AGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTACTTTGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAGCATCAAGCACATCATaGATTGTCACCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAASSTS*IVTMWS
Trigger: GGACCACATGGTGACAATGCATGATGTGCTTGATGC...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAGCATCAAGCACATCATaGATTGTCACCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NEPSEAPASDHQLPITNQASSTS*IVTMWS
Trigger: GGACCACATGGTGACAATGCATGATGTGCTTGATGC...TTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp TTTGGCAGACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTGCAGATGGCATTTACTaGACTGTCTTTCATAACCAG +
Preference number: 4 (lower is better)
Translates to: FGRLTVVHVLLRPDGKWAADGIY*TVFHNQ
Trigger: CTGGTTATGAAAGACAGTGCAGTAAATGCCATCTGC...AGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTCTGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR GCA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTAATAGCCATGCAGATTaGTTCTCCTTTGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: HSHSLASASQFLLLRQLPNSHAD*FSFGGD
Trigger: ATCACCACCAAAGGAGAAGCAATCTGCATGGCTATT...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCTTGTCCAGAAGGCCCTaGTTGATCATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLLSRRP*LIISFF
Trigger: GAAGAAGCTGATGATCAAGCAGGGCCTTCTGGACAA...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR GCA 90 bp CATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGGTAGAGATGACGCTTCGGCAACTACCTaGGGGGCTTTTACCACTTCA +
Preference number: 4 (lower is better)
Translates to: HDHSLDLGYYTMVAGRDDASATT*GAFTTS
Trigger: TGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGC...GTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACTTCGCAGTTTTTGCTaGTTCGGCAACTACCTGCGG +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLLRSFC*FGNYLR
Trigger: CCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAG...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTACCGCTTCGCAGTTTTTaGTGCTTCGGCAACTACCTG +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLPLRSF*CFGNYL
Trigger: CAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGG...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGGTAGAGATCCGCTTCGCAGTTTTTaGTGCTTCGGCAACTACCTG +
Preference number: 4 (lower is better)
Translates to: LHDHSLDLGYYTMVAGRDPLRSF*CFGNYL
Trigger: CAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGG...ATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR GCA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCATTGGGATAAACTCTaGCTCTTTCATCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASHWDKL*LFHLSP
Trigger: TGGTGAAAGATGAAAGAGGCAGAGTTTATCCCAATG...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGAACAACCAGTCACCTTaGGATCCAGCGTACCACTGT +
Preference number: 4 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQNNQSP*DPAYHC
Trigger: ACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTT...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTAACAACCAGTCACCTTaGGATCCAGCGTACCACTGT +
Preference number: 4 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTNNQSP*DPAYHC
Trigger: ACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTT...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CCA 90 bp GCACACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCACTTCACCAAGCGAGTaGCTCGTTCTATGCACACGA +
Preference number: 4 (lower is better)
Translates to: AHIMSECRCQPHNSPKRFTSPSE*LVLCTR
Trigger: TCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGT...GAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCACTTCACCAAGCGAGTaGCTCGTTCTATGCACACGA +
Preference number: 4 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSTSPSE*LVLCTR
Trigger: TCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGT...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp GTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSLSMITLLILATIPWSQISGGR*NKAPVR
Trigger: TCTGACAGGTGCCTTATTCCAGCGACCCCCACTTAT...CTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTATTTTGCTCTCGTAGATaGTCCTCACTCGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HIMSECRCQPHNSPKRFLFCSRR*SSLGAA
Trigger: GGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAA...TAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGACCCAGACACCAGCATaGACAAAACTCAGTTATACT +
Preference number: 4 (lower is better)
Translates to: RHFHSHSLASASQFLLLRTQTPA*TKLSYT
Trigger: AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGT...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp ACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATTCTCTTCAGAGGATTTaGACCACATGCAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TRPIRPITQTPAWTKLSYSLQRI*TTCKRC
Trigger: ACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGA...ATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTATAACCACAATCTCCTaGTTGACCTCAATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTITTIS*LTSMPS
Trigger: GGACGGCATTGAGGTCAATCAGGAGATTGTGGTTAT...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGATCATCAGCTTCTTCTaGCTTGCCTTTGGACCTAAA +
Preference number: 4 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASIISFF*LAFGPK
Trigger: TTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGAT...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCTCTTCTTTTCCTTCTTaGTCAACTGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLSSFPS*STEELL
Trigger: CAGCAGCTCCTCAGTTGATCAAGAAGGAAAAGAAGA...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426673.5
ENST00000620277.4
CDS-3UTR TCA 90 bp TACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTAATAGGTCAAATTCACTaGATGGCTTTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: YQAHQAYNPDTSMDKTQLIGQIH*MAFQGS
Trigger: ACTGCCCTGGAAAGCCATTCAGTGAATTTGACCTAT...TAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATCCTTCAATAGCATTGTaGAGCCGGACAATCCCCACA +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDPSIAL*SRTIPT
Trigger: TGTGGGGATTGTCCGGCTGCACAATGCTATTGAAGG...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTCCCAAATAACAAACCAAGGTaGACACATAATGTCCGAATG +
Preference number: 4 (lower is better)
Translates to: HCCPCTPASRWQVGSTFPNNKPR*THNVRM
Trigger: CATTCGGACATTATGTGTGCACCTTGGTTTGTTATT...TGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR GCA 90 bp AGGGTAAGTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGATCAACTGAGGAGCTaGTGGAGGAGTCTCGTCACT +
Preference number: 4 (lower is better)
