RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DICER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100697

Ensembl transcript IDs: ENST00000343455.8, ENST00000393063.6, ENST00000526495.6, ENST00000527414.5, ENST00000527554.2, ENST00000529206.1, ENST00000529720.1, ENST00000531162.6, ENST00000532939.3, ENST00000541352.5, ENST00000556045.6, ENST00000674628.1, ENST00000675540.1, ENST00000675995.1

Found 822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGGTAGTCGTACTTTACAGCCAGCGATGCAAAGATGGTGTTGTTaGCCAGGGCAGACCGCAGGTCTGTCAGGACCCCCGGGGAGTGCT +
Preference number: 1 (lower is better)
Translates to: CGSRTLQPAMQRWCC*PGQTAGLSGPPGSA
Trigger: AGCACTCCCCGGGGGTCCTGACAGACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGCATCGCTGGCTGTAAAGTACGACTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 90 bp CTGGCCACAGAAGCAGCAGCACAGCTCACTGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGA +
Preference number: 1 (lower is better)
Translates to: LATEAAAQLTERFFC*LLKFSRVGHRAFSR
Trigger: TCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTCAGTGAGCTGTGCTGCTGCTTCTGTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp CCAATAGAAGGGCTCTGCTCAGAATCCATCCTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTT +
Preference number: 1 (lower is better)
Translates to: PIEGLCSESILPLST*IVSVVPGITAITGL
Trigger: AAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACACTATTCAAGTGCTCAAGGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 90 bp GACAGCTTTGAAGTACTTGTGGTAGTCGTACTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGACCAGGGCAGACCGCAGGTCTGTCAG +
Preference number: 1 (lower is better)
Translates to: DSFEVLVVVVLYSQR*KDGVVDQGRPQVCQ
Trigger: CTGACAGACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGCATCGCTGGCTGTAAAGTACGACTACCACAAGTACTTCAAAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp GGCGGCCCTCATGCGCATCAGGGTAAGTGCAAAATAGATATGTGGTaGTGGCATGCTTTAAAAAGGAGTCGCCAAGCATTTCAAGCCGCT +
Preference number: 1 (lower is better)
Translates to: GGPHAHQGKCKIDMW*WHALKRSRQAFQAA
Trigger: AGCGGCTTGAAATGCTTGGCGACTCCTTTTTAAAGCATGCCATCACCACATATCTATTTTGCACTTACCCTGATGCGCATGAGGGCCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp GCCAAGCATTTCAAGCCGCTCCAGGTTAAATCCATCACTAGCGTTTaGCAGAGTCAAAGCCTGAAGAATAAGTCCAGGATTGGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: AKHFKPLQVKSITSV*QSQSLKNKSRIGAK
Trigger: CTTGGCCCCAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTCAAACGCTAGTGATGGATTTAACCTGGAGCGGCTTGAAATGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 90 bp AGCTGGTTAAATAGCAGCCCAGCAGGGCTTCCACACAGTCCGCTATaGTTTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAA +
Preference number: 1 (lower is better)
Translates to: SWLNSSPAGLPHSPL*FCQQYTAQCASRKK
Trigger: TTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGGAAGCCCTGCTGGGCTGCTATTTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 90 bp GATTGTGACTCGTGGACCACCATCGTCAGGCCTCAACACATATGGTaGGAAAACGTCATCATCATCCATGACAGGATCAATGTCAGTCTC +
Preference number: 1 (lower is better)
Translates to: DCDSWTTIVRPQHIW*ENVIIIHDRINVSL
Trigger: GAGACTGACATTGATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp ACAGTATCTATTGATGTGTCCAATGGCCGTGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCTCAACACATATGGTGGGAAAACGTC +
Preference number: 1 (lower is better)
Translates to: TVSIDVSNGRVDCDS*TTIVRPQHIWWENV
Trigger: GACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACACATCAATAGATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp TGCTTTTGGGTAGCACTGCCTTCGTTTCGTGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: CFWVALPSFRGTWSS*NTGLFFIMQIKLLF
Trigger: GAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGTGCTACCCAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 90 bp CGTCAGGCCTCAACACATATGGTGGGAAAACGTCATCATCATCCATaGCAGGATCAATGTCAGTCTCACCAGTATCAACCGACTTGGAAC +
Preference number: 1 (lower is better)
Translates to: RQASTHMVGKRHHHP*QDQCQSHQYQPTWN
Trigger: GTTCCAAGTCGGTTGATACTGGTGAGACTGACATTGATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp GTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAACACATATaGTGGGAAAACGTCATCATCATCCATGACAGGATCAATGTCAGT +
Preference number: 1 (lower is better)
Translates to: VDCDSWTTIVRPQHI*WENVIIIHDRINVS
Trigger: ACTGACATTGATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp TCAAACACTCTGGAATTGCTTTTGGGTAGCACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAACACTGGTCTCTTCTTCATCATGCA +
Preference number: 1 (lower is better)
Translates to: SNTLELLLGSTAFVS*NLVFLEHWSLLHHA
Trigger: TGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 90 bp GTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCACCACAAAGTCATCTTCTTCAACAGC +
Preference number: 1 (lower is better)
Translates to: VRNGLLSRVNTTVFF*WIPEPHHKVIFFNS
Trigger: GCTGTTGAAGAAGATGACTTTGTGGTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 90 bp GTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCCCCTTCTGATTCAAATGTCGAGGTG +
Preference number: 1 (lower is better)
Translates to: VYSADFPIWLSSSQH*LKEALSPSDSNVEV
Trigger: CACCTCGACATTTGAATCAGAAGGGGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 90 bp AATGGTCATCCAGTTCGCCAATTTTGTGCAGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAGCCAATCGTACACAGCTCATTGGTG +
Preference number: 1 (lower is better)
Translates to: NGHPVRQFCAVSHSK*ELQLFQPIVHSSLV
Trigger: CACCAATGAGCTGTGTACGATTGGCTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAACTGCACAAAATTGGCGAACTGGATGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 90 bp AAGGCGATAAAGTATGCTGGGGAGACAAACAGCTTTTCTCCACAGTaGTGCTGGAATTGGATGTATAGCACAGAGTTCTGGAACCAGTAT +
Preference number: 1 (lower is better)
Translates to: KAIKYAGETNSFSPQ*CWNWMYSTEFWNQY
Trigger: ATACTGGTTCCAGAACTCTGTGCTATACATCCAATTCCAGCATCACTGTGGAGAAAAGCTGTTTGTCTCCCCAGCATACTTTATCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp TGCTTTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGGAT +
Preference number: 1 (lower is better)
Translates to: CFCQQYTAQCASRKK*TAFPCQHHSFLLMD
Trigger: ATCCATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 90 bp TCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTGAACTaGCCACAGAAGCAGCAGCACAGCTCACTGAAAGGTTCTTTTGTT +
Preference number: 1 (lower is better)
Translates to: SNNHIPSLSIQKSVN*PQKQQHSSLKGSFV
Trigger: AACAAAAGAACCTTTCAGTGAGCTGTGCTGCTGCTTCTGTGGCCAGTTCACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp GAGATTTTGATTGTAAGAAAGACCATTAATTGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTTACCAGGGGACTCGCTGAGCAACGT +
Preference number: 1 (lower is better)
Translates to: EILIVRKTINCCKIC*NFNVELTRGLAEQR
Trigger: ACGTTGCTCAGCGAGTCCCCTGGTAAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCAATTAATGGTCTTTCTTACAATCAAAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp CTCCTAAGCTCAGAATCCATTCCTTGCATTTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCAATGACATGGAAGAGCTCAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LLSSESIPCISFFSS*NCTKSSMTWKSSGE
Trigger: CTCTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGAAATGCAAGGAATGGATTCTGAGCTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp AATGTACCATCAGGCAACTCTCGGGTTCTGCATTTAGGAGCTAGATaGGTAAACGGATCACTTGGTAATCTAGCACAGTATCTATTGATG +
Preference number: 1 (lower is better)
Translates to: NVPSGNSRVLHLGAR*VNGSLGNLAQYLLM
Trigger: CATCAATAGATACTGTGCTAGATTACCAAGTGATCCGTTTACTCATCTAGCTCCTAAATGCAGAACCCGAGAGTTGCCTGATGGTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp CATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGTAACTGTATAAATTCTGAATGGAAT +
Preference number: 1 (lower is better)
Translates to: HFHQGIYYSGEYIHR*AGAGSRNCINSEWN
Trigger: ATTCCATTCAGAATTTATACAGTTACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 90 bp ATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTTTCCCAACTaGCATCAAATGGTCATCCAGTTCGCCAATTTTGTGCAGTTTCTC +
Preference number: 1 (lower is better)
Translates to: MQIKLLFIFNSLFPN*HQMVIQFANFVQFL
Trigger: GAGAAACTGCACAAAATTGGCGAACTGGATGACCATTTGATGCCAGTTGGGAAAGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 90 bp GTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTaGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGA +
Preference number: 1 (lower is better)
Translates to: VIQCFICIWMIKHTS*WNLQTTIFRVFQYR
Trigger: TCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 90 bp AGTGCAGGTTTTTCAAGCCGAAGAATATGTGAGAATATATACTGGTaGAGTCTTGTAATCAACTCAAGCATTTGTAGAGACAACATGAAA +
Preference number: 1 (lower is better)
Translates to: SAGFSSRRICENIYW*SLVINSSICRDNMK
Trigger: TTTCATGTTGTCTCTACAAATGCTTGAGTTGATTACAAGACTTCACCAGTATATATTCTCACATATTCTTCGGCTTGAAAAACCTGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHRGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCTCCCTTACTATCAGGTaGAACAGCGACCGGGAACAT +
Preference number: 2 (lower is better)
Translates to: RSPPHQALLLLILLLVILSLTIR*NSDREH
Trigger: ATGTTCCCGGTCGCTGTTGCACCTGATAGTAAGGGA...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCCAGGAGAGACAGCTTTaGAGTACTTGTGGTAGTCGT +
Preference number: 2 (lower is better)
Translates to: RSPPHQALLLLILLLVILQERQL*STCGSR
Trigger: ACGACTACCACAAGTACTTCAAAGCTGTCTCTCCTG...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCGCACAAAGTCATCAATaGCATGGAAGAGCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: RSPPHQALLLLILLLVILAQSHQ*HGRAQE
Trigger: CTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGC...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATTACACAGCTCATTGGTaGACCAACAATGGAGGCTCG +
Preference number: 2 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYYTAHW*TNNGGS
Trigger: CGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTA...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTGTGGAATCTGAGGTATaGGTTTGGCCGTCAGTATTC +
Preference number: 2 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPVESEV*VWPSVF
Trigger: GAATACTGACGGCCAAACCCATACCTCAGATTCCAC...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTAGTCTTGAAGATGTGTaGTCCACATCCAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSSLEDV*STSSSG
Trigger: GCCACTGCTGGATGTGGACCACACATCTTCAAGACT...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR GCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: RSPPHQALLLLILLLVILIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCCTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 2 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATTCCATCACTAGCGTTTaGCAGAGTCAAAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHSITSV*QSQSLK
Trigger: CTTCAGGCTTTGACTCTGTCAAACGCTAGTGATGGA...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 2 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 90 bp CCCAATAGAAGGGCTCTGCTCAGAATCCATCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACT +
Preference number: 2 (lower is better)
Translates to: PNRRALLRIHPALEH*NSVCRTRHYGHHRT
Trigger: AGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACACTATTCAAGTGCTCAAGGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTAACCCCGATATAAGGTaGTTCAGTGTTTTATCTGCA +
Preference number: 2 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPNPDIR*FSVLSA
Trigger: TGCAGATAAAACACTGAATCACCTTATATCGGGGTT...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: RSPPHQALLLLILLLVILSFFSS*NCTKSS
Trigger: TGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGA...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTCCAATAGAAGGGCTCTaGTCAGAATCCATCCTGCCC +
Preference number: 2 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLPIEGL*SESILP
Trigger: GGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 90 bp ACAGAAGCAGCAGCACAGCTCACTGAAAGGTTCTTTTGTTGGCTGTaGAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTC +
Preference number: 2 (lower is better)
Translates to: TEAAAQLTERFFCWL*KFSRVGHRAFSRSV
Trigger: GACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTCAGTGAGCTGTGCTGCTGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTCCAGACTGTCTCCAGTaGCATCCCACTATCCATGTA +
Preference number: 2 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLPDCLQ*HPTIHV
Trigger: TACATGGATAGTGGGATGTCACTGGAGACAGTCTGG...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGGAACAGAGGAAAAGCTaGGCAGCCCTCTCCCCACAG +
Preference number: 2 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVEQRKS*AALSPQ
Trigger: CTGTGGGGAGAGGGCTGCTCAGCTTTTCCTCTGTTC...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTATATTGACACCACCATaGGGCTGGGTAGTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLILTPP*GWVVPS
Trigger: AGAAGGGACTACCCAGCCGCATGGTGGTGTCAATAT...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCAGTCTCTTTCCCAACTaGCATCAAATGGTCATCCAG +
Preference number: 2 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPSLFPN*HQMVIQ
Trigger: CTGGATGACCATTTGATGCCAGTTGGGAAAGAGACT...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTCGTTTCGTGGAACCTaGTCTTCCTGGAACACTGGT +
Preference number: 2 (lower is better)
Translates to: VSVVPGITAITGLPSEVDSFRGT*SSWNTG
Trigger: ACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGA...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAGGGGCCAAGAGTCCTTaGGGAGTACCCAATAGAAGG +
Preference number: 2 (lower is better)
Translates to: GITAITGLPSEVDLLAFPGAKSP*GVPNRR
Trigger: CCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCC...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCAAAGGTGCTTGGTTATaGGGTAGTCCAAAATCGCAT +
Preference number: 2 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPKGAWL*GSPKSH
Trigger: ATGCGATTTTGGACTACCTCATAACCAAGCACCTTT...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCAACTACTGCAGGACTaGCACTACTGCACACACGGA +
Preference number: 2 (lower is better)
Translates to: EILPSRAQGLFPISPFNYQLLQD*HYCTHG
Trigger: TCCGTGTGTGCAGTAGTGCCAGTCCTGCAGTAGTTG...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGCAACTACTGCAGGACTaGCACTACTGCACACACGGA +
Preference number: 2 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWQLLQD*HYCTHG
Trigger: TCCGTGTGTGCAGTAGTGCCAGTCCTGCAGTAGTTG...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 2 (lower is better)
Translates to: TAITGLPSEVDLLAFPSREYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGA +
Preference number: 2 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHERFFC*LLKFSR
Trigger: TCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTC...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATAGGGCTGATCAGGTCTaGGATAACTATCCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: VSVVPGITAITGLPSEVDRADQV*DNYPSN
Trigger: GTTTGAGGGATAGTTATCCCAGACCTGATCAGCCCT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGTACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGYQGTR*ATFCSS
Trigger: TGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTA...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: VSVVPGITAITGLPSEVDYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTCACTATCCATGTAAATaGCACCAGCAAGCGACTCAA +
Preference number: 2 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLHYPCK*HQQATQ
Trigger: TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTG...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 2 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYEYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRVDCDS*TTIVRP
Trigger: AGGCCTGACGATGGTGGTCCACGAGTCACAATCAAC...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCACAGACATTTGGTCATaGTTTTCTAGAGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESTDIWS*FSREEV
Trigger: AACCTCCTCTCTAGAAAATCATGACCAAATGTCTGT...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp ACCAGTATCTGTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCAAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TSICLFCRLSHLAFLFSARGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGCCAGCAGTGGCTGGTTaGGATTGGTTAGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMPAVAG*DWLGQG
Trigger: ACCTTGACCTAACCAATCTCAACCAGCCACTGCTGG...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGAGCGCTTTCCCCTTCTaGTTCAAATGTCGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRSAFPF*FKCRGV
Trigger: GACACCTCGACATTTGAATCAGAAGGGGAAAGCGCT...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR GCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 2 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTAGTGGCCGCATCATaGGATAGTACACCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILLVAAS*DSTPAR
Trigger: TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAA...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR CAA 90 bp CTTGGTAATCTAGCACAGTATCTATTGATGTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAACACATAT +
Preference number: 2 (lower is better)
Translates to: LGNLAQYLLMCPMAV*IVTRGPPSSGLNTY
Trigger: ATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACACATCAATAGATACTGTGCTAGATTACCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CAA 90 bp CAGAGTTCTGGAACCAGTATCTGTTTATTCTGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCACTGCTTAAAGGAAGCGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: QSSGTSICLFCRLSH*AFLFSALLKGSAFP
Trigger: GGGGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGTTCCAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCCAGACTGTCTCCAGTaGCATCCCACTATCCATGTA +
Preference number: 2 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSPDCLQ*HPTIHV
Trigger: TACATGGATAGTGGGATGTCACTGGAGACAGTCTGG...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 2 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACTATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 2 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 2 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: EILPSRAQGLFPISPFNYIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGTAFVS*NLVFLE
Trigger: TTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGT...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGCTCTGGAATTGCTTTTaGGTAGCACTGCCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWLWNCF*VALPSF
Trigger: AAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAG...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCGTTCTATTAGCACCTTaGTGTGCAGCATTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILVLLAP*CAAFSG
Trigger: CCCTGAAAATGCTGCACATCAAGGTGCTAATAGAAC...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGATTCTGAATGGAATATaGGGTAGTTGGTTGCACGGG +
Preference number: 2 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRILNGI*GSWLHG
Trigger: CCCGTGCAACCAACTACCTCATATTCCATTCAGAAT...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACTATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 2 (lower is better)
Translates to: EILPSRAQGLFPISPFNYYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCC +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSSSSQH*LKEALS
Trigger: GGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGA...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGTCAGTGGGAACTACCTaGCAGGAGGACTTTAGTAAA +
Preference number: 2 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVSVGTT*QEDFSK
Trigger: TTTACTAAAGTCCTCCTGCCAGGTAGTTCCCACTGA...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCACTATCCATGTAAATaGCACCAGCAAGCGACTCAA +
Preference number: 2 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILHYPCK*HQQATQ
Trigger: TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACCAGTATCTGTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCAGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TSICLFCRLSHLAFLFSAGTWSS*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCC...TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAACTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 2 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 2 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACTCACTTACATATAAATaGAGCATTCCACGAAGCATC +
Preference number: 2 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHSLTYK*SIPRSI
Trigger: GATGCTTCGTGGAATGCTGCATTTATATGTAAGTGA...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675540.1
3UTR-3UTR GCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACTATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTACTTTGTACTGGGAATaGCTATGCGAGCTTCAGACT +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSTLYWE*LCELQT
Trigger: AGTCTGAAGCTCGCATAGGCATTCCCAGTACAAAGT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATACCCCGCCCCATCCCTTaGATATTAAGCATGAACACT +
Preference number: 2 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIPRPIP*ILSMNT
Trigger: AGTGTTCATGCTTAATATTCAAGGGATGGGGCGGGG...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGACAGACATTTGGTCATaGTTTTCTAGAGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLTDIWS*FSREEV
Trigger: AACCTCCTCTCTAGAAAATCATGACCAAATGTCTGT...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 2 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCAC +
Preference number: 2 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFTTVFF*WIPEPH
Trigger: GTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGT...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATACAGGAGAGACAGCTTTaGAGTACTTGTGGTAGTCGT +
Preference number: 2 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIQERQL*STCGSR
Trigger: ACGACTACCACAAGTACTTCAAAGCTGTCTCTCCTG...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACTTTGTAGAGACAACATaGAACCAGACTTCTTCAACT +
Preference number: 2 (lower is better)
Translates to: EILPSRAQGLFPISPFNYFVETT*NQTSST
Trigger: AGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAA...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR GCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAATTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 2 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 2 (lower is better)
Translates to: GITAITGLPSEVDLLAFPNLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 2 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGAC +
Preference number: 2 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFLYSQR*KDGVVD
Trigger: GTCAACAACACCATCTTTGCATCGCTGGCTGTAAAG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTACTGGGAATGCCTATaGGAGCTTCAGACTTCTCAA +
Preference number: 2 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFYWECL*ELQTSQ
Trigger: TTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGTA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTGCACACACGGAGAGATaGAGAAGAATCTACATCATC +
Preference number: 2 (lower is better)
Translates to: VARVFPACSNLADFLGKSAHTER*RRIYII
Trigger: GATGATGTAGATTCTTCTCCATCTCTCCGTGTGTGC...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAGCACACACGGAGAGATaGAGAAGAATCTACATCATC +
Preference number: 2 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIAHTER*RRIYII
Trigger: GATGATGTAGATTCTTCTCCATCTCTCCGTGTGTGC...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAA +
Preference number: 2 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFASRKK*TAFPCQ
Trigger: TTGACACGGGAAAGCAGTCCATTTCTTACGACTTGC...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp AACATGAAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTACACAGGAAAGTGTaGAATCTGAGGTATGGGTTT +
Preference number: 2 (lower is better)
Translates to: NMKPDFFNSMDMVTSPERVHRKV*NLRYGF
Trigger: AAACCCATACCTCAGATTCCACACTTTCCTGTGTAC...ACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTTCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp ACTGGGAATGCCTATGCGAGCTTCAGACTTCTCAATATCTTCCATGAATTTAAATGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTT +
Preference number: 2 (lower is better)
Translates to: TGNAYASFRLLNIFHEFKCCKIC*NFNVEL
Trigger: AAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCA...TTTAAATTCATGGAAGATATTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSNLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTTTATCTGCATCTGGATaGTCAAACATACATCTTGGT +
Preference number: 2 (lower is better)
Translates to: KTFLLVAASWDSTPARLSLSASG*SNIHLG
Trigger: ACCAAGATGTATGTTTGATCATCCAGATGCAGATAA...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR TCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKVSHSK*ELQLFQ
Trigger: CTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAAC...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR GCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTTGCCATTCGCCAGCATaGAGTCTTTTGTCATTTCAT +
Preference number: 2 (lower is better)
Translates to: LGGIFKQPYSESFNTEERCHSPA*SLLSFH
Trigger: ATGAAATGACAAAAGACTGCATGCTGGCGAATGGCA...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAATCATAACTGCCATTaGCGAGATTTTGATTGTAAG +
Preference number: 2 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILNHNCH*RDFDCK
Trigger: CTTACAATCAAAATCTCGCCAATGGCAGTTATGATT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGTATAGCACAGAGTTCTaGAACCAGTATCTGTTTATT +
Preference number: 2 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRYSTEF*NQYLFI
Trigger: AATAAACAGATACTGGTTCCAGAACTCTGTGCTATA...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAAACCAAAAGCAGCACTaGATGGGCAAGAGAAAGATA +
Preference number: 2 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRINQKQH*MGKRKI
Trigger: TATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTT...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR-3UTR TCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: LGGIFKQPYSESFNTEERSFFSS*NCTKSS
Trigger: TGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGA...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTTCCAAAGCATCTTGTaGTATCTTCAGGAGGATAGA +
Preference number: 2 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFFQSIL*YLQEDR
Trigger: TCTATCCTCCTGAAGATACCACAAGATGCTTTGGAA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp ACTGGGAATGCCTATGCGAGCTTCAGACTTCTCAATATCTTCCATGAATTTAAACAGTATCAACCGACTTaGAACACTTGTTTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: TGNAYASFRLLNIFHEFKQYQPT*NTCFSR
Trigger: TCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTG...TTTAAATTCATGGAAGATATTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CCA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGAGGCCTCAACACATATaGTGGGAAAACGTCATCATC +
Preference number: 2 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWRPQHI*WENVII
Trigger: GATGATGACGTTTTCCCACCATATGTGTTGAGGCCT...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CAA 90 bp GGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTaGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAG +
Preference number: 2 (lower is better)
Translates to: GDSVFYLHLDDQTYI*VESSNNHIPSLSIQ
Trigger: CTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CCA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTAATCATAACTGCCATTaGCGAGATTTTGATTGTAAG +
Preference number: 2 (lower is better)
Translates to: VARVFPACSNLADFLGKSNHNCH*RDFDCK
Trigger: CTTACAATCAAAATCTCGCCAATGGCAGTTATGATT...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCATGAACACTGTACATaGATAGATCACTTTTACAAG +
Preference number: 2 (lower is better)
Translates to: TKSKTKSSTEWARERYLRHEHCT*IDHFYK
Trigger: CTTGTAAAAGTGATCTATGCATGTACAGTGTTCATG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR TCA 72 bp CGTACTTTACAGCCAGCGATGCAAAGATGGTGTTGTTaGCCAGGGCAGACCGCAGGTCTGTCAGGACCCCCG +
Preference number: 3 (lower is better)
Translates to: RTLQPAMQRWCC*PGQTAGLSGPP
Trigger: CGGGGGTCCTGACAGACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGCATCGCTGGCTGTAAAGTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 3 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCA +
Preference number: 3 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPCPMAV*IVTRGP
Trigger: TGGTCCACGAGTCACAATCAACACGGCCATTGGACA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp GGGCTCTGCTCAGAATCCATCCTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCAGGCATTACGGCCATC +
Preference number: 3 (lower is better)
Translates to: GLCSESILPLST*IVSVVPGITAI
Trigger: GATGGCCGTAATGCCTGGTACGACAGACACTATTCAAGTGCTCAAGGGCAGGATGGATTCTGAGCAGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 3 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACC +
Preference number: 3 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLPALEH*NSVCRT
Trigger: GGTACGACAGACACTATTCAAGTGCTCAAGGGCAGG...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTAGAATAAGTCCAGGATaGGGGCCAAGAGTCCTTGAG +
Preference number: 3 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLRISPG*GPRVLE
Trigger: CTCAAGGACTCTTGGCCCCAATCCTGGACTTATTCT...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGCAGGGGGATCAAATATaGACACCACCATGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWQGDQI*TPPCGW
Trigger: CCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTG...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCCTAAGGAGGATTTTTaGGGCATTTTCCATTCATAT +
Preference number: 3 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPPKEDF*GIFHSY
Trigger: ATATGAATGGAAAATGCCCAAAAAATCCTCCTTAGG...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 72 bp AATAGCAGCCCAGCAGGGCTTCCACACAGTCCGCTATaGTTTTGTCAGCAATACACTGCTCAGTGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: NSSPAGLPHSPL*FCQQYTAQCAS
Trigger: ACTTGCACACTGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGGAAGCCCTGCTGGGCTGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 72 bp GAAGTACTTGTGGTAGTCGTACTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGACCAGGGCAGACCGCAG +
Preference number: 3 (lower is better)
Translates to: EVLVVVVLYSQR*KDGVVDQGRPQ
Trigger: CTGCGGTCTGCCCTGGTCAACAACACCATCTTTGCATCGCTGGCTGTAAAGTACGACTACCACAAGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp GACTCGTGGACCACCATCGTCAGGCCTCAACACATATaGTGGGAAAACGTCATCATCATCCATGACAGGATC +
Preference number: 3 (lower is better)
Translates to: DSWTTIVRPQHI*WENVIIIHDRI
Trigger: GATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp ATTGATGTGTCCAATGGCCGTGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCTCAACACATATGGTGG +
Preference number: 3 (lower is better)
Translates to: IDVSNGRVDCDS*TTIVRPQHIWW
Trigger: CCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACACATCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGGCAAAGATGGTGTTGTaGACCAGGGCAGACCGCAGG +
Preference number: 3 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMAKMVL*TRADRR
Trigger: CCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGC...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTCAAACACTCTGGAATaGCTTTTGGGTAGCACTGCC +
Preference number: 3 (lower is better)
Translates to: VSVVPGITAITGLPSEVDSNTLE*LLGSTA
Trigger: GGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp CATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTaGCATCCCACTATCCATGTAAATGGCACCAGCAAG +
Preference number: 3 (lower is better)
Translates to: HHGIVHLPDCLQ*HPTIHVNGTSK
Trigger: CTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR TCA 72 bp CTGAAACTTCAACGTGGAGCTTACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCACAGACATTTGGTCAT +
Preference number: 3 (lower is better)
Translates to: LKLQRGAYQGTR*ATFCSSQTFGH
Trigger: ATGACCAAATGTCTGTGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTAAGCTCCACGTTGAAGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp CTGGAATTGCTTTTGGGTAGCACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAACACTGGTCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: LELLLGSTAFVS*NLVFLEHWSLL
Trigger: AAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGTGCTACCCAAAAGCAATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 3 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCCCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 3 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACC +
Preference number: 3 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILPALEH*NSVCRT
Trigger: GGTACGACAGACACTATTCAAGTGCTCAAGGGCAGG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATTGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 3 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHCVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGATGCAAAGATGGTGTaGTTGACCAGGGCAGACCGC +
Preference number: 3 (lower is better)
Translates to: KTFLLVAASWDSTPARLSDAKMV*LTRADR
Trigger: GCGGTCTGCCCTGGTCAACAACACCATCTTTGCATC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 72 bp GGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCACCACAAAGTCATCTTC +
Preference number: 3 (lower is better)
Translates to: GLLSRVNTTVFF*WIPEPHHKVIF
Trigger: GAAGATGACTTTGTGGTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 72 bp AGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATaGGGTAGTCCAAAATCGCATCTCCCAGGAATTCTA +
Preference number: 3 (lower is better)
Translates to: SAAAGLHKGAWL*GSPKSHLPGIL
Trigger: TAGAATTCCTGGGAGATGCGATTTTGGACTACCTCATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp AGACTGTCTCCAGTGACATCCCACTATCCATGTAAATaGCACCAGCAAGCGACTCAAAAATATCCCCCATGG +
Preference number: 3 (lower is better)
Translates to: RLSPVTSHYPCK*HQQATQKYPPW
Trigger: CCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp CCATTAATTGCTGTAAGATCTGCTGAAACTTCAACGTaGAGCTTACCAGGGGACTCGCTGAGCAACGTTCTG +
Preference number: 3 (lower is better)
Translates to: PLIAVRSAETST*SLPGDSLSNVL
Trigger: CAGAACGTTGCTCAGCGAGTCCCCTGGTAAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCAATTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp TCGTGGACCACCATCGTCAGGCCTCAACACATATGGTaGGAAAACGTCATCATCATCCATGACAGGATCAAT +
Preference number: 3 (lower is better)
Translates to: SWTTIVRPQHIW*ENVIIIHDRIN
Trigger: ATTGATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCCACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp GCCTTCGTTTCGTGGAACCTGGTCTTCCTGGAACACTaGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: AFVSWNLVFLEH*SLLHHANQAPL
Trigger: AAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp GTAGCACTGCCTTCGTTTCGTGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTCATCATGCAAATCAAG +
Preference number: 3 (lower is better)
Translates to: VALPSFRGTWSS*NTGLFFIMQIK
Trigger: CTTGATTTGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp CTTTCAGCCAATCGTACACAGCTCATTGGTGGACCAACAATGGAGGCTCGAAGACCAGTATCAACCGACTaGGAACACTTGTTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: LSANRTQLIGGPTMEARRPVSTD*EHLFLK
Trigger: CTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGG...TCTTCGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGATTGGCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp CAGATTACAGTTGCTGACCTTTTTGCTTCTCATATATaGAAGGCGGCCCTCATGCGCATCAGGGTAAGTGCA +
Preference number: 3 (lower is better)
Translates to: QITVADLFASHI*KAALMRIRVSA
Trigger: TGCACTTACCCTGATGCGCATGAGGGCCGCCTTTCATATATGAGAAGCAAAAAGGTCAGCAACTGTAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 3 (lower is better)
Translates to: GITAITGLPSEVDLLAFPGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAGTGGCTGGTTGAGATaGGTTAGGTCAAGGTTGTAC +
Preference number: 3 (lower is better)
Translates to: KTFLLVAASWDSTPARLSSGWLR*VRSRLY
Trigger: GTACAACCTTGACCTAACCAATCTCAACCAGCCACT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTTCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: LGGIFKQPYSESFNTEERSSSGW*RLVRSR
Trigger: CCTTGACCTAACCAATCTCAACCAGCCACTGCTGGA...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp CCAGTTCGCCAATTTTGTGCAGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAGCCAATCGTACACAGC +
Preference number: 3 (lower is better)
Translates to: PVRQFCAVSHSK*ELQLFQPIVHS
Trigger: GCTGTGTACGATTGGCTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAACTGCACAAAATTGGCGAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR GCA 72 bp GCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCCCCTTCTGATTCAAAT +
Preference number: 3 (lower is better)
Translates to: ADFPIWLSSSQH*LKEALSPSDSN
Trigger: ATTTGAATCAGAAGGGGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp CAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAACACCACAGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: QQYTAQCASRKK*TAFPCQHHSFL
Trigger: AAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp AGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTaGTTGAGATTGGTTAGGTCAAGGTTGTACTTTGTT +
Preference number: 3 (lower is better)
Translates to: SLEDVWSTSSSG*LRLVRSRLYFV
Trigger: AACAAAGTACAACCTTGACCTAACCAATCTCAACCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCACCAGCATGCAGTCTTTaGTCATTTCATCTTTTTCCC +
Preference number: 3 (lower is better)
Translates to: GITAITGLPSEVDLLAFPPACSL*SFHLFP
Trigger: GGGAAAAAGATGAAATGACAAAAGACTGCATGCTGG...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGCCAGCATGCAGTCTTTaGTCATTTCATCTTTTTCCC +
Preference number: 3 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVPACSL*SFHLFP
Trigger: GGGAAAAAGATGAAATGACAAAAGACTGCATGCTGG...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGTTCCGCCTTCTAAAGTaGAGTTCATCAGGTAAAGGT +
Preference number: 3 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVFRLLK*SSSGKG
Trigger: ACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAA...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp TCAACACATATGGTGGGAAAACGTCATCATCATCCATaGCAGGATCAATGTCAGTCTCACCAGTATCAACCG +
Preference number: 3 (lower is better)
Translates to: STHMVGKRHHHP*QDQCQSHQYQP
Trigger: CGGTTGATACTGGTGAGACTGACATTGATCCTGTCATGGATGATGATGACGTTTTCCCACCATATGTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR TCA 72 bp TCAGGCAACTCTCGGGTTCTGCATTTAGGAGCTAGATaGGTAAACGGATCACTTGGTAATCTAGCACAGTAT +
Preference number: 3 (lower is better)
Translates to: SGNSRVLHLGAR*VNGSLGNLAQY
Trigger: ATACTGTGCTAGATTACCAAGTGATCCGTTTACTCATCTAGCTCCTAAATGCAGAACCCGAGAGTTGCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCACATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 3 (lower is better)
Translates to: GITAITGLPSEVDLLAFPHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR TCA 72 bp ATTGTAAGAAAGACCATTAATTGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTTACCAGGGGACTCGCT +
Preference number: 3 (lower is better)
Translates to: IVRKTINCCKIC*NFNVELTRGLA
Trigger: AGCGAGTCCCCTGGTAAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCAATTAATGGTCTTTCTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp CAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGTAACTGTATAAATTCT +
Preference number: 3 (lower is better)
Translates to: QGIYYSGEYIHR*AGAGSRNCINS
Trigger: AGAATTTATACAGTTACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAATTCACATCCAGCCTaGTTAACTGCACACTTTTAC +
Preference number: 3 (lower is better)
Translates to: KTFLLVAASWDSTPARLSNSHPA*LTAHFY
Trigger: GTAAAAGTGTGCAGTTAACAAGGCTGGATGTGAATT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675540.1
3UTR-3UTR CAA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 3 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 72 bp CCCCATCCCTTGAATATTAAGCATGAACACTGTACATaGATAGATCACTTTTACAAGGCCAACACGATGAGA +
Preference number: 3 (lower is better)
Translates to: PHPLNIKHEHCT*IDHFYKANTMR
Trigger: TCTCATCGTGTTGGCCTTGTAAAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR GCA 72 bp TTCTTCAACAGCTTTGCTAGGATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTCAAAATCCTCAAAATC +
Preference number: 3 (lower is better)
Translates to: FFNSFARIQIAH*IPRAVVKILKI
Trigger: GATTTTGAGGATTTTGACTACAGCTCTTGGGATGCAATGTGCTATCTGGATCCTAGCAAAGCTGTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATACCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 3 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 3 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 3 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR-3UTR CAA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGTGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWCRLSH*AFLFSA
Trigger: TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCA...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp TCATATTTAACAGTCTCTTTCCCAACTGGCATCAAATaGTCATCCAGTTCGCCAATTTTGTGCAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: SYLTVSFPTGIK*SSSSPILCSFS
Trigger: TGAGAAACTGCACAAAATTGGCGAACTGGATGACCATTTGATGCCAGTTGGGAAAGAGACTGTTAAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 3 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFCVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR GCA 72 bp TTCAAACCCCGATATAAGGTGATTCAGTGTTTTATCTaGATCTGGATGATCAAACATACATCTTGGTGGAAT +
Preference number: 3 (lower is better)
Translates to: FKPRYKVIQCFI*IWMIKHTSWWN
Trigger: ATTCCACCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATATCGGGGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CCA 72 bp AAAAGTTTCATACTCAGGGGAAGGAAATTTACTGAGTaGGGTAAGATCAGTGTACACATCAGCTACATAAAA +
Preference number: 3 (lower is better)
Translates to: KSFILRGRKFTE*GKISVHISYIK
Trigger: TTTTATGTAGCTGATGTGTACACTGATCTTACCCCACTCAGTAAATTTCCTTCCCCTGAGTATGAAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CCA 72 bp TGTTTTATCTGCATCTGGATGATCAAACATACATCTTaGTGGAATCTTCAAACAACCATATTCCGAGTCTTT +
Preference number: 3 (lower is better)
Translates to: CFICIWMIKHTS*WNLQTTIFRVF
Trigger: AAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTAGGAAGCAGGGGTCATaGGCTGCAGGCCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSRKQGS*AAGLPC
Trigger: GCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCT...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTGAACAGAGGAAAAGCTaGGCAGCCCTCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPEQRKS*AALSPQ
Trigger: CTGTGGGGAGAGGGCTGCTCAGCTTTTCCTCTGTTC...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCGAACAGAGGAAAAGCTaGGCAGCCCTCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILEQRKS*AALSPQ
Trigger: CTGTGGGGAGAGGGCTGCTCAGCTTTTCCTCTGTTC...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCTACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILYQGTR*ATFCSS
Trigger: TGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTA...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPRGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCCAAAGATGGTGTTGTTaGCCAGGGCAGACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILQRWCC*PGQTAG
Trigger: ACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTG...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCACAGCTGACACTTGTTaGGCAACCTGGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILTADTC*ATWFAE
Trigger: CTCTGCAAACCAGGTTGCTCAACAAGTGTCAGCTGT...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATCAATACAGAAGAGCGTaGACTGGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYQYRRA*TGHRSS
Trigger: GCTGCTTCTGTGGCCAGTTCACGCTCTTCTGTATTG...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCCATTCACCTGGGCCTaGAGCAGCCTGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILPFTWA*SSLRRA
Trigger: GGCGCGGCGCAGGCTGCTGCAGGCCCAGGTGAATGG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILGTWSS*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCC...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATAGCGCTTTCCCCTTCTaGTTCAAATGTCGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYSAFPF*FKCRGV
Trigger: GACACCTCGACATTTGAATCAGAAGGGGAAAGCGCT...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCACGGGGCCTTGTGCATaGACTGCGCTCGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESTGPCA*TALDLD
Trigger: ATCCAGATCGAGCGCAGTTCATGCACAAGGCCCCGT...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675540.1
CDS-3UTR CCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCGCATCGCTGGCAGTCTaGGCTCTTAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESASLAV*ALSSSA
Trigger: TGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGC...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTCCACGCCAGCATCGCTaGCAGTCTGGGCTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLPRQHR*QSGLLA
Trigger: AGCTAAGAGCCCAGACTGCCAGCGATGCTGGCGTGG...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATTCTGAATGGAATATaGGGTAGTTGGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILILNGI*GSWLHG
Trigger: CCCGTGCAACCAACTACCTCATATTCCATTCAGAAT...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCCAATACAGAAGAGCGTaGACTGGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPQYRRA*TGHRSS
Trigger: GCTGCTTCTGTGGCCAGTTCACGCTCTTCTGTATTG...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGGCAGGGGTCATGAGCTaGAGGCCTGCCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWAGVMS*RPAMLR
Trigger: CCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGC...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYSSSQH*LKEALS
Trigger: GGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGA...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATTCCCTTACTATCAGGTaGAACAGCGACCGGGAACAT +
Preference number: 4 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHSLTIR*NSDREH
Trigger: ATGTTCCCGGTCGCTGTTGCACCTGATAGTAAGGGA...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATACATCCAGCAGTGGCTaGTTGAGATTGGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYTSSSG*LRLVRS
Trigger: TGACCTAACCAATCTCAACCAGCCACTGCTGGATGT...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGCATCGCTGGCAGTCTaGGCTCTTAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTASLAV*ALSSSA
Trigger: TGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESEYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGGAAGCAGGGGTCATaGGCTGCAGGCCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQRKQGS*AAGLPC
Trigger: GCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATTACTGGGAATGCCTATaGGAGCTTCAGACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYYWECL*ELQTSQ
Trigger: TTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGTA...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTGTCTTCCTGGAACACTaGTCTCTTCTTCATCATGCA +
Preference number: 4 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSVFLEH*SLLHHA
Trigger: TGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGAC...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPTAFVS*NLVFLE
Trigger: TTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGT...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTTAGTGGCCGCATCATaGGATAGTACACCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPLVAAS*DSTPAR
Trigger: TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp AGGGCTCTGCTCAGAATCCATCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACCAGGCATTACGGCCAT +
Preference number: 4 (lower is better)
Translates to: RALLRIHPALEH*NSVCRTRHYGH
Trigger: ATGGCCGTAATGCCTGGTACGACAGACACTATTCAAGTGCTCAAGGGCAGGATGGATTCTGAGCAGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CCTCTTCCTTCGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTTCTAGGATTGCAAGATaGCACTCATCAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: PLPSEPSTSGSPPPHPPPSRIAR*HSSNTK
Trigger: TTTGGTGTTTGATGAGTGTCATCTTGCAATCCTAGA...AGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCGAAGGAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACACCAGCAGTGGCTGGTTaGGATTGGTTAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTPAVAG*DWLGQG
Trigger: ACCTTGACCTAACCAATCTCAACCAGCCACTGCTGG...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCCCAGACTGTCTCCAGTaGCATCCCACTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESPDCLQ*HPTIHV
Trigger: TACATGGATAGTGGGATGTCACTGGAGACAGTCTGG...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCAGTTCGCCAATTTTGTaGAGTTTCTCACAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RSPPHQALLLLILLLVILSSPIL*SFSQQM
Trigger: CATTTGCTGTGAGAAACTGCACAAAATTGGCGAACT...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATCTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHLYSQR*KDGVVD
Trigger: GTCAACAACACCATCTTTGCATCGCTGGCTGTAAAG...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATCCTCAACACATATGGTaGGAAAACGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYPQHIW*ENVIII
Trigger: GATGATGATGACGTTTTCCCACCATATGTGTTGAGG...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTVDCDS*TTIVRP
Trigger: AGGCCTGACGATGGTGGTCCACGAGTCACAATCAAC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATCTCTGGAATTGCTTTTaGGTAGCACTGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHLWNCF*VALPSF
Trigger: AAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAG...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GTGTCCAATGGCCGTGTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAATCTGAGGTATGGGTTTaGCCGTCAGTATTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSNGRVDCDSWTTIVRPQSEVWV*PSVFQS
Trigger: GCTTTGGAATACTGACGGCCAAACCCATACCTCAGA...TTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TGTCAGGACCCCCGGGGAGTGCTGCCGCGGGTCTTCATAAAGGTGCTTGGTTATGTACACAGGAAAGTGTaGAATCTGAGGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: CQDPRGVLPRVFIKVLGYVHRKV*NLRYGF
Trigger: AAACCCATACCTCAGATTCCACACTTTCCTGTGTAC...ATAACCAAGCACCTTTATGAAGACCCGCGGCAGCACTCCCCGGGGGTCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAGGAAGCAGGGGTCATaGGCTGCAGGCCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFRKQGS*AAGLPC
Trigger: GCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTCCTCTTGCTCATGTTTaGTGTATTTCTGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSPLAHV*CISVVL
Trigger: GAGAACTACAGAAATACATCAAACATGAGCAAGAGG...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 4 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACAGAGGAAAAGCTaGGCAGCCCTCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLEQRKS*AALSPQ
Trigger: CTGTGGGGAGAGGGCTGCTCAGCTTTTCCTCTGTTC...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCATGAGCTGCAGGCCTaGCATGCTGAGGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILHELQA*HAEGLQ
Trigger: TTGCAACCCCTCAGCATGGCAGGCCTGCAGCTCATG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGCATGAGCTGCAGGCCTaGCATGCTGAGGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRHELQA*HAEGLQ
Trigger: TTGCAACCCCTCAGCATGGCAGGCCTGCAGCTCATG...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGCAGGGGTCATGAGCTaGAGGCCTGCCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSAGVMS*RPAMLR
Trigger: CCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGC...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp GTGTCCAATGGCCGTGTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAAGACCACCAGGTCAGTTaGAGTTTCAGCATTACTCTT +
Preference number: 4 (lower is better)
Translates to: VSNGRVDCDSWTTIVRPQDHQVS*SFSITL
Trigger: AAGAGTAATGCTGAAACTGCAACTGACCTGGTGGTC...TTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp GTGTCCAATGGCCGTGTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAATACTGGGAATGCCTATaGGAGCTTCAGACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VSNGRVDCDSWTTIVRPQYWECL*ELQTSQ
Trigger: TTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGTA...TTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATATATTGACACCACCATaGGGCTGGGTAGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDILTPP*GWVVPS
Trigger: AGAAGGGACTACCCAGCCGCATGGTGGTGTCAATAT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GTGTCCAATGGCCGTGTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAAAGGCCTCAACACATATaGTGGGAAAACGTCATCATC +
Preference number: 4 (lower is better)
Translates to: VSNGRVDCDSWTTIVRPQRPQHI*WENVII
Trigger: GATGATGACGTTTTCCCACCATATGTGTTGAGGCCT...TTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACATACACAGCTCATTGGTaGACCAACAATGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTYTAHW*TNNGGS
Trigger: CGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTA...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCACGCCAGCATCGCTaGCAGTCTGGGCTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSPRQHR*QSGLLA
Trigger: AGCTAAGAGCCCAGACTGCCAGCGATGCTGGCGTGG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp GCAGCACAGCTCACTGAAAGGTTCTTTTGTTGGCTGTaGAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AAQLTERFFCWL*KFSRVGHRAFS
Trigger: GGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTCAGTGAGCTGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp CTAGCACAGTATCTATTGATGTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCACCATCGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LAQYLLMCPMAV*IVTRGPPSSGL
Trigger: GAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACACATCAATAGATACTGTGCTAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCGAAAGGACCCATTGGTaGGGAAGCAGGGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILERTHW*GSRGHE
Trigger: CTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTC...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACACAGACGATGGTATTATaGTCCAGAGCTGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTQTMVL*SRAASS
Trigger: GCTTGAAGCAGCTCTGGATCATAATACCATCGTCTG...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTGTTTGTTGCGAGGCTaGTTCTTCCCAATGCCATGT +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDCLLRG*FFPMPC
Trigger: ACATGGCATTGGGAAGAATCAGCCTCGCAACAAACA...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATGGAGGCTCGAAGAGGTaGGTTAATTGGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDGGSKR*VNWQIK
Trigger: CTTTATCTGCCAATTAACTCACCTCTTCGAGCCTCC...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPYQGTR*ATFCSS
Trigger: TGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTA...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGGGGCCAAGAGTCCTTaGGGAGTACCCAATAGAAGG +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQGAKSP*GVPNRR
Trigger: CCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGGGGGCCAAGAGTCCTTaGGGAGTACCCAATAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRGAKSP*GVPNRR
Trigger: CCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCC...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRRGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCAAAGATGGTGTTGTTaGCCAGGGCAGACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILQRWCC*PGQTAG
Trigger: ACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACCAGACTGTCTCCAGTaGCATCCCACTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQPDCLQ*HPTIHV
Trigger: TACATGGATAGTGGGATGTCACTGGAGACAGTCTGG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCCATTCACCTGGGCCTaGAGCAGCCTGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNPFTWA*SSLRRA
Trigger: GGCGCGGCGCAGGCTGCTGCAGGCCCAGGTGAATGG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGAGGCAGGTGAGAAGTaGTCTTCACATAGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTEAGEK*SSHSAC
Trigger: ACATGCACTATGTGAAGAGCACTTCTCACCTGCCTC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGCCAATAGAAGGGCTCTaGTCAGAATCCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWPIEGL*SESILP
Trigger: GGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQEYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp AACCAGGAGGAAGCCAATTCACAGGGGGATCAAATATaGACACCACCATGCGGCTGGGTAGTCCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NQEEANSQGDQI*TPPCGWVVPSF
Trigger: AAAAGAAGGGACTACCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACCAGACGATGGTATTATaGTCCAGAGCTGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHQTMVL*SRAASS
Trigger: GCTTGAAGCAGCTCTGGATCATAATACCATCGTCTG...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GGACCACCATCGTCAGGCCTCAACACATATGGTGGGAAAACGTCATCATCATCCACCTTGAGATCTGAATaGGTTCTGACAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: GPPSSGLNTYGGKTSSSSTLRSE*VLTADT
Trigger: AGTGTCAGCTGTCAGAACTCATTCAGATCTCAAGGT...GGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 4 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCGGGGCCAAGAGTCCTTaGGGAGTACCCAATAGAAGG +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSGAKSP*GVPNRR
Trigger: CCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCC...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACTCCATCACTAGCGTTTaGCAGAGTCAAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHSITSV*QSQSLK
Trigger: CTTCAGGCTTTGACTCTGTCAAACGCTAGTGATGGA...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACAGGAGAGACAGCTTTaGAGTACTTGTGGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQQERQL*STCGSR
Trigger: ACGACTACCACAAGTACTTCAAAGCTGTCTCTCCTG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACATACTGGGAATGCCTATaGGAGCTTCAGACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTYWECL*ELQTSQ
Trigger: TTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGTA...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATACTTTGTACTGGGAATaGCTATGCGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDTLYWE*LCELQT
Trigger: AGTCTGAAGCTCGCATAGGCATTCCCAGTACAAAGT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACACCACACAGTCCGCTATaGTTTTGTCAGCAATACACT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTPHSPL*FCQQYT
Trigger: AGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGG...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTGTTACTCCATTCACCTaGGCCTGCAGCAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFVTPFT*ACSSLR
Trigger: GCGCAGGCTGCTGCAGGCCCAGGTGAATGGAGTAAC...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGATATAAGCCAGCTCTaGATCTTGTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTDISQL*ILFASF
Trigger: GAAGCTGGCAAACAAGATCCAGAGCTGGCTTATATC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAAGGCCTCAACACATATaGTGGGAAAACGTCATCATC +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTRPQHI*WENVII
Trigger: GATGATGACGTTTTCCCACCATATGTGTTGAGGCCT...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGTTGGTGGACCAACAATaGAGGCTCGAAGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWLVDQQ*RLEEVS
Trigger: ACTCACCTCTTCGAGCCTCCATTGTTGGTCCACCAA...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTGTCTTCCTGGAACACTaGTCTCTTCTTCATCATGCA +
Preference number: 4 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLVFLEH*SLLHHA
Trigger: TGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGAC...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTTCCAAAGCATCTTGTaGTATCTTCAGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPFQSIL*YLQEDR
Trigger: TCTATCCTCCTGAAGATACCACAAGATGCTTTGGAA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGGCATCGCTGGCAGTCTaGGCTCTTAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SISIKVFITQESTFIAGLASLAV*ALSSSA
Trigger: TGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGC...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCCCACGCCAGCATCGCTaGCAGTCTGGGCTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFPRQHR*QSGLLA
Trigger: AGCTAAGAGCCCAGACTGCCAGCGATGCTGGCGTGG...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTASRKK*TAFPCQ
Trigger: TTGACACGGGAAAGCAGTCCATTTCTTACGACTTGC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDASRKK*TAFPCQ
Trigger: TTGACACGGGAAAGCAGTCCATTTCTTACGACTTGC...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATGCACACACGGAGAGATaGAGAAGAATCTACATCATC +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDAHTER*RRIYII
Trigger: GATGATGTAGATTCTTCTCCATCTCTCCGTGTGTGC...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCACAACTACTGCAGGACTaGCACTACTGCACACACGGA +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPQLLQD*HYCTHG
Trigger: TCCGTGTGTGCAGTAGTGCCAGTCCTGCAGTAGTTG...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAGATCTGAATGAGTTCTaGCAGCTGACACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQDLNEF*QLTLVE
Trigger: CTCAACAAGTGTCAGCTGTCAGAACTCATTCAGATC...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCCTCAGAATCACTCCATaGCACATAATTATCCTGATT +
Preference number: 4 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPLRITP*HIIILI
Trigger: AATCAGGATAATTATGTGTCATGGAGTGATTCTGAG...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACGTCATCATCATCCATaGCAGGATCAATGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQRHHHP*QDQCQS
Trigger: AGACTGACATTGATCCTGTCATGGATGATGATGACG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACCGTCATCATCATCCATaGCAGGATCAATGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHRHHHP*QDQCQS
Trigger: AGACTGACATTGATCCTGTCATGGATGATGATGACG...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTVSHSK*ELQLFQ
Trigger: CTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAAC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACCCAGCAGTGGCTGGTTaGGATTGGTTAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYPAVAG*DWLGQG
Trigger: ACCTTGACCTAACCAATCTCAACCAGCCACTGCTGG...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGCGCTTTCCCCTTCTaGTTCAAATGTCGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSAFPF*FKCRGV
Trigger: GACACCTCGACATTTGAATCAGAAGGGGAAAGCGCT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGAGCGCTTTCCCCTTCTaGTTCAAATGTCGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLSAFPF*FKCRGV
Trigger: GACACCTCGACATTTGAATCAGAAGGGGAAAGCGCT...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAACTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLRGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCAATACAGAAGAGCGTaGACTGGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSQYRRA*TGHRSS
Trigger: GCTGCTTCTGTGGCCAGTTCACGCTCTTCTGTATTG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCAAAGATGGTGTTGTTaGCCAGGGCAGACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLQRWCC*PGQTAG
Trigger: ACCTGCGGTCTGCCCTGGTCAACAACACCATCTTTG...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCGCCATGCTGAGGGGTTaGAAAGCAGGGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILAMLRG*KAGLFI
Trigger: AATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGC...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATCCAGCTACTTTATCTaGACACCAGGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSSYFI*TPGSQN
Trigger: GTTCTGGGACCCTGGTGTGCAGATAAAGTAGCTGGA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCCAATAGAAGGGCTCTaGTCAGAATCCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSPIEGL*SESILP
Trigger: GGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACATGCCATTCGCCAGCATaGAGTCTTTTGTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTCHSPA*SLLSFH
Trigger: ATGAAATGACAAAAGACTGCATGCTGGCGAATGGCA...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTTGCCATTCGCCAGCATaGAGTCTTTTGTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLCHSPA*SLLSFH
Trigger: ATGAAATGACAAAAGACTGCATGCTGGCGAATGGCA...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACCACACAGTCCGCTATaGTTTTGTCAGCAATACACT +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQPHSPL*FCQQYT
Trigger: AGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATCCCTTACTATCAGGTaGAACAGCGACCGGGAACAT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSLTIR*NSDREH
Trigger: ATGTTCCCGGTCGCTGTTGCACCTGATAGTAAGGGA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGTTACTCCATTCACCTaGGCCTGCAGCAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIVTPFT*ACSSLR
Trigger: GCGCAGGCTGCTGCAGGCCCAGGTGAATGGAGTAAC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSVDCDS*TTIVRP
Trigger: AGGCCTGACGATGGTGGTCCACGAGTCACAATCAAC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATTGGTGGACCAACAATaGAGGCTCGAAGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQLVDQQ*RLEEVS
Trigger: ACTCACCTCTTCGAGCCTCCATTGTTGGTCCACCAA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVTAFVS*NLVFLE
Trigger: TTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGT...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGTGTCAAAAGATTAAGTCTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGAGGGCTGATCAGGTCTaGGATAACTATCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GVKRLSLEDVWSTSSSGWRADQV*DNYPSN
Trigger: GTTTGAGGGATAGTTATCCCAGACCTGATCAGCCCT...CCAGCCACTGCTGGATGTGGACCACACATCTTCAAGACTTAATCTTTTGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGTCTTGAAGATGTGTaGTCCACATCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSLEDV*STSSSG
Trigger: GCCACTGCTGGATGTGGACCACACATCTTCAAGACT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAGTCTTGAAGATGTGTaGTCCACATCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILSLEDV*STSSSG
Trigger: GCCACTGCTGGATGTGGACCACACATCTTCAAGACT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAAGTCTTGAAGATGTGTaGTCCACATCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPSLEDV*STSSSG
Trigger: GCCACTGCTGGATGTGGACCACACATCTTCAAGACT...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATTATAGCACAGAGTTCTaGAACCAGTATCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHYSTEF*NQYLFI
Trigger: AATAAACAGATACTGGTTCCAGAACTCTGTGCTATA...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCACGCCAGCATCGCTaGCAGTCTGGGCTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPRQHR*QSGLLA
Trigger: AGCTAAGAGCCCAGACTGCCAGCGATGCTGGCGTGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGCCCTCTCCCCACAGCTaGTTAAATAGCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SISIKVFITQESTFIAGLPSPHS*LNSSPA
Trigger: TGCTGGGCTGCTATTTAACCAGCTGTGGGGAGAGGG...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACCTGGTTTGCAGAGTTaGCCAAGAACACCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARPGLQS*PRTPSF
Trigger: AAAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGG...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAACAATCTCACATGGCTaGGAAGTATACCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQTISHG*EVYLSK
Trigger: CTTAGACAGGTATACTTCTCAGCCATGTGAGATTGT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACATTTAGGAGCTAGATaGGTAAACGGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQHLGAR*VNGSLG
Trigger: ACCAAGTGATCCGTTTACTCATCTAGCTCCTAAATG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATACAGACATTTGGTCATaGTTTTCTAGAGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDTDIWS*FSREEV
Trigger: AACCTCCTCTCTAGAAAATCATGACCAAATGTCTGT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFYQGTR*ATFCSS
Trigger: TGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLTTVFF*WIPEPH
Trigger: GTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGT...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILTTVFF*WIPEPH
Trigger: GTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAAACCCCGATATAAGGTaGTTCAGTGTTTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTNPDIR*FSVLSA
Trigger: TGCAGATAAAACACTGAATCACCTTATATCGGGGTT...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCAGGAGAGACAGCTTTaGAGTACTTGTGGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILQERQL*STCGSR
Trigger: ACGACTACCACAAGTACTTCAAAGCTGTCTCTCCTG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGCACAAAGTCATCAATaGCATGGAAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLAQSHQ*HGRAQE
Trigger: CTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGC...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACCAGACTGTCTCCAGTaGCATCCCACTATCCATGTA +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARPDCLQ*HPTIHV
Trigger: TACATGGATAGTGGGATGTCACTGGAGACAGTCTGG...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAAGAAATGCCAGACCATaGCATTTCCAATCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTRNARP*HFQSVL
Trigger: AAGAACTGATTGGAAATGTCATGGTCTGGCATTTCT...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCGCCATGCTGAGGGGTTaGAAAGCAGGGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSAMLRG*KAGLFI
Trigger: AATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGC...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCATGAGCTGCAGGCCTaGCATGCTGAGGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRHELQA*HAEGLQ
Trigger: TTGCAACCCCTCAGCATGGCAGGCCTGCAGCTCATG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGCAGGGGTCATGAGCTaGAGGCCTGCCATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYAGVMS*RPAMLR
Trigger: CCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACAGGTTGGTCTCATGTaGTCGAAATTTCCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQQVGLM*SKFPKY
Trigger: GTACTTAGGAAATTTCGAGCACATGAGACCAACCTG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACAGAGATGGGTGCCCTTaGTCTTCCTTTAGATTGAAC +
Preference number: 4 (lower is better)
Translates to: EILPSRAQGLFPISPFNYRDGCP*SSFRLN
Trigger: GTTCAATCTAAAGGAAGAGCAAGGGCACCCATCTCT...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLSSSQH*LKEALS
Trigger: GGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGA...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCATCAACGGGGCCTTGTaGATGAACTGCGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLINGAL*MNCARS
Trigger: AGATCGAGCGCAGTTCATGCACAAGGCCCCGTTGAT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675540.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAACTTCTGTCAGTAAATaGTCCACAATCCACCACAAT +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTTSVSK*STIHHN
Trigger: ATTGTGGTGGATTGTGGACCATTTACTGACAGAAGT...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGTACACAGCTCATTGGTaGACCAACAATGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMYTAHW*TNNGGS
Trigger: CGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTA...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATCGTACACAGCTCATTaGTGGACCAACAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARSYTAH*WTNNGG
Trigger: GCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSGTWSS*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSTAFVS*NLVFLE
Trigger: TTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATCTGAGGTATGGGTTTaGCCGTCAGTATTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSEVWV*PSVFQS
Trigger: GCTTTGGAATACTGACGGCCAAACCCATACCTCAGA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAACATCCAGCAGTGGCTaGTTGAGATTGGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQTSSSG*LRLVRS
Trigger: TGACCTAACCAATCTCAACCAGCCACTGCTGGATGT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFEYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCCCTCTCCCCACAGCTaGTTAAATAGCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFPSPHS*LNSSPA
Trigger: TGCTGGGCTGCTATTTAACCAGCTGTGGGGAGAGGG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ATGTCAGTCTCACCAGTATCAACCGACTTGGAACACTTGTTTCTCAAGATCTTTCCCTCTCCCCACAGCTaGTTAAATAGCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MSVSPVSTDLEHLFLKIFPSPHS*LNSSPA
Trigger: TGCTGGGCTGCTATTTAACCAGCTGTGGGGAGAGGG...AAAGATCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGGTGAGACTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTERFFC*LLKFSR
Trigger: TCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAAGTCATCAATGACATaGAAGAGCTCAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHKSSMT*KSSGET
Trigger: TGTCTCTCCTGAGCTCTTCCATGTCATTGATGACTT...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACTCAGTGGGAACTACCTaGCAGGAGGACTTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: EILPSRAQGLFPISPFNYSVGTT*QEDFSK
Trigger: TTTACTAAAGTCCTCCTGCCAGGTAGTTCCCACTGA...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCTGGTTTGCAGAGTTaGCCAAGAACACCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSPGLQS*PRTPSF
Trigger: AAAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGG...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAATGAGTTCTGACAGCTaGCACTTGTTGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARMSSDS*HLLSNL
Trigger: CAGGTTGCTCAACAAGTGTCAGCTGTCAGAACTCAT...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACCTCTTGCTCATGTTTaGTGTATTTCTGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQPLAHV*CISVVL
Trigger: GAGAACTACAGAAATACATCAAACATGAGCAAGAGG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACATGGCAGATAAAGAGTTaGATAAAATGTACCATCAGG +
Preference number: 4 (lower is better)
Translates to: LLVAASWDSTPARLSPVTWQIKS*IKCTIR
Trigger: CCTGATGGTACATTTTATTCAACTCTTTATCTGCCA...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAGCGCTTTCCCCTTCTaGTTCAAATGTCGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFSAFPF*FKCRGV
Trigger: GACACCTCGACATTTGAATCAGAAGGGGAAAGCGCT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCAGGGGACTCGCTaGGCAACGTTCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIYQGTR*ATFCSS
Trigger: TGAACTGCAGAACGTTGCTCAGCGAGTCCCCTGGTA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGATTCTGAATGGAATATaGGGTAGTTGGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLILNGI*GSWLHG
Trigger: CCCGTGCAACCAACTACCTCATATTCCATTCAGAAT...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYTTVFF*WIPEPH
Trigger: GTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGT...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CTTTCAGCCAATCGTACACAGCTCATTGGTGGACCAACAATGGAGGCTCGAAGAAACCCCGATATAAGGTaGTTCAGTGTTTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: LSANRTQLIGGPTMEARRNPDIR*FSVLSA
Trigger: TGCAGATAAAACACTGAATCACCTTATATCGGGGTT...TCTTCGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGATTGGCTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCAGGAGAGACAGCTTTaGