RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DIRAS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176490

Ensembl transcript IDs: ENST00000323469.5, ENST00000585334.1, ENST00000588128.1

Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCCCGGGTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTaGCTCTCCAGCGGGGCAGTTGTGCTGTGGATGTGGCTGGTCCCG +
Preference number: 1 (lower is better)
Translates to: GSRVGGVREAPPRPW*LSSGAVVLWMWLVP
Trigger: CGGGACCAGCCACATCCACAGCACAACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCACCCGGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 90 bp GGCGGGTCCCGGGTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATaGTGCCTCTCCAGCGGGGCAGTTGTGCTGTGGATGTGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: GGSRVGGVREAPPRP*CLSSGAVVLWMWLV
Trigger: GACCAGCCACATCCACAGCACAACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCACCCGGGACCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTaGTGGAAGAGGCGGGTCCCGGGTGGGCGGTGTCCGGGAAGCCCC +
Preference number: 1 (lower is better)
Translates to: APQVPTRHALLTSLS*WKRRVPGGRCPGSP
Trigger: GGGGCTTCCCGGACACCGCCCACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR TCA 90 bp GGTACAGAACAAAGGGCAGCTTCCAGCCAACAGCCAGCGAGGAACTaGGGCCTTCAGTCTTGCAACAGCAAGGAACTGAATGCTGCAACA +
Preference number: 1 (lower is better)
Translates to: GTEQRAASSQQPARN*GLQSCNSKELNAAT
Trigger: TGTTGCAGCATTCAGTTCCTTGCTGTTGCAAGACTGAAGGCCTCAGTTCCTCGCTGGCTGTTGGCTGGAAGCTGCCCTTTGTTCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 90 bp CACATGTGTGCAATCTCTCTCTCTCTCTCACTGCACAAAAGGGCGTaGGCACACACACACGTTGCTTCCTCACACCCAATAAGACCAAAA +
Preference number: 1 (lower is better)
Translates to: HMCAISLSLSLHKRA*AHTHVASSHPIRPK
Trigger: TTTTGGTCTTATTGGGTGTGAGGAAGCAACGTGTGTGTGTGCGCACGCCCTTTTGTGCAGTGAGAGAGAGAGAGAGATTGCACACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR TCA 90 bp AGGACCCAGCCAACCTGCACCCAGGCTCTTGACCCACAGAATCTATaGGATAATAAGCATGTGTTGTTTCTGGTTGCTACATTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: RTQPTCTQALDPQNL*DNKHVLFLVATFVV
Trigger: GACCACAAATGTAGCAACCAGAAACAACACATGCTTATTATCTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAGGTTGGCTGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 90 bp TACCCACCTCTCTGTATACCCTACACCACTATTACACACACAGACTaGCACAAAAACATATCATCCCAGACAGACACACACAGGTATACA +
Preference number: 1 (lower is better)
Translates to: YPPLCIPYTTITHTD*HKNISSQTDTHRYT
Trigger: TGTATACCTGTGTGTGTCTGTCTGGGATGATATGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 90 bp ACTGATACAGATTTGGAACCGAAAGTCACATTGCTAGAGTCATGTTaGTATAGAGTGGAACACAGATCGTGTCCCTCAATCAGGACAAAC +
Preference number: 1 (lower is better)
Translates to: TDTDLEPKVTLLESC*YRVEHRSCPSIRTN
Trigger: GTTTGTCCTGATTGAGGGACACGATCTGTGTTCCACTCTATAGCAACATGACTCTAGCAATGTGACTTTCGGTTCCAAATCTGTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCACAGGACGCGCAGGTCTaGCTGGGGACACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAQDAQV*LGTPQG
Trigger: TCCCTGGGGTGTCCCCAGCCAGACCTGCGCGTCCTG...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CAA 90 bp AGCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTaGGTGGAAGAGGCGGGTCCCGGGTGGGCGGTGTCCGGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: STPGPHPPCVANVSV*VEEAGPGWAVSGKP
Trigger: GGGCTTCCCGGACACCGCCCACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCATGGCAGGGGCACTGCTaGAGGCCCTGTGGTTATTGC +
Preference number: 2 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAWQGHC*RPCGYC
Trigger: GCAATAACCACAGGGCCTGCAGCAGTGCCCCTGCCA...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCGGAGAGAGGTGCGTCTaGAACCGGAGGAGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPGERCV*NRRSGH
Trigger: GTGCCCACTCCTCCGGTTCCAGACGCACCTCTCTCC...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCACTGCTGCAGGCCCTGTaGTTATTGCCTGGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: VGGVREAPPRPWCLSSGALLQAL*LLPGGL
Trigger: CAGGCCACCAGGCAATAACCACAGGGCCTGCAGCAG...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCCCCAGAAGGTCACAGTaGTCAAATGTGAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPPRRSQ*SNVRDR
Trigger: CCTGTCCCTCACATTTGATCACTGTGACCTTCTGGG...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGTGCTGTGGATGTGGCTaGTCCCGGGGGTGGGATTCG +
Preference number: 2 (lower is better)
Translates to: APQVPTRHALLTSLSWWKCCGCG*SRGWDS
Trigger: CGAATCCCACCCCCGGGACCAGCCACATCCACAGCA...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGCCCCTCCACGCCCATaGTGCCTCTCCAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVAPPRP*CLSSGA
Trigger: TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGC...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGGGTGGGATTCGGGGCTaGCAGGGGCACTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGGGIRG*QGHCCR
Trigger: CCTGCAGCAGTGCCCCTGCCAGCCCCGAATCCCACC...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCGGTCCCCACCCGCCATaGGTTGCTAACGTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPGPHPP*VANVSV
Trigger: GACAGAGACGTTAGCAACGCATGGCGGGTGGGGACC...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGTCCTGTTTTCCCATCTaGAGGACAAGGGGGCCACCT +
Preference number: 2 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRSCFPI*RTRGPP
Trigger: AGGTGGCCCCCTTGTCCTGCAGATGGGAAAACAGGA...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp AGCTCTGCTCAGACACAATGCCAGCTCTTCTGGGAGCCCGGTCCACGTGCTGGAGACAGAGGAGAGAGGTaGGTCTGGAACCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SSAQTQCQLFWEPGPRAGDRGER*VWNRRS
Trigger: ACTCCTCCGGTTCCAGACGCACCTCTCTCCTCTGTC...TCCAGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTGTGTCTGAGCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCGAACCCAGAAGCTACTaGCAGGACAGGAGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPEPRSY*QDRRGG
Trigger: GCCTCCTCTCCTGTCCTGGCAGTAGCTTCTGGGTTC...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGACGCGCAGGTCTGGCTaGGGACACCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVTRRSG*GHPRER
Trigger: TCTTTCCCTGGGGTGTCCCCAGCCAGACCTGCGCGT...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGCCACGGGGGTGTAATTaGTGTATCTCTGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGPRGCN*CISGRG
Trigger: GCCCCGGCCAGAGATACATCAATTACACCCCCGTGG...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGACGTCTCTGTCTTGGTaGAAGAGGCGGGTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVTSLSW*KRRVPG
Trigger: ACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGT...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCTTGGACACAACCCTGTaGGGTCACACGAGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPLDTTL*GHTSVV
Trigger: CACCACACTCGTGTGACCCCACAGGGTTGTGTCCAA...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGCTGGAACCGGAGGAGTaGGCACAGATCAGAGGTCAC +
Preference number: 2 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVLEPEE*AQIRGH
Trigger: GTGACCTCTGATCTGTGCCCACTCCTCCGGTTCCAG...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGGCCACCTCCGGCTCTTaGTTTTGGAGGGTACAGACA +
Preference number: 2 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGATSGS*FWRVQT
Trigger: TGTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGC...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACATATTGCCTGGTGGCCTaGGGCCCATCCCACGGGCCC +
Preference number: 2 (lower is better)
Translates to: TDTSHISSLADNHTQVSTYCLVA*GPSHGP
Trigger: GGGCCCGTGGGATGGGCCTCAGGCCACCAGGCAATA...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACCCCAGGGAAAGAGATaGAAACGGGGAAACGCAGCC +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKPQGKR*KRGNAA
Trigger: GGCTGCGTTTCCCCGTTTCCATCTCTTTCCCTGGGG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAATCACGACGGGCCGGGTaGGCTTGGGTGTATGTTAAC +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKSRRAG*AWVYVN
Trigger: GTTAACATACACCCAAGCCCACCCGGCCCGTCGTGA...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACACAGTGATCAAATGTaGGGGACAGGACGCGCAGGT +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKHSDQM*GTGRAG
Trigger: ACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACGGCGCCCTCGGATCCTaGTGGTGCTGGCTCCCATCG +
Preference number: 2 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYGALGS*WCWLPS
Trigger: CGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCC...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAAAAACGCAGCCTCCTCTaGTCCTGGTGGGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKKRSLL*SWWEQA
Trigger: TGCTTGTTCCCACCAGGACCAGAGGAGGCTGCGTTT...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACGGGCCGGGTGGGCTTaGGTGTATGTTAACACCAAA +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKRAGWA*VYVNTK
Trigger: TTTGGTGTTAACATACACCCAAGCCCACCCGGCCCG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGACCTGTGGTTATTGCCTaGTGGCCTGAGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: APQVAQIHHSIATSVYVGPVVIA*WPEAHP
Trigger: GGGATGGGCCTCAGGCCACCAGGCAATAACCACAGG...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAAGGGGTCACACGAGTGTaGTGTCACTCAGACTCTCTC +
Preference number: 2 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKGVTRV*CHSDSL
Trigger: GAGAGAGTCTGAGTGACACCACACTCGTGTGACCCC...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGCTACATAGTCCCACCTaGCCACATGACTACAGAGAC +
Preference number: 2 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGLHSPT*PHDYRD
Trigger: GTCTCTGTAGTCATGTGGCCAGGTGGGACTATGTAG...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACACCTCCACGCCCATGGTaGCTCTCCAGCGGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTPPRPW*LSSGAV
Trigger: AACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGG...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAGACAGAACAGGAGGGTaGAGAGAGAGCAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: APQVAQIHHSIATSVYVGDRTGG*RESRGG
Trigger: TCCTCCCCTGCTCTCTCTCCACCCTCCTGTTCTGTC...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCGACCCACAGAATCTATaGGATAATAAGCATGTGTTG +
Preference number: 2 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPDPQNL*DNKHVL
Trigger: CAACACATGCTTATTATCTCATAGATTCTGTGGGTC...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR TCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGGCTGCAACAACCACATaGGCTTCTAAGAAGCAAATC +
Preference number: 2 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGAATTT*ASKKQI
Trigger: GATTTGCTTCTTAGAAGCTCATGTGGTTGTTGCAGC...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACCTCGGATCCTGCTGGTaGTGGCTCCCATCGGCTGTC +
Preference number: 2 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYLGSCW*WLPSAV
Trigger: GACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAG...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCTTGCTAGAGTCATGTTaGTATAGAGTGGAACACAGA +
Preference number: 2 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPLLESC*YRVEHR
Trigger: TCTGTGTTCCACTCTATAGCAACATGACTCTAGCAA...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACAGTGGTTATTGCCTGGTaGCCTGAGGCCCATCCCACG +
Preference number: 2 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTVVIAW*PEAHPT
Trigger: CGTGGGATGGGCCTCAGGCCACCAGGCAATAACCAC...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACACTAACGTCTCTGTCTTaGTGGAAGAGGCGGGTCCCG +
Preference number: 2 (lower is better)
Translates to: TDTSHISSLADNHTQVSTLTSLS*WKRRVP
Trigger: CGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAG...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CAA 90 bp CCTGAGATCCCAAGTAGAGGACCCAGCCAACCTGCACCCAGGCTCTaGACCCACAGAATCTATGAGATAATAAGCATGTGTTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: PEIPSRGPSQPAPRL*THRIYEIISMCCFW
Trigger: CCAGAAACAACACATGCTTATTATCTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAGGTTGGCTGGGTCCTCTACTTGGGATCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACCCGCGCACCCCAGGTTaGACAAATACACCATTCCAT +
Preference number: 2 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYPRTPG*TNTPFH
Trigger: ATGGAATGGTGTATTTGTGCAACCTGGGGTGCGCGG...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACTCCGGCTCTTGGTTTTaGAGGGTACAGACAGAACAG +
Preference number: 2 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYSGSWF*RVQTEQ
Trigger: CTGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGA...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACACACCCAGAACCTCATaGCTGCAGGTACACTCGACT +
Preference number: 2 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYTPRTS*LQVHST
Trigger: AGTCGAGTGTACCTGCAGCCATGAGGTTCTGGGTGT...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACCGCACACACACACGTTaGTTCCTCACACCCAATAAG +
Preference number: 2 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYRTHTR*FLTPNK
Trigger: CTTATTGGGTGTGAGGAAGCAACGTGTGTGTGTGCG...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACTGTGTTGTTTCTGGTTaGTACATTTGTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYCVVSG*YICGHL
Trigger: CAAATGACCACAAATGTAGCAACCAGAAACAACACA...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp CGGGTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATaGTGCCTCTCCAGCGGGGCAGTTGTGCTGTGGATG +
Preference number: 3 (lower is better)
Translates to: RVGGVREAPPRP*CLSSGAVVLWM
Trigger: CATCCACAGCACAACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 72 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTaGCTCTCCAGCGGGGCAGTTGTGCTGTGGATGTGG +
Preference number: 3 (lower is better)
Translates to: VGGVREAPPRPW*LSSGAVVLWMW
Trigger: CCACATCCACAGCACAACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCGCTAACGTCTCTGTCTaGGTGGAAGAGGCGGGTCCC +
Preference number: 3 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPANVSV*VEEAGP
Trigger: GGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGC...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp GTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTaGTGGAAGAGGCGGGTCCCGGGTGGGCGGTGTCCG +
Preference number: 3 (lower is better)
Translates to: VPTRHALLTSLS*WKRRVPGGRCP
Trigger: CGGACACCGCCCACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGCTCTGCTCAGACACAATGCCAGCTCTTCTGGGAGCCCGGTCCACGTGCTGGACAGGCCCTGTGGTTATaGCCTGGTGGCCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: SSAQTQCQLFWEPGPRAGQALWL*PGGLRP
Trigger: GGGCCTCAGGCCACCAGGCAATAACCACAGGGCCTG...TCCAGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTGTGTCTGAGCAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGGGCCACCTCCGGCTCTaGGTTTTGGAGGGTACAGAC +
Preference number: 3 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRGHLRL*VLEGTD
Trigger: GTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGCC...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp TGCCATGCTCCGAGCCCCGCTGTGGAGAGACCCACATaGTACAGAACAAAGGGCAGCTTCCAGCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: CHAPSPAVERPT*YRTKGSFQPTA
Trigger: GGCTGTTGGCTGGAAGCTGCCCTTTGTTCTGTACCATGTGGGTCTCTCCACAGCGGGGCTCGGAGCATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp TCCCATCTGCAGGACAAGGGGGCCACCTCCGGCTCTTaGTTTTGGAGGGTACAGACAGAACAGGAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: SHLQDKGATSGS*FWRVQTEQEGG
Trigger: TCCACCCTCCTGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGCCCCCTTGTCCTGCAGATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp GGGAAAGAGATGGAAACGGGGAAACGCAGCCTCCTCTaGTCCTGGTGGGAACAAGCAGCTCCTCTTGCCAGC +
Preference number: 3 (lower is better)
Translates to: GKEMETGKRSLL*SWWEQAAPLAS
Trigger: GCTGGCAAGAGGAGCTGCTTGTTCCCACCAGGACCAGAGGAGGCTGCGTTTCCCCGTTTCCATCTCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAAGGAGGGTGTCGGTGTaGGGGGAGGCAGCGGGGGTC +
Preference number: 3 (lower is better)
Translates to: APQVAQIHHSIATSVYVGRRVSV*GEAAGV
Trigger: GACCCCCGCTGCCTCCCCCAACACCGACACCCTCCT...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTCTCCGGCTCTTGGTTTaGGAGGGTACAGACAGAACA +
Preference number: 3 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCLRLLV*EGTDRT
Trigger: TGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGAG...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCAACAAGCAGCTCCTCTaGCCAGCTCCCCATCCTGTT +
Preference number: 3 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPNKQLL*PAPHPV
Trigger: AACAGGATGGGGAGCTGGCAAGAGGAGCTGCTTGTT...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 72 bp TCACTCTCTCCGGCACCTTCAGAACCCAGAAGCTACTaGCAGGACAGGAGAGGAGGCAACATCAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: SLSPAPSEPRSY*QDRRGGNISCW
Trigger: CCAGCAGCTGATGTTGCCTCCTCTCCTGTCCTGGCAGTAGCTTCTGGGTTCTGAAGGTGCCGGAGAGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCCACACATATCCAGTCTaGCTGACAACCACACACAGG +
Preference number: 3 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPHTYPV*LTTTHR
Trigger: CCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTG...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGCCTGCACCCAGGCTCTaGACCCACAGAATCTATGAG +
Preference number: 3 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVPAPRL*THRIYE
Trigger: CTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAGG...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR TCA 72 bp AGGCCTTCAGATGAGACCTCTGCCTGGCGAATGCTTTaGTTGCAGCCTCCTGAGATCCCAAGTAGAGGACCC +
Preference number: 3 (lower is better)
Translates to: RPSDETSAWRML*LQPPEIPSRGP
Trigger: GGGTCCTCTACTTGGGATCTCAGGAGGCTGCAATCAAAGCATTCGCCAGGCAGAGGTCTCATCTGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACCACTTCCGTGTATGTaGGACACAACCCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKPLPCM*DTTLWG
Trigger: ACCCCACAGGGTTGTGTCCAACATACACGGAAGTGG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR TCA 72 bp CAAAGGGCAGCTTCCAGCCAACAGCCAGCGAGGAACTaGGGCCTTCAGTCTTGCAACAGCAAGGAACTGAAT +
Preference number: 3 (lower is better)
Translates to: QRAASSQQPARN*GLQSCNSKELN
Trigger: ATTCAGTTCCTTGCTGTTGCAAGACTGAAGGCCTCAGTTCCTCGCTGGCTGTTGGCTGGAAGCTGCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 72 bp CGATCAGGCCTTCAGATGAGACCTCTGCCTGGCGAATaGTTTGATTGCAGCCTCCTGAGATCCCAAGTAGAG +
Preference number: 3 (lower is better)
Translates to: RSGLQMRPLPGE*FDCSLLRSQVE
Trigger: CTCTACTTGGGATCTCAGGAGGCTGCAATCAAAGCATTCGCCAGGCAGAGGTCTCATCTGAAGGCCTGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACATCTCCAGCGGGGCAGTaGTGCTGTGGATGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: TDTSHISSLADNHTQVSTSPAGQ*CCGCGW
Trigger: CCAGCCACATCCACAGCACAACTGCCCCGCTGGAGA...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCCTGACTGATACAGATTaGGAACCGAAAGTCACATTG +
Preference number: 3 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPLTDTD*EPKVTL
Trigger: CAATGTGACTTTCGGTTCCAAATCTGTATCAGTCAG...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 72 bp GCAATCTCTCTCTCTCTCTCACTGCACAAAAGGGCGTaGGCACACACACACGTTGCTTCCTCACACCCAATA +
Preference number: 3 (lower is better)
Translates to: AISLSLSLHKRA*AHTHVASSHPI
Trigger: TATTGGGTGTGAGGAAGCAACGTGTGTGTGTGCGCACGCCCTTTTGTGCAGTGAGAGAGAGAGAGAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR-3UTR CAA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGTTCTGGTTGCTACATTaGTGGTCATTTGTTACACAG +
Preference number: 3 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGFWLLH*WSFVTQ
Trigger: CTGTGTAACAAATGACCACAAATGTAGCAACCAGAA...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CCA 72 bp ACAAATACACCATTCCATAGCCACTTCCGTGTATGTTaGACACAACCCTGTGGGGTCACACGAGTGTGGTGT +
Preference number: 3 (lower is better)
Translates to: TNTPFHSHFRVC*TQPCGVTRVWC
Trigger: ACACCACACTCGTGTGACCCCACAGGGTTGTGTCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR TCA 72 bp GATTCACACAGACACCTCACACATATCCAGTCTTGCTaGCAACCACACACAGGTATCTACAACTACCCACCT +
Preference number: 3 (lower is better)
Translates to: DSHRHLTHIQSC*QPHTGIYNYPP
Trigger: AGGTGGGTAGTTGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGTGTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR GCA 72 bp GATTTGGAACCGAAAGTCACATTGCTAGAGTCATGTTaGTATAGAGTGGAACACAGATCGTGTCCCTCAATC +
Preference number: 3 (lower is better)
Translates to: DLEPKVTLLESC*YRVEHRSCPSI
Trigger: GATTGAGGGACACGATCTGTGTTCCACTCTATAGCAACATGACTCTAGCAATGTGACTTTCGGTTCCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCAGGCAACATCAGCTGCTaGTGGGCCCTGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAGNISC*WALGQP
Trigger: GGGCTGGCCCAGGGCCCACCAGCAGCTGATGTTGCC...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCATGCCGGTGGTGTCTGTaGTCTGCAGCGTGCACACGC +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGACRWCL*SAACTR
Trigger: GCGTGTGCACGCTGCAGATCACAGACACCACCGGCA...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCAGGAGAGAGGTGCGTCTaGAACCGGAGGAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAGERCV*NRRSGH
Trigger: GTGCCCACTCCTCCGGTTCCAGACGCACCTCTCTCC...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCACCTGTGGTTATTGCCTaGTGGCCTGAGGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAPVVIA*WPEAHP
Trigger: GGGATGGGCCTCAGGCCACCAGGCAATAACCACAGG...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CAA 72 bp GGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTaGGTGGAAGAGGCGGGTCCCGGGTGGGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPHPPCVANVSV*VEEAGPGWAVS
Trigger: GGACACCGCCCACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCAGGTGTCCTCGATGGTaGGGATGTAGGTGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPRCPRW*GCRCRG
Trigger: TCCGCGACACCTACATCCCCACCATCGAGGACACCT...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGGCGCACTTCCACTCCTaGGCCACCGCCTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: APQVPTRHALLTSLSWWKAHFHS*ATACAS
Trigger: CGAGGCGCAGGCGGTGGCCCAGGAGTGGAAGTGCGC...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCAAGCGTCAGCAGCTCCTaGAAGAGCTCCTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGASVSSS*KSSLTL
Trigger: CAACGTCAAGGAGCTCTTCCAGGAGCTGCTGACGCT...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGGGCCGGGAGGGCTGGTaGCAGCTGCAAGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRGREGW*QLQEPQ
Trigger: CTGGGGTTCTTGCAGCTGGCACCAGCCCTCCCGGCC...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCGCCCCAAGGAGATTGTaGTATCAGGGTGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPAPRRL*YQGVSL
Trigger: CAGGGACACACCCTGATAGCACAATCTCCTTGGGGC...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCAAACGCAGCCTCCTCTaGTCCTGGTGGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPKRSLL*SWWEQA
Trigger: TGCTTGTTCCCACCAGGACCAGAGGAGGCTGCGTTT...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCTTGGACACAACCCTGTaGGGTCACACGAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPLDTTL*GHTSVV
Trigger: CACCACACTCGTGTGACCCCACAGGGTTGTGTCCAA...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTGGAGGCAACATCAGCTaGTGGTGGGCCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCGGNIS*WWALGQ
Trigger: CTGGCCCAGGGCCCACCAGCAGCTGATGTTGCCTCC...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCCAGGACGCGCAGGTCTaGCTGGGGACACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPQDAQV*LGTPQG
Trigger: TCCCTGGGGTGTCCCCAGCCAGACCTGCGCGTCCTG...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGGCCCTCGGATCCTGCTaGTGCTGGCTCCCATCGGCT +
Preference number: 4 (lower is better)
Translates to: APQVPTRHALLTSLSWWKALGSC*CWLPSA
Trigger: AGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGC...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTCGGTCTGTCCTCTTCTaGTTCCCGGAGCGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCRSVLF*FPERLP
Trigger: CGGCAAGCGCTCCGGGAAGCAGAAGAGGACAGACCG...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGCTCTGCTCAGACACAATGCCAGCTCTTCTGGGAGCCCGGTCCACGTGCTGGACCTCCACGCCCATGGTaGCTCTCCAGCGGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSAQTQCQLFWEPGPRAGPPRPW*LSSGAV
Trigger: AACTGCCCCGCTGGAGAGGCACCATGGGCGTGGAGG...TCCAGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTGTGTCTGAGCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGTGGCAGGGGCACTGCTaGAGGCCCTGTGGTTATTGC +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRWQGHC*RPCGYC
Trigger: GCAATAACCACAGGGCCTGCAGCAGTGCCCCTGCCA...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCCCAGCGGGGCAGTTGTaGTGTGGATGTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVPAGQL*CGCGWS
Trigger: GGACCAGCCACATCCACAGCACAACTGCCCCGCTGG...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGCTGCTGCAGGCCCTGTaGTTATTGCCTGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRLLQAL*LLPGGL
Trigger: CAGGCCACCAGGCAATAACCACAGGGCCTGCAGCAG...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTACGTCTCTGTCTTGGTaGAAGAGGCGGGTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCTSLSW*KRRVPG
Trigger: ACCCGGGACCCGCCTCTTCCACCAAGACAGAGACGT...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGCAGGCCCTGCTCTCTaGGGCACAGGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVAGPAL*GTGGGE
Trigger: CTCCCCACCACCTGTGCCCCAGAGAGCAGGGCCTGC...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCACATGTTGCTATAGAGTaGAACACAGATCGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VGGVREAPPRPWCLSSGAHVAIE*NTDRVP
Trigger: AGGGACACGATCTGTGTTCCACTCTATAGCAACATG...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGGCCCGGTCCACGTGCTaGATAGCAACACACACGCAC +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRARSTC*IATHTH
Trigger: GTGCGTGTGTGTTGCTATCCAGCACGTGGACCGGGC...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGTGGCCGAGGTCTCCATaGAAGCGCACTTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: APQVPTRHALLTSLSWWKWPRSP*KRTSTP
Trigger: AGGAGTGGAAGTGCGCTTTCATGGAGACCTCGGCCA...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGGAACCCAGAAGCTACTaGCAGGACAGGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRREPRSY*QDRRGG
Trigger: GCCTCCTCTCCTGTCCTGGCAGTAGCTTCTGGGTTC...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACGGGGCCGGGAGGGCTaGTGCCAGCTGCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKRGREG*CQLQEP
Trigger: GGGTTCTTGCAGCTGGCACCAGCCCTCCCGGCCCCG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGCTAACGTCTCTGTCTTaGTGGAAGAGGCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: APQVPTRHALLTSLSWWKLTSLS*WKRRVP
Trigger: CGGGACCCGCCTCTTCCACCAAGACAGAGACGTTAG...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAACCCACGATGGGGGAGTaGGGGCACCCACATGCGGGG +
Preference number: 4 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKPTMGE*GHPHAG
Trigger: CCCCGCATGTGGGTGCCCCCACTCCCCCATCGTGGG...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGCACAGTGATCAAATGTaGGGGACAGGACGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRHSDQM*GTGRAG
Trigger: ACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTG...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAGCACCAGCGAGCTCTTaGCCACGCCGCCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: APQVAQIHHSIATSVYVGAPASS*PRRPPR
Trigger: TCGGGGCGGGCGGCGTGGGCAAGAGCTCGCTGGTGC...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGCTCGGATCCTGCTGGTaGTGGCTCCCATCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVLGSCW*WLPSAV
Trigger: GACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAG...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCGACAGAACAGGAGGGTaGAGAGAGAGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVDRTGG*RESRGG
Trigger: TCCTCCCCTGCTCTCTCTCCACCCTCCTGTTCTGTC...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGCGGGCCGGGTGGGCTTaGGTGTATGTTAACACCAAA +
Preference number: 4 (lower is better)
Translates to: APQVPTRHALLTSLSWWKRAGWA*VYVNTK
Trigger: TTTGGTGTTAACATACACCCAAGCCCACCCGGCCCG...CTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCCTGGAACCGGAGGAGTaGGCACAGATCAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVLEPEE*AQIRGH
Trigger: GTGACCTCTGATCTGTGCCCACTCCTCCGGTTCCAG...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGTGCTGTGGATGTGGCTaGTCCCGGGGGTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVCCGCG*SRGWDS
Trigger: CGAATCCCACCCCCGGGACCAGCCACATCCACAGCA...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGCGGAGAACACCAGGATaGAGGCGTGGCCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGRRTPG*RRGPWR
Trigger: TCTCCAAGGGCCACGCCTTCATCCTGGTGTTCTCCG...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTTCCCACCTGGCCACATaGCTACAGAGACACATGTGT +
Preference number: 4 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCSHLAT*LQRHMC
Trigger: ACACATGTGTCTCTGTAGTCATGTGGCCAGGTGGGA...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGAGGTGTCGCGGAACGTaGCCTTCACGAAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGRCRGT*PSRSAA
Trigger: TGCTGCGCTTCGTGAAGGGCACGTTCCGCGACACCT...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCTTGCTAGAGTCATGTTaGTATAGAGTGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPLLESC*YRVEHR
Trigger: TCTGTGTTCCACTCTATAGCAACATGACTCTAGCAA...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGCTCTGCTCAGACACAATGCCAGCTCTTCTGGGAGCCCGGTCCACGTGCTGGACCTCTGCCTGGCGAATaGTTTGATTGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSAQTQCQLFWEPGPRAGPLPGE*FDCSLL
Trigger: CAGGAGGCTGCAATCAAAGCATTCGCCAGGCAGAGG...TCCAGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTGTGTCTGAGCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAAGGATCCTGCTGGTGCTaGCTCCCATCGGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKGSCWC*LPSAVP
Trigger: GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCC...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGACACCCAGAACCTCATaGCTGCAGGTACACTCGACT +
Preference number: 4 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRTPRTS*LQVHST
Trigger: AGTCGAGTGTACCTGCAGCCATGAGGTTCTGGGTGT...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGATATTGCCTGGTGGCCTaGGGCCCATCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: APQVAQIHHSIATSVYVGYCLVA*GPSHGP
Trigger: GGGCCCGTGGGATGGGCCTCAGGCCACCAGGCAATA...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp AGCTCTGCTCAGACACAATGCCAGCTCTTCTGGGAGCCCGGTCCACGTGCTGGACTGCACCCAGGCTCTTaGCCCACAGAATCTATGAGA +
Preference number: 4 (lower is better)
Translates to: SSAQTQCQLFWEPGPRAGLHPGS*PTESMR
Trigger: TCTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAG...TCCAGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTGTGTCTGAGCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGGTGTCCACCTCCCGCTaGGTCTCATCGCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGVSTSR*VSSHLL
Trigger: CAACAAGTGCGATGAGACGCAGCGGGAGGTGGACAC...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGCCCCAGGGAAAGAGATaGAAACGGGGAAACGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVPQGKR*KRGNAA
Trigger: GGCTGCGTTTCCCCGTTTCCATCTCTTTCCCTGGGG...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGTCACGACGGGCCGGGTaGGCTTGGGTGTATGTTAAC +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVSRRAG*AWVYVN
Trigger: GTTAACATACACCCAAGCCCACCCGGCCCGTCGTGA...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCCACTTCCGTGTATGTTaGACACAACCCTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPHFRVC*TQPCGV
Trigger: GACCCCACAGGGTTGTGTCCAACATACACGGAAGTG...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACGCAGATGCACTTAGATACAAGTCACCCATCCGCGCACCCCAGGTTGCACAAAGGCCAGCCCAAGTTTTaGGGGGACCCAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TQMHLDTSHPSAHPRLHKGQPKF*GDPALL
Trigger: GAGCAGAGCTGGGTCCCCCCAAAACTTGGGCTGGCC...TTTGTGCAACCTGGGGTGCGCGGATGGGTGACTTGTATCTAAGTGCATCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACATCCTGGGCCACCGCCTaGGCCTCGCGCGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTSWATA*ASRVST
Trigger: GGTGGACACGCGCGAGGCGCAGGCGGTGGCCCAGGA...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGCTCTCTCTCTCTCACTaGACAAAAGGGCGTGCGCAC +
Preference number: 4 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVLSLSH*TKGRAH
Trigger: GTGCGCACGCCCTTTTGTGCAGTGAGAGAGAGAGAG...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACACCCCAGACCGAGCCTaGGCCCGCTGGTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYTPDRA*ARWSLR
Trigger: CCGCAGGGACCAGCGGGCCCAGGCTCGGTCTGGGGT...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCCTACATAGTCCCACCTaGCCACATGACTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPLHSPT*PHDYRD
Trigger: GTCTCTGTAGTCATGTGGCCAGGTGGGACTATGTAG...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAAGGGCTGGTGCCAGCTaGAAGAACCCCAGACCGAGC +
Preference number: 4 (lower is better)
Translates to: APQVAQIHHSIATSVYVGRAGAS*KNPRPS
Trigger: GCTCGGTCTGGGGTTCTTGCAGCTGGCACCAGCCCT...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp GGCCACCTCCGGCTCTTGGTTTTGGAGGGTACAGACAGAACAGGAGGGTGGAGACGCACACACACACGTTaGTTCCTCACACCCAATAAG +
Preference number: 4 (lower is better)
Translates to: GHLRLLVLEGTDRTGGWRRTHTR*FLTPNK
Trigger: CTTATTGGGTGTGAGGAAGCAACGTGTGTGTGTGCG...TCTCCACCCTCCTGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGTCCGGCTCTTGGTTTTaGAGGGTACAGACAGAACAG +
Preference number: 4 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGSGSWF*RVQTEQ
Trigger: CTGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGA...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAGTGGTTATTGCCTGGTaGCCTGAGGCCCATCCCACG +
Preference number: 4 (lower is better)
Translates to: APQVAQIHHSIATSVYVGVVIAW*PEAHPT
Trigger: CGTGGGATGGGCCTCAGGCCACCAGGCAATAACCAC...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGACAATGCCAGCTCTTCTaGGAGCCCGGTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: APQVAQIHHSIATSVYVGQCQLF*EPGPRA
Trigger: AGCACGTGGACCGGGCTCCCAGAAGAGCTGGCATTG...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CAA 72 bp CAGCCAACAGCCAGCGAGGAACTGAGGCCTTCAGTCTaGCAACAGCAAGGAACTGAATGCTGCAACAACCAC +
Preference number: 4 (lower is better)
Translates to: QPTASEELRPSV*QQQGTECCNNH
Trigger: GTGGTTGTTGCAGCATTCAGTTCCTTGCTGTTGCAAGACTGAAGGCCTCAGTTCCTCGCTGGCTGTTGGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCTTACACAGCAGTAGCTaGCTGATACAGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPLHSSS*LIQIWN
Trigger: GTTCCAAATCTGTATCAGTCAGCTACTGCTGTGTAA...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACAGGGGCAGTTGTGCTGTaGATGTGGCTGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTGAVVL*MWLVPG
Trigger: CCCCGGGACCAGCCACATCCACAGCACAACTGCCCC...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACAGCTTGCCGTCGATGTTaGGGCTCATGTTCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTACRRC*GSCSGA
Trigger: CGCGCCGGAACATGAGCCTCAACATCGACGGCAAGC...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACACCACGGGGGTGTAATTaGTGTATCTCTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTPRGCN*CISGRG
Trigger: GCCCCGGCCAGAGATACATCAATTACACCCCCGTGG...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCGACCCACAGAATCTATaGGATAATAAGCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVDPQNL*DNKHVL
Trigger: CAACACATGCTTATTATCTCATAGATTCTGTGGGTC...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGGAGCCCGGTCCACGTaGTGGATAGCAACACACACG +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTGARST*WIATHT
Trigger: CGTGTGTGTTGCTATCCAGCACGTGGACCGGGCTCC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACACGCGCAGGTCTGGCTaGGGACACCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYTRRSG*GHPRER
Trigger: TCTTTCCCTGGGGTGTCCCCAGCCAGACCTGCGCGT...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACGCCCCTCCACGCCCATaGTGCCTCTCCAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYAPPRP*CLSSGA
Trigger: TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGC...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGACAGAGGAGAGAGGTaGGTCTGGAACCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTDRGER*VWNRRS
Trigger: ACTCCTCCGGTTCCAGACGCACCTCTCTCCTCTGTC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACAGGACCCAGCCAACCTaGACCCAGGCTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYRTQPT*TQALDP
Trigger: TGGGTCAAGAGCCTGGGTGCAGGTTGGCTGGGTCCT...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGGTAGGTGTCCTCGATaGTGGGGATGTAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTGRCPR*WGCRCR
Trigger: GCGACACCTACATCCCCACCATCGAGGACACCTACC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACGGTGGGATTCGGGGCTaGCAGGGGCACTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYGGIRG*QGHCCR
Trigger: CCTGCAGCAGTGCCCCTGCCAGCCCCGAATCCCACC...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACGGGTGCATTTGCCCTTaGCGCGGTCTGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYGCICP*RGLSSS
Trigger: AGAAGAGGACAGACCGCGTCAAGGGCAAATGCACCC...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGGGGTCACACGAGTGTaGTGTCACTCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTGVTRV*CHSDSL
Trigger: GAGAGAGTCTGAGTGACACCACACTCGTGTGACCCC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
3UTR CAA 72 bp CCAAGTAGAGGACCCAGCCAACCTGCACCCAGGCTCTaGACCCACAGAATCTATGAGATAATAAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: PSRGPSQPAPRL*THRIYEIISMC
Trigger: ACACATGCTTATTATCTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAGGTTGGCTGGGTCCTCTACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACAGTGGTGTCTGTGATCTaGAGCGTGCACACGCTCTTG +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTVVSVI*SVHTLL
Trigger: CAAGAGCGTGTGCACGCTGCAGATCACAGACACCAC...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACACCGCGCACCCCAGGTTaGACAAATACACCATTCCAT +
Preference number: 4 (lower is better)
Translates to: TDTSHISSLADNHTQVSTPRTPG*TNTPFH
Trigger: ATGGAATGGTGTATTTGTGCAACCTGGGGTGCGCGG...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACAACACACACGCACGTGTaGACACTCCCTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTTHTHV*TLPLSE
Trigger: CTCAGAGAGAGGGAGTGTGCACACGTGCGTGTGTGT...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACGCCACCTCCGGCTCTTaGTTTTGGAGGGTACAGACA +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYATSGS*FWRVQT
Trigger: TGTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGC...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACGGTCCCCACCCGCCATaGGTTGCTAACGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYGPHPP*VANVSV
Trigger: GACAGAGACGTTAGCAACGCATGGCGGGTGGGGACC...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACACCTGGAAGAGCTCCTTaGCGTTGTAGTTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTPGRAP*RCSSSW
Trigger: CCAAGATGAACTACAACGTCAAGGAGCTCTTCCAGG...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACAGCTCCTCCAGCGACTaGTTGCTGGTGACGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYSSSSD*LLVTEN
Trigger: GTTCTCCGTCACCAGCAAGCAGTCGCTGGAGGAGCT...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp CACCTCTCTGTATACCCTACACCACTATTACACACACAGACTGCCACAAAAACACATATCCAGTCTTGCTaGCAACCACACACAGGTATC +
Preference number: 4 (lower is better)
Translates to: HLSVYPTPLLHTQTATKTHIQSC*QPHTGI
Trigger: GATACCTGTGTGTGGTTGTCAGCAAGACTGGATATG...TGTTTTTGTGGCAGTCTGTGTGTGTAATAGTGGTGTAGGGTATACAGAGAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACTCTCATCGCACTTGTTaGCCACGAGCATCACGGGGA +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYSHRTC*PRASRG
Trigger: TCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGA...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACTCCTGTTTTCCCATCTaGAGGACAAGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYSCFPI*RTRGPP
Trigger: AGGTGGCCCCCTTGTCCTGCAGATGGGAAAACAGGA...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR TCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACCCAATAAACATTTGTTaGGTAAACACTCACACGAAC +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYPINIC*VNTHTN
Trigger: GTTCGTGTGAGTGTTTACTCAACAAATGTTTATTGG...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR GCA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACTGTGTTGTTTCTGGTTaGTACATTTGTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYCVVSG*YICGHL
Trigger: CAAATGACCACAAATGTAGCAACCAGAAACAACACA...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CCA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACTGGTTGCTACATTTGTaGTCATTTGTTACACAGCAG +
Preference number: 4 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYWLLHL*SFVTQQ
Trigger: CTGCTGTGTAACAAATGACCACAAATGTAGCAACCA...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCATGCTTCCCGGAGCGCTaGCCGTCGATGTTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VGGVREAPPRPWCLSSGACFPER*PSMLRL
Trigger: GAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCA...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS GCA 90 bp CACTCCTGGGCCACCGCCTGCGCCTCGCGCGTGTCCACCTCCCGCTaGGTCTCATCGCACTTGTTGCCCACGAGCATCACGGGGATGTCC +
Preference number: 5 (lower is better)
Translates to: HSWATACASRVSTSR*VSSHLLPTSITGMS
Trigger: GGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCGCGAGGCGCAGGCGGTGGCCCAGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS-3UTR CAA 90 bp TCTGTCCGGGGCGCCCTCGGATCCTGCTGGTGCTGGCTCCCATCGGCTGTCCCCAGGGCCCCAAGGAGATaGTGCTATCAGGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SVRGALGSCWCWLPSAVPRAPRR*CYQGVS
Trigger: GGACACACCCTGATAGCACAATCTCCTTGGGGCCCT...GGGGACAGCCGATGGGAGCCAGCACCAGCAGGATCCGAGGGCGCCCCGGACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGTCCTCCAGCGACTGCTaGCTGGTGACGGAGAACACC +
Preference number: 5 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRSSSDC*LVTENT
Trigger: GGTGTTCTCCGTCACCAGCAAGCAGTCGCTGGAGGA...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCCGCTTGCCGTCGATGTaGAGGCTCATGTTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVRLPSM*RLMFRR
Trigger: GCGCCGGAACATGAGCCTCAACATCGACGGCAAGCG...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGTCCTCCACGCTGCCCTaGATCTGCACGATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRSSTLP*ICTMSL
Trigger: CAAGCTCATCGTGCAGATCAAGGGCAGCGTGGAGGA...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTAGGGTGCATTTGCCCTaGACGCGGTCTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCRVHLP*TRSVLF
Trigger: GAAGAGGACAGACCGCGTCAAGGGCAAATGCACCCT...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GGCCACCTCCGGCTCTTGGTTTTGGAGGGTACAGACAGAACAGGAGGGTGGAGATCTCCAGCGGGGCAGTaGTGCTGTGGATGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GHLRLLVLEGTDRTGGWRSPAGQ*CCGCGW
Trigger: CCAGCCACATCCACAGCACAACTGCCCCGCTGGAGA...TCTCCACCCTCCTGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GTGGGCGGTGTCCGGGAAGCCCCTCCACGCCCATGGTGCCTCTCCAGCGGGGCACTGACTGATACAGATTaGGAACCGAAAGTCACATTG +
Preference number: 5 (lower is better)
Translates to: VGGVREAPPRPWCLSSGALTDTD*EPKVTL
Trigger: CAATGTGACTTTCGGTTCCAAATCTGTATCAGTCAG...TGCCCCGCTGGAGAGGCACCATGGGCGTGGAGGGGCTTCCCGGACACCGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS GCA 90 bp GCTCACATGAGGGTGCATTTGCCCTTGACGCGGTCTGTCCTCTTCTaGTTCCCGGAGCGCTTGCCGTCGATGTTGAGGCTCATGTTCCGG +
Preference number: 5 (lower is better)
Translates to: AHMRVHLPLTRSVLF*FPERLPSMLRLMFR
Trigger: CCGGAACATGAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGACAGACCGCGTCAAGGGCAAATGCACCCTCATGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS-3UTR CAA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTTCCGCGCACCCCAGGTaGCACAAATACACCATTCCA +
Preference number: 5 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCSAHPR*HKYTIP
Trigger: TGGAATGGTGTATTTGTGCAACCTGGGGTGCGCGGA...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAGTGGGCACAGATCAGAGGTCACGACGGGCCGGGTGGGCTTGGGTGTATGTCCTGCACCCAGGCTCTaGACCCACAGAATCTATGAG +
Preference number: 5 (lower is better)
Translates to: RSGHRSEVTTGRVGLGVCPAPRL*THRIYE
Trigger: CTCATAGATTCTGTGGGTCAAGAGCCTGGGTGCAGG...ACATACACCCAAGCCCACCCGGCCCGTCGTGACCTCTGATCTGTGCCCACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GCAGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGTCGGGTCCCCTCCTATaGCAGATGCCCTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AGRLCLERRLHRPHDGGVSGPLL*QMPSLP
Trigger: GGGGAGAGAGGGCATCTGCAATAGGAGGGGACCCGA...CACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CCCCTCCCCCAGAAGGTCACAGTGATCAAATGTGAGGGACAGGACGCGCAGGTCAACAAGCAGCTCCTCTaGCCAGCTCCCCATCCTGTT +
Preference number: 5 (lower is better)
Translates to: PLPQKVTVIKCEGQDAQVNKQLL*PAPHPV
Trigger: AACAGGATGGGGAGCTGGCAAGAGGAGCTGCTTGTT...GACCTGCGCGTCCTGTCCCTCACATTTGATCACTGTGACCTTCTGGGGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGCCCACCCGCCATGCGTaGCTAACGTCTCTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGPTRHA*LTSLSW
Trigger: CCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGG...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGAGGCCACCTCCGGCTCTaGGTTTTGGAGGGTACAGAC +
Preference number: 5 (lower is better)
Translates to: APQVAQIHHSIATSVYVGGHLRL*VLEGTD
Trigger: GTCTGTACCCTCCAAAACCAAGAGCCGGAGGTGGCC...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACACAGGCCCTGTGGTTATaGCCTGGTGGCCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TDTSHISSLADNHTQVSTQALWL*PGGLRP
Trigger: GGGCCTCAGGCCACCAGGCAATAACCACAGGGCCTG...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAAGACTATGTCTAGAGCGAAGGCTACACAGACCCCACGATGGGGGAGTGGGCACACATATCCAGTCTaGCTGACAACCACACACAGG +
Preference number: 5 (lower is better)
Translates to: RKTMSRAKATQTPRWGSGHTYPV*LTTTHR
Trigger: CCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTG...CCCACTCCCCCATCGTGGGGTCTGTGTAGCCTTCGCTCTAGACATAGTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGACACATGAGGGTGCATTaGCCCTTGACGCGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: APQVAQIHHSIATSVYVGHMRVH*PLTRSV
Trigger: GACAGACCGCGTCAAGGGCAAATGCACCCTCATGTG...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCGAACCGAAAGTCACATaGCTAGAGTCATGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPEPKVT*LESCCY
Trigger: ATAGCAACATGACTCTAGCAATGTGACTTTCGGTTC...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CAGGTCCCCACCCGCCATGCGTTGCTAACGTCTCTGTCTTGGTGGAAGAGGCGGTTCTGGTTGCTACATTaGTGGTCATTTGTTACACAG +
Preference number: 5 (lower is better)
Translates to: QVPTRHALLTSLSWWKRRFWLLH*WSFVTQ
Trigger: CTGTGTAACAAATGACCACAAATGTAGCAACCAGAA...CCGCCTCTTCCACCAAGACAGAGACGTTAGCAACGCATGGCGGGTGGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGTCTCATCGCACTTGTaGCCCACGAGCATCACGGGG +
Preference number: 5 (lower is better)
Translates to: TDTSHISSLADNHTQVSTVSSHL*PTSITG
Trigger: CCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGAC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp CATTTGTTGAGTAAACACTCACACGAACACAGAGGAAAACAAACATGCTTGTACAGGAGGGTGTCGGTGTaGGGGGAGGCAGCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: HLLSKHSHEHRGKQTCLYRRVSV*GEAAGV
Trigger: GACCCCCGCTGCCTCCCCCAACACCGACACCCTCCT...GTACAAGCATGTTTGTTTTCCTCTGTGTTCGTGTGAGTGTTTACTCAACAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACAGACACCTCACACATATCCAGTCTTGCTGACAACCACACACAGGTATCTACAGCTAACGTCTCTGTCTaGGTGGAAGAGGCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TDTSHISSLADNHTQVSTANVSV*VEEAGP
Trigger: GGGACCCGCCTCTTCCACCAAGACAGAGACGTTAGC...TGTAGATACCTGTGTGTGGTTGTCAGCAAGACTGGATATGTGTGAGGTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp GCACCCCAGGTTGCACAAATACACCATTCCATAGCCACTTCCGTGTATGTTGGACCACTTCCGTGTATGTaGGACACAACCCTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: APQVAQIHHSIATSVYVGPLPCM*DTTLWG
Trigger: ACCCCACAGGGTTGTGTCCAACATACACGGAAGTGG...TCCAACATACACGGAAGTGGCTATGGAATGGTGTATTTGTGCAACCTGGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp AGGAGATTGTGCTATCAGGGTGTGTCCCTGAGAAAGGGCCGCAGACCCCTGCCCGTGTCCAATAAACATTaGTTGAGTAAACACTCACAC +
Preference number: 5 (lower is better)
Translates to: RRLCYQGVSLRKGRRPLPVSNKH*LSKHSH
Trigger: GTGTGAGTGTTTACTCAACAAATGTTTATTGGACAC...GGGCAGGGGTCTGCGGCCCTTTCTCAGGGACACACCCTGATAGCACAATCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACTGCGTCTCATCGCACTaGTTGCCCACGAGCATCACG +
Preference number: 5 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYCVSSH*LPTSIT
Trigger: CGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCA...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACCTCCGGCTCTTGGTTTaGGAGGGTACAGACAGAACA +
Preference number: 5 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYLRLLV*EGTDRT
Trigger: TGTTCTGTCTGTACCCTCCAAAACCAAGAGCCGGAG...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS-3UTR CAA 90 bp ACACACAGGTATCTACAACTACCCACCTCTCTGTATACCCTACACCACTATTACCTGAGGCCTTCAGTCTaGCAACAGCAAGGAACTGAA +
Preference number: 5 (lower is better)
Translates to: THRYLQLPTSLYTLHHYYLRPSV*QQQGTE
Trigger: TTCAGTTCCTTGCTGTTGCAAGACTGAAGGCCTCAG...GTAATAGTGGTGTAGGGTATACAGAGAGGTGGGTAGTTGTAGATACCTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323469.5
CDS GCA 72 bp GCCACCGCCTGCGCCTCGCGCGTGTCCACCTCCCGCTaGGTCTCATCGCACTTGTTGCCCACGAGCATCACG +
Preference number: 6 (lower is better)
Translates to: ATACASRVSTSR*VSSHLLPTSIT
Trigger: CGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCGCGAGGCGCAGGCGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS CAA 90 bp GCCTGCGCCTCGCGCGTGTCCACCTCCCGCTGCGTCTCATCGCACTaGTTGCCCACGAGCATCACGGGGATGTCCTCCACGCTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: ACASRVSTSRCVSSH*LPTSITGMSSTLPL
Trigger: CAAGGGCAGCGTGGAGGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCGCGAGGCGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS CAA 90 bp TGGGCGGCGGGCAGGCGGGCGTTCCGGGCTCACATGAGGGTGCATTaGCCCTTGACGCGGTCTGTCCTCTTCTGCTTCCCGGAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: WAAGRRAFRAHMRVH*PLTRSVLFCFPERL
Trigger: CAAGCGCTCCGGGAAGCAGAAGAGGACAGACCGCGTCAAGGGCAAATGCACCCTCATGTGAGCCCGGAACGCCCGCCTGCCCGCCGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS GCA 72 bp TCCATGAAAGCGCACTTCCACTCCTGGGCCACCGCCTaGGCCTCGCGCGTGTCCACCTCCCGCTGCGTCTCA +
Preference number: 6 (lower is better)
Translates to: SMKAHFHSWATA*ASRVSTSRCVS
Trigger: TGAGACGCAGCGGGAGGTGGACACGCGCGAGGCGCAGGCGGTGGCCCAGGAGTGGAAGTGCGCTTTCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS CAA 90 bp TGCGCCTCGCGCGTGTCCACCTCCCGCTGCGTCTCATCGCACTTGTaGCCCACGAGCATCACGGGGATGTCCTCCACGCTGCCCTTGATC +
Preference number: 6 (lower is better)
Translates to: CASRVSTSRCVSSHL*PTSITGMSSTLPLI
Trigger: GATCAAGGGCAGCGTGGAGGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCGCGAGGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323469.5
ENST00000585334.1
ENST00000588128.1
CDS GCA 72 bp GCGTGTCCACCTCCCGCTGCGTCTCATCGCACTTGTTaGCCACGAGCATCACGGGGATGTCCTCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: ACPPPAASHRTC*PRASRGCPPRC
Trigger: GCAGCGTGGAGGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323469.5
ENST00000585334.1
ENST00000588128.1
CDS CAA 72 bp CGCGTGTCCACCTCCCGCTGCGTCTCATCGCACTTGTaGCCCACGAGCATCACGGGGATGTCCTCCACGCTG +
Preference number: 6 (lower is better)
Translates to: RVSTSRCVSSHL*PTSITGMSSTL
Trigger: CAGCGTGGAGGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323469.5
ENST00000585334.1
ENST00000588128.1
CDS CAA 72 bp TCGCGCGTGTCCACCTCCCGCTGCGTCTCATCGCACTaGTTGCCCACGAGCATCACGGGGATGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: SRVSTSRCVSSH*LPTSITGMSST
Trigger: CGTGGAGGACATCCCCGTGATGCTCGTGGGCAACAAGTGCGATGAGACGCAGCGGGAGGTGGACACGCGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323469.5
ENST00000585334.1
ENST00000588128.1
CDS CAA 72 bp GGCAGGCGGGCGTTCCGGGCTCACATGAGGGTGCATTaGCCCTTGACGCGGTCTGTCCTCTTCTGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: GRRAFRAHMRVH*PLTRSVLFCFP
Trigger: CGGGAAGCAGAAGAGGACAGACCGCGTCAAGGGCAAATGCACCCTCATGTGAGCCCGGAACGCCCGCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS CAA 72 bp GTCCTCTTCTGCTTCCCGGAGCGCTTGCCGTCGATGTaGAGGCTCATGTTCCGGCGCGTCTCCAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: VLFCFPERLPSM*RLMFRRVSSVS
Trigger: GCTGACGCTGGAGACGCGCCGGAACATGAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS CAA 90 bp CATTTGCCCTTGACGCGGTCTGTCCTCTTCTGCTTCCCGGAGCGCTaGCCGTCGATGTTGAGGCTCATGTTCCGGCGCGTCTCCAGCGTC +
Preference number: 6 (lower is better)
Translates to: HLPLTRSVLFCFPER*PSMLRLMFRRVSSV
Trigger: GACGCTGGAGACGCGCCGGAACATGAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGACAGACCGCGTCAAGGGCAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS TCA 72 bp TCCTCTTCTGCTTCCCGGAGCGCTTGCCGTCGATGTTaGGGCTCATGTTCCGGCGCGTCTCCAGCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SSSASRSACRRC*GSCSGASPASA
Trigger: TGCTGACGCTGGAGACGCGCCGGAACATGAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS GCA 72 bp TGTCCTCGATGGTGGGGATGTAGGTGTCGCGGAACGTaGCCTTCACGAAGCGCAGCACCAGCGAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: CPRWWGCRCRGT*PSRSAAPASSC
Trigger: GCAAGAGCTCGCTGGTGCTGCGCTTCGTGAAGGGCACGTTCCGCGACACCTACATCCCCACCATCGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323469.5
ENST00000585334.1
ENST00000588128.1
CDS CAA 72 bp TTGACGCGGTCTGTCCTCTTCTGCTTCCCGGAGCGCTaGCCGTCGATGTTGAGGCTCATGTTCCGGCGCGTC +
Preference number: 6 (lower is better)
Translates to: LTRSVLFCFPER*PSMLRLMFRRV
Trigger: GACGCGCCGGAACATGAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGACAGACCGCGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1
CDS GCA 72 bp AGGGTGCATTTGCCCTTGACGCGGTCTGTCCTCTTCTaGTTCCCGGAGCGCTTGCCGTCGATGTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: RVHLPLTRSVLF*FPERLPSMLRL
Trigger: GAGCCTCAACATCGACGGCAAGCGCTCCGGGAAGCAGAAGAGGACAGACCGCGTCAAGGGCAAATGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323469.5
ENST00000585334.1