Translates to: RVSVSLHDHSLDLGYYTMDQLRS*WRSLVT
Trigger: AGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC...CATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACACTTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAACTTCACCAAGCGAGTaGCTCGTTCTATGCACACGA +
Preference number: 4 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQTSPSE*LVLCTR
Trigger: TCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGT...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp ACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATATATCGAAGAACACCTaGAAGCATAATCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TRPIRPITQTPAWTKLSYISKNT*KHNLGP
Trigger: GGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATAT...ATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAATATCGAAGAACACCTaGAAGCATAATCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAISKNT*KHNLGP
Trigger: GGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATAT...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTGATTGACCTCAATGCCGTCTTGGCTACTATACCATaGTCGCAGGTAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: CFSFGGDNHNLLIDLNAVLATIP*SQVEMT
Trigger: GGTCATCTCTACCTGCGACCATGGTATAGTAGCCAA...GACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAATCTCCAGACCAGCTTTaGCCTTCTTGTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQSPDQL*PSCPSY
Trigger: GTAAGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGA...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTAATCTTCTTCTGGCAATaGCTTCCGCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YQAHQAYNPDTSMDKTQLIFFWQ*LPLLFL
Trigger: AAGAAAAAGGAGCGGAAGTCATTGCCAGAAGAAGAT...TAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTTCTCTTCAGAGGATTTaGACCACATGCAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTSLQRI*TTCKRC
Trigger: ACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGA...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAAATAACCAGCCGTTTATaGGATGTCAACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKITSRL*DVNSFS
Trigger: GGAAAAGCTGTTGACATCTCATAAACGGCTGGTTAT...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGGTAGAGATATAACCACAATCTCCTaGTTGACCTCAATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LHDHSLDLGYYTMVAGRDITTIS*LTSMPS
Trigger: GGACGGCATTGAGGTCAATCAGGAGATTGTGGTTAT...ATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR TCA 90 bp AGTTTCTCCTCCAGCTTCAAGTGGCCTTCACTACTCAGAAACCAATTCTACCTCATAACCACAATCTCCTaGTTGACCTCAATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SFSSSFKWPSLLRNQFYLITTIS*LTSMPS
Trigger: GGACGGCATTGAGGTCAATCAGGAGATTGTGGTTAT...GAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTGAAGCTGGAGGAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR TCA 90 bp TACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTAATCATCAGCTTCTTCTaGCTTGCCTTTGGACCTAAA +
Preference number: 4 (lower is better)
Translates to: YQAHQAYNPDTSMDKTQLIISFF*LAFGPK
Trigger: TTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGAT...TAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CAAAATCTCACGGGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTTTTGCTCTGCTAGCATaGGATCAACAAGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: QNLTGAEELVPVVLHLASFALLA*DQQENP
Trigger: TGGGTTTTCTTGTTGATCTCATGCTAGCAGAGCAAA...ACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCCCGTGAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR GCA 90 bp ACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TTRPIRPITQTPAWTKLSRIQSF*SRRWSS
Trigger: TGAGGACCATCTACGAGAGCAAAATGATTGAATACG...ACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATGCATCAAGCACATCATaGATTGTCACCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDASSTS*IVTMWS
Trigger: GGACCACATGGTGACAATGCATGATGTGCTTGATGC...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAGCAGATGGCATTTACTaGACTGTCTTTCATAACCAG +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAADGIY*TVFHNQ
Trigger: CTGGTTATGAAAGACAGTGCAGTAAATGCCATCTGC...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGAATAGCCATGCAGATTaGTTCTCCTTTGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: NKMENYQAHQAYNPDTSMNSHAD*FSFGGD
Trigger: ATCACCACCAAAGGAGAAGCAATCTGCATGGCTATT...CATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTATTGTCCAGAAGGCCCTaGTTGATCATCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLLSRRP*LIISFF
Trigger: GAAGAAGCTGATGATCAAGCAGGGCCTTCTGGACAA...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp GAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAATCTTCTTTCAGATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ECRCQPHNSPKRFLIFFQISGGR*NKAPVR
Trigger: TCTGACAGGTGCCTTATTCCAGCGACCCCCACTTAT...CTGAAAGAAGATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGCATTGTCACCATGTaGTCCTTTTCACTCATGACT +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPACIVTM*SFSLMT
Trigger: AGTCATGAGTGAAAAGGACCACATGGTGACAATGCA...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp GTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGATATCGAAGAACACCTaGAAGCATAATCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSLSMITLLILATIPWSQISKNT*KHNLGP
Trigger: GGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATAT...CTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAATCTCCAGACCAGCTTTaGCCTTCTTGTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQSPDQL*PSCPSY
Trigger: GTAAGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGA...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAATCTTCTTCTTCTTGGTaGTATCACTGTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQSSSSW*YHCPHL
Trigger: GAGATGGGGACAGTGATACCACCAAGAAGAAGAAGA...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTATCCTCCAGCTTCAAGTaGCCTTCACTACTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLSSSFK*PSLLRN
Trigger: GTTTCTGAGTAGTGAAGGCCACTTGAAGCTGGAGGA...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTCCTCCAGCTTCAAGTaGCCTTCACTACTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDSSSFK*PSLLRN
Trigger: GTTTCTGAGTAGTGAAGGCCACTTGAAGCTGGAGGA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp TCAGCTTCTTCTGACTTGCCTTTGGACCTAAACCCCACTTCCGAGGGTAAGTGTTGGCCCCATAGCAGATaGCATTTACCTAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SASSDLPLDLNPTSEGKCWPHSR*HLPNLL
Trigger: AAGAAGATTAGGTAAATGCCATCTGCTATGGGGCCA...ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGGTCAAATTCACTGAATaGCTTTCCAGGGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRVKFTE*LSRAVL
Trigger: CAGTACTGCCCTGGAAAGCCATTCAGTGAATTTGAC...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
3UTR CAA 72 bp AGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTTaGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SQMDLGEHCTQA*RKCKGLTSRPE
Trigger: TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTCACCTAAATCCATCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGATCTTCTTCTGGCAATaGCTTCCGCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQIFFWQ*LPLLFL
Trigger: AAGAAAAAGGAGCGGAAGTCATTGCCAGAAGAAGAT...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTATCTCTTCAGAGGATTTaGACCACATGCAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HIMSECRCQPHNSPKRFLSLQRI*TTCKRC
Trigger: ACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGA...TAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTATTATCATACAGCCACTaGGCATCAAGCACATCATGC +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLLSYSH*ASSTSC
Trigger: GCATGATGTGCTTGATGCTCAGTGGCTGTATGATAA...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTTATCATACAGCCACTaGGCATCAAGCACATCATGC +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDLSYSH*ASSTSC
Trigger: GCATGATGTGCTTGATGCTCAGTGGCTGTATGATAA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTCTTCTTTTCCTTCTTaGTCAACTGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDSSFPS*STEELL
Trigger: CAGCAGCTCCTCAGTTGATCAAGAAGGAAAAGAAGA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAATCAGATGGATTTAGGTaGGCACTGTACACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQSDGFR*ALYTSF
Trigger: AAAGCTTGTGTACAGTGCTCACCTAAATCCATCTGA...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTTTTGCTCTGCTAGCATaGGATCAACAAGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAFALLA*DQQENP
Trigger: TGGGTTTTCTTGTTGATCTCATGCTAGCAGAGCAAA...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTAGAGTGGCTCGTTCTATaGACACGATTAAACAACCAG +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLEWLVL*TRLNNQ
Trigger: CTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTC...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAACGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NEPSEAPASDHQLPITNQRIQSF*SRRWSS
Trigger: TGAGGACCATCTACGAGAGCAAAATGATTGAATACG...TTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCACGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPARIQSF*SRRWSS
Trigger: TGAGGACCATCTACGAGAGCAAAATGATTGAATACG...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAAAATAGCCATGCAGATTaGTTCTCCTTTGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQNSHAD*FSFGGD
Trigger: ATCACCACCAAAGGAGAAGCAATCTGCATGGCTATT...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp GAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGATTCTTCTTCTTCTTGGTaGTATCACTGTCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: ELFTLSRTYVPLSQQQKDSSSSW*YHCPHL
Trigger: GAGATGGGGACAGTGATACCACCAAGAAGAAGAAGA...ATCCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CCA 90 bp AAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCTCTTCTTCTTCTTCTTaGTGGTATCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KMCQNSSPCLGPMFHSLSSSSSS*WYHCPH
Trigger: ATGGGGACAGTGATACCACCAAGAAGAAGAAGAAGA...GCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAATAACCAGCCGTTTATaGGATGTCAACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQITSRL*DVNSFS
Trigger: GGAAAAGCTGTTGACATCTCATAAACGGCTGGTTAT...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTATCAGATGGATTTAGGTaGGCACTGTACACAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLSDGFR*ALYTSF
Trigger: AAAGCTTGTGTACAGTGCTCACCTAAATCCATCTGA...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAAAATAACAAACCAAGGTaGACACATAATGTCCGAATG +
Preference number: 4 (lower is better)
Translates to: EHCTQALRKCKGLTSRPENNKPR*THNVRM
Trigger: CATTCGGACATTATGTGTGCACCTTGGTTTGTTATT...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp AACGAACCCTCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAAATAACAAACCAAGGTaGACACATAATGTCCGAATG +
Preference number: 4 (lower is better)
Translates to: NEPSEAPASDHQLPITNQNNKPR*THNVRM
Trigger: CATTCGGACATTATGTGTGCACCTTGGTTTGTTATT...TTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGAGGGTTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR GCA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAAATAACAAACCAAGGTaGACACATAATGTCCGAATG +
Preference number: 4 (lower is better)
Translates to: RTRWKTTRPIRPITQTPANNKPR*THNVRM
Trigger: CATTCGGACATTATGTGTGCACCTTGGTTTGTTATT...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTTAGCAGATGGCATTTACTaGACTGTCTTTCATAACCAG +
Preference number: 4 (lower is better)
Translates to: QTRTTMLRQPLADSCGQLADGIY*TVFHNQ
Trigger: CTGGTTATGAAAGACAGTGCAGTAAATGCCATCTGC...TAACTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CAGAACTCTTCACCCTGTCTAGGACCTATGTTCCACTCTCTCAGCAACAAAAGGCATTGGGATAAACTCTaGCTCTTTCATCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QNSSPCLGPMFHSLSNKRHWDKL*LFHLSP
Trigger: TGGTGAAAGATGAAAGAGGCAGAGTTTATCCCAATG...CCTTTTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp ATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAATCATCTTCTTCTGGCAATaGCTTCCGCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IMSECRCQPHNSPKRFLIIFFWQ*LPLLFL
Trigger: AAGAAAAAGGAGCGGAAGTCATTGCCAGAAGAAGAT...GATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR TCA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGAGAGACAAAATTCAGTaGCACTCTTCTACCACTTAT +
Preference number: 4 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQRDKIQ*HSSTTY
Trigger: ATAAGTGGTAGAAGAGTGTCACTGAATTTTGTCTCT...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR TCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAAAGAGACAAAATTCAGTaGCACTCTTCTACCACTTAT +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQRDKIQ*HSSTTY
Trigger: ATAAGTGGTAGAAGAGTGTCACTGAATTTTGTCTCT...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR GCA 90 bp CATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGGTAGAGATGACCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HDHSLDLGYYTMVAGRDDRIQSF*SRRWSS
Trigger: TGAGGACCATCTACGAGAGCAAAATGATTGAATACG...GTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CCA 90 bp ATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAATCTGCATTGTCACCATGTaGTCCTTTTCACTCATGACT +
Preference number: 4 (lower is better)
Translates to: IMSECRCQPHNSPKRFLICIVTM*SFSLMT
Trigger: AGTCATGAGTGAAAAGGACCACATGGTGACAATGCA...GATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CCA 90 bp CACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAACAAAAACAGAGAAGTCATTaGGATAAACTCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HCTQALRKCKGLTSRPEQKQRSH*DKLCLF
Trigger: AAAGAGGCAGAGTTTATCCCAATGACTTCTCTGTTT...TTGTTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS GCA 90 bp CGTCAGGCCGCGCTGCTAGGACCCACCCACCCGCGCACTGCCCTGTaGGTGCCTTGCCGCGGGGCGGGAGGAGGCGGGGCCATCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RQAALLGPTHPRTAL*VPCRGAGGGGAIPG
Trigger: CCCCGGGATGGCCCCGCCTCCTCCCGCCCCGCGGCAAGGCACGCACAGGGCAGTGCGCGGGTGGGTGGGTCCTAGCAGCGCGGCCTGACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS GCA 90 bp TTGGTCCCGTCAGGCCGCGCTGCTAGGACCCACCCACCCGCGCACTaGCCTGTGCGTGCCTTGCCGCGGGGCGGGAGGAGGCGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LVPSGRAARTHPPAH*PVRALPRGGRRRGH
Trigger: ATGGCCCCGCCTCCTCCCGCCCCGCGGCAAGGCACGCACAGGGCAGTGCGCGGGTGGGTGGGTCCTAGCAGCGCGGCCTGACGGGACCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS GCA 90 bp GGCAAAATAATTACTTCCGCATCCGCCATGTTACCCTGCACCGCGTaGGTGCCGCCCGGTCCACAGCCGAGGGAACGACCGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: GKIITSASAMLPCTA*VPPGPQPRERPQTP
Trigger: GGGAGTCTGCGGTCGTTCCCTCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAGTAATTATTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000475423.1
ENST00000620277.4
CDS-3UTR CAA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAATGCCCTGTGCGTGCCTaGCCGCGGGGCGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: EHCTQALRKCKGLTSRPECPVRA*PRGGRR
Trigger: CCTCCTCCCGCCCCGCGGCAAGGCACGCACAGGGCA...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CAA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCACAGACTCCCGCCGCCTaGGTCCCGTCAGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAQTPAA*VPSGRA
Trigger: AGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCTG...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS GCA 90 bp TGTTTCTTTGGCAAAATAATTACTTCCGCATCCGCCATGTTACCCTaGACCGCGTGCGTGCCGCCCGGTCCACAGCCGAGGGAACGACCG +
Preference number: 5 (lower is better)
Translates to: CFFGKIITSASAMLP*TACVPPGPQPRERP
Trigger: CGGTCGTTCCCTCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAGTAATTATTTTGCCAAAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000473552.1
ENST00000475423.1
ENST00000620277.4
CDS-3UTR CAA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCAGACTCCCGCCGCCTaGGTCCCGTCAGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTQTPAA*VPSGRA
Trigger: AGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCTG...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CAA 90 bp TCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGTGGGCTTCCCATGCTaGTCCAGAAGGCCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SHSLASASQFLLLRQLPAVGFPC*SRRPCL
Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCAC...CGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS TCA 90 bp CCTGCATCAAGGCAGCAAGTGTGCCGTCTCTACCCACCCCGGCTCTaGAACATCCTGCCCTCACCTGTAGTCAACATACTCCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PASRQQVCRLYPPRL*NILPSPVVNILLLP
Trigger: TGGAAGCAGGAGTATGTTGACTACAGGTGAGGGCAGGATGTTTCAGAGCCGGGGTGGGTAGAGACGGCACACTTGCTGCCTTGATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481062.1
ENST00000620277.4
CDS-3UTR CAA 90 bp ACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGGCTCTTCTGACTTGCCTTaGGACCTAAACCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: TLSLPLRSFCCFGNYLRGSSDLP*DLNPTS
Trigger: GGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGA...GCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp TCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGTCCGCTTCGCAGTTTTaGCTGCTTCGGCAACTACCT +
Preference number: 5 (lower is better)
Translates to: SLSRFRFAVFAASATTCGSASQF*LLRQLP
Trigger: AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGA...CCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CATCTCCAGGCTCGGCCCCGCTCTCCAGACCAGCTTTGGCCTTCTTGTCCTTCTCACTGTACACAAGCTTaGAGGAAGTGCAAAGGACTG +
Preference number: 5 (lower is better)
Translates to: HLQARPRSPDQLWPSCPSHCTQA*RKCKGL
Trigger: CAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTG...AGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGAGCGGGGCCGAGCCTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS GCA 90 bp CACACGATTAAACAACCAGTCACCTTGGGATCCAGCGTACCACTGTaGCCTGTCTTCTCCACCCGAAGTATCCGTCGAATCCAGGCTACC +
Preference number: 5 (lower is better)
Translates to: HTIKQPVTLGSSVPL*PVFSTRSIRRIQAT
Trigger: GGTAGCCTGGATTCGACGGATACTTCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS CCA 90 bp CTCACTCGGAGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGAGTTTCTAGGGCCCTAGAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LTRSCLFTAAISGGR*NKAPVRVSRALESW
Trigger: CCAGCTTTCTAGGGCCCTAGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000413910.5
ENST00000437719.5
ENST00000620277.4
CDS CCA 90 bp CTCACTCGGAGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGAGTTTCTAGGGCCTGCACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LTRSCLFTAAISGGR*NKAPVRVSRACTLL
Trigger: CAACAGAGTGCAGGCCCTAGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS GCA 90 bp GGCCTGCACTCTGTTGTGACTTCACCAAGCGAGTGGCTCGTTCTATaGACACGATTAAACAACCAGTCACCTTGGGATCCAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: GLHSVVTSPSEWLVL*TRLNNQSPWDPAYH
Trigger: GTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS CCA 90 bp AGCGAGTGGCTCGTTCTATGCACACGATTAAACAACCAGTCACCTTaGGATCCAGCGTACCACTGTGCCCTGTCTTCTCCACCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: SEWLVLCTRLNNQSP*DPAYHCALSSPPEV
Trigger: TACTTCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS-3UTR CAA 90 bp CACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTCCCATCTTCTGACTTGCCTTaGGACCTAAACCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: HCCPCTPASRWQVGSTFPSSDLP*DLNPTS
Trigger: GGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGA...TGGGAAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR CAA 90 bp TGGTCGCAGGTAGAGATGACCGCTGTGGTCATTAATGCAATAGCCATGCAGATTGTGGGCTTCCCATGCTaGTCCAGAAGGCCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: WSQVEMTAVVINAIAMQIVGFPC*SRRPCL
Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCAC...AATCTGCATGGCTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CAA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTGTGGGCTTCCCATGCTaGTCCAGAAGGCCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTVGFPC*SRRPCL
Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCAC...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGTCCGCTTCGCAGTTTTaGCTGCTTCGGCAACTACCT +
Preference number: 5 (lower is better)
Translates to: RHFHSHSLASASQFLLLRSASQF*LLRQLP
Trigger: AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGA...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTTTGGCAGACTCACTGTaGTCCATGTACTCCTGCGTC +
Preference number: 5 (lower is better)
Translates to: HSHSLASASQFLLLRQLPLADSL*SMYSCV
Trigger: GACGCAGGAGTACATGGACAACAGTGAGTCTGCCAA...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS GCA 90 bp TGCCTGCACTCTGTTGTGACTTCACCAAGCGAGTGGCTCGTTCTATaGACACGATTAAACAACCAGTCACCTTGGGATCCAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: CLHSVVTSPSEWLVL*TRLNNQSPWDPAYH
Trigger: GTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000620277.4
CDS-3UTR CAA 90 bp GGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTTTGCCCCAAACCATCCCCACATACTCTTaGCCTGCACTCTGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: GAEELVPVVLHLASLPQTIPTYS*PALCCD
Trigger: GTCACAACAGAGTGCAGGCAAAGAGTATGTGGGGAT...GGTTTGGGGCAAACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CAA 90 bp TCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTGCGGGCAGATTGCTTCTCCTTaGGTGGTGATAACCACAATC +
Preference number: 5 (lower is better)
Translates to: SLSRFRFAVFAASATTCGQIASP*VVITTI
Trigger: GATTGTGGTTATCACCACCAAAGGAGAAGCAATCTG...CCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGTGGGCTTCCCATGCTaGTCCAGAAGGCCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQVGFPC*SRRPCL
Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCAC...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS GCA 90 bp TACCTGCACTCTGTTGTGACTTCACCAAGCGAGTGGCTCGTTCTATaGACACGATTAAACAACCAGTCACCTTGGGATCCAGCGTACCAC +
Preference number: 5 (lower is better)
Translates to: YLHSVVTSPSEWLVL*TRLNNQSPWDPAYH
Trigger: GTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGTCACAACAGAGTGCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473552.1
CDS CCA 90 bp GTCTTCTCCACCCGAAGTATCCGTCGAATCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGCTTGTCAAGATTAATGAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: VFSTRSIRRIQATTS*EEGLEGLSRLMKPV
Trigger: GACAGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTGGATTCGACGGATACTTCGGGTGGAGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS-3UTR CAA 90 bp ACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATAAACAACCAGTCACCTaGGGATCCAGCGTACCACTG +
Preference number: 5 (lower is better)
Translates to: TRPIRPITQTPAWTKLSYKQPVT*GSSVPL
Trigger: CAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTT...ATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp ACAACCACTAGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAGATTGCTTCTCCTTaGGTGGTGATAACCACAATC +
Preference number: 5 (lower is better)
Translates to: TTTSRQLRTVTGSEGEASQIASP*VVITTI
Trigger: GATTGTGGTTATCACCACCAAAGGAGAAGCAATCTG...GGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCTAGTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp TCGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGTCTTCTGACTTGCCTTaGGACCTAAACCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SSLSLSLSRFRFAVFAASSSDLP*DLNPTS
Trigger: GGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGA...CGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp AACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGTCCGCTTCGCAGTTTTaGCTGCTTCGGCAACTACCT +
Preference number: 5 (lower is better)
Translates to: NKMENYQAHQAYNPDTSMSASQF*LLRQLP
Trigger: AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGA...CATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp AGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAAGAGGGGTTAGAGGGCTaGTCAAGATTAATGAAACCT +
Preference number: 5 (lower is better)
Translates to: SRQLRTVTGSEGEASQLKEGLEG*SRLMKP
Trigger: AGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTC...TTTGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp GAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAAGCTAAACAACCAGTCACCTaGGGATCCAGCGTACCACTG +
Preference number: 5 (lower is better)
Translates to: EGTGTSSQMDLGEHCTQAKQPVT*GSSVPL
Trigger: CAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTT...AGCTTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAAATCCCCACATACTCTTaGCCTGCACTCTGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: EHCTQALRKCKGLTSRPEIPTYS*PALCCD
Trigger: GTCACAACAGAGTGCAGGCAAAGAGTATGTGGGGAT...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp AGCAGACAGCTGCGGACAGTTACTGGGTCTGAAGGTGAGGCTTCCCAACTCAAAATCACTCTCTTGATCTaGGCTACTATACCATGGTCG +
Preference number: 5 (lower is better)
Translates to: SRQLRTVTGSEGEASQLKITLLI*ATIPWS
Trigger: CGACCATGGTATAGTAGCCAAGATCAAGAGAGTGAT...TTTGAGTTGGGAAGCCTCACCTTCAGACCCAGTAACTGTCCGCAGCTGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp GAGCACTGTACACAAGCTTTGAGGAAGTGCAAAGGACTGACCTCTAGGCCAGAATCTTCTGACTTGCCTTaGGACCTAAACCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: EHCTQALRKCKGLTSRPESSDLP*DLNPTS
Trigger: GGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGA...TTCTGGCCTAGAGGTCAGTCCTTTGCACTTCCTCAAAGCTTGTGTACAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp TCAGCTTCTTCTGACTTGCCTTTGGACCTAAACCCCACTTCCGAGGGTAAGTGTTCAGCTTCTTCTGACTaGCCTTTGGACCTAAACCCC +
Preference number: 5 (lower is better)
Translates to: SASSDLPLDLNPTSEGKCSASSD*PLDLNP
Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA...ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CAA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCTCAGCTTCTTCTGACTaGCCTTTGGACCTAAACCCC +
Preference number: 5 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLSASSD*PLDLNP
Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp GGTCTCAAAGTAGCAGCTAAAATGTGCCAGAACTCTTCACCCTGTCTAGGACCTTCCGCTTCGCAGTTTTaGCTGCTTCGGCAACTACCT +
Preference number: 5 (lower is better)
Translates to: GLKVAAKMCQNSSPCLGPSASQF*LLRQLP
Trigger: AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGA...AGGTCCTAGACAGGGTGAAGAGTTCTGGCACATTTTAGCTGCTACTTTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS TCA 90 bp GCCATGCAGATTGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTaGTTGACCTCAATGCCGTCCTCATATCGAAGAACACCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: AMQIASPLVVITTIS*LTSMPSSYRRTPGS
Trigger: GCTTCCAGGTGTTCTTCGATATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCAATCTGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000426673.5
ENST00000475966.1
ENST00000620277.4
CDS GCA 90 bp ATTCAGAGACAGCAGTTGGTAAGGCCAGCACCATTTAGTAAGCTATaGCTGAAGGACACTTGGACTGTCTGGGGCTGTGTCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: IQRQQLVRPAPFSKL*LKDTWTVWGCVISV
Trigger: CACTGAAATGACACAGCCCCAGACAGTCCAAGTGTCCTTCAGGCATAGCTTACTAAATGGTGCTGGCCTTACCAACTGCTGTCTCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS-3UTR CAA 90 bp TCCGAAGCTCCTGCATCTGACCACCAACTCCCAATAACAAACCAAGGTGCACACGAGGGGTTAGAGGGCTaGTCAAGATTAATGAAACCT +
Preference number: 5 (lower is better)
Translates to: SEAPASDHQLPITNQGAHEGLEG*SRLMKP
Trigger: AGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTC...GTGTGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CAA 90 bp CACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAAAACAACCAGTCACCTaGGGATCCAGCGTACCACTG +
Preference number: 5 (lower is better)
Translates to: HIMSECRCQPHNSPKRFLKQPVT*GSSVPL
Trigger: CAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTT...TAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CAA 90 bp GACTCACTGTTGTCCATGTACTCCTGCGTCCAGATGGCAAGTGGGCTCTACCTTTCCATGATCACTCTCTaGATCTTGGCTACTATACCA +
Preference number: 5 (lower is better)
Translates to: DSLLSMYSCVQMASGLYLSMITL*ILATIP
Trigger: TGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA...AAGGTAGAGCCCACTTGCCATCTGGACGCAGGAGTACATGGACAACAGTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426673.5
CDS-3UTR CAA 90 bp CACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGCAACTACCTTCCATGATCACTCTCTaGATCTTGGCTACTATACCA +
Preference number: 5 (lower is better)
Translates to: HSHSLASASQFLLLRQLPSMITL*ILATIP
Trigger: TGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA...AGGTAGTTGCCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CTTTTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTTCAGCTTCTTCTGACTaGCCTTTGGACCTAAACCCC +
Preference number: 5 (lower is better)
Translates to: LFLLDQLRSCWRSLVTFTSASSD*PLDLNP
Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA...AGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CGTCACTTTCACTCTCACTCTCTCGCTTCCGCTTCGCAGTTTTTGCTGCTTCGGAAATTCTTCAGCGTGTaGTATTTCGGCTACATCTTC +
Preference number: 5 (lower is better)
Translates to: RHFHSHSLASASQFLLLRKFFSV*YFGYIF
Trigger: GAAGATGTAGCCGAAATACAACACGCTGAAGAATTT...CCGAAGCAGCAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CAA 90 bp GGAGCTGAAGAGCTGGTTCCTGTGGTCCTGCATTTAGCAAGTTTGCCCCAAACCGAGGTGTATAGTGTGTaGTCCTTACATTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GAEELVPVVLHLASLPQTEVYSV*SLHSAY
Trigger: ATAAGCTGAATGTAAGGACAACACACTATACACCTC...GGTTTGGGGCAAACTTGCTAAATGCAGGACCACAGGAACCAGCTCTTCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS-3UTR CAA 90 bp TGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAAGAGGGGTTAGAGGGCTaGTCAAGATTAATGAAACCT +
Preference number: 5 (lower is better)
Translates to: WKTTRPIRPITQTPAWTKEGLEG*SRLMKP
Trigger: AGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTC...TTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp TTCCTTCTTGATCAACTGAGGAGCTGCTGGAGGAGTCTCGTCACTTTCACTCTCCAGATTGCTTCTCCTTaGGTGGTGATAACCACAATC +
Preference number: 5 (lower is better)
Translates to: FLLDQLRSCWRSLVTFTLQIASP*VVITTI
Trigger: GATTGTGGTTATCACCACCAAAGGAGAAGCAATCTG...GAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATCAAGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412124.5
ENST00000426673.5
ENST00000620277.4
CDS-3UTR CAA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAATCAGCTTCTTCTGACTaGCCTTTGGACCTAAACCCC +
Preference number: 5 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQSASSD*PLDLNP
Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGA...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS CCA 90 bp AATCTCCTGATTGACCTCAATGCCGTCCTCATATCGAAGAACACCTaGAAGCATAATCTTGGCCCCATAGCAGATGGCATTTACTGCACT +
Preference number: 5 (lower is better)
Translates to: NLLIDLNAVLISKNT*KHNLGPIADGIYCT
Trigger: AGTGCAGTAAATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATATGAGGACGGCATTGAGGTCAATCAGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000426673.5
ENST00000475966.1
ENST00000484317.5
ENST00000620277.4
CDS CCA 90 bp TTGGTAAGGCCAGCACCATTTAGTAAGCTATGCCTGAAGGACACTTaGACTGTCTGGGGCTGTGTCATTTCAGTGCTTTTTCGAATCTAC +
Preference number: 5 (lower is better)
Translates to: LVRPAPFSKLCLKDT*TVWGCVISVLFRIY
Trigger: GTAGATTCGAAAAAGCACTGAAATGACACAGCCCCAGACAGTCCAAGTGTCCTTCAGGCATAGCTTACTAAATGGTGCTGGCCTTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS-3UTR CAA 90 bp GCCACCATCAAAATACTGACGCTGGACAGAAGAACTCACCACTTACTGTTGCAGATCACTCTCTTGATCTaGGCTACTATACCATGGTCG +
Preference number: 5 (lower is better)
Translates to: ATIKILTLDRRTHHLLLQITLLI*ATIPWS
Trigger: CGACCATGGTATAGTAGCCAAGATCAAGAGAGTGAT...CTGCAACAGTAAGTGGTGAGTTCTTCTGTCCAGCGTCAGTATTTTGATGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS GCA 90 bp GAAAAGCAGCACCTAATCTTCTTTCAGGATCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCACTCGGAGCTGCCTCTTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: EKQHLIFFQDRIQSF*SRRWSSLGAASLLQ
Trigger: CTGCAGTAAAGAGGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGTGCTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437719.5
CDS CCA 90 bp AATCTCCTGATTGACCTCAATGCCGTCCTCATATCGAAGAACACCTaGAAGCATAATCTTGGCCCCATAGCAGATGGCATTTACCTAATC +
Preference number: 5 (lower is better)
Translates to: NLLIDLNAVLISKNT*KHNLGPIADGIYLI
Trigger: GATTAGGTAAATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATATGAGGACGGCATTGAGGTCAATCAGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS CCA 90 bp CCAGCACCATTTAGTAAGCTATGCCTGAAGGACACTTGGACTGTCTaGGGCTGTGTCATTTCAGTGCTTTTTCGAATCTACACAATGACT +
Preference number: 5 (lower is better)
Translates to: PAPFSKLCLKDTWTV*GCVISVLFRIYTMT
Trigger: AGTCATTGTGTAGATTCGAAAAAGCACTGAAATGACACAGCCCCAGACAGTCCAAGTGTCCTTCAGGCATAGCTTACTAAATGGTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS-3UTR CAA 90 bp AGAACAAGATGGAAAACTACCAGGCCCATCAGGCCTATAACCCAGACACCAGCAAAATTCTTCAGCGTGTaGTATTTCGGCTACATCTTC +
Preference number: 5 (lower is better)
Translates to: RTRWKTTRPIRPITQTPAKFFSV*YFGYIF
Trigger: GAAGATGTAGCCGAAATACAACACGCTGAAGAATTT...TGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTAGTTTTCCATCTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp CATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGGTAGAGATGACCAGATTGCTTCTCCTTaGGTGGTGATAACCACAATC +
Preference number: 5 (lower is better)
Translates to: HDHSLDLGYYTMVAGRDDQIASP*VVITTI
Trigger: GATTGTGGTTATCACCACCAAAGGAGAAGCAATCTG...GTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CAA 90 bp ATGCAAACTAGGACTACGATGTTAAGACAACCACTAGCAGACAGCTGCGGACAGTCCATGATCACTCTCTaGATCTTGGCTACTATACCA +
Preference number: 5 (lower is better)
Translates to: MQTRTTMLRQPLADSCGQSMITL*ILATIP
Trigger: TGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA...CTGTCCGCAGCTGTCTGCTAGTGGTTGTCTTAACATCGTAGTCCTAGTTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp GTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGGTCGCAGTCCATGATCACTCTCTaGATCTTGGCTACTATACCA +
Preference number: 5 (lower is better)
Translates to: VSLSMITLLILATIPWSQSMITL*ILATIP
Trigger: TGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGA...CTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS GCA 90 bp GATGGCATTTACCTAATCTTCTTTCAGGATCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCACTCGGAGCTGCCTCTTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: DGIYLIFFQDRIQSF*SRRWSSLGAASLLQ
Trigger: CTGCAGTAAAGAGGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGTAAATGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CAA 90 bp AGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTATACTGAGGTGTATAGTGTGTaGTCCTTACATTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: RPIRPITQTPAWTKLSYTEVYSV*SLHSAY
Trigger: ATAAGCTGAATGTAAGGACAACACACTATACACCTC...AGTATAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS-3UTR CAA 90 bp AGGGTAAGTGTCTCTCTCCATGATCACTCTCTTGATCTTGGCTACTATACCATGATCACTCTCTTGATCTaGGCTACTATACCATGGTCG +
Preference number: 5 (lower is better)
Translates to: RVSVSLHDHSLDLGYYTMITLLI*ATIPWS
Trigger: CGACCATGGTATAGTAGCCAAGATCAAGAGAGTGAT...CATGGTATAGTAGCCAAGATCAAGAGAGTGATCATGGAGAGAGACACTTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS-3UTR CAA 90 bp TACCAGGCCCATCAGGCCTATAACCCAGACACCAGCATGGACAAAACTCAGTTACCAATTCTACCTCTTTaGCTTTCTTCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YQAHQAYNPDTSMDKTQLPILPL*LSSSSS
Trigger: AGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGG...TAACTGAGTTTTGTCCATGCTGGTGTCTGGGTTATAGGCCTGATGGGCCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS TCA 90 bp GAAACCTGTCCTGATATAGTCCCCAATCTCTCTCTTCAGAGGATTTaGACCACATGCAAGAGGTGTATAGTGTGTTGTCCTTACATTCAG +
Preference number: 5 (lower is better)
Translates to: ETCPDIVPNLSLQRI*TTCKRCIVCCPYIQ
Trigger: CTGAATGTAAGGACAACACACTATACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAGATTGGGGACTATATCAGGACAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS-3UTR CAA 90 bp CACATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAGAGGTGTATAGTGTGTaGTCCTTACATTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: HIMSECRCQPHNSPKRFLEVYSV*SLHSAY
Trigger: ATAAGCTGAATGTAAGGACAACACACTATACACCTC...TAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CAA 90 bp ATAATGTCCGAATGTAGGTGCCAGCCTCACAACTCACCCAAAAGATTCCTAATCAAATTCTTCAGCGTGTaGTATTTCGGCTACATCTTC +
Preference number: 5 (lower is better)
Translates to: IMSECRCQPHNSPKRFLIKFFSV*YFGYIF
Trigger: GAAGATGTAGCCGAAATACAACACGCTGAAGAATTT...GATTAGGAATCTTTTGGGTGAGTTGTGAGGCTGGCACCTACATTCGGACATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS-3UTR CAA 90 bp CAAGAGGGCACAGGAACAAGTAGTCAGATGGATTTAGGTGAGCACTGTACACAACCAATTCTACCTCTTTaGCTTTCTTCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QEGTGTSSQMDLGEHCTQPILPL*LSSSSS
Trigger: AGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGG...TTGTGTACAGTGCTCACCTAAATCCATCTGACTACTTGTTCCTGTGCCCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369550.10
ENST00000620277.4
CDS GCA 90 bp CTGTGTCATTTCAGTGCTTTTTCGAATCTACACAATGACTACCAATaGTGGCCCATTCCTTGGAAACCTTTAAAAACACTTCTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LCHFSAFSNLHNDYQ*WPIPWKPLKTLLSF
Trigger: AAAGGAAAGAAGTGTTTTTAAAGGTTTCCAAGGAATGGGCCAGCATTGGTAGTCATTGTGTAGATTCGAAAAAGCACTGAAATGACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS GCA 72 bp GCGCTGCTAGGACCCACCCACCCGCGCACTGCCCTGTaGGTGCCTTGCCGCGGGGCGGGAGGAGGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: ALLGPTHPRTAL*VPCRGAGGGGA
Trigger: GGCCCCGCCTCCTCCCGCCCCGCGGCAAGGCACGCACAGGGCAGTGCGCGGGTGGGTGGGTCCTAGCAGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS CAA 90 bp CCGCCCGGTCCACAGCCGAGGGAACGACCGCAGACTCCCGCCGCCTaGGTCCCGTCAGGCCGCGCTGCTAGGACCCACCCACCCGCGCAC +
Preference number: 6 (lower is better)
Translates to: PPGPQPRERPQTPAA*VPSGRAARTHPPAH
Trigger: GTGCGCGGGTGGGTGGGTCCTAGCAGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCTGCGGTCGTTCCCTCGGCTGTGGACCGGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475423.1
ENST00000620277.4
CDS CCA 72 bp CGGGGCCATCCCGGGGGCGGAATCCGAGGCGCCCGCTaGTCGTCTGCGCAATGCGATTTGCTGGCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: RGHPGGGIRGAR*SSAQCDLLARP
Trigger: TGGCCGAGCCAGCAAATCGCATTGCGCAGACGACCAGCGGGCGCCTCGGATTCCGCCCCCGGGATGGCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620277.4
CDS CAA 72 bp CCACAGCCGAGGGAACGACCGCAGACTCCCGCCGCCTaGGTCCCGTCAGGCCGCGCTGCTAGGACCCACCCA +
Preference number: 6 (lower is better)
Translates to: PQPRERPQTPAA*VPSGRAARTHP
Trigger: TGGGTGGGTCCTAGCAGCGCGGCCTGACGGGACCAAGGCGGCGGGAGTCTGCGGTCGTTCCCTCGGCTGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475423.1
ENST00000620277.4
CDS GCA 72 bp CTTCCGCATCCGCCATGTTACCCTGCACCGCGTGCGTaGCGCCCGGTCCACAGCCGAGGGAACGACCGCAGA +
Preference number: 6 (lower is better)
Translates to: LPHPPCYPAPRA*RPVHSRGNDRR
Trigger: TCTGCGGTCGTTCCCTCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000475423.1
ENST00000620277.4
CDS GCA 72 bp ATTACTTCCGCATCCGCCATGTTACCCTGCACCGCGTaGGTGCCGCCCGGTCCACAGCCGAGGGAACGACCG +
Preference number: 6 (lower is better)
Translates to: ITSASAMLPCTA*VPPGPQPRERP
Trigger: CGGTCGTTCCCTCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAGTAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000473552.1
ENST00000475423.1
ENST00000620277.4
CDS GCA 72 bp GGCAAAATAATTACTTCCGCATCCGCCATGTTACCCTaGACCGCGTGCGTGCCGCCCGGTCCACAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: GKIITSASAMLP*TACVPPGPQPR
Trigger: CCTCGGCTGTGGACCGGGCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAGTAATTATTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000473552.1
ENST00000475423.1
ENST00000620277.4
CDS TCA 72 bp AGGCAGCAAGTGTGCCGTCTCTACCCACCCCGGCTCTaGAACATCCTGCCCTCACCTGTAGTCAACATACTC +
Preference number: 6 (lower is better)
Translates to: RQQVCRLYPPRL*NILPSPVVNIL
Trigger: GAGTATGTTGACTACAGGTGAGGGCAGGATGTTTCAGAGCCGGGGTGGGTAGAGACGGCACACTTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481062.1
ENST00000620277.4
CDS GCA 72 bp AAACAACCAGTCACCTTGGGATCCAGCGTACCACTGTaGCCTGTCTTCTCCACCCGAAGTATCCGTCGAATC +
Preference number: 6 (lower is better)
Translates to: KQPVTLGSSVPL*PVFSTRSIRRI
Trigger: GATTCGACGGATACTTCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS CCA 72 bp AGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGAGTTTCTAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SCLFTAAISGGR*NKAPVRVSRAC
Trigger: GCAGGCCCTAGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452771.5
CDS CAA 90 bp AAGCGAGTGGCTCGTTCTATGCACACGATTAAACAACCAGTCACCTaGGGATCCAGCGTACCACTGTGCCCTGTCTTCTCCACCCGAAGT +
Preference number: 6 (lower is better)
Translates to: KRVARSMHTIKQPVT*GSSVPLCPVFSTRS
Trigger: ACTTCGGGTGGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS GCA 72 bp CAGCAGTTGGTAAGGCCAGCACCATTTAGTAAGCTATaGCTGAAGGACACTTGGACTGTCTGGGGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: QQLVRPAPFSKL*LKDTWTVWGCV
Trigger: GACACAGCCCCAGACAGTCCAAGTGTCCTTCAGGCATAGCTTACTAAATGGTGCTGGCCTTACCAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS CCA 72 bp AGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAATAAGGCACCTGTCAGAGTTTCTAGGGCCCTA +
Preference number: 6 (lower is better)
Translates to: SCLFTAAISGGR*NKAPVRVSRAL
Trigger: TAGGGCCCTAGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000413910.5
ENST00000437719.5
ENST00000620277.4
CDS CAA 72 bp GCTCGTTCTATGCACACGATTAAACAACCAGTCACCTaGGGATCCAGCGTACCACTGTGCCCTGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ARSMHTIKQPVT*GSSVPLCPVFS
Trigger: GGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS CCA 72 bp ACCCGAAGTATCCGTCGAATCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGCTTGTCAAGATTAATG +
Preference number: 6 (lower is better)
Translates to: TRSIRRIQATTS*EEGLEGLSRLM
Trigger: CATTAATCTTGACAAGCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTGGATTCGACGGATACTTCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS CCA 72 bp CTCGTTCTATGCACACGATTAAACAACCAGTCACCTTaGGATCCAGCGTACCACTGTGCCCTGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LVLCTRLNNQSP*DPAYHCALSSP
Trigger: TGGAGAAGACAGGGCACAGTGGTACGCTGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS CCA 72 bp ATTGACCTCAATGCCGTCCTCATATCGAAGAACACCTaGAAGCATAATCTTGGCCCCATAGCAGATGGCATT +
Preference number: 6 (lower is better)
Translates to: IDLNAVLISKNT*KHNLGPIADGI
Trigger: AATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATATGAGGACGGCATTGAGGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000426673.5
ENST00000475966.1
ENST00000484317.5
ENST00000620277.4
CDS CCA 72 bp CCAGCACCATTTAGTAAGCTATGCCTGAAGGACACTTaGACTGTCTGGGGCTGTGTCATTTCAGTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: PAPFSKLCLKDT*TVWGCVISVLF
Trigger: AAAAAGCACTGAAATGACACAGCCCCAGACAGTCCAAGTGTCCTTCAGGCATAGCTTACTAAATGGTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS GCA 72 bp CACCTAATCTTCTTTCAGGATCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCACTCGGAGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: HLIFFQDRIQSF*SRRWSSLGAAS
Trigger: AGAGGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437719.5
CDS CCA 72 bp TTTCAGGATCGTATTCAATCATTTTGCTCTCGTAGATaGTCCTCACTCGGAGCTGCCTCTTTACTGCAGCAA +
Preference number: 6 (lower is better)
Translates to: FQDRIQSFCSRR*SSLGAASLLQQ
Trigger: TTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000620277.4
CDS TCA 72 bp CCTGATATAGTCCCCAATCTCTCTCTTCAGAGGATTTaGACCACATGCAAGAGGTGTATAGTGTGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PDIVPNLSLQRI*TTCKRCIVCCP
Trigger: AGGACAACACACTATACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAGATTGGGGACTATATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4
CDS TCA 72 bp ATTGCTTCTCCTTTGGTGGTGATAACCACAATCTCCTaGTTGACCTCAATGCCGTCCTCATATCGAAGAACA +
Preference number: 6 (lower is better)
Translates to: IASPLVVITTIS*LTSMPSSYRRT
Trigger: TGTTCTTCGATATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000412124.5
ENST00000426673.5
ENST00000475966.1
ENST00000484317.5
ENST00000620277.4
CDS GCA 72 bp TACCTAATCTTCTTTCAGGATCGTATTCAATCATTTTaGTCTCGTAGATGGTCCTCACTCGGAGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: YLIFFQDRIQSF*SRRWSSLGAAS
Trigger: AGAGGCAGCTCCGAGTGAGGACCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412124.5
CDS CAA 90 bp CCTTGTGGTTATCATACAGCCACTGAGCATCAAGCACATCATGCATaGTCACCATGTGGTCCCAAAAGATTCCTAATCTTCTTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: PCGYHTATEHQAHHA*SPCGPKRFLIFFQD
Trigger: ATCCTGAAAGAAGATTAGGAATCTTTTGGGACCACATGGTGACAATGCATGATGTGCTTGATGCTCAGTGGCTGTATGATAACCACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413910.5
CDS TCA 72 bp GCTGTGTCATTTCAGTGCTTTTTCGAATCTACACAATaGCTACCAATGCTGGCCCATTCCTTGGAAACCTTT +
Preference number: 6 (lower is better)
Translates to: AVSFQCFFESTQ*LPMLAHSLETF
Trigger: AAAGGTTTCCAAGGAATGGGCCAGCATTGGTAGTCATTGTGTAGATTCGAAAAAGCACTGAAATGACACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS CAA 72 bp TATCATACAGCCACTGAGCATCAAGCACATCATGCATaGTCACCATGTGGTCCCAAAAGATTCCTAATCTTC +
Preference number: 6 (lower is better)
Translates to: YHTATEHQAHHA*SPCGPKRFLIF
Trigger: GAAGATTAGGAATCTTTTGGGACCACATGGTGACAATGCATGATGTGCTTGATGCTCAGTGGCTGTATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413910.5
CDS CCA 72 bp AGTGCTTTTTCGAATCTACACAATGACTACCAATGCTaGCCCATTCCTTGGAAACCTTTAAAAACACTTCTT +
Preference number: 6 (lower is better)
Translates to: SAFSNLHNDYQC*PIPWKPLKTLL
Trigger: AAGAAGTGTTTTTAAAGGTTTCCAAGGAATGGGCCAGCATTGGTAGTCATTGTGTAGATTCGAAAAAGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475423.1
CDS CAA 72 bp GAGGATTTGAACCACATGCAAGAGGTGTATAGTGTGTaGTCCTTACATTCAGCTTATCAAAATTCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: EDLNHMQEVYSV*SLHSAYQNSLA
Trigger: TGCTAAAGAATTTTGATAAGCTGAATGTAAGGACAACACACTATACACCTCTTGCATGTGGTTCAAATCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369550.10
ENST00000413910.5
ENST00000437719.5
ENST00000452771.5
ENST00000473552.1
ENST00000620277.4