RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIS3L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144535

Ensembl transcript IDs: ENST00000273009.10, ENST00000325385.12, ENST00000390005.9, ENST00000409401.7, ENST00000417808.1, ENST00000429283.2, ENST00000433430.5, ENST00000434477.5, ENST00000441279.5, ENST00000445090.5, ENST00000464554.5, ENST00000470087.1, ENST00000498319.2

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGGGCTGGGACACAGAGGGGTTCTGACCTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCCCAGACCAGCGTGAGTTCCGGCTTC +
Preference number: 1 (lower is better)
Translates to: RGLGHRGVLTCCAGS*SMSSGSQTSVSSGF
Trigger: GAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCAGGTCAGAACCCCTCTGTGTCCCAGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR TCA 90 bp GCTGTGCTGGCTCCTGCTCCATGTCCTCAGGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCA +
Preference number: 1 (lower is better)
Translates to: AVLAPAPCPQAPRPA*VPASCPPSGSGGTA
Trigger: TGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR GCA 90 bp CAGCAGGGCCTGCTCGGGGAAGGCGCGGTGGATCTTGTGGGCCACTaGCATGTTGGCCAAGAGCATGAACTCCTCCACGAGCTTGTTGCT +
Preference number: 1 (lower is better)
Translates to: QQGLLGEGAVDLVGH*HVGQEHELLHELVA
Trigger: AGCAACAAGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCT +
Preference number: 1 (lower is better)
Translates to: APSTKRCWRNCLAIP*RFKTAWCTSSLLCS
Trigger: AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CCA 90 bp TTATTGAGGGCTCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTaGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGGGGC +
Preference number: 1 (lower is better)
Translates to: LLRAPAELKSTGSPI*SQNSTRSLSILVWG
Trigger: GCCCCAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR TCA 90 bp TCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCACACAGCAGCCTGGGAAGCATGGGGA +
Preference number: 1 (lower is better)
Translates to: SVSRSQRRSACRTWG*GCTAPHTAAWEAWG
Trigger: TCCCCATGCTTCCCAGGCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR GCA 90 bp AAGGCGGGTGGACTGCTTGATGTCAGGAGTTTGGCATCCTGGCCTTaGCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGT +
Preference number: 1 (lower is better)
Translates to: KAGGLLDVRSLASWP*PLESVSRSQRRSAC
Trigger: ACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 90 bp GAAGTCAAGGCGGGTGGACTGCTTGATGTCAGGAGTTTGGCATCCTaGCCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCA +
Preference number: 1 (lower is better)
Translates to: EVKAGGLLDVRSLAS*PCPLESVSRSQRRS
Trigger: TGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCTTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 90 bp GTGCTGTGGGCAAAAGCAACTGTAGAGTCAATTCCAGGTACCACCTaGCAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGT +
Preference number: 1 (lower is better)
Translates to: VLWAKATVESIPGTT*QSQWGVPCAGLQKS
Trigger: ACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTACCTGGAATTGACTCTACAGTTGCTTTTGCCCACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 90 bp TCAGCCAGGCTTGTCCTCTTCGCACATCCACATTTCCTGAAGAGCTaGTCCAGCCTCCTCTGGAATGACAGGGCCATGACCTCTTCATTC +
Preference number: 1 (lower is better)
Translates to: SARLVLFAHPHFLKS*SSLLWNDRAMTSSF
Trigger: GAATGAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAGGACAAGCCTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 90 bp CGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATaGCAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: RTSTFPEELLQPPLE*QGHDLFILVVSRVS
Trigger: GGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 90 bp CTGCGGTCTTTTTCCCTAGTGAATGCTCCAGCACAGGGCAACCACTaGACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAG +
Preference number: 1 (lower is better)
Translates to: LRSFSLVNAPAQGNH*TLIGHLLSHKPWVK
Trigger: CTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGCCCTGTGCTGGAGCATTCACTAGGGAAAAAGACCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 90 bp CTCTTCGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTaGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGG +
Preference number: 1 (lower is better)
Translates to: LFAHPHFLKSCSSLL*NDRAMTSSFLWSQG
Trigger: CCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 90 bp AGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGATACAGTCTTTTCTGAAAGCACTGAA +
Preference number: 1 (lower is better)
Translates to: SEWLAGEGIIEVSGG*WVNGEDTVFSESTE
Trigger: TTCAGTGCTTTCAGAAAAGACTGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 90 bp CTCTTTCGCAGGGATTTTCTCAGTTGGGCTTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTTGGTGCAGGAGCGGATGATGGTCCG +
Preference number: 1 (lower is better)
Translates to: LFRRDFLSWAFNHAL*MLVAKFGAGADDGP
Trigger: CGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR GCA 90 bp AAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTaGCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTTCTATTCCAC +
Preference number: 1 (lower is better)
Translates to: KPSHSSCASTLGCTV*LQHAQGTSVSVLFH
Trigger: GTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 90 bp CTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATaGTCAGGGAACGTCAGTTTCAGTTCTATTCCACTGTTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: LLLCVYIGLYSLPSA*SGNVSFSSIPLFSF
Trigger: GAAAGAGAACAGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 90 bp CTACATTTCATTCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTaGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTTT +
Preference number: 1 (lower is better)
Translates to: LHFIPNPVTPPVRLH*AVQSAFSMLRERQF
Trigger: AAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGAATGAAATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 90 bp TACTCTGTTAGTATTCCTTCTGTTTCAGGCTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAAAGGCCT +
Preference number: 1 (lower is better)
Translates to: YSVSIPSVSGSISPA*PRLLASCPHSKKRP
Trigger: AGGCCTTTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR TCA 90 bp TGCCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAAAGGCCTTaGCCCCTTATCCAAAGGCAGGAAGATGGATTCGTATTTATATGT +
Preference number: 1 (lower is better)
Translates to: CPRLLASCPHSKKRP*PLIQRQEDGFVFIC
Trigger: ACATATAAATACGAATCCATCTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR GCA 90 bp CTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGGTGATTTAGCTTaGTTCCTTTTCTACATTTCATTCCAAACCCAGTCACTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: LFILVVSRVSPGDLA*FLFYISFQTQSLLL
Trigger: CAGGAGGAGTGACTGGGTTTGGAATGAAATGTAGAAAAGGAAGCAAGCTAAATCACCAGGGGAAACCCTTGAGACCACAAGAATGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 90 bp GTAAGCACACTGCATTCCCATATGAAACACACTGATGGATGCTTCTaGAACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCC +
Preference number: 1 (lower is better)
Translates to: VSTLHSHMKHTDGCF*NIKPHAIMPLYTLP
Trigger: GGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAGAAGCATCCATCAGTGTGTTTCATATGGGAATGCAGTGTGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR TCA 90 bp AACACAGAACTCCAATCAACATACCCACACTCAAAGAAAAGGCCTTaGCCCCTTATCCAAAGGCAGGAAGATGGATTCGTATTTATATGT +
Preference number: 1 (lower is better)
Translates to: NTELQSTYPHSKKRP*PLIQRQEDGFVFIC
Trigger: ACATATAAATACGAATCCATCTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTGATTGGAGTTCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGGCGGGGCAGGCGGCTaGTGGAGCTCAGCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRGGAGG*WSSAGA
Trigger: AGCACCAGCTGAGCTCCACCAGCCGCCTGCCCCGCC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
3UTR-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTGCCTAAGGGTGCAATaGGGGCAGCCGAGTCCCACC +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRCLRVQ*GQPSPT
Trigger: GGTGGGACTCGGCTGCCCTCATTGCACCCTTAGGCA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR GCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRREGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCTGCAGAGCCCAGCCGTaGGGGGACAAGGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSCRAQP*GDKDGR
Trigger: CCTGCCATCCTTGTCCCCTCACGGCTGGGCTCTGCA...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417808.1
ENST00000433430.5
3UTR-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
3UTR-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGTCCTAAAGCCAGTGTaGCGGGACAGGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSVLKPV*RDRQAG
Trigger: CCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGAC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
3UTR-3UTR CCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGGTCCTAAAGCCAGTGTaGCGGGACAGGCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLVLKPV*RDRQAG
Trigger: CCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGAC...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCTGGTGGAGCTCAGCTaGTGCTTGAGTCCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLVELS*CLSPRA
Trigger: AGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
3UTR-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCAGCCTCCTCTGGAATaGCAGGGCCATGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRQPPLE*QGHDLF
Trigger: GAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCAGGAGGACTGGGGCCTaGTCTGCTGGGGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCRRTGA*SAGVTA
Trigger: AGCAGTGACCCCAGCAGAGCAGGCCCCAGTCCTCCT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
3UTR-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAGGAGGACTGGGGCCTaGTCTGCTGGGGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSRRTGA*SAGVTA
Trigger: AGCAGTGACCCCAGCAGAGCAGGCCCCAGTCCTCCT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
3UTR-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCG +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCTFWKW*DRRASA
Trigger: CGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp TGCTCCATGTCCTCAGGCTCCCAGACCAGCGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTG +
Preference number: 2 (lower is better)
Translates to: CSMSSGSQTSVSSGF*PTFWKWWDRRASAL
Trigger: CAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACATGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp GCCTGCTCGGGGAAGGCGCGGTGGATCTTGTGGGCCACTGCCATGTaGGCCAAGAGCATGAACTCCTCCACGAGCTTGTTGCTCTCGCGG +
Preference number: 2 (lower is better)
Translates to: ACSGKARWILWATAM*AKSMNSSTSLLLSR
Trigger: CCGCGAGAGCAACAAGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR GCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGAAGTACAGTGCCATCTaGATGGGCCGGGAGCACATG +
Preference number: 2 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRKYSAI*MGREHM
Trigger: CATGTGCTCCCGGCCCATGCAGATGGCACTGTACTT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
3UTR-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGCTGTGGACTCTGCCTaGAGGACCACCTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQAVDSA*RTTSTR
Trigger: CCTGGTGGAGGTGGTCCTGCAGGCAGAGTCCACAGC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCGGCGGTCGTTACAGTaGTCCGCCTGTTTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRRRSLQ*SACFCR
Trigger: CCTGCAGAAACAGGCGGACCACTGTAACGACCGCCG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCTGTACAGGGGCACATTaGGCGCGTAGTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRACTGAH*ARSAGT
Trigger: AGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACA...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCTGCAGAGCCCAGCCGTaGGGGGACAAGGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFCRAQP*GDKDGR
Trigger: CCTGCCATCCTTGTCCCCTCACGGCTGGGCTCTGCA...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCGAGCAGAAGTACAGTaGCATCTGCATGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCRAEVQ*HLHGPG
Trigger: TCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCG...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
3UTR-3UTR GCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGGTGATGACCTGCTGTaGTGGCTCCTGCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCGDDLL*WLLLHV
Trigger: GACATGGAGCAGGAGCCAGCACAGCAGGTCATCACC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
3UTR-3UTR CCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTTGCCGTCAGCGAGTaGCTTGCAGGAGAGGGCATC +
Preference number: 2 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQVAVSE*LAGEGI
Trigger: GATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAAC...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGTGTACAGGGGCACATTaGGCGCGTAGTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQCTGAH*ARSAGT
Trigger: AGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACA...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGGGGGCCACTCTCCTTaGCCAGAACAGCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRGGHSP*PEQQRR
Trigger: TCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: VPASCPPSGSGGTAGPVREVSGG*WVNGED
Trigger: ATCTTCACCATTGACCCATCAACCGCCCGAGACCTC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGAAGTACAGTGCCATCTaGATGGGCCGGGAGCACATG +
Preference number: 2 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLKYSAI*MGREHM
Trigger: CATGTGCTCCCGGCCCATGCAGATGGCACTGTACTT...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR GCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFEGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGCAATCCCAGCACTTTaGGAAGTCAAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCAIPAL*EVKAGG
Trigger: TCCACCCGCCTTGACTTCCCAAAGTGCTGGGATTGC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGCAACCACTGCACCCTaGTCGGGCATTTGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQATTAP*SGICFH
Trigger: GTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGC...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 90 bp GTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTaGAGGCTGCACAGCTCCTCACACAGCAGCCTGGGAAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: VSVQITEKVSLSDMG*RLHSSSHSSLGSMG
Trigger: CCCCATGCTTCCCAGGCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp GCCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGGCTGCACAGCTCCTCACACAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALPSGVSVQITEKVS*SDMGLRLHSSSHSS
Trigger: GCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGAGCAGGGCCTGTTGTTaGTCTCGCGGTACTCATAGA +
Preference number: 2 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQSRACC*SRGTHR
Trigger: TCTATGAGTACCGCGAGAGCAACAACAGGCCCTGCT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR CCA 90 bp CGTAACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCG +
Preference number: 2 (lower is better)
Translates to: RNCLAIPWRFKTAWCTSSTFWKW*DRRASA
Trigger: CGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGT...CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 2 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGAGATTCAAGACGGCCTaGTGTACCTCCTCGCTGCTA +
Preference number: 2 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQRFKTA*CTSSLL
Trigger: TAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp TCCAAACGAAGTGCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTaGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: SKRSAPSTKRCWRNC*AIPWRFKTAWCTSS
Trigger: CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCGTTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGAATCGTGTTGGAACTaGCAGGAAAGTTCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCESCWN*QESSRC
Trigger: ACACCTGGAACTTTCCTGTCAGTTCCAACACGATTC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
3UTR-3UTR TCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAATCCCTTCTCTTGCTaGACTCCTCTGGTGGAATTG +
Preference number: 2 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRANPFSC*TPLVEL
Trigger: CAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVEVSGG*WVNGED
Trigger: ATCTTCACCATTGACCCATCAACCGCCCGAGACCTC...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTTGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSCRTWG*GCTAPH
Trigger: GTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACA...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGCCGTCCACAAAGCGCTaGTGGCGTAACTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLPSTKR*WRNCLA
Trigger: TGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGG...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCCTGATCCAAACGAAGTaGGCCGTCCACAAAGCGCTG +
Preference number: 2 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVLIQTK*AVHKAL
Trigger: CAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCAG...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 90 bp ATCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGGCTGCACAGCTCCTCACACAGCAGC +
Preference number: 2 (lower is better)
Translates to: ILPSGVSVQITEKVS*SDMGLRLHSSSHSS
Trigger: GCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR TCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGTGTGAACTCCCACTTTaGAGTTGCCGTCAGCGAGTG +
Preference number: 2 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGCELPL*SCRQRV
Trigger: CACTCGCTGACGGCAACTTCAAAGTGGGAGTTCACA...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGAT +
Preference number: 2 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQSRGPE*KQALAD
Trigger: ATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGA...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GTCCTCTTCGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: VLFAHPHFLKSCSSLLWNCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...ATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGGCTGAACTCCTCTGGTaGAATTGTCCATGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLAELLW*NCPWQA
Trigger: GGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGC...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTCCTGGCCTTGCCCTCTaGAGTCAGTGTCCAGATCAC +
Preference number: 2 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSPGLAL*SQCPDH
Trigger: GTGATCTGGACACTGACTCCAGAGGGCAAGGCCAGG...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCATGGCACTCCACACTTaGTTTTATTCTGTGACACTG +
Preference number: 2 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAMALHT*FYSVTL
Trigger: CAGTGTCACAGAATAAAATCAAGTGTGGAGTGCCAT...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390005.9
3UTR-3UTR TCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTTGGTGCAGGAGCGGATaGTGGTCCGGCCAAACCATT +
Preference number: 2 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLWCRSG*WSGQTI
Trigger: AATGGTTTGGCCGGACCATCATCCGCTCCTGCACCA...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTTGCCGTCAGCGAGTaGCTTGCAGGAGAGGGCATC +
Preference number: 2 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHVAVSE*LAGEGI
Trigger: GATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAAC...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTGGCAATCCGGTCTCGTaGTCCAGAGTGAAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAGNPVS*SRVKAS
Trigger: GCTTGCTTTCACTCTGGACCACGAGACCGGATTGCC...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACTGTACAGGGGCACATTaGGCGCGTAGTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHCTGAH*ARSAGT
Trigger: AGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACA...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp CACCTTTTGAACCAAGTAGACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGGCAGGGCCAGTGCGTTaGAGTAGATGCGCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: HLLNQVDACSPLGSHFIQAGPVR*SRCASA
Trigger: TGCAGAAGCGCATCTACTGCAACGCACTGGCCCTGC...CTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR GCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWSISPA*PRLLAS
Trigger: GCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR GCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGTTGGGCTTTCAATCATaGTCTGTGCATGCTCGTAGC +
Preference number: 2 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGLGFQS*SVHARS
Trigger: GCTACGAGCATGCACAGAGCATGATTGAAAGCCCAA...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTTGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGG +
Preference number: 2 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYACLAIP*RFKTAW
Trigger: CCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCA...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR TCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGAATCCCTTCTCTTGCTaGACTCCTCTGGTGGAATTG +
Preference number: 2 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLNPFSC*TPLVEL
Trigger: CAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp CGTAACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGTGGTGGAATTGTCCATaGCAGGCCTTGAGGAAGACA +
Preference number: 2 (lower is better)
Translates to: RNCLAIPWRFKTAWCTSSWWNCP*QALRKT
Trigger: TGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCA...CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CCA 90 bp CACTGCACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCGCTGAACTCCTCTGGTaGAATTGTCCATGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: HCTLIGHLLSHKPWVKNCAELLW*NCPWQA
Trigger: GGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGC...GCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCAAAGCACTGAACTACTaGGCACAACTCAACCAAGAG +
Preference number: 2 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVKALNY*AQLNQE
Trigger: CTCTTGGTTGAGTTGTGCCCAGTAGTTCAGTGCTTT...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTTTGATGTCAGGAGTTTaGCATCCTGGCCTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLLMSGV*HPGLAL
Trigger: GAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAA...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCCTCACGTCAGCAATGTaGACTCCCACTTTGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVLTSAM*TPTLKL
Trigger: CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAG...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTAGCATGTGTGTGCTGTaGGCAAAAGCAACTGTAGAG +
Preference number: 2 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYASMCVL*AKATVE
Trigger: CTCTACAGTTGCTTTTGCCCACAGCACACACATGCT...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR TCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGAT +
Preference number: 2 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLSRGPE*KQALAD
Trigger: ATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGA...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGAGGGATTTTCTCAGTTaGGCTTTCAATCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWRDFLS*AFNHAL
Trigger: CAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCT...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp TCTACATTTCATTCCAAACCCAGTCACTCCTCCTGTGCGTCTACATaGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTT +
Preference number: 2 (lower is better)
Translates to: STFHSKPSHSSCAST*GCTVCLQHAQGTSV
Trigger: AACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGAATGAAATGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR GCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTT +
Preference number: 2 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWFNHAL*MLVAKF
Trigger: AAACTTAGCTACGAGCATGCACAGAGCATGATTGAA...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 90 bp GTGAATGCTCCAGCACAGGGCAACCACTGCACCCTGATCGGGCATTaGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAAAATCTA +
Preference number: 2 (lower is better)
Translates to: VNAPAQGNHCTLIGH*LSHKPWVKNCFQNL
Trigger: TAGATTTTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGCCCTGTGCTGGAGCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR GCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGGCCCTTCACCATTTCTaGCACTATGAGCTATGTGCA +
Preference number: 2 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEALHHF*HYELCA
Trigger: TGCACATAGCTCATAGTGGCAGAAATGGTGAAGGGC...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR-3UTR TCA 90 bp CTGAAACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATGGCAGAAGAATCGCTTaGACCAGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LKHKASCHYATLYVALHHGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCTGGTTCAAGCGATTCTTCTGCC...ATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR-3UTR CCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGAAATCTAGTGAATTTTaGCCAAGCACGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLKSSEF*PSTVAH
Trigger: ATGAGCCACCGTGCTTGGCCAAAATTCACTAGATTT...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACCCAAAGGCAGGAAGATaGATTCGTATTTATATGTTT +
Preference number: 2 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHPKAGR*IRIYMF
Trigger: AAACATATAAATACGAATCCATCTTCCTGCCTTTGG...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR CCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACAGGGCAGAGATGGCTTaGTCTCTGACTCTTTTATTT +
Preference number: 2 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNRAEMA*SLTLLF
Trigger: AAATAAAAGAGTCAGAGACCAAGCCATCTCTGCCCT...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CCA 90 bp AACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTTCTCCAAAGGCAGGAAGATaGATTCGTATTTATATGTTT +
Preference number: 2 (lower is better)
Translates to: NIKPHAIMPLYTLPFTISPKAGR*IRIYMF
Trigger: AAACATATAAATACGAATCCATCTTCCTGCCTTTGG...AGAAATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR-3UTR GCA 90 bp AAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCACTGTCTACTCAAAGTGATAAATaGTGCATTACAAGTGTGGTT +
Preference number: 2 (lower is better)
Translates to: KNCTNLKRVYIHTASPLSTQSDK*CITSVV
Trigger: AACCACACTTGTAATGCAGCATTTATCACTTTGAGT...AGACAGTGGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGCGCAGCAGGGCCTGTaGTTGCTCTCGCGGTACTCA +
Preference number: 3 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRAQQGL*LLSRYS
Trigger: TGAGTACCGCGAGAGCAACAACAGGCCCTGCTGCGC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 3 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCACCGTCAGCGAGTGGCTaGCAGGAGAGGGCATCATCG +
Preference number: 3 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAPSASG*QERASS
Trigger: CGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CCA 72 bp CAGACCAGCGTGAGTTCCGGCTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAG +
Preference number: 3 (lower is better)
Translates to: QTSVSSGFLPTF*KWWDRRASALQ
Trigger: CTGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
3UTR CCA 72 bp AGCAGGGCCTGCTCGGGGAAGGCGCGGTGGATCTTGTaGGCCACTGCCATGTTGGCCAAGAGCATGAACTCC +
Preference number: 3 (lower is better)
Translates to: SRACSGKARWIL*ATAMLAKSMNS
Trigger: GGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGAGCTCAGCTGGTGCTaGAGTCCTCGGGCTCACCGT +
Preference number: 3 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQELSWC*SPRAHR
Trigger: ACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
3UTR GCA 72 bp CTGCTCGGGGAAGGCGCGGTGGATCTTGTGGGCCACTaGCATGTTGGCCAAGAGCATGAACTCCTCCACGAG +
Preference number: 3 (lower is better)
Translates to: LLGEGAVDLVGH*HVGQEHELLHE
Trigger: CTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp GCTCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTaGTCGCAGAATTCCACCAGGTCACTGAGCATCCTT +
Preference number: 3 (lower is better)
Translates to: APAELKSTGSPI*SQNSTRSLSIL
Trigger: AAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 3 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGACTCCTCTGGTGGAATaGTCCATGGCAGGCCTTGAG +
Preference number: 3 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQTPLVE*SMAGLE
Trigger: CTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQTEKVS*SDMGLR
Trigger: CCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR GCA 72 bp CGAAGTGCGCCGTCCACAAAGCGCTGCTGGCGTAACTaGTTGGCAATTCCGTGGAGATTCAAGACGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RSAPSTKRCWRN*LAIPWRFKTAW
Trigger: CCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCCGTCAGCGAGTGGCTaGCAGGAGAGGGCATCATCG +
Preference number: 3 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAPSASG*QERASS
Trigger: CGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCATGGGGACCACCTTTaGAACCAAGTAGACGCTTGT +
Preference number: 3 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCHGDHL*NQVDAC
Trigger: ACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATG...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GTCCTCTTCGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATGAGCTCAGCTGGTGCTaGAGTCCTCGGGCTCACCGT +
Preference number: 3 (lower is better)
Translates to: VLFAHPHFLKSCSSLLWNELSWC*SPRAHR
Trigger: ACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTC...ATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGACCCTGATCGGGCATTaGCTTTCACATAAGCCATGG +
Preference number: 3 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQTLIGH*LSHKPW
Trigger: CCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp AGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCACACAGCAGCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RSQRRSACRTWG*GCTAPHTAAWE
Trigger: TTCCCAGGCTGCTGTGTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR TCA 72 bp GGATCTTGTGGGCCACTGCCATGTTGGCCAAGAGCATaGACTCCTCCACGAGCTTGTTGCTCTCGCGGTACT +
Preference number: 3 (lower is better)
Translates to: GSCGPLPCWPRA*TPPRACCSRGT
Trigger: AGTACCGCGAGAGCAACAAGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp ACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: TKRCWRNCLAIP*RFKTAWCTSSL
Trigger: CAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CCA 72 bp AAGTCAAGGCGGGTGGACTGCTTGATGTCAGGAGTTTaGCATCCTGGCCTTGCCCTCTGGAGTCAGTGTCCA +
Preference number: 3 (lower is better)
Translates to: KSRRVDCLMSGV*HPGLALWSQCP
Trigger: TGGACACTGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCTTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGTGCTGGCGTAACTGCTaGGCAATTCCGTGGAGATTC +
Preference number: 3 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLCWRNC*AIPWRF
Trigger: GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCA...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGGCGGGTGGACTGCTaGATGTCAGGAGTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVRRVDC*MSGVWH
Trigger: ATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCT...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp GATCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGAACTCCTCTGGTGGAATaGTCCATGGCAGGCCTTGAG +
Preference number: 3 (lower is better)
Translates to: DLALWSQCPDHREGQLVGTPLVE*SMAGLE
Trigger: CTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGT...TCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR-3UTR CAA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCATAGATATGACATCCTaGAGGCAATCCGGTCTCGTG +
Preference number: 3 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVIDMTS*RQSGLV
Trigger: CACGAGACCGGATTGCCTCAAGGATGTCATATCTAT...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp GCAAAAGCAACTGTAGAGTCAATTCCAGGTACCACCTaGCAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: AKATVESIPGTT*QSQWGVPCAGL
Trigger: GAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTACCTGGAATTGACTCTACAGTTGCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp AACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTaGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATG +
Preference number: 3 (lower is better)
Translates to: NCLAIPWRFKTA*CTSSLLCSGEM
Trigger: CATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGCTTAAATCCCTTCTCTaGCTGAACTCCTCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLLKSLL*LNSSGG
Trigger: TCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAG...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR TCA 72 bp GACATCCTTGAGGCAATCCGGTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGATCCAAACGAAGTGCGC +
Preference number: 3 (lower is better)
Translates to: DILEAIRSRGPE*KQALADPNEVR
Trigger: GCGCACTTCGTTTGGATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR GCA 72 bp CACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTaGCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTT +
Preference number: 3 (lower is better)
Translates to: HSSCASTLGCTV*LQHAQGTSVSV
Trigger: AACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp ATTCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTaGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: IPNPVTPPVRLH*AVQSAFSMLRE
Trigger: TTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp CATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTaGAATGACAGGGCCATGACCTCTTCATTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: HPHFLKSCSSLL*NDRAMTSSFLW
Trigger: CCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp TGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTGAGCATGGGGACCACCTTTaGAACCAAGTAGACGCTTGT +
Preference number: 3 (lower is better)
Translates to: WSQCPDHREGQLVGHGVEHGDHL*NQVDAC
Trigger: ACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATG...CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR-3UTR CAA 90 bp GTCCTCTTCGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATCAGGGCAGAGATGGCTaGGTCTCTGACTCTTTTATT +
Preference number: 3 (lower is better)
Translates to: VLFAHPHFLKSCSSLLWNQGRDG*VSDSFI
Trigger: AATAAAAGAGTCAGAGACCAAGCCATCTCTGCCCTG...ATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp CTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGATACAGTCTTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: LAGEGIIEVSGG*WVNGEDTVFSE
Trigger: TTCAGAAAAGACTGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp ACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATaGCAGGGCCATGACCTCTTCATTCTTGTGGTCTCA +
Preference number: 3 (lower is better)
Translates to: TFPEELLQPPLE*QGHDLFILVVS
Trigger: TGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 72 bp TTTTCCCTAGTGAATGCTCCAGCACAGGGCAACCACTaGACCCTGATCGGGCATTTGCTTTCACATAAGCCA +
Preference number: 3 (lower is better)
Translates to: FSLVNAPAQGNH*TLIGHLLSHKP
Trigger: TGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGCCCTGTGCTGGAGCATTCACTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR-3UTR CAA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGCTTAAATCCCTTCTCTaGCTGAACTCCTCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLLKSLL*LNSSGG
Trigger: TCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAG...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp CTCTTAGCCAGCTGCCCACACTCAAAGAAAAGGCCTTaGCCCCTTATCCAAAGGCAGGAAGATGGATTCGTA +
Preference number: 3 (lower is better)
Translates to: LLASCPHSKKRP*PLIQRQEDGFV
Trigger: TACGAATCCATCTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGCAGCTGGCTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR GCA 72 bp AGTATTCCTTCTGTTTCAGGCTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGCTGCCCACACTCAAAG +
Preference number: 3 (lower is better)
Translates to: SIPSVSGSISPA*PRLLASCPHSK
Trigger: CTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGAGCCTGAAACAGAAGGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
3UTR GCA 72 bp TGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATaGTCAGGGAACGTCAGTTTCAGTTCTATTCCACTG +
Preference number: 3 (lower is better)
Translates to: CVYIGLYSLPSA*SGNVSFSSIPL
Trigger: CAGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR GCA 72 bp AGGGATTTTCTCAGTTGGGCTTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTTGGTGCAGGAGCGGAT +
Preference number: 3 (lower is better)
Translates to: RDFLSWAFNHAL*MLVAKFGAGAD
Trigger: ATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR GCA 72 bp GAACTACTGGGCACAACTCAACCAAGAGAGTTTGTATaGAGGGCAGAGATGGCTTGGTCTCTGACTCTTTTA +
Preference number: 3 (lower is better)
Translates to: ELLGTTQPREFV*RAEMAWSLTLL
Trigger: TAAAAGAGTCAGAGACCAAGCCATCTCTGCCCTGCATACAAACTCTCTTGGTTGAGTTGTGCCCAGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CCA 72 bp TATTCCACTGTTCTCTTTCACATTTCACAAGTGGTCTaGAGGTTCCCTCCAGCATCCAGCATTCAGGTCACA +
Preference number: 3 (lower is better)
Translates to: YSTVLFHISQVV*RFPPASSIQVT
Trigger: TGTGACCTGAATGCTGGATGCTGGAGGGAACCTCCAGACCACTTGTGAAATGTGAAAGAGAACAGTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp CTCCAATCAACATACCCACACTCAAAGAAAAGGCCTTaGCCCCTTATCCAAAGGCAGGAAGATGGATTCGTA +
Preference number: 3 (lower is better)
Translates to: LQSTYPHSKKRP*PLIQRQEDGFV
Trigger: TACGAATCCATCTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTGATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR GCA 72 bp CATTATGCCACTTTATACGTTGCCCTTCACCATTTCTaGCACTATGAGCTATGTGCACAGCTAGAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: HYATLYVALHHF*HYELCAQLEVS
Trigger: GCTGACTTCTAGCTGTGCACATAGCTCATAGTGGCAGAAATGGTGAAGGGCAACGTATAAAGTGGCATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR CCA 72 bp AAATCTGAGGGAAAAGATTGGGTATTGGAATGTACTTaGCTTTCCTGGCATCTGCTGCAAACCTCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: KSEGKDWVLECT*LSWHLLQTSAR
Trigger: CCTTGCAGAGGTTTGCAGCAGATGCCAGGAAAGCCAAGTACATTCCAATACCCAATCTTTTCCCTCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
3UTR TCA 72 bp CACTTTATACGTTGCCCTTCACCATTTCTGCCACTATaGGCTATGTGCACAGCTAGAAGTCAGCTGTGTTTA +
Preference number: 3 (lower is better)
Translates to: HFIRCPSPFLPL*AMCTARSQLCL
Trigger: TAAACACAGCTGACTTCTAGCTGTGCACATAGCTCATAGTGGCAGAAATGGTGAAGGGCAACGTATAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR TCA 72 bp ACCAGGCCAGAAAGTCTCTCTATCCGAAGCTCTCTCTaGACATCTCTTTCTTCTTTTATCTCTGGTAGTAGT +
Preference number: 3 (lower is better)
Translates to: TRPESLSIRSSL*TSLSSFISGSS
Trigger: ACTACTACCAGAGATAAAAGAAGAAAGAGATGTTCAGAGAGAGCTTCGGATAGAGAGACTTTCTGGCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR TCA 72 bp CTGCATTCCCATATGAAACACACTGATGGATGCTTCTaGAACATAAAGCCTCATGCCATTATGCCACTTTAT +
Preference number: 3 (lower is better)
Translates to: LHSHMKHTDGCF*NIKPHAIMPLY
Trigger: ATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAGAAGCATCCATCAGTGTGTTTCATATGGGAATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTGGCGGGGCAGGCGGCTaGTGGAGCTCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRGGAGG*WSSAGA
Trigger: AGCACCAGCTGAGCTCCACCAGCCGCCTGCCCCGCC...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGGCGGGGCAGGCGGCTaGTGGAGCTCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSGGAGG*WSSAGA
Trigger: AGCACCAGCTGAGCTCCACCAGCCGCCTGCCCCGCC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR CCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGGGCGGGGCAGGCGGCTaGTGGAGCTCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLGGAGG*WSSAGA
Trigger: AGCACCAGCTGAGCTCCACCAGCCGCCTGCCCCGCC...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGTCCTAAAGCCAGTGTaGCGGGACAGGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRVLKPV*RDRQAG
Trigger: CCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGAC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRTFWKW*DRRASA
Trigger: CGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTCGGGGAAGGCGCGGTaGATCTTGTGGGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRSGKAR*ILWATA
Trigger: GGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCCTAAAGCCAGTGTaGCGGGACAGGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCVLKPV*RDRQAG
Trigger: CCCCGCCTGCCTGTCCCGCCACACTGGCTTTAGGAC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAAGCTCAGCTGGTGCTTaGGTCCTCGGGCTCACCGTC +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVASSAGA*VLGLTV
Trigger: GACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCT...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAGCTCAGCTGGTGCTTaGGTCCTCGGGCTCACCGTC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSSSAGA*VLGLTV
Trigger: GACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCGAGCAGAAGTACAGTaGCATCTGCATGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRRAEVQ*HLHGPG
Trigger: TCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGCTGTGGACTCTGCCTaGAGGACCACCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCAVDSA*RTTSTR
Trigger: CCTGGTGGAGGTGGTCCTGCAGGCAGAGTCCACAGC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGCTGTGGACTCTGCCTaGAGGACCACCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSAVDSA*RTTSTR
Trigger: CCTGGTGGAGGTGGTCCTGCAGGCAGAGTCCACAGC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGCTGTGGACTCTGCCTaGAGGACCACCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRAVDSA*RTTSTR
Trigger: CCTGGTGGAGGTGGTCCTGCAGGCAGAGTCCACAGC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCEGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSEGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGGAGGACTGGGGCCTaGTCTGCTGGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRARRTGA*SAGVTA
Trigger: AGCAGTGACCCCAGCAGAGCAGGCCCCAGTCCTCCT...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRREVSGG*WVNGED
Trigger: ATCTTCACCATTGACCCATCAACCGCCCGAGACCTC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRCRTWG*GCTAPH
Trigger: GTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGGATGGCGCTGTACTTaGGGGCTGTGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSGWRCT*GLWTLP
Trigger: AGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGTGGAGCTCAGCTGGTaGTTGAGTCCTCGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSVELSW*LSPRAH
Trigger: GTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCAC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR GCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTAGAGGGGTTCTGACCTaGTGTGCTGGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRRGVLT*CAGSCS
Trigger: GGAGCAGGAGCCAGCACAGCAGGTCAGAACCCCTCT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGTTGCCGTCAGCGAGTaGCTTGCAGGAGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSVAVSE*LAGEGI
Trigger: GATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAAC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTACGGGCAGCCCCATCTaGTCGCAGAATTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRTGSPI*SQNSTR
Trigger: CCTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGT...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCACGGCGGTCGTTACAGTaGTCCGCCTGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVARRSLQ*SACFCR
Trigger: CCTGCAGAAACAGGCGGACCACTGTAACGACCGCCG...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCGGCGGTCGTTACAGTaGTCCGCCTGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRARRSLQ*SACFCR
Trigger: CCTGCAGAAACAGGCGGACCACTGTAACGACCGCCG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCTGGTGGAGCTCAGCTaGTGCTTGAGTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRLVELS*CLSPRA
Trigger: AGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCCTGGTGGAGCTCAGCTaGTGCTTGAGTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSLVELS*CLSPRA
Trigger: AGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAG...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTCAGAGTTCCCGCCTTaGGCAGCTCTGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRSEFPP*AALLSF
Trigger: GAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAAGGCACTCGGTGGTCTaGGGGAGAAAACAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVARHSVV*GRKQGV
Trigger: TACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCT...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTGTGAACTCCCACTTTaGAGTTGCCGTCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRCELPL*SCRQRV
Trigger: CACTCGCTGACGGCAACTTCAAAGTGGGAGTTCACA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTTGGTGCAGGAGCGGATaGTGGTCCGGCCAAACCATT +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRWCRSG*WSGQTI
Trigger: AATGGTTTGGCCGGACCATCATCCGCTCCTGCACCA...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCTGTACAGGGGCACATTaGGCGCGTAGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSCTGAH*ARSAGT
Trigger: AGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACA...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVARRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGGATGGCGCTGTACTTaGGGGCTGTGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQGWRCT*GLWTLP
Trigger: AGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCCGTCCACAAAGCGCTaGTGGCGTAACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRPSTKR*WRNCLA
Trigger: TGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGG...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCGCAGGGCCAGTGCGTTaGAGTAGATGCGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAAGPVR*SRCASA
Trigger: TGCAGAAGCGCATCTACTGCAACGCACTGGCCCTGC...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCGGTGATGACCTGCTGTaGTGGCTCCTGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAGDDLL*WLLLHV
Trigger: GACATGGAGCAGGAGCCAGCACAGCAGGTCATCACC...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTGGAGCTCAGCTGGTaGTTGAGTCCTCGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQVELSW*LSPRAH
Trigger: GTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCAC...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCCGTGCCACAAAGTCCTaGGGACAGTCCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSRATKS*GQSLRG
Trigger: GCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACG...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTGCTCCAGCCTCCTCTaGAATGACAGGGCCATGACC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCCSSLL*NDRAMT
Trigger: GGTCATGGCCCTGTCATTCCAGAGGAGGCTGGAGCA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCTCCTCGGGGATATCTaGTTCATACGCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLLGDI*FIRSFC
Trigger: ACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAEVSGG*WVNGED
Trigger: ATCTTCACCATTGACCCATCAACCGCCCGAGACCTC...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGCCCCAGGGCAAAATTaGAGTCCTCCTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRAPGQN*SPPSSP
Trigger: TGGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR GCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCGGTGTACCTCCTCGCTaGTATGCTCTGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAGVPPR*YALGKW
Trigger: CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACC...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCACGCTGCTGGCGTAACTaGTTGGCAATTCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVARCWRN*LAIPWR
Trigger: TCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCG...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCACTGATCCAAACGAAGTaGGCCGTCCACAAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVALIQTK*AVHKAL
Trigger: CAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCAG...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAAGTACAGTGCCATCTaGATGGGCCGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSKYSAI*MGREHM
Trigger: CATGTGCTCCCGGCCCATGCAGATGGCACTGTACTT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGCAGGGCCAGTGCGTTaGAGTAGATGCGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQAGPVR*SRCASA
Trigger: TGCAGAAGCGCATCTACTGCAACGCACTGGCCCTGC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCAAGATGGTGATGACCTaGTGTGCTGGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCKMVMT*CAGSCS
Trigger: GGAGCAGGAGCCAGCACAGCAGGTCATCACCATCTT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCGCAGCAGGGCTTGTTaGTCTCGCGGTACTCATAGA +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCRSRAC*SRGTHR
Trigger: TCTATGAGTACCGCGAGAGCAACAAGCCCTGCTGCG...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR CCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGACTGTTGCGGGAGATaGTGTCCACAGAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQDCCGR*CPQSSS
Trigger: CGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGATTCTAGGCACTCGGTaGTCTGAGGGAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRILGTR*SEGENR
Trigger: CCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAAT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAGCTGAACTCCTCTGGTaGAATTGTCCATGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAAELLW*NCPWQA
Trigger: GGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGC...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGCTGAACTCCTCTGGTaGAATTGTCCATGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCAELLW*NCPWQA
Trigger: GGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTATGCTCTGGGGAAATaGGGGGCAGCTCTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCYALGK*GAALSQ
Trigger: CTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCGGCAATCCGGTCTCGTaGTCCAGAGTGAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAGNPVS*SRVKAS
Trigger: GCTTGCTTTCACTCTGGACCACGAGACCGGATTGCC...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTCAGAGTTCCCGCCTTaGGCAGCTCTGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCSEFPP*AALLSF
Trigger: GAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCATCCGGGGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRHPGKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGCCATGTCCATCTTCTaGGTCGCTGCCATCAAACTG +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRAMSIF*VAAIKL
Trigger: CAGTTTGATGGCAGCGACTCAGAAGATGGACATGGC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTTATCAGCCAAGAGTTTaGGGAAGCCGGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRYQPRV*GSRLLL
Trigger: GAGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATA...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATGTGAACTCCCACTTTaGAGTTGCCGTCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVACELPL*SCRQRV
Trigger: CACTCGCTGACGGCAACTTCAAAGTGGGAGTTCACA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRSRGPE*KQALAD
Trigger: ATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGGGGGCCACTCTCCTTaGCCAGAACAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQGGHSP*PEQQRR
Trigger: TCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCC...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGAATCGTGTTGGAACTaGCAGGAAAGTTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRESCWN*QESSRC
Trigger: ACACCTGGAACTTTCCTGTCAGTTCCAACACGATTC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR TCA 90 bp CGTAACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGTGCAGAGCCCAGCCGTaGGGGGACAAGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: RNCLAIPWRFKTAWCTSSCRAQP*GDKDGR
Trigger: CCTGCCATCCTTGTCCCCTCACGGCTGGGCTCTGCA...CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATGTGGCAAGCAGGTCTaGATTTGGCTCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVACGKQV*IWLSGS
Trigger: GCTTCCTGAGAGCCAAATTCAGACCTGCTTGCCACA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCAGAGAAACCTCCACTaGTTAGCTCAGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRQRNLH*LAQSSR
Trigger: GCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR GCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGCTTTTCAGGGACTGTTaGGGGAGATGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLLFRDC*GRWCPQ
Trigger: CTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAG...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCAGACTCTTAGCCAGCTaGCCCAGGGCAAAATTGCAG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCRLLAS*PRAKLQ
Trigger: CTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAGACTCTTAGCCAGCTaGCCCAGGGCAAAATTGCAG +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSRLLAS*PRAKLQ
Trigger: CTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR GCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTTGGGCTTTCAATCATaGTCTGTGCATGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLGFQS*SVHARS
Trigger: GCTACGAGCATGCACAGAGCATGATTGAAAGCCCAA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCGCTGCTGGCGTAACTaGTTGGCAATTCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQRCWRN*LAIPWR
Trigger: TCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGCTGATCCAAACGAAGTaGGCCGTCCACAAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQLIQTK*AVHKAL
Trigger: CAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCAG...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGCTGTGGACTCTGCCTaGAGGACCACCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNAVDSA*RTTSTR
Trigger: CCTGGTGGAGGTGGTCCTGCAGGCAGAGTCCACAGC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGCAGCCTGGGAAGCATaGGGACCACCTTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQAAWEA*GPPFEP
Trigger: TGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGAGATTCAAGACGGCCTaGTGTACCTCCTCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLRFKTA*CTSSLL
Trigger: TAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCT...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCCLAIP*RFKTAW
Trigger: CCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCACGGGCAGCCCCATCTaGTCGCAGAATTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFTGSPI*SQNSTR
Trigger: CCTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGT...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 72 bp GGGAAGGCGCGGTGGATCTTGTGGGCCACTGCCATGTaGGCCAAGAGCATGAACTCCTCCACGAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GKARWILWATAM*AKSMNSSTSLL
Trigger: CAACAAGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGGATGGCGCTGTACTTaGGGGCTGTGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNGWRCT*GLWTLP
Trigger: AGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CCAGCTGCCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGTGCAGAGCCCAGCCGTaGGGGGACAAGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PAAHTQRKGLDPLSKGRKCRAQP*GDKDGR
Trigger: CCTGCCATCCTTGTCCCCTCACGGCTGGGCTCTGCA...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCAGAGAAACCTCCACTaGTTAGCTCAGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQQRNLH*LAQSSR
Trigger: GCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCTTTTCAGGGACTGTTaGGGGAGATGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQLFRDC*GRWCPQ
Trigger: CTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRSISPA*PRLLAS
Trigger: GCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGCCTCCACGAGCTTGTTaGTCTCGCGGTACTCATAGA +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQPPRAC*SRGTHR
Trigger: TCTATGAGTACCGCGAGAGCAACAAGCTCGTGGAGG...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGGCAGGGCCAGTGCGTTaGAGTAGATGCGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGAGPVR*SRCASA
Trigger: TGCAGAAGCGCATCTACTGCAACGCACTGGCCCTGC...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTAGGAGGACTGGGGCCTaGTCTGCTGGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSRRTGA*SAGVTA
Trigger: AGCAGTGACCCCAGCAGAGCAGGCCCCAGTCCTCCT...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCGCACAGGGCAACCACTaGACCCTGATCGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVAQGNH*TLIGHL
Trigger: CAAATGCCCGATCAGGGTGCAGTGGTTGCCCTGTGC...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCGAGCAGAAGTACAGTaGCATCTGGTAACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRARAEVQ*HLVTLC
Trigger: GCAGAGAGTTACCAGATGGCACTGTACTTCTGCTCG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCGACTGTTGCGGGAGATaGTGTCCACAGAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVDCCGR*CPQSSS
Trigger: CGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTC...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCATTCTAGGCACTCGGTaGTCTGAGGGAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCILGTR*SEGENR
Trigger: CCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAAT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATGGTGGAATTGTCCATaGCAGGCCTTGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAWWNCP*QALRKT
Trigger: TGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCTGGTGGAATTGTCCATaGCAGGCCTTGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCWWNCP*QALRKT
Trigger: TGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCA...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAAGGATCTTGCCCTCTaGAGTCAGTGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSKDLAL*SQCPDH
Trigger: GTGATCTGGACACTGACTCCAGAGGGCAAGATCCTT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR CCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGAGATTCAAGACGGCCTaGTGTACCTCCTCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQRFKTA*CTSSLL
Trigger: TAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCTCCACAAAGCGCTGCTaGCGTAACTGCTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSSTKRC*RNCLAI
Trigger: AATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGA...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGCTGGTGGAGCTCAGCTaGTGCTTGAGTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLLVELS*CLSPRA
Trigger: AGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAG...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTGTTCAGAATGCAGCTTTCCATGCCTAAGGGTGCAATGAGGGCAGCCGAGTCCCCTAGAGCCGCTGCATaGGCCGGGAGCACATGTTGG +
Preference number: 4 (lower is better)
Translates to: VFRMQLSMPKGAMRAAESPRAAA*AGSTCW
Trigger: CCAACATGTGCTCCCGGCCCATGCAGCGGCTCTAGG...GGACTCGGCTGCCCTCATTGCACCCTTAGGCATGGAAAGCTGCATTCTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGTGGACCTGTTCTTTaGCTTTTTGTCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRCGPVL*LFVTWR
Trigger: TCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATCAATACACCCTGGATaGGTGTTCCTCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVASIHPG*VFLSSS
Trigger: GCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCATCCGGGGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCHPGKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATG...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCATCCGGGGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRHPGKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCTCCTCGGGGATATCTaGTTCATACGCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQLLGDI*FIRSFC
Trigger: ACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTCGCTGCCATCAAACTaGGCCTCTACAATGACATCA +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRSLPSN*ASTMTS
Trigger: TGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCCAGCACATTTTGTGTaGTGCCATGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAPAHFV*CHVHLL
Trigger: CAGAAGATGGACATGGCATCACACAAAATGTGCTGG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCCCAGCACATTTTGTGTaGTGCCATGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSPAHFV*CHVHLL
Trigger: CAGAAGATGGACATGGCATCACACAAAATGTGCTGG...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGCCAGCACATTTTGTGTaGTGCCATGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLPAHFV*CHVHLL
Trigger: CAGAAGATGGACATGGCATCACACAAAATGTGCTGG...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCCACAATGCGGCAGATaGACAGTGTGTTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRPQCGR*TVCWHN
Trigger: ATTATGCCAACACACTGTTCATCTGCCGCATTGTGG...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCAATCCCTTCTCTTGCTaGACTCCTCTGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCNPFSC*TPLVEL
Trigger: CAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCTCACGTCAGCAATGTaGACTCCCACTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRALTSAM*TPTLKL
Trigger: CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGCTCACGTCAGCAATGTaGACTCCCACTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLLTSAM*TPTLKL
Trigger: CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAG...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRSRGPE*KQALAD
Trigger: ATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGTGTACAGGGGCACATTaGGCGCGTAGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLCTGAH*ARSAGT
Trigger: AGTTCCGGCACTACGCGCTCAATGTGCCCCTGTACA...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAGGGCACACTGTTGGTaGAAACGGTTCCAGACAATT +
Preference number: 4 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSRAHCW*KRFQTI
Trigger: AATTGTCTGGAACCGTTTTCACCAACAGTGTGCCCT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417808.1
CDS-3UTR GCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTATAATCTTTAGGCCGTaGCACAAAGTCCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRIIFRP*HKVLGT
Trigger: TGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTAT...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCATAATCTTTAGGCCGTaGCACAAAGTCCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCIIFRP*HKVLGT
Trigger: TGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTAT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR GCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQSISPA*PRLLAS
Trigger: GCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGTTGGGCTTTCAATCATaGTCTGTGCATGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLLGFQS*SVHARS
Trigger: GCTACGAGCATGCACAGAGCATGATTGAAAGCCCAA...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GGTGGACTGCTTGATGTCAGGAGTTTGGCATCCTGGCCTTGCCCTCTGGAGTCACCGTCCACAAAGCGCTaGTGGCGTAACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGLLDVRSLASWPCPLESPSTKR*WRNCLA
Trigger: TGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGG...TGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGATTCTCAATACACCCTaGATGAGTGTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRILNTP*MSVPLF
Trigger: GAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGGACTGTTGCGGGAGATaGTGTCCACAGAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLDCCGR*CPQSSS
Trigger: CGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTC...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTGTTCAGAATGCAGCTTTCCATGCCTAAGGGTGCAATGAGGGCAGCCGAGTCCGTTGCCGTCAGCGAGTaGCTTGCAGGAGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: VFRMQLSMPKGAMRAAESVAVSE*LAGEGI
Trigger: GATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAAC...GGACTCGGCTGCCCTCATTGCACCCTTAGGCATGGAAAGCTGCATTCTGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTGTTGCCGTCAGCGAGTaGCTTGCAGGAGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAVAVSE*LAGEGI
Trigger: GATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAAC...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGTCCACAAAGCGCTGCTaGCGTAACTGCTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQSTKRC*RNCLAI
Trigger: AATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGA...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp AGCAACTGTAGAGTCAATTCCAGGTACCACCTGACAGTCCCAGTGGGGAGTGCCAGCCAGAGGCAGTTCTaGGACTCAGGGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SNCRVNSRYHLTVPVGSASQRQF*DSGAAV
Trigger: CACAGCAGCCCCTGAGTCCCAGAACTGCCTCTGGCT...GGCACTCCCCACTGGGACTGTCAGGTGGTACCTGGAATTGACTCTACAGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 72 bp AGTGCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTaGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SAPSTKRCWRNC*AIPWRFKTAWC
Trigger: ACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
3UTR CAA 72 bp GAAGTCAAGGCGGGTGGACTGCTTGATGTCAGGAGTTaGGCATCCTGGCCTTGCCCTCTGGAGTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: EVKAGGLLDVRS*ASWPCPLESVS
Trigger: GGACACTGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCTTGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGTCGCTGCCATCAAACTaGGCCTCTACAATGACATCA +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQSLPSN*ASTMTS
Trigger: TGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGA...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTGTAAACCACCTTTGCTaGTCTTTGCAGGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRVNHLC*SLQGFL
Trigger: GAGAAATCCCTGCAAAGATCAGCAAAGGTGGTTTAC...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTAAACCACCTTTGCTaGTCTTTGCAGGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCVNHLC*SLQGFL
Trigger: GAGAAATCCCTGCAAAGATCAGCAAAGGTGGTTTAC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR TCA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGGCACTCGGTGGTCTaGGGGAGAAAACAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVRHSVV*GRKQGV
Trigger: TACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCT...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGAATCCCTTCTCTTGCTaGACTCCTCTGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQNPFSC*TPLVEL
Trigger: CAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCTGTTGGCCAAGAGCATaGACTCCTCCACGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFCWPRA*TPPRAC
Trigger: ACAAGCTCGTGGAGGAGTTCATGCTCTTGGCCAACA...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp CGTAACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RNCLAIPWRFKTAWCTSSRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CACTGCACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCAGCTCAGCTGGTGCTTaGGTCCTCGGGCTCACCGTC +
Preference number: 4 (lower is better)
Translates to: HCTLIGHLLSHKPWVKNCSSAGA*VLGLTV
Trigger: GACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCT...GCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCATTCCAGGTACCACCTaGCAGTCCCAGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVIPGTT*QSQWGV
Trigger: CACTCCCCACTGGGACTGTCAGGTGGTACCTGGAAT...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTGTACCTCCTTGGAGGTaGTGGCGTCAGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLVPPWR*WRQRQG
Trigger: TCCCTGCCTCTGACGCCATCACCTCCAAGGAGGTAC...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATTAACTACCTTCCAATaGTCCTCGGGAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVALTTFQ*SSGSSF
Trigger: GAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTTAA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTATCTTTTGTAACCGGTaGATCACCATCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRIFCNR*ITILSS
Trigger: GGAAGAGAGGATGGTGATGCACCGGTTACAAAAGAT...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR GCA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCATCTTTTGTAACCGGTaGATCACCATCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCIFCNR*ITILSS
Trigger: GGAAGAGAGGATGGTGATGCACCGGTTACAAAAGAT...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR GCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGAAGTACAGTGCCATCTaGATGGGCCGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWKYSAI*MGREHM
Trigger: CATGTGCTCCCGGCCCATGCAGATGGCACTGTACTT...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR GCA 90 bp CACTGCACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: HCTLIGHLLSHKPWVKNCEGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...GCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGAGGGCTGTGGACTCTaGCTGCAGGACCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHEGCGL*LQDHLH
Trigger: GTGGAGGTGGTCCTGCAGGCAGAGTCCACAGCCCTC...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTACCACCTGACAGTCCCAGTGGGGAGTGCCATGTGCAGGTCTCCAGAAGAGTCTTGGGCTGTACAGTCTaGCTTCAGCATGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPPDSPSGECHVQVSRRVLGCTV*LQHAQG
Trigger: TCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAA...GACTCTTCTGGAGACCTGCACATGGCACTCCCCACTGGGACTGTCAGGTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTAGGATGGCTCATTATTaGCTCCAAGGTCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRRMAHY*LQGHSS
Trigger: AGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CCA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGCTGAACTCCTCTGGTaGAATTGTCCATGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNAELLW*NCPWQA
Trigger: GGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGGCAATCCGGTCTCGTaGTCCAGAGTGAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNGNPVS*SRVKAS
Trigger: GCTTGCTTTCACTCTGGACCACGAGACCGGATTGCC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGAGCATGTGTGTGCTGTaGGCAAAAGCAACTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQSMCVL*AKATVE
Trigger: CTCTACAGTTGCTTTTGCCCACAGCACACACATGCT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTACTGAGCCTCTACAATaGCATCAGGACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRTEPLQ*HQDCHY
Trigger: ATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGTTGATGGGTCAATGGTaGAGATACAGTCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLMGQW*RYSLFL
Trigger: TAAGAAAAGACTGTATCTTCACCATTGACCCATCAA...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR TCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGTGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLCRTWG*GCTAPH
Trigger: GTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACA...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTGGGGGCCACTCTCCTTaGCCAGAACAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAGGHSP*PEQQRR
Trigger: TCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCC...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCGGATGGCGCTGTACTTaGGGGCTGTGGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVGWRCT*GLWTLP
Trigger: AGGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCC...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTATGGCACTCCACACTTaGTTTTATTCTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRMALHT*FYSVTL
Trigger: CAGTGTCACAGAATAAAATCAAGTGTGGAGTGCCAT...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS-3UTR TCA 90 bp AGCAACTGTAGAGTCAATTCCAGGTACCACCTGACAGTCCCAGTGGGGAGTGCCGCAACCACTGCACCCTaGTCGGGCATTTGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SNCRVNSRYHLTVPVGSAATTAP*SGICFH
Trigger: GTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGC...GGCACTCCCCACTGGGACTGTCAGGTGGTACCTGGAATTGACTCTACAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGTCTCCAGAAGAGTCTaGAGAGCCCCTTTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNVSRRV*RAPFRL
Trigger: GAGCCTAAAAGGGGCTCTTCAGACTCTTCTGGAGAC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAATGGCTTTTCAGGGACTGTTaGGGGAGATGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GDSRRPGVPPRCYALGKWLFRDC*GRWCPQ
Trigger: CTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAG...CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp AGCAACTGTAGAGTCAATTCCAGGTACCACCTGACAGTCCCAGTGGGGAGTGCCGGTGTACCTCCTCGCTaGTATGCTCTGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SNCRVNSRYHLTVPVGSAGVPPR*YALGKW
Trigger: CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACC...GGCACTCCCCACTGGGACTGTCAGGTGGTACCTGGAATTGACTCTACAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTGGTGTACCTCCTCGCTaGTATGCTCTGGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAGVPPR*YALGKW
Trigger: CCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACC...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTAGTCCCAGTGGGGAGTaGCATGTGCAGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLSPSGE*HVQVSR
Trigger: TCTGGAGACCTGCACATGGCACTCCCCACTGGGACT...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTGTTCAGAATGCAGCTTTCCATGCCTAAGGGTGCAATGAGGGCAGCCGAGTCCGCAGCCTGGGAAGCATaGGGACCACCTTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: VFRMQLSMPKGAMRAAESAAWEA*GPPFEP
Trigger: TGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGC...GGACTCGGCTGCCCTCATTGCACCCTTAGGCATGGAAAGCTGCATTCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTAGGGATTTTCTCAGTTaGGCTTTCAATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRRDFLS*AFNHAL
Trigger: CAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TCAATTTCACCAGCCTGCCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAAACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: SISPACPRLLASCPHSKKTFWKW*DRRASA
Trigger: CGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGT...TTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGCCATTTGGACACGTaGAGAAAATCTGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRASHLDT*RKSVGN
Trigger: ATTGCCTACAGATTTTCTCCACGTGTCCAAATGGCT...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCGCAATCCCAGCACTTTaGGAAGTCAAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVAIPAL*EVKAGG
Trigger: TCCACCCGCCTTGACTTCCCAAAGTGCTGGGATTGC...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGATTTCACAAGTGGTCTaGAGGTTCCCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGISQVV*RFPPAS
Trigger: GGATGCTGGAGGGAACCTCCAGACCACTTGTGAAAT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 72 bp TCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGGCTGCACAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGVSVQITEKVS*SDMGLRLHSSS
Trigger: TGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTGTTCAGAATGCAGCTTTCCATGCCTAAGGGTGCAATGAGGGCAGCCGAGTCCTATCAGCCAAGAGTTTaGGGAAGCCGGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VFRMQLSMPKGAMRAAESYQPRV*GSRLLL
Trigger: GAGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATA...GGACTCGGCTGCCCTCATTGCACCCTTAGGCATGGAAAGCTGCATTCTGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAATCCCTTCTCTTGCTaGACTCCTCTGGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGNPFSC*TPLVEL
Trigger: CAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TCAATTTCACCAGCCTGCCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAATGTCGGACATGGGGTTaGGGCTGCACAGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SISPACPRLLASCPHSKKCRTWG*GCTAPH
Trigger: GTGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACA...TTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCTGGTGCAGGAGCGGATaGTGGTCCGGCCAAACCATT +
Preference number: 4 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVWCRSG*WSGQTI
Trigger: AATGGTTTGGCCGGACCATCATCCGCTCCTGCACCA...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGTCTCGTGGTCCAGAGTaGAAGCAAGCTTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGSRGPE*KQALAD
Trigger: ATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGA...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGCAGCCTCCTCTGGAATaGCAGGGCCATGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLQPPLE*QGHDLF
Trigger: GAAGAGGTCATGGCCCTGTCATTCCAGAGGAGGCTG...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLSISPA*PRLLAS
Trigger: GCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRFNHAL*MLVAKF
Trigger: AAACTTAGCTACGAGCATGCACAGAGCATGATTGAA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACCCGTCCACAAAGCGCTaGTGGCGTAACTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHPSTKR*WRNCLA
Trigger: TGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGG...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGCATTTCCTGAAGAGCTaGTCCAGCCTCCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLHFLKS*SSLLWN
Trigger: ATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATG...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTTTGATGTCAGGAGTTTaGCATCCTGGCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYALMSGV*HPGLAL
Trigger: GAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAA...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 72 bp CATTCCAAACCCAGTCACTCCTCCTGTGCGTCTACATaGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSKPSHSSCAST*GCTVCLQHAQG
Trigger: TCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGTCGCTGCCATCAAACTaGGCCTCTACAATGACATCA +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLSLPSN*ASTMTS
Trigger: TGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGA...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGCCACAATGCGGCAGATaGACAGTGTGTTGGCATAAT +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLPQCGR*TVCWHN
Trigger: ATTATGCCAACACACTGTTCATCTGCCGCATTGTGG...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp CACCTTTTGAACCAAGTAGACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGGAGGTCTCGGGCGGTTaGTGGGTCAATGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HLLNQVDACSPLGSHFIQEVSGG*WVNGED
Trigger: ATCTTCACCATTGACCCATCAACCGCCCGAGACCTC...CTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGAAAATCTGTAGGCAATaGCCTTTGCTGATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQKICRQ*PLLIFA
Trigger: TGCAAAGATCAGCAAAGGTCATTGCCTACAGATTTT...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAATGCCTAAGGGTGCAATaGGGGCAGCCGAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQCLRVQ*GQPSPT
Trigger: GGTGGGACTCGGCTGCCCTCATTGCACCCTTAGGCA...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQFNHAL*MLVAKF
Trigger: AAACTTAGCTACGAGCATGCACAGAGCATGATTGAA...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCCTGATCCAAACGAAGTaGGCCGTCCACAAAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVLIQTK*AVHKAL
Trigger: CAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCAG...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTGAGGATCTTGTGGGCCACTaGCATGTTGGCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: WSQCPDHREGQLVGHGVEDLVGH*HVGQEH
Trigger: ATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATC...CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTTCTATTCCACTTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VQSAFSMLRERQFQFYSTCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...AGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CACCTTTTGAACCAAGTAGACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGGTGGGGAGTGCCATGTaGAGGTCTCCAGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HLLNQVDACSPLGSHFIQVGSAM*RSPEES
Trigger: AGACTCTTCTGGAGACCTGCACATGGCACTCCCCAC...CTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCAGGATGGCTCATTATTaGCTCCAAGGTCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFRMAHY*LQGHSS
Trigger: AGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCT...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTAAGGATCTTGCCCTCTaGAGTCAGTGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSKDLAL*SQCPDH
Trigger: GTGATCTGGACACTGACTCCAGAGGGCAAGATCCTT...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAAGCGCGGTGGATCTTGTaGGCCACTGCCATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQARWIL*ATAMLA
Trigger: GGCCAACATGGCAGTGGCCCACAAGATCCACCGCGC...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAACGGGCAGCCCCATCTaGTCGCAGAATTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQTGSPI*SQNSTR
Trigger: CCTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGT...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGAAAGCACTGAACTACTaGGCACAACTCAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGKALNY*AQLNQE
Trigger: CTCTTGGTTGAGTTGTGCCCAGTAGTTCAGTGCTTT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
3UTR CAA 72 bp CCAGCACAGGGCAACCACTGCACCCTGATCGGGCATTaGCTTTCACATAAGCCATGGGTCAAGAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PAQGNHCTLIGH*LSHKPWVKNCF
Trigger: AAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTGGTTGCCCTGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTGAGCTCCTCGGGGATATCTaGTTCATACGCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WSQCPDHREGQLVGHGVELLGDI*FIRSFC
Trigger: ACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAG...CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGTTGATGGGTCAATGGTaGAGATACAGTCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQLMGQW*RYSLFL
Trigger: TAAGAAAAGACTGTATCTTCACCATTGACCCATCAA...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR TCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGGGCAGAAGAATCGCTTaGACCAGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCTGGTTCAAGCGATTCTTCTGCC...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp GATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCGCAGCCAGGAGGCGGTaGACCAGGACGTCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DGFLTSRKAFIISFSTAFAARRR*TRTSAK
Trigger: CTTTGCCGACGTCCTGGTGCACCGCCTCCTGGCTGC...GAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGATCTTTTGTAACCGGTaGATCACCATCCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGIFCNR*ITILSS
Trigger: AGAAGAGAGGATGGTGATGCACCGGTTACAAAAGAT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp TGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTTTTTTCCCTAGTGAATaGTCCAGCACAGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: WQFRGDSRRPGVPPRCYAFFPSE*SSTGQP
Trigger: TGGTTGCCCTGTGCTGGAGCATTCACTAGGGAAAAA...AGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp GTCCTCTTCGCACATCCACATTTCCTGAAGAGCTGCTCCAGCCTCCTCTGGAATAGTCTGCCTTCAGCATaGTCAGGGAACGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VLFAHPHFLKSCSSLLWNSLPSA*SGNVSF
Trigger: GAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACT...ATTCCAGAGGAGGCTGGAGCAGCTCTTCAGGAAATGTGGATGTGCGAAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAGGTTCTGACCTGCTGTaGTGGCTCCTGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQGSDLL*WLLLHV
Trigger: GACATGGAGCAGGAGCCAGCACAGCAGGTCAGAACC...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CCA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCTGAAACATCCTCCTTaGACATGTAAGTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRLKHPP*TCKFQI
Trigger: TATTTGAAACTTACATGTCCAAGGAGGATGTTTCAG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGATTCTCAATACACCCTaGATGAGTGTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGILNTP*MSVPLF
Trigger: GAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GCGGTCTTTTTCCCTAGTGAATGCTCCAGCACAGGGCAACCACTGCACCCTGATACCTCTTCATTCTTGTaGTCTCAAGGGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVFFPSECSSTGQPLHPDTSSFL*SQGFPL
Trigger: CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGT...ATCAGGGTGCAGTGGTTGCCCTGTGCTGGAGCATTCACTAGGGAAAAAGACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGTCAGAGTTCCCGCCTTaGGCAGCTCTGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLESEFPP*AALLSF
Trigger: GAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGA...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp TCAATTTCACCAGCCTGCCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAAGCCATGTCCATCTTCTaGGTCGCTGCCATCAAACTG +
Preference number: 4 (lower is better)
Translates to: SISPACPRLLASCPHSKKAMSIF*VAAIKL
Trigger: CAGTTTGATGGCAGCGACTCAGAAGATGGACATGGC...TTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp GATCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACTCACGTCAGCAATGTaGACTCCCACTTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DLALWSQCPDHREGQLVGLTSAM*TPTLKL
Trigger: CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAG...TCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp CGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTGCTCCCAGACCAGCGTaGGTTCCGGCTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RWLSHLQEGIHHFFFYSFAPRPA*VPASCP
Trigger: TGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGC...AAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR TCA 90 bp GATCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGAAGGGCACACTGTTGGTaGAAACGGTTCCAGACAATT +
Preference number: 4 (lower is better)
Translates to: DLALWSQCPDHREGQLVGRAHCW*KRFQTI
Trigger: AATTGTCTGGAACCGTTTTCACCAACAGTGTGCCCT...TCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR GCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGCAGAGAAACCTCCACTaGTTAGCTCAGAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEQRNLH*LAQSSR
Trigger: GCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTG...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp TCCACGCCATACTCTGTTAGTATTCCTTCTGTTTCAGGCTCAATTTCACCAGCCCGAGCAGAAGTACAGTaGCATCTGCATGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: STPYSVSIPSVSGSISPARAEVQ*HLHGPG
Trigger: TCCCGGCCCATGCAGATGGCACTGTACTTCTGCTCG...GGCTGGTGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR GCA 90 bp TCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCGCTTGCAGACTGAGATaGTCTGGAGGGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRWLSHLQEGIHHFFFYSACRLR*SGGWPG
Trigger: GCCAGGCCACCCTCCAGAGCATCTCAGTCTGCAAGC...GCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGAGGGATTTTCTCAGTTaGGCTTTCAATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLRDFLS*AFNHAL
Trigger: CAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCT...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTTCTATTCCACTTATGCTCTGGGGAAATaGGGGGCAGCTCTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: VQSAFSMLRERQFQFYSTYALGK*GAALSQ
Trigger: CTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATA...AGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTTTCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: VSRWLSHLQEGIHHFFFYTFWKW*DRRASA
Trigger: CGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGT...GTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGCCAAAGGCAGGAAGATaGATTCGTATTTATATGTTT +
Preference number: 4 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQPKAGR*IRIYMF
Trigger: AAACATATAAATACGAATCCATCTTCCTGCCTTTGG...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGTCAATACACCCTGGATaGGTGTTCCTCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLSIHPG*VFLSSS
Trigger: GCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGA...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGGCCATGTCCATCTTCTaGGTCGCTGCCATCAAACTG +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKAMSIF*VAAIKL
Trigger: CAGTTTGATGGCAGCGACTCAGAAGATGGACATGGC...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACTGGTGCAGGAGCGGATaGTGGTCCGGCCAAACCATT +
Preference number: 4 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNWCRSG*WSGQTI
Trigger: AATGGTTTGGCCGGACCATCATCCGCTCCTGCACCA...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCGCCCAGGAACTTCTCTaGGCCTCAATTTCATTGTCT +
Preference number: 4 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVAQELL*ASISLS
Trigger: AGACAATGAAATTGAGGCTCAGAGAAGTTCCTGGGC...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCGCTGGGTCTCCGAGTTaGGGAATCTCTGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SRWLSHLQEGIHHFFFYSAGSPS*GISEVG
Trigger: CCCAACCTCAGAGATTCCTCAACTCGGAGACCCAGC...GCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGCTTTTCAGGGACTGTTaGGGGAGATGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKLFRDC*GRWCPQ
Trigger: CTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAG...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAAGCCCCAGGGCAAAATTaGAGTCCTCCTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQAPGQN*SPPSSP
Trigger: TGGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGC...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp ACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TMAFSPPGRHSSFLFLQLCCAGS*SMSSGS
Trigger: GGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCA...AAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTATTCTCAATACACCCTaGATGAGTGTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSILNTP*MSVPLF
Trigger: GAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGCGTGCCACAAAGTCCTaGGGACAGTCCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSMAGLEEDILELLKRNQRATKS*GQSLRG
Trigger: GCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACG...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAAGGCAATCCGGTCTCGTaGTCCAGAGTGAAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQGNPVS*SRVKAS
Trigger: GCTTGCTTTCACTCTGGACCACGAGACCGGATTGCC...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTTTCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACCGGCGGTCGTTACAGTaGTCCGCCTGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSRWLSHLQEGIHHFFFYRRSLQ*SACFCR
Trigger: CCTGCAGAAACAGGCGGACCACTGTAACGACCGCCG...GTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSMAGLEEDILELLKRNQFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTAGGGCAGAGATGGCTTaGTCTCTGACTCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSRAEMA*SLTLLF
Trigger: AAATAAAAGAGTCAGAGACCAAGCCATCTCTGCCCT...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTTCTATTCCACTCCTGTGCGTCTACATTaGGCTGTACAGTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VQSAFSMLRERQFQFYSTPVRLH*AVQSAF
Trigger: GAAGGCAGACTGTACAGCCCAATGTAGACGCACAGG...AGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp GATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCGGAGGGTGGCCTGGCTaGGTCTCCGAGTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DGFLTSRKAFIISFSTAFGGWPG*VSELRN
Trigger: ATTCCTCAACTCGGAGACCCAGCCAGGCCACCCTCC...GAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp TGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTTCTCTGGAGGGTGGCCTaGCTGGGTCTCCGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: WLSHLQEGIHHFFFYSFLLWRVA*LGLRVE
Trigger: CTCAACTCGGAGACCCAGCCAGGCCACCCTCCAGAG...AAGAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR TCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGCTCCTCGGGGATATCTaGTTCATACGCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKLLGDI*FIRSFC
Trigger: ACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAG...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp TCCACGCCATACTCTGTTAGTATTCCTTCTGTTTCAGGCTCAATTTCACCAGCCTGTGAACTCCCACTTTaGAGTTGCCGTCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: STPYSVSIPSVSGSISPACELPL*SCRQRV
Trigger: CACTCGCTGACGGCAACTTCAAAGTGGGAGTTCACA...GGCTGGTGAAATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR TCA 90 bp ACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTGTGACTGGAAGCTCTaGGCACACCAAGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TMAFSPPGRHSSFLFLQLCDWKL*AHQGAC
Trigger: GCAAGCCCCTTGGTGTGCTCAGAGCTTCCAGTCACA...AAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACCGCTGCTGGCGTAACTaGTTGGCAATTCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNRCWRN*LAIPWR
Trigger: TCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCG...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTTTCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACGCAGGGCCAGTGCGTTaGAGTAGATGCGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSRWLSHLQEGIHHFFFYAGPVR*SRCASA
Trigger: TGCAGAAGCGCATCTACTGCAACGCACTGGCCCTGC...GTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp CTGAAACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATGACTGTTGCGGGAGATaGTGTCCACAGAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LKHKASCHYATLYVALHHDCCGR*CPQSSS
Trigger: CGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTC...ATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACGCAGCCTGGGAAGCATaGGGACCACCTTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNAAWEA*GPPFEP
Trigger: TGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGC...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAATGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQCLAIP*RFKTAW
Trigger: CCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCA...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATCCACAAAGCGCTGCTaGCGTAACTGCTTGGCAATT +
Preference number: 4 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQSTKRC*RNCLAI
Trigger: AATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGA...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TCCAAACCCAGTCACTCCTCCTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTAAATCTAGTGAATTTTaGCCAAGCACGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SKPSHSSCASTLGCTVCLKSSEF*PSTVAH
Trigger: ATGAGCCACCGTGCTTGGCCAAAATTCACTAGATTT...AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGAGGAGTGACTGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGACTGAGCCTCTACAATaGCATCAGGACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLTEPLQ*HQDCHY
Trigger: ATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGT...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGTCGCTGCCATCAAACTaGGCCTCTACAATGACATCA +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKSLPSN*ASTMTS
Trigger: TGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGA...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp ATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTAGAAGAGACTGGTACTaGGCTCCTGCACGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: MAFSPPGRHSSFLFLQLSRRDWY*APARAW
Trigger: CCAAGCGCGTGCAGGAGCTCAGTACCAGTCTCTTCT...AGAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR TCA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAGGCAATGACCTTTGCTaGTCTTTGCAGGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQGNDLC*SLQGFL
Trigger: GAGAAATCCCTGCAAAGATCAGCAAAGGTCATTGCC...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR GCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGATCTTTTGTAACCGGTaGATCACCATCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEIFCNR*ITILSS
Trigger: GGAAGAGAGGATGGTGATGCACCGGTTACAAAAGAT...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp TGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTGAGTTCAATCATGCTCTGTaGATGCTCGTAGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: WSQCPDHREGQLVGHGVEFNHAL*MLVAKF
Trigger: AAACTTAGCTACGAGCATGCACAGAGCATGATTGAA...CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp GTCTCTGACTCTTTTATTTCCTGTCCAAGAAGATTTATAGCTAGGCTTGCTGGTTTGGCATCCTGGCCTTaGCCTCTGGAGTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VSDSFISCPRRFIARLAGLASWP*PLESVS
Trigger: GGACACTGACTCCAGAGGGCAAGGCCAGGATGCCAA...ACCAGCAAGCCTAGCTATAAATCTTCTTGGACAGGAAATAAAAGAGTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR GCA 90 bp CGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTTTGTCTCCTGCTGTaGTGGCTCCTGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: RWLSHLQEGIHHFFFYSFLCLLL*WLLLHV
Trigger: GACATGGAGCAGGAGCCAGCACAGCAGGAGACAAAG...AAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp GGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTTTGGGTTCTTTGTCTCCTaGTGTGCTGGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GFLTSRKAFIISFSTAFFGFFVS*CAGSCS
Trigger: GGAGCAGGAGCCAGCACAGCAGGAGACAAAGAACCC...AAAGAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp CACTGCACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCAGGGATTTTCTCAGTTaGGCTTTCAATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: HCTLIGHLLSHKPWVKNCRDFLS*AFNHAL
Trigger: CAGAGCATGATTGAAAGCCCAACTGAGAAAATCCCT...GCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACTGCTTGGCAATTCCGTaGAGATTCAAGACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNCLAIP*RFKTAW
Trigger: CCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCA...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CCA 90 bp TGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTTTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: WLSHLQEGIHHFFFYSFLFLPTF*KWWDRR
Trigger: CCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA...AAGAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CCA 90 bp GTCTCTGACTCTTTTATTTCCTGTCCAAGAAGATTTATAGCTAGGCTTGCTGGTCCTGGCCTTGCCCTCTaGAGTCAGTGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: VSDSFISCPRRFIARLAGPGLAL*SQCPDH
Trigger: GTGATCTGGACACTGACTCCAGAGGGCAAGGCCAGG...ACCAGCAAGCCTAGCTATAAATCTTCTTGGACAGGAAATAAAAGAGTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCACAAATCTTCCACTGTaGCAAGCAGGTCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVTNLPL*QAGLNL
Trigger: CAAATTCAGACCTGCTTGCCACAGTGGAAGATTTGT...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTCTTGGGGGCCACTCTCCTTaGCCAGAACAGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WLSHLQEGIHHFFFYSFLGGHSP*PEQQRR
Trigger: TCTTCTTTGCTGTTCTGGTCAAGGAGAGTGGCCCCC...AAGAAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGTTAACTACCTTCCAATaGTCCTCGGGAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKLTTFQ*SSGSSF
Trigger: GAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTTAA...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGCCAAGAGAGTTTGTATaGAGGGCAGAGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSMAGLEEDILELLKRNQPREFV*RAEMAW
Trigger: CCAAGCCATCTCTGCCCTGCATACAAACTCTCTTGG...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR TCA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGTCAATACACCCTGGATaGGTGTTCCTCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LSMAGLEEDILELLKRNQSIHPG*VFLSSS
Trigger: GCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGA...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAACTGAGCCTCTACAATaGCATCAGGACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQTEPLQ*HQDCHY
Trigger: ATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGT...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR TCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGAAAATCTGTAGGCAATaGCCTTTGCTGATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEKICRQ*PLLIFA
Trigger: TGCAAAGATCAGCAAAGGTCATTGCCTACAGATTTT...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp TCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCGAGTTGAGGAATCTCTaGGGTTGGGTTCTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRWLSHLQEGIHHFFFYSELRNL*GWVLCL
Trigger: GAGACAAAGAACCCAACCTCAGAGATTCCTCAACTC...GCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR GCA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACTTGGGCTTTCAATCATaGTCTGTGCATGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNLGFQS*SVHARS
Trigger: GCTACGAGCATGCACAGAGCATGATTGAAAGCCCAA...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR GCA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGCCATGGGTCAAGAACTaGTTTCAAAATCTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLPWVKN*FQNLVN
Trigger: ATTCACTAGATTTTGAAAGCAGTTCTTGACCCATGG...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGAGCCATTTGGACACGTaGAGAAAATCTGTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKSHLDT*RKSVGN
Trigger: ATTGCCTACAGATTTTCTCCACGTGTCCAAATGGCT...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp AACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTTCTGCCCTTCACCATTTCTaGCACTATGAGCTATGTGCA +
Preference number: 4 (lower is better)
Translates to: NIKPHAIMPLYTLPFTISALHHF*HYELCA
Trigger: TGCACATAGCTCATAGTGGCAGAAATGGTGAAGGGC...AGAAATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp GTCTCTGACTCTTTTATTTCCTGTCCAAGAAGATTTATAGCTAGGCTTGCTGGTTGCTGGTGTTCAGAATaGAGCTTTCCATGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VSDSFISCPRRFIARLAGCWCSE*SFPCLR
Trigger: CCTTAGGCATGGAAAGCTGCATTCTGAACACCAGCA...ACCAGCAAGCCTAGCTATAAATCTTCTTGGACAGGAAATAAAAGAGTCAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CCA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGCCAAAGGCAGGAAGATaGATTCGTATTTATATGTTT +
Preference number: 4 (lower is better)
Translates to: IPRLSIHSNLPHLACCLEPKAGR*IRIYMF
Trigger: AAACATATAAATACGAATCCATCTTCCTGCCTTTGG...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CCA 90 bp AACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTTCTAGGATGGCTCATTATTaGCTCCAAGGTCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: NIKPHAIMPLYTLPFTISRMAHY*LQGHSS
Trigger: AGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCT...AGAAATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp ATATTCATACTGCTTCTCCACTGTCTAAATTCTCACTCCACCAAAACTCAAAGTTGTGGACCTGTTCTTTaGCTTTTTGTCACCTGGCGA +
Preference number: 4 (lower is better)
Translates to: IFILLLHCLNSHSTKTQSCGPVL*LFVTWR
Trigger: TCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACA...ACTTTGAGTTTTGGTGGAGTGAGAATTTAGACAGTGGAGAAGCAGTATGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp ATATTCATACTGCTTCTCCACTGTCTAAATTCTCACTCCACCAAAACTCAAAGTTCAATACACCCTGGATaGGTGTTCCTCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: IFILLLHCLNSHSTKTQSSIHPG*VFLSSS
Trigger: GCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGA...ACTTTGAGTTTTGGTGGAGTGAGAATTTAGACAGTGGAGAAGCAGTATGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp CCAAAACTCAAAGTGATAAATGCTGCATTACAAGTGTGGTTTAAGCAAGAAAGACATCCGGGGAAGGAATaGAGGCTTCATGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: PKLKVINAALQVWFKQERHPGKE*RLHETS
Trigger: AGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATG...TCTTTCTTGCTTAAACCACACTTGTAATGCAGCATTTATCACTTTGAGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp AAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCACTGTCTCCAGCACATTTTGTGTaGTGCCATGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: KNCTNLKRVYIHTASPLSPAHFV*CHVHLL
Trigger: CAGAAGATGGACATGGCATCACACAAAATGTGCTGG...AGACAGTGGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp AAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCACTGTCTGGCAATGACCTTTGCTaGTCTTTGCAGGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: KNCTNLKRVYIHTASPLSGNDLC*SLQGFL
Trigger: GAGAAATCCCTGCAAAGATCAGCAAAGGTCATTGCC...AGACAGTGGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp AAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCACTGTCTCCATTTCTGCCACTATaGGCTATGTGCACAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KNCTNLKRVYIHTASPLSPFLPL*AMCTAR
Trigger: TCTAGCTGTGCACATAGCTCATAGTGGCAGAAATGG...AGACAGTGGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp CTGAAACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTTCCTCATGTCAGTATaGAAGAGCAATACTCTATTA +
Preference number: 4 (lower is better)
Translates to: LKHKASCHYATLYVALHHFLMSV*KSNTLL
Trigger: TAATAGAGTATTGCTCTTGCATACTGACATGAGGAA...ATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
3UTR CAA 72 bp ATGTCAGTATGCAAGAGCAATACTCTATTAATCAACTaGCTTGGTAGAGTAAGCACACTGCATTCCCATATG +
Preference number: 4 (lower is better)
Translates to: MSVCKSNTLLIN*LGRVSTLHSHM
Trigger: CATATGGGAATGCAGTGTGCTTACTCTACCAAGCAAGTTGATTAATAGAGTATTGCTCTTGCATACTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR TCA 90 bp CCAAAACTCAAAGTGATAAATGCTGCATTACAAGTGTGGTTTAAGCAAGAAAGAACTGAGCCTCTACAATaGCATCAGGACTGTCATTAT +
Preference number: 4 (lower is better)
Translates to: PKLKVINAALQVWFKQERTEPLQ*HQDCHY
Trigger: ATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGT...TCTTTCTTGCTTAAACCACACTTGTAATGCAGCATTTATCACTTTGAGTTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CCA 90 bp CCAAAACTCAAAGTGATAAATGCTGCATTACAAGTGTGGTTTAAGCAAGAAAGAATTCTCAATACACCCTaGATGAGTGTTCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKLKVINAALQVWFKQERILNTP*MSVPLF
Trigger: GAAGAGAGGAACACTCATCCAGGGTGTATTGAGAAT...TCTTTCTTGCTTAAACCACACTTGTAATGCAGCATTTATCACTTTGAGTTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp ATATTCATACTGCTTCTCCACTGTCTAAATTCTCACTCCACCAAAACTCAAAGTACTCAAAGTGATAAATaGTGCATTACAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: IFILLLHCLNSHSTKTQSTQSDK*CITSVV
Trigger: AACCACACTTGTAATGCAGCATTTATCACTTTGAGT...ACTTTGAGTTTTGGTGGAGTGAGAATTTAGACAGTGGAGAAGCAGTATGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR GCA 90 bp ATATTCATACTGCTTCTCCACTGTCTAAATTCTCACTCCACCAAAACTCAAAGTAAACATAAAGCCTCATaGCATTATGCCACTTTATAC +
Preference number: 4 (lower is better)
Translates to: IFILLLHCLNSHSTKTQSKHKAS*HYATLY
Trigger: GTATAAAGTGGCATAATGGCATGAGGCTTTATGTTT...ACTTTGAGTTTTGGTGGAGTGAGAATTTAGACAGTGGAGAAGCAGTATGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CCA 90 bp ATATTCATACTGCTTCTCCACTGTCTAAATTCTCACTCCACCAAAACTCAAAGTCTGAAACATCCTCCTTaGACATGTAAGTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: IFILLLHCLNSHSTKTQSLKHPP*TCKFQI
Trigger: TATTTGAAACTTACATGTCCAAGGAGGATGTTTCAG...ACTTTGAGTTTTGGTGGAGTGAGAATTTAGACAGTGGAGAAGCAGTATGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS GCA 90 bp GCGACGGTGGCCGGGCGAGGCCGAGAGCGAAGCGCGCGGGGTGTGTaGGCGGTGCAGGAGCTCGTAGTCGGCGGTTCAGCTGCGACAAGG +
Preference number: 5 (lower is better)
Translates to: ATVAGRGRERSARGV*AVQELVVGGSAATR
Trigger: CCTTGTCGCAGCTGAACCGCCGACTACGAGCTCCTGCACCGCGCACACACCCCGCGCGCTTCGCTCTCGGCCTCGCCCGGCCACCGTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp GCTCCCAGTGGGCGGCCTCTGAGACGCCTTGTGCCAGGCGCCGGCTaGCTCCGGGCCCCTCTTCCACCGGAAGGAGCCTTCCAGACCCGG +
Preference number: 5 (lower is better)
Translates to: APSGRPLRRLVPGAG*LRAPLPPEGAFQTR
Trigger: CCGGGTCTGGAAGGCTCCTTCCGGTGGAAGAGGGGCCCGGAGCCAGCCGGCGCCTGGCACAAGGCGTCTCAGAGGCCGCCCACTGGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp CGGCCTCGCTCGCGGGGACAACTGGCTGCAACGGTTGGCTCCCAGTaGGCGGCCTCTGAGACGCCTTGTGCCAGGCGCCGGCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: RPRSRGQLAATVGSQ*AASETPCARRRLAP
Trigger: CGGAGCCAGCCGGCGCCTGGCACAAGGCGTCTCAGAGGCCGCCCACTGGGAGCCAACCGTTGCAGCCAGTTGTCCCCGCGAGCGAGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp GAATGCTCTTCCGGGTCACGGGCGCGGCGTTCTAGAGAGCGACGGTaGCCGGGCGAGGCCGAGAGCGAAGCGCGCGGGGTGTGTGCGCGG +
Preference number: 5 (lower is better)
Translates to: ECSSGSRARRSRERR*PGEAESEARGVCAR
Trigger: CCGCGCACACACCCCGCGCGCTTCGCTCTCGGCCTCGCCCGGCCACCGTCGCTCTCTAGAACGCCGCGCCCGTGACCCGGAAGAGCATTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp GTGCAGGAGCTCGTAGTCGGCGGTTCAGCTGCGACAAGGGCGAAATaGCCAGGCCAGGGGCCGCCGCGCCTTCTCCGGCCTCGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: VQELVVGGSAATRAK*PGQGPPRLLRPRSR
Trigger: CCGCGAGCGAGGCCGGAGAAGGCGCGGCGGCCCCTGGCCTGGCCATTTCGCCCTTGTCGCAGCTGAACCGCCGACTACGAGCTCCTGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 90 bp GCGGGGTGTGTGCGCGGTGCAGGAGCTCGTAGTCGGCGGTTCAGCTaGGACAAGGGCGAAATGGCCAGGCCAGGGGCCGCCGCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AGCVRGAGARSRRFS*DKGEMARPGAAAPS
Trigger: AGAAGGCGCGGCGGCCCCTGGCCTGGCCATTTCGCCCTTGTCGCAGCTGAACCGCCGACTACGAGCTCCTGCACCGCGCACACACCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp CTCCTCCACGAGCCTGCAGAGGGTGGGTGGGATGGGAGGGACCGCTaGGGTTTGGGGACAGGTGCGCAGGCTTTCCCACGCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLHEPAEGGWDGRDR*GLGTGAQAFPRCSR
Trigger: CCGGCTGCAGCGTGGGAAAGCCTGCGCACCTGTCCCCAAACCCCAGCGGTCCCTCCCATCCCACCCACCCTCTGCAGGCTCGTGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 90 bp TCCGGGCCCCTCTTCCACCGGAAGGAGCCTTCCAGACCCGGCTCCTaGACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: SGPLFHRKEPSRPGS*TSRLCSTGPGLARQ
Trigger: CTGCCGTGCAAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAGGAGCCGGGTCTGGAAGGCTCCTTCCGGTGGAAGAGGGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 90 bp ACCCGGCTCCTGAACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTTaGACGGCAGACGCCGCCGGCCCCTTTCCTGTTACAAGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TRLLNLQALLHWARS*TADAAGPFPVTRLC
Trigger: GCAAAGCCTTGTAACAGGAAAGGGGCCGGCGGCGTCTGCCGTGCAAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAGGAGCCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 90 bp GTTGGCCAAGAGCATGAACTCCTCCACGAGCCTGCAGAGGGTGGGTaGGATGGGAGGGACCGCTGGGGTTTGGGGACAGGTGCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VGQEHELLHEPAEGG*DGRDRWGLGTGAQA
Trigger: AGCCTGCGCACCTGTCCCCAAACCCCAGCGGTCCCTCCCATCCCACCCACCCTCTGCAGGCTCGTGGAGGAGTTCATGCTCTTGGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTCCGGCGCAGCAGGGCTaGTTGCTCTCGCGGTACTCA +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRPAQQG*LLSRYS
Trigger: TGAGTACCGCGAGAGCAACAAGCCCTGCTGCGCCGG...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390005.9
CDS GCA 90 bp CAGCAGGGCCTGCTCGGGGAAGGCGCGGTGGATCTTGTGGGCCACTaGCATGTTGGCCAAGAGCATGAACTCCTCCACGAGCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QQGLLGEGAVDLVGH*HVGQEHELLHEPAE
Trigger: CTCTGCAGGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS GCA 90 bp GCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCTGGAGTaGAAACACCAAGCCTCAGGCCTCAGCTCTGGATGCTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: AHLLEVVGPQGQCLE*KHQASGLSSGCCCL
Trigger: CAGGCAGCAGCATCCAGAGCTGAGGCCTGAGGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCCCGTCAGCGAGTGGCTaGCAGGAGAGGGCATCATCG +
Preference number: 5 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSPSASG*QERASS
Trigger: CGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCAGAGCTCAGCTGGTGCTaGAGTCCTCGGGCTCACCGT +
Preference number: 5 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAELSWC*SPRAHR
Trigger: ACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTC...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGAGCTCAGCTGGTGCTaGAGTCCTCGGGCTCACCGT +
Preference number: 5 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSELSWC*SPRAHR
Trigger: ACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS TCA 90 bp CCCCATGGTCTCCCTGCACCAGTTGGTCTACACCGCCTTCTCCTCTaGCTGGTTAGCTCCTGTGCTGGCTCTCCCAGAGGGGGACCCTGG +
Preference number: 5 (lower is better)
Translates to: PHGLPAPVGLHRLLL*LVSSCAGSPRGGPW
Trigger: CCAGGGTCCCCCTCTGGGAGAGCCAGCACAGGAGCTAACCAGTCAGAGGAGAAGGCGGTGTAGACCAACTGGTGCAGGGAGACCATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 90 bp AGGCGCGGTGGATCTTGTGGGCCACTGCCATGTTGGCCAAGAGCATaGACTCCTCCACGAGCCTGCAGAGGGTGGGTGGGATGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RRGGSCGPLPCWPRA*TPPRACRGWVGWEG
Trigger: TCCCTCCCATCCCACCCACCCTCTGCAGGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS GCA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTaGCTGGAGTGCAAACACCAAGCCTCAGGCCTCAGCTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: RLLAHLLEVVGPQGQ*LECKHQASGLSSGC
Trigger: GCATCCAGAGCTGAGGCCTGAGGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp TCAGGCTCCCAGACCAGCGTGAGTTCCGGCTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGGGCCAGTGCCTGGAGTGCAAACACC +
Preference number: 5 (lower is better)
Translates to: SGSQTSVSSGFLPTF*KWWDRRASAWSANT
Trigger: GGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGACTCCTCTGGTGGAATaGTCCATGGCAGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRTPLVE*SMAGLE
Trigger: CTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS GCA 90 bp AGAGCTGGAGCCTGTTGTGATGGGCCAGCCTTGGGCATGTCCTCATaGCTTGGTGACCAGGACCCTCTTCATGGGGAAAGCCGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: RAGACCDGPALGMSS*LGDQDPLHGESRPL
Trigger: GAGGGGGCGGCTTTCCCCATGAAGAGGGTCCTGGTCACCAAGGCATGAGGACATGCCCAAGGCTGGCCCATCACAACAGGCTCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp CAGACCAGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCCTGGAGTGCAAACACCAAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QTSVSSGFLPTFWKW*DRRASAWSANTKPQ
Trigger: CTGAGGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp TCCCAGACCAGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTaGTGGGACCGCAGGGCCAGTGCCTGGAGTGCAAACACCAAGCCT +
Preference number: 5 (lower is better)
Translates to: SQTSVSSGFLPTFWK*WDRRASAWSANTKP
Trigger: AGGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGCCGCAGTCCCGCAGTaGCTAAGGAGAATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRAAVPQ*LRRMLF
Trigger: GAAGAGCATTCTCCTTAGCAACTGCGGGACTGCGGC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCTCAGAGTTCCCGCCTaGAGCAGCTCTGTTGTCATT +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLRVPA*SSSVVI
Trigger: AATGACAACAGAGCTGCTCAAGGCGGGAACTCTGAG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCTGGGTCAGGCTTTTATaGAGGGCTCCTGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAWVRLL*RAPAEL
Trigger: CAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCA...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTTGGGTCAGGCTTTTATaGAGGGCTCCTGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRWVRLL*RAPAEL
Trigger: CAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCA...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTCAGCTGGTGCTTGAGTCCTCGGGCTCACCGTCAGACTCCTCCGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: AGGAQLVLESSGSPSDSSVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...GGAGGAGTCTGACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000417808.1
ENST00000433430.5
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TGCCGTCAGCGAGTGGCTTGCAGGAGAGGGCATCATCGAGGTCTCGGGCGGTTGTTTGGCATCCTGGCCTaGCCCTCTGGAGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: CRQRVACRRGHHRGLGRLFGILA*PSGVSV
Trigger: GACACTGACTCCAGAGGGCAAGGCCAGGATGCCAAA...CAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS TCA 90 bp TGGCTGCAGCCAGAACCCTGCCATCAACTTCCCTTCCTGGAGGTGTaGGTAGTGCTGCGGGTGAGCCTCGTCATCTGGCCATGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: WLQPEPCHQLPFLEV*VVLRVSLVIWPCSW
Trigger: CCACGAGCATGGCCAGATGACGAGGCTCACCCGCAGCACTACTCACACCTCCAGGAAGGGAAGTTGATGGCAGGGTTCTGGCTGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp ATGGTCTCCCTGCACCAGTTGGTCTACACCGCCTTCTCCTCTGACTaGTTAGCTCCTGTGCTGGCTCTCCCAGAGGGGGACCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: MVSLHQLVYTAFSSD*LAPVLALPEGDPGE
Trigger: CTCTCCAGGGTCCCCCTCTGGGAGAGCCAGCACAGGAGCTAACCAGTCAGAGGAGAAGGCGGTGTAGACCAACTGGTGCAGGGAGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp TTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCTaGAGTGCAAACACCAAGCCTCAGGCCTCAGCTCTGGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: FLPTFWKWWDRRASA*SANTKPQASALDAA
Trigger: AGCAGCATCCAGAGCTGAGGCCTGAGGCTTGGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCAGGATGGCTCATTATaGGCTCCAAGGTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRQDGSL*APRSLF
Trigger: GAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CAA 90 bp GAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGCTTTTCAGGGACTGTaGCGGGAGATGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: EFRLLAHLLEVVGPQGQCAFQGL*REMVST
Trigger: TGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGC...GCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGTGCCCCAGGGCAAAATaGCAGTCCTCCTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQCPRAK*QSSFQS
Trigger: GGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCA...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGTTGTCGGACATGGGGTaGAGGCTGCACAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQLSDMG*RLHSSS
Trigger: TGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAA...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGGAGCTCAGCTGGTGCTaGAGTCCTCGGGCTCACCGT +
Preference number: 5 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGELSWC*SPRAHR
Trigger: ACGGTGAGCCCGAGGACTCAAGCACCAGCTGAGCTC...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS TCA 90 bp CCAGATCCAGAGAAACCTCCACTGCTTAGCTCAGAGTTCCCGCCTTaGGCAGCTCTGTTGTCATTCGCGTTTCTCCCCGGAGGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: PDPEKPPLLSSEFPP*AALLSFAFLPGGRR
Trigger: GCGCCGGCCTCCGGGGAGAAACGCGAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTGGATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000445090.5
CDS GCA 90 bp ACCTCCCAGCTACCTCATCTCATGTGTTCCGCCAAGTCCCTGTCTTaGCCAGCACCCCCATGGTCTCCCTGCACCAGTTGGTCTACACCG +
Preference number: 5 (lower is better)
Translates to: TSQLPHLMCSAKSLS*PAPPWSPCTSWSTP
Trigger: CGGTGTAGACCAACTGGTGCAGGGAGACCATGGGGGTGCTGGGCAAGACAGGGACTTGGCGGAACACATGAGATGAGGTAGCTGGGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGCTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRLFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAG...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQTEKVS*SDMGLR
Trigger: CCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGT...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCTGCTGGCGTAACTGCTaGGCAATTCCGTGGAGATTC +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRACWRNC*AIPWRF
Trigger: GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCA...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCATCCTGTGCGTCTACATaGGGCTGTACAGTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVASCAST*GCTVCL
Trigger: AAGGCAGACTGTACAGCCCAATGTAGACGCACAGGA...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS GCA 90 bp GGAATCTCTGAGGTTGGGTTCTTTGTCTCCTGCTGTGCTGGCTCCTaGTCCATGTCCTCAGGCTCCCAGACCAGCGTGAGTTCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: GISEVGFFVSCCAGS*SMSSGSQTSVSSGF
Trigger: GAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACATGGAGCAGGAGCCAGCACAGCAGGAGACAAAGAACCCAACCTCAGAGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS CCA 90 bp CATCTCATGTGTTCCGCCAAGTCCCTGTCTTGCCCAGCACCCCCATaGTCTCCCTGCACCAGTTGGTCTACACCGCCTTCTCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: HLMCSAKSLSCPAPP*SPCTSWSTPPSPLT
Trigger: AGTCAGAGGAGAAGGCGGTGTAGACCAACTGGTGCAGGGAGACCATGGGGGTGCTGGGCAAGACAGGGACTTGGCGGAACACATGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCAGGATGGCTCATTATaGGCTCCAAGGTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAQDGSL*APRSLF
Trigger: GAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGATCAACCAGCACATTTaGTGTGATGCCATGTCCATC +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRINQHI*CDAMSI
Trigger: GATGGACATGGCATCACACAAAATGTGCTGGTTGAT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTTATCAGCCAAGAGTTaGAGGAAGCCGGTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRLSAKS*RKPVAA
Trigger: AGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATAA...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCATGGGGACCACCTTTaGAACCAAGTAGACGCTTGT +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAHGDHL*NQVDAC
Trigger: ACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTTGCACATTCATCAAGGATCTaGCCCTCTGGAGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RLLAHLLEVVGPQGQCVAHSSRI*PSGVSV
Trigger: GACACTGACTCCAGAGGGCAAGATCCTTGATGAATG...TGCAACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000445090.5
CDS-3UTR CAA 90 bp GTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCGGAGATGTAAACCACCTTaGCTGATCTTTGCAGGGATT +
Preference number: 5 (lower is better)
Translates to: VAPYSLTRQPGGGAPGRRRCKPP*LIFAGI
Trigger: AATCCCTGCAAAGATCAGCAAAGGTGGTTTACATCT...CCGACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp CTAGTCGCTCCCTATAGCCTAACGCGGCAGCCAGGAGGCGGTGCACCAGGACGTCTTAAATCCCTTCTCTaGCTGAACTCCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LVAPYSLTRQPGGGAPGRLKSLL*LNSSGG
Trigger: TCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAG...ACGTCCTGGTGCACCGCCTCCTGGCTGCCGCGTTAGGCTATAGGGAGCGACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCCTTAAATCCCTTCTCTaGCTGAACTCCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRALKSLL*LNSSGG
Trigger: TCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAG...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACATGGGGTTGAGCCGTCAGCGAGTGGCTaGCAGGAGAGGGCATCATCG +
Preference number: 5 (lower is better)
Translates to: WSQCPDHREGQLVGHGVEPSASG*QERASS
Trigger: CGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG...CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GATCTTGCCCTCTGGAGTCAGTGTCCAGATCACAGAGAAGGTCAGCTTGTCGGACCGTCAGCGAGTGGCTaGCAGGAGAGGGCATCATCG +
Preference number: 5 (lower is better)
Translates to: DLALWSQCPDHREGQLVGPSASG*QERASS
Trigger: CGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG...TCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCATGGGGACCACCTTTaGAACCAAGTAGACGCTTGT +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQHGDHL*NQVDAC
Trigger: ACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TCCTGCGGAGCTGAAGTCCACGGGCAGCCCCATCTGGTCGCAGAATTCCACCAGCATTCATCAAGGATCTaGCCCTCTGGAGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SCGAEVHGQPHLVAEFHQHSSRI*PSGVSV
Trigger: GACACTGACTCCAGAGGGCAAGATCCTTGATGAATG...CTGGTGGAATTCTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTATAGATATGACATCCTaGAGGCAATCCGGTCTCGTG +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRIDMTS*RQSGLV
Trigger: CACGAGACCGGATTGCCTCAAGGATGTCATATCTAT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GGTGGACTGCTTGATGTCAGGAGTTTGGCATCCTGGCCTTGCCCTCTGGAGTCATGGGTCAGGCTTTTATaGAGGGCTCCTGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GGLLDVRSLASWPCPLESWVRLL*RAPAEL
Trigger: CAGCTCCGCAGGAGCCCTCAATAAAAGCCTGACCCA...TGACTCCAGAGGGCAAGGCCAGGATGCCAAACTCCTGACATCAAGCAGTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp AGCGTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCATGACCTCTTCATTCTaGTGGTCTCAAGGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: SVSSGFLPTFWKWWDRRAMTSSF*WSQGFP
Trigger: GGGAAACCCTTGAGACCACAAGAATGAAGAGGTCAT...GGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp CCAGCTGCCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGGCGCAGCAGGGCCTGTaGTTGCTCTCGCGGTACTCA +
Preference number: 5 (lower is better)
Translates to: PAAHTQRKGLDPLSKGRKAQQGL*LLSRYS
Trigger: TGAGTACCGCGAGAGCAACAACAGGCCCTGCTGCGC...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS GCA 90 bp TGGCTCCAAGGTCACTCTTCTCTCCAGATCCAGAGAAACCTCCACTaGTTAGCTCAGAGTTCCCGCCTTGAGCAGCTCGTTTCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: WLQGHSSLQIQRNLH*LAQSSRLEQLVSPR
Trigger: CCGGGGAGAAACGAGCTGCTCAAGGCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441279.5
CDS-3UTR CAA 90 bp GTGCACCAGGACGTCGGCAAAGCGGCGGATGGGCGAGGTGAAGTGTGTGTACAGCTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: VHQDVGKAADGRGEVCVQLFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAG...CTGTACACACACTTCACCTCGCCCATCCGCCGCTTTGCCGACGTCCTGGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACGCTTTTCAGGGACTGTaGCGGGAGATGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: DACSPLGSHFIQIRSLRNAFQGL*REMVST
Trigger: TGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGC...GTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCGTATCAACCAGCACATTTaGTGTGATGCCATGTCCATC +
Preference number: 5 (lower is better)
Translates to: VPASCPPSGSGGTAGPVRINQHI*CDAMSI
Trigger: GATGGACATGGCATCACACAAAATGTGCTGGTTGAT...ACGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390005.9
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CGTAACTGCTTGGCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGGCTTTTCAGGGACTGTaGCGGGAGATGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: RNCLAIPWRFKTAWCTSSAFQGL*REMVST
Trigger: TGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGC...CGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CCTCTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: PLGSHFIQIRSLRNKVTHRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...GTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS GCA 90 bp GCACTTCTTTTTCCCGCCTTTGGTGGGACAAGAAGATCACACATGTaGACAAGAGCTGGAGCCTGTTGTGATGGGCCAGCCTTGGGCATG +
Preference number: 5 (lower is better)
Translates to: ALLFPAFGGTRRSHM*TRAGACCDGPALGM
Trigger: CATGCCCAAGGCTGGCCCATCACAACAGGCTCCAGCTCTTGTGCACATGTGTGATCTTCTTGTCCCACCAAAGGCGGGAAAAAGAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 90 bp CCCCAGGGGCCGGAGGTTCATTCTGTAGTCAGGATGGCTCATTATTaGCTCCAAGGTCACTCTTCTCTCCAGATCCAGAGAAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PQGPEVHSVVRMAHY*LQGHSSLQIQRNLH
Trigger: GTGGAGGTTTCTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTGACTACAGAATGAACCTCCGGCCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000441279.5
ENST00000445090.5
CDS CCA 90 bp CAAATCTGGGGCAGGAGGCCACGCACTTCTTTTTCCCGCCTTTGGTaGGACAAGAAGATCACACATGTGCACAAGAGCTGGAGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: QIWGRRPRTSFSRLW*DKKITHVHKSWSLL
Trigger: CAACAGGCTCCAGCTCTTGTGCACATGTGTGATCTTCTTGTCCCACCAAAGGCGGGAAAAAGAAGTGCGTGGCCTCCTGCCCCAGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS-3UTR CAA 90 bp GCGCCGTCCACAAAGCGCTGCTGGCGTAACTGCTTGGCAATTCCGTGGAGATTCCTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: APSTKRCWRNCLAIPWRFLFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAG...GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGATAGATATGACATCCTaGAGGCAATCCGGTCTCGTG +
Preference number: 5 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGIDMTS*RQSGLV
Trigger: CACGAGACCGGATTGCCTCAAGGATGTCATATCTAT...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS GCA 90 bp TGGCTCCAAGGTCACTCTTCTCTCCAGATCCAGAGAAACCTCCACTaGTTAGCTCAGAGTTCCCGCCTTGAGCAGCTCTGTTGTCATTCG +
Preference number: 5 (lower is better)
Translates to: WLQGHSSLQIQRNLH*LAQSSRLEQLCCHS
Trigger: CGAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000445090.5
CDS-3UTR CAA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCACTCCTCTGGTGGAATaGTCCATGGCAGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVTPLVE*SMAGLE
Trigger: CTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGT...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTCATGGGGACCACCTTTaGAACCAAGTAGACGCTTGT +
Preference number: 5 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSHGDHL*NQVDAC
Trigger: ACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATG...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TCAATTTCACCAGCCTGCCCAAGACTCTTAGCCAGCTGCCCACACTCAAAGAAATTGTCGGACATGGGGTaGAGGCTGCACAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SISPACPRLLASCPHSKKLSDMG*RLHSSS
Trigger: TGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAA...TTTCTTTGAGTGTGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CAA 90 bp CACTGCACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HCTLIGHLLSHKPWVKNCTEKVS*SDMGLR
Trigger: CCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGT...GCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp CACCTTTTGAACCAAGTAGACGCTTGTAGCCCTCTCGGCAGCCACTTTATCCAGACAGAGAAGGTCAGCTaGTCGGACATGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HLLNQVDACSPLGSHFIQTEKVS*SDMGLR
Trigger: CCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGT...CTGGATAAAGTGGCTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAAGGATGGCGCTGTACTaGAGGGCTGTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQRMALY*RAVDSA
Trigger: GGCAGAGTCCACAGCCCTCAAGTACAGCGCCATCCT...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp TTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTGGGGTCAGGTGAAAGCCATTaGGACACGTGGAGAAAATCT +
Preference number: 5 (lower is better)
Translates to: FRGDSRRPGVPPRCYALGSGESH*DTWRKS
Trigger: AGATTTTCTCCACGTGTCCAAATGGCTTTCACCTGA...CCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CAA 90 bp CTCGGCAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGGCGGGTGGACTGCTaGATGTCAGGAGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LGSHFIQIRSLRNKVTHVRRVDC*MSGVWH
Trigger: ATGCCAAACTCCTGACATCAAGCAGTCCACCCGCCT...GACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp CAGCCACTTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAAGCCGCAGTCCCGCAGTaGCTAAGGAGAATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QPLYPDQIPPEQSNSRQQAAVPQ*LRRMLF
Trigger: GAAGAGCATTCTCCTTAGCAACTGCGGGACTGCGGC...TTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445090.5
CDS-3UTR CAA 90 bp CTGTGCGTCTACATTGGGCTGTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCCTTAAATCCCTTCTCTaGCTGAACTCCTCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LCVYIGLYSLPSACSGNVLKSLL*LNSSGG
Trigger: TCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAG...GACGTTCCCTGAGCATGCTGAAGGCAGACTGTACAGCCCAATGTAGACGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp GCAATTCCGTGGAGATTCAAGACGGCCTGGTGTACCTCCTCGCTGCTATGCTCTCAGGGCAGAGATGGCTaGGTCTCTGACTCTTTTATT +
Preference number: 5 (lower is better)
Translates to: AIPWRFKTAWCTSSLLCSQGRDG*VSDSFI
Trigger: AATAAAAGAGTCAGAGACCAAGCCATCTCTGCCCTG...AGAGCATAGCAGCGAGGAGGTACACCAGGCCGTCTTGAATCTCCACGGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS TCA 90 bp ACCTTTCACAGCGAGGGCACCAGAAGAGGCTTCAGAGATGGTATCTaGCCTAGTCTCAAACTGCACCAATCCATGGCCTGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: TFHSEGTRRGFRDGI*PSLKLHQSMAWLKH
Trigger: ATGTTTGAGCCAGGCCATGGATTGGTGCAGTTTGAGACTAGGTCAGATACCATCTCTGAAGCCTCTTCTGGTGCCCTCGCTGTGAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470087.1
CDS-3UTR CAA 90 bp ATCCCCAGGCTTTCCATTCATTCTAATCTCCCACACTTAGCATGCTGCCTGGAGCTCAGAGTTCCCGCCTaGAGCAGCTCTGTTGTCATT +
Preference number: 5 (lower is better)
Translates to: IPRLSIHSNLPHLACCLELRVPA*SSSVVI
Trigger: AATGACAACAGAGCTGCTCAAGGCGGGAACTCTGAG...CTCCAGGCAGCATGCTAAGTGTGGGAGATTAGAATGAATGGAAAGCCTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CAA 90 bp GGGCAGCCCCATCTGGTCGCAGAATTCCACCAGGTCACTGAGCATCCTTGTTTGAGATGTAAACCACCTTaGCTGATCTTTGCAGGGATT +
Preference number: 5 (lower is better)
Translates to: GQPHLVAEFHQVTEHPCLRCKPP*LIFAGI
Trigger: AATCCCTGCAAAGATCAGCAAAGGTGGTTTACATCT...CAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCAGATGGGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAATGCCCCAGGGCAAAATaGCAGTCCTCCTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQCPRAK*QSSFQS
Trigger: GGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCA...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp ACCCTGATCGGGCATTTGCTTTCACATAAGCCATGGGTCAAGAACTGCTTTCAATTGTCGGACATGGGGTaGAGGCTGCACAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TLIGHLLSHKPWVKNCFQLSDMG*RLHSSS
Trigger: TGAGGAGCTGTGCAGCCTCAACCCCATGTCCGACAA...TTGAAAGCAGTTCTTGACCCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGACCCTGATCGGGCATTaGCTTTCACATAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLTLIGH*LSHKPW
Trigger: CCATGGCTTATGTGAAAGCAAATGCCCGATCAGGGT...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS TCA 90 bp GGGACAGTCCTTGAGAGGCACATAAATTCTAGGCACTCGGTGGTCTaGGGGAGAAAACAGGGCGTATTTCCTAAACAGTTCGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GTVLERHINSRHSVV*GRKQGVFPKQFAVL
Trigger: AAGAACAGCGAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTTATGTGCCTCTCAAGGACTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000433430.5
CDS GCA 90 bp CACAATGCGGCAGATGAACAGTGTGTTGGCATAATCTTTAGGCCGTaGCACAAAGTCCTGGGGACAGTCCTTGAGAGGCACATAAATTCT +
Preference number: 5 (lower is better)
Translates to: HNAADEQCVGIIFRP*HKVLGTVLERHINS
Trigger: AGAATTTATGTGCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGCCGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000433430.5
CDS-3UTR CAA 90 bp TGGAATGACAGGGCCATGACCTCTTCATTCTTGTGGTCTCAAGGGTTTCCCCTGATCAACCAGCACATTTaGTGTGATGCCATGTCCATC +
Preference number: 5 (lower is better)
Translates to: WNDRAMTSSFLWSQGFPLINQHI*CDAMSI
Trigger: GATGGACATGGCATCACACAAAATGTGCTGGTTGAT...CAGGGGAAACCCTTGAGACCACAAGAATGAAGAGGTCATGGCCCTGTCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGAACTCCTCCACGAGCTaGTTGCTCTCGCGGTACTCA +
Preference number: 5 (lower is better)
Translates to: LSMAGLEEDILELLKRNQNSSTS*LLSRYS
Trigger: TGAGTACCGCGAGAGCAACAAGCTCGTGGAGGAGTT...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp AACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTTCTGCCGCAGTCCCGCAGTaGCTAAGGAGAATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NIKPHAIMPLYTLPFTISAAVPQ*LRRMLF
Trigger: GAAGAGCATTCTCCTTAGCAACTGCGGGACTGCGGC...AGAAATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CAA 90 bp CAACATACCCACACTCAAAGAAAAGGCCTTGACCCCTTATCCAAAGGCAGGAAGCTGTTCTTTGACTTTTaGTCACCTGGCGAAGCACCA +
Preference number: 5 (lower is better)
Translates to: QHTHTQRKGLDPLSKGRKLFFDF*SPGEAP
Trigger: TGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAG...CTTCCTGCCTTTGGATAAGGGGTCAAGGCCTTTTCTTTGAGTGTGGGTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CAA 90 bp TTGTCCATGGCAGGCCTTGAGGAAGACATTCTAGAACTTCTGAAGAGAAATCAGTGCTGGCGTAACTGCTaGGCAATTCCGTGGAGATTC +
Preference number: 5 (lower is better)
Translates to: LSMAGLEEDILELLKRNQCWRNC*AIPWRF
Trigger: GAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCA...CTGATTTCTCTTCAGAAGTTCTAGAATGTCTTCCTCAAGGCCTGCCATGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433430.5
ENST00000445090.5
CDS-3UTR CAA 90 bp GTACAGTCTGCCTTCAGCATGCTCAGGGAACGTCAGTTTCAGTTCTATTCCACTATAGATATGACATCCTaGAGGCAATCCGGTCTCGTG +
Preference number: 5 (lower is better)
Translates to: VQSAFSMLRERQFQFYSTIDMTS*RQSGLV
Trigger: CACGAGACCGGATTGCCTCAAGGATGTCATATCTAT...AGTGGAATAGAACTGAAACTGACGTTCCCTGAGCATGCTGAAGGCAGACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp GTCTCTGACTCTTTTATTTCCTGTCCAAGAAGATTTATAGCTAGGCTTGCTGGTTGGGCCACTGCCATGTaGGCCAAGAGCATGAACTCC +
Preference number: 5 (lower is better)
Translates to: VSDSFISCPRRFIARLAGWATAM*AKSMNS
Trigger: GGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCA...ACCAGCAAGCCTAGCTATAAATCTTCTTGGACAGGAAATAAAAGAGTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS-3UTR CAA 90 bp TTTCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: FHDGFLTSRKAFIISFSTVSSGF*PTFWKW
Trigger: CCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC...TGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS-3UTR CAA 90 bp TTCACGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTGAGGTTGGGTTCTTaGTCTCCTGCTGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: FTMAFSPPGRHSSFLFLQLRLGS*SPAVLA
Trigger: AGCCAGCACAGCAGGAGACAAAGAACCCAACCTCAG...CTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS TCA 90 bp AACACCATCAACCAGCACATTTTGTGTGATGCCATGTCCATCTTCTaGGTCGCTGCCATCAAACTGAGCCTCTACAATGACATCAGGACT +
Preference number: 5 (lower is better)
Translates to: NTINQHILCDAMSIF*VAAIKLSLYNDIRT
Trigger: AGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGGCATCACACAAAATGTGCTGGTTGATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000445090.5
ENST00000464554.5
ENST00000470087.1
CDS-3UTR CAA 90 bp TTTATCCAGATCAGATCCCTCCGGAACAAAGTAACTCACGTCAGCAATGTGAACTTATCAGCCAAGAGTTaGAGGAAGCCGGTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FIQIRSLRNKVTHVSNVNLSAKS*RKPVAA
Trigger: AGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATAA...GTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433430.5
CDS TCA 90 bp AGTTTCAAATATGCTCTTTTTCTTCCCTCGTGTGGACCTGTTCTTTaGCTTTTTGTCACCTGGCGAAGCACCAATGTCATGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: SFKYALFLPSCGPVL*LFVTWRSTNVMWTS
Trigger: GCTGGTCCACATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTTGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
CDS-3UTR CAA 90 bp CGATGGCTTTCTCACCTCCAGGAAGGCATTCATCATTTCTTTTTCTACAGCTTTGAGGAATCTCTGAGGTaGGGTTCTTTGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RWLSHLQEGIHHFFFYSFEESLR*GSLSPA
Trigger: AGCAGGAGACAAAGAACCCAACCTCAGAGATTCCTC...AAAGCTGTAGAAAAAGAAATGATGAATGCCTTCCTGGAGGTGAGAAAGCCATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS CCA 90 bp TGCGGGCACTCAGAAGATGGTAGCTCCCATCATGATTATGGTACATaGATCATAAAGTCTAGATGTCGTGAACAAGAGTATAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: CGHSEDGSSHHDYGT*IIKSRCREQEYSLA
Trigger: TGCAAGGCTATACTCTTGTTCACGACATCTAGACTTTATGATCCATGTACCATAATCATGATGGGAGCTACCATCTTCTGAGTGCCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS-3UTR CAA 90 bp TTGGAGCAAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCGCTTTTCAGGGACTGTaGCGGGAGATGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LEQKLYKSEESLYSYCFSAFQGL*REMVST
Trigger: TGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGC...GGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTTGCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS GCA 90 bp CTGACATGTTTAATGCTCTTCATAGCTATCACTGTTCTTCATTGTTaGTCTCGCGGTACTCATAGATATGACATCCTTGAGGCAATCCGG +
Preference number: 5 (lower is better)
Translates to: LTCLMLFIAITVLHC*SRGTHRYDILEAIR
Trigger: CCGGATTGCCTCAAGGATGTCATATCTATGAGTACCGCGAGAGCAACAATGAAGAACAGTGATAGCTATGAAGAGCATTAAACATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS-3UTR CAA 90 bp CTGAAACATAAAGCCTCATGCCATTATGCCACTTTATACGTTGCCCTTCACCATTCAGGTGAAAGCCATTaGGACACGTGGAGAAAATCT +
Preference number: 5 (lower is better)
Translates to: LKHKASCHYATLYVALHHSGESH*DTWRKS
Trigger: AGATTTTCTCCACGTGTCCAAATGGCTTTCACCTGA...ATGGTGAAGGGCAACGTATAAAGTGGCATAATGGCATGAGGCTTTATGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CAA 90 bp AAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCACTGTCTCAGGATGGCTCATTATaGGCTCCAAGGTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: KNCTNLKRVYIHTASPLSQDGSL*APRSLF
Trigger: GAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTG...AGACAGTGGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS-3UTR CAA 90 bp TTGGAGCAAAAACTGTACAAATCTGAAGAGAGTCTATATTCATACTGCTTCTCCATCAACCAGCACATTTaGTGTGATGCCATGTCCATC +
Preference number: 5 (lower is better)
Translates to: LEQKLYKSEESLYSYCFSINQHI*CDAMSI
Trigger: GATGGACATGGCATCACACAAAATGTGCTGGTTGAT...GGAGAAGCAGTATGAATATAGACTCTCTTCAGATTTGTACAGTTTTTGCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409401.7
CDS TCA 90 bp AATTCTCAATACACCCTGGATGAGTGTTCCTCTCTTCAAGCCTTCTaGAACATCCTCCTTGGACATGTAAGTTTCAAATATGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: NSQYTLDECSSLQAF*NILLGHVSFKYALF
Trigger: AAAAAGAGCATATTTGAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
CDS CCA 72 bp TCCGGGTCACGGGCGCGGCGTTCTAGAGAGCGACGGTaGCCGGGCGAGGCCGAGAGCGAAGCGCGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: SGSRARRSRERR*PGEAESEARGV
Trigger: CACCCCGCGCGCTTCGCTCTCGGCCTCGCCCGGCCACCGTCGCTCTCTAGAACGCCGCGCCCGTGACCCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 72 bp GCCGGGCGAGGCCGAGAGCGAAGCGCGCGGGGTGTGTaGGCGGTGCAGGAGCTCGTAGTCGGCGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: AGRGRERSARGV*AVQELVVGGSA
Trigger: AGCTGAACCGCCGACTACGAGCTCCTGCACCGCGCACACACCCCGCGCGCTTCGCTCTCGGCCTCGCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 72 bp GTGCGCGGTGCAGGAGCTCGTAGTCGGCGGTTCAGCTaGGACAAGGGCGAAATGGCCAGGCCAGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: VRGAGARSRRFS*DKGEMARPGAA
Trigger: GGCGGCCCCTGGCCTGGCCATTTCGCCCTTGTCGCAGCTGAACCGCCGACTACGAGCTCCTGCACCGCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 72 bp CTCGTAGTCGGCGGTTCAGCTGCGACAAGGGCGAAATaGCCAGGCCAGGGGCCGCCGCGCCTTCTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: LVVGGSAATRAK*PGQGPPRLLRP
Trigger: AGGCCGGAGAAGGCGCGGCGGCCCCTGGCCTGGCCATTTCGCCCTTGTCGCAGCTGAACCGCCGACTACGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CAA 72 bp TTCTCCCCGGAGGCCGGCGCCGCCGCAGTCCCGCAGTaGCTAAGGAGAATGCTCTTCCGGGTCACGGGCGCG +
Preference number: 6 (lower is better)
Translates to: FSPEAGAAAVPQ*LRRMLFRVTGA
Trigger: CGCGCCCGTGACCCGGAAGAGCATTCTCCTTAGCAACTGCGGGACTGCGGCGGCGCCGGCCTCCGGGGAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273009.10
ENST00000390005.9
ENST00000409401.7
CDS CCA 72 bp GAGCCTGCAGAGGGTGGGTGGGATGGGAGGGACCGCTaGGGTTTGGGGACAGGTGCGCAGGCTTTCCCACGC +
Preference number: 6 (lower is better)
Translates to: EPAEGGWDGRDR*GLGTGAQAFPR
Trigger: GCGTGGGAAAGCCTGCGCACCTGTCCCCAAACCCCAGCGGTCCCTCCCATCCCACCCACCCTCTGCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CAA 72 bp TCCGGCCTCGCTCGCGGGGACAACTGGCTGCAACGGTaGGCTCCCAGTGGGCGGCCTCTGAGACGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: SGLARGDNWLQR*APSGRPLRRLV
Trigger: CACAAGGCGTCTCAGAGGCCGCCCACTGGGAGCCAACCGTTGCAGCCAGTTGTCCCCGCGAGCGAGGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CAA 72 bp CCTGAACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTaGCACGGCAGACGCCGCCGGCCCCTTTCCTGTTAC +
Preference number: 6 (lower is better)
Translates to: PEPPGSAPLGQV*HGRRRRPLSCY
Trigger: GTAACAGGAAAGGGGCCGGCGGCGTCTGCCGTGCAAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CAA 90 bp GACCCGGCTCCTGAACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTaGCACGGCAGACGCCGCCGGCCCCTTTCCTGTTACAAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: DPAPEPPGSAPLGQV*HGRRRRPLSCYKAL
Trigger: CAAAGCCTTGTAACAGGAAAGGGGCCGGCGGCGTCTGCCGTGCAAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAGGAGCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 72 bp CTGAACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTTaGACGGCAGACGCCGCCGGCCCCTTTCCTGTTACA +
Preference number: 6 (lower is better)
Translates to: LNLQALLHWARS*TADAAGPFPVT
Trigger: TGTAACAGGAAAGGGGCCGGCGGCGTCTGCCGTGCAAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CAA 90 bp GCCTGCTCGGGGAAGGCGCGGTGGATCTTGTGGGCCACTGCCATGTaGGCCAAGAGCATGAACTCCTCCACGAGCCTGCAGAGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: ACSGKARWILWATAM*AKSMNSSTSLQRVG
Trigger: ACCCACCCTCTGCAGGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCCACCGCGCCTTCCCCGAGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CAA 90 bp TGCTCCATGTCCTCAGGCTCCCAGACCAGCGTGAGTTCCGGCTTCTaGCCCACCTTCTGGAAGTGGTGGGACCGCAGGGCCAGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: CSMSSGSQTSVSSGF*PTFWKWWDRRASAW
Trigger: CCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTGGGAGCCTGAGGACATGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp CTCTTCCACCGGAAGGAGCCTTCCAGACCCGGCTCCTaGACCTCCAGGCTCTGCTCCACTGGGCCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: LFHRKEPSRPGS*TSRLCSTGPGL
Trigger: AAGACCTGGCCCAGTGGAGCAGAGCCTGGAGGTTCAGGAGCCGGGTCTGGAAGGCTCCTTCCGGTGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CCA 72 bp CAGACCAGCGTGAGTTCCGGCTTCTTGCCCACCTTCTaGAAGTGGTGGGACCGCAGGGCCAGTGCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: QTSVSSGFLPTF*KWWDRRASAWS
Trigger: ACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCACGCTGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CAA 90 bp CTGGAGCCTGTTGTGATGGGCCAGCCTTGGGCATGTCCTCATGCCTaGGTGACCAGGACCCTCTTCATGGGGAAAGCCGCCCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LEPVVMGQPWACPHA*VTRTLFMGKAAPSG
Trigger: CCCTGAGGGGGCGGCTTTCCCCATGAAGAGGGTCCTGGTCACCAAGGCATGAGGACATGCCCAAGGCTGGCCCATCACAACAGGCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 72 bp GTGAGTTCCGGCTTCTTGCCCACCTTCTGGAAGTGGTaGGACCGCAGGGCCAGTGCCTGGAGTGCAAACACC +
Preference number: 6 (lower is better)
Translates to: VSSGFLPTFWKW*DRRASAWSANT
Trigger: GGTGTTTGCACTCCAGGCACTGGCCCTGCGGTCCCACCACTTCCAGAAGGTGGGCAAGAAGCCGGAACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp CTCCCTGCACCAGTTGGTCTACACCGCCTTCTCCTCTaGCTGGTTAGCTCCTGTGCTGGCTCTCCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: LPAPVGLHRLLL*LVSSCAGSPRG
Trigger: CCCTCTGGGAGAGCCAGCACAGGAGCTAACCAGTCAGAGGAGAAGGCGGTGTAGACCAACTGGTGCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp GGATCTTGTGGGCCACTGCCATGTTGGCCAAGAGCATaGACTCCTCCACGAGCCTGCAGAGGGTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GSCGPLPCWPRA*TPPRACRGWVG
Trigger: TCCCACCCACCCTCTGCAGGCTCGTGGAGGAGTTCATGCTCTTGGCCAACATGGCAGTGGCCCACAAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 72 bp TGTTCCGCCAAGTCCCTGTCTTGCCCAGCACCCCCATaGTCTCCCTGCACCAGTTGGTCTACACCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: CSAKSLSCPAPP*SPCTSWSTPPS
Trigger: AGAAGGCGGTGTAGACCAACTGGTGCAGGGAGACCATGGGGGTGCTGGGCAAGACAGGGACTTGGCGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 72 bp CTGAGCACACCAAGGGGCTTGCAGACTGAGATGCTCTaGAGGGTGGCCTGGCTGGGTCTCCGAGTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: LSTPRGLQTEML*RVAWLGLRVEE
Trigger: TTCCTCAACTCGGAGACCCAGCCAGGCCACCCTCCAGAGCATCTCAGTCTGCAAGCCCCTTGGTGTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS CAA 90 bp CAAGTCCCTGTCTTGCCCAGCACCCCCATGGTCTCCCTGCACCAGTaGGTCTACACCGCCTTCTCCTCTGACTGGTTAGCTCCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: QVPVLPSTPMVSLHQ*VYTAFSSDWLAPVL
Trigger: CAGCACAGGAGCTAACCAGTCAGAGGAGAAGGCGGTGTAGACCAACTGGTGCAGGGAGACCATGGGGGTGCTGGGCAAGACAGGGACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp CCAGAACCCTGCCATCAACTTCCCTTCCTGGAGGTGTaGGTAGTGCTGCGGGTGAGCCTCGTCATCTGGCCA +
Preference number: 6 (lower is better)
Translates to: PEPCHQLPFLEV*VVLRVSLVIWP
Trigger: TGGCCAGATGACGAGGCTCACCCGCAGCACTACTCACACCTCCAGGAAGGGAAGTTGATGGCAGGGTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp GGGTGGCCTGGCTGGGTCTCCGAGTTGAGGAATCTCTaGGGTTGGGTTCTTTGTCTCCTGCTGTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: GWPGWVSELRNL*GWVLCLLLCWL
Trigger: GAGCCAGCACAGCAGGAGACAAAGAACCCAACCTCAGAGATTCCTCAACTCGGAGACCCAGCCAGGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS GCA 72 bp GCCTGTTGTGATGGGCCAGCCTTGGGCATGTCCTCATaGCTTGGTGACCAGGACCCTCTTCATGGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: ACCDGPALGMSS*LGDQDPLHGES
Trigger: GCTTTCCCCATGAAGAGGGTCCTGGTCACCAAGGCATGAGGACATGCCCAAGGCTGGCCCATCACAACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS CCA 72 bp AGGGGCTTGCAGACTGAGATGCTCTGGAGGGTGGCCTaGCTGGGTCTCCGAGTTGAGGAATCTCTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: RGLQTEMLWRVA*LGLRVEESLRL
Trigger: CAACCTCAGAGATTCCTCAACTCGGAGACCCAGCCAGGCCACCCTCCAGAGCATCTCAGTCTGCAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434477.5
CDS CAA 90 bp TCACACATGTGCACAAGAGCTGGAGCCTGTTGTGATGGGCCAGCCTaGGGCATGTCCTCATGCCTTGGTGACCAGGACCCTCTTCATGGG +
Preference number: 6 (lower is better)
Translates to: SHMCTRAGACCDGPA*GMSSCLGDQDPLHG
Trigger: CCCATGAAGAGGGTCCTGGTCACCAAGGCATGAGGACATGCCCAAGGCTGGCCCATCACAACAGGCTCCAGCTCTTGTGCACATGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp GAGAAACCTCCACTGCTTAGCTCAGAGTTCCCGCCTTaGGCAGCTCTGTTGTCATTCGCGTTTCTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: EKPPLLSSEFPP*AALLSFAFLPG
Trigger: TCCGGGGAGAAACGCGAATGACAACAGAGCTGCTCAAGGCGGGAACTCTGAGCTAAGCAGTGGAGGTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000445090.5
CDS TCA 72 bp AAGATCACACATGTGCACAAGAGCTGGAGCCTGTTGTaGTGGGCCAGCCTTGGGCATGTCCTCATGCCTTGG +
Preference number: 6 (lower is better)
Translates to: KITHVHKSWSLL*WASLGHVLMPW
Trigger: CCAAGGCATGAGGACATGCCCAAGGCTGGCCCATCACAACAGGCTCCAGCTCTTGTGCACATGTGTGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429283.2
CDS TCA 72 bp AGCGAGGGCACCAGAAGAGGCTTCAGAGATGGTATCTaGCCTAGTCTCAAACTGCACCAATCCATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SEGTRRGFRDGI*PSLKLHQSMAW
Trigger: CCAGGCCATGGATTGGTGCAGTTTGAGACTAGGTCAGATACCATCTCTGAAGCCTCTTCTGGTGCCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470087.1
CDS GCA 72 bp CACTGCTCATTTATTGGACAACTGCTTGGGGCGAGGTaGAGTGCTGGCACTGGGGATACAGAGATGGACAAC +
Preference number: 6 (lower is better)
Translates to: HCSFIGQLLGAR*SAGTGDTEMDN
Trigger: GTTGTCCATCTCTGTATCCCCAGTGCCAGCACTGCACCTCGCCCCAAGCAGTTGTCCAATAAATGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS CAA 90 bp TCCCCAGGGGCCGGAGGTTCATTCTGTAGTCAGGATGGCTCATTATaGGCTCCAAGGTCACTCTTCTCTCCAGATCCAGAGAAACCTCCA +
Preference number: 6 (lower is better)
Translates to: SPGAGGSFCSQDGSL*APRSLFSPDPEKPP
Trigger: TGGAGGTTTCTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTGACTACAGAATGAACCTCCGGCCCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000441279.5
ENST00000445090.5
CDS GCA 72 bp GCAGATGAACAGTGTGTTGGCATAATCTTTAGGCCGTaGCACAAAGTCCTGGGGACAGTCCTTGAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: ADEQCVGIIFRP*HKVLGTVLERH
Trigger: GTGCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000433430.5
CDS CAA 72 bp GACATCAGGACTGTCATTATAGCTTTTCAGGGACTGTaGCGGGAGATGGTGTCCACAGAGCTCCTCGGGGAT +
Preference number: 6 (lower is better)
Translates to: DIRTVIIAFQGL*REMVSTELLGD
Trigger: ATCCCCGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGCTATAATGACAGTCCTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000445090.5
ENST00000464554.5
ENST00000470087.1
CDS GCA 72 bp AGTATTCCTTCTGTTTCAGGCTCAATTTCACCAGCCTaGCCAAGACTCTTAGCCAGCTGCCCCAGGGCAAAA +
Preference number: 6 (lower is better)
Translates to: SIPSVSGSISPA*PRLLASCPRAK
Trigger: TTTTGCCCTGGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGAGCCTGAAACAGAAGGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000433430.5
CDS CAA 72 bp GCCGGAGGTTCATTCTGTAGTCAGGATGGCTCATTATaGGCTCCAAGGTCACTCTTCTCTCCAGATCCAGAG +
Preference number: 6 (lower is better)
Translates to: AGGSFCSQDGSL*APRSLFSPDPE
Trigger: CTCTGGATCTGGAGAGAAGAGTGACCTTGGAGCCAATAATGAGCCATCCTGACTACAGAATGAACCTCCGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000441279.5
ENST00000445090.5
CDS CAA 72 bp AATGGTTTTAGACTAGAACTAACCTGGGTAAGCCCCTaGCCTGGTGTCTGCGGGCACTCAGAAGATGGTAGC +
Preference number: 6 (lower is better)
Translates to: NGFRLELTWVSP*PGVCGHSEDGS
Trigger: GCTACCATCTTCTGAGTGCCCGCAGACACCAGGCAAGGGGCTTACCCAGGTTAGTTCTAGTCTAAAACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS CAA 90 bp TCCTTCTTGAATGGTTTTAGACTAGAACTAACCTGGGTAAGCCCCTaGCCTGGTGTCTGCGGGCACTCAGAAGATGGTAGCTCCCATCAT +
Preference number: 6 (lower is better)
Translates to: SFLNGFRLELTWVSP*PGVCGHSEDGSSHH
Trigger: ATGATGGGAGCTACCATCTTCTGAGTGCCCGCAGACACCAGGCAAGGGGCTTACCCAGGTTAGTTCTAGTCTAAAACCATTCAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS CAA 72 bp TTTCATTTACTCACTGCTCATTTATTGGACAACTGCTaGGGGCGAGGTGCAGTGCTGGCACTGGGGATACAG +
Preference number: 6 (lower is better)
Translates to: FHLLTAHLLDNC*GRGAVLALGIQ
Trigger: CTGTATCCCCAGTGCCAGCACTGCACCTCGCCCCAAGCAGTTGTCCAATAAATGAGCAGTGAGTAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 72 bp TTCTTTCATTTACTCACTGCTCATTTATTGGACAACTaGTTGGGGCGAGGTGCAGTGCTGGCACTGGGGATA +
Preference number: 6 (lower is better)
Translates to: FFHLLTAHLLDN*LGRGAVLALGI
Trigger: TATCCCCAGTGCCAGCACTGCACCTCGCCCCAAGCAGTTGTCCAATAAATGAGCAGTGAGTAAATGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273009.10
CDS GCA 72 bp GAGGCTTCAGAGATGGTATCTGACCTAGTCTCAAACTaGACCAATCCATGGCCTGGCTCAAACATGTCACTT +
Preference number: 6 (lower is better)
Translates to: EASEMVSDLVSN*TNPWPGSNMSL
Trigger: AAGTGACATGTTTGAGCCAGGCCATGGATTGGTGCAGTTTGAGACTAGGTCAGATACCATCTCTGAAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470087.1
CDS CCA 72 bp ATATCCTTCTTGAATGGTTTTAGACTAGAACTAACCTaGGTAAGCCCCTTGCCTGGTGTCTGCGGGCACTCA +
Preference number: 6 (lower is better)
Translates to: ISFLNGFRLELT*VSPLPGVCGHS
Trigger: TGAGTGCCCGCAGACACCAGGCAAGGGGCTTACCCAGGTTAGTTCTAGTCTAAAACCATTCAAGAAGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS TCA 72 bp AACCAGCACATTTTGTGTGATGCCATGTCCATCTTCTaGGTCGCTGCCATCAAACTGAGCCTCTACAATGAC +
Preference number: 6 (lower is better)
Translates to: NQHILCDAMSIF*VAAIKLSLYND
Trigger: GTCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGGCATCACACAAAATGTGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000445090.5
ENST00000464554.5
ENST00000470087.1
CDS TCA 72 bp CTTGAGAGGCACATAAATTCTAGGCACTCGGTGGTCTaGGGGAGAAAACAGGGCGTATTTCCTAAACAGTTC +
Preference number: 6 (lower is better)
Translates to: LERHINSRHSVV*GRKQGVFPKQF
Trigger: GAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTTATGTGCCTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000433430.5
CDS CAA 90 bp AAGTTTCAAATATGCTCTTTTTCTTCCCTCGTGTGGACCTGTTCTTaGACTTTTTGTCACCTGGCGAAGCACCAATGTCATGTGGACCAG +
Preference number: 6 (lower is better)
Translates to: KFQICSFSSLVWTCS*TFCHLAKHQCHVDQ
Trigger: CTGGTCCACATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTTGAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
CDS CAA 72 bp ATATGCTCTTTTTCTTCCCTCGTGTGGACCTGTTCTTaGACTTTTTGTCACCTGGCGAAGCACCAATGTCAT +
Preference number: 6 (lower is better)
Translates to: ICSFSSLVWTCS*TFCHLAKHQCH
Trigger: ATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
CDS CAA 72 bp ACGAGATCTTCAACAAGTAGCTCAGGTGAAAGCCATTaGGACACGTGGAGAAAATCTGTAGGCAATGACCTT +
Preference number: 6 (lower is better)
Translates to: TRSSTSSSGESH*DTWRKSVGNDL
Trigger: AAGGTCATTGCCTACAGATTTTCTCCACGTGTCCAAATGGCTTTCACCTGAGCTACTTGTTGAAGATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409401.7
ENST00000445090.5
ENST00000470087.1
CDS CAA 72 bp TTGCTGATCTTTGCAGGGATTTCTCCGATAAAGCTCTaGTGTCTTGTGAAATGCAGGTGGTCTCATCTTTTG +
Preference number: 6 (lower is better)
Translates to: LLIFAGISPIKL*CLVKCRWSHLL
Trigger: CAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGCTTTATCGGAGAAATCCCTGCAAAGATCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000445090.5
ENST00000470087.1
CDS TCA 72 bp TACACCCTGGATGAGTGTTCCTCTCTTCAAGCCTTCTaGAACATCCTCCTTGGACATGTAAGTTTCAAATAT +
Preference number: 6 (lower is better)
Translates to: YTLDECSSLQAF*NILLGHVSFKY
Trigger: ATATTTGAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
ENST00000464554.5
CDS CAA 72 bp ATATCTGATTCATACGCAGCTTCTGTTTCTTTGTCATaGCTCTCTGGTTTAACTACCTTCCAATGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ISDSYAASVSLS*LSGLTTFQCSS
Trigger: CGAGGAGCATTGGAAGGTAGTTAAACCAGAGAGCAATGACAAAGAAACAGAAGCTGCGTATGAATCAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000273009.10
ENST00000325385.12
ENST00000390005.9
ENST00000409401.7
ENST00000433430.5
ENST00000441279.5
ENST00000445090.5
ENST00000464554.5
ENST00000470087.1
CDS GCA 72 bp TTAATGCTCTTCATAGCTATCACTGTTCTTCATTGTTaGTCTCGCGGTACTCATAGATATGACATCCTTGAG +
Preference number: 6 (lower is better)
Translates to: LMLFIAITVLHC*SRGTHRYDILE
Trigger: CTCAAGGATGTCATATCTATGAGTACCGCGAGAGCAACAATGAAGAACAGTGATAGCTATGAAGAGCATTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS CCA 72 bp TCAGAAGATGGTAGCTCCCATCATGATTATGGTACATaGATCATAAAGTCTAGATGTCGTGAACAAGAGTAT +
Preference number: 6 (lower is better)
Translates to: SEDGSSHHDYGT*IIKSRCREQEY
Trigger: ATACTCTTGTTCACGACATCTAGACTTTATGATCCATGTACCATAATCATGATGGGAGCTACCATCTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498319.2
CDS CAA 72 bp AGTATAGCCTTGCAATCGAATTCAGCTTCCACAAGTTaGTCTGACATGTTTAATGCTCTTCATAGCTATCAC +
Preference number: 6 (lower is better)
Translates to: SIALQSNSASTS*SDMFNALHSYH
Trigger: GTGATAGCTATGAAGAGCATTAAACATGTCAGACAAACTTGTGGAAGCTGAATTCGATTGCAAGGCTATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498319.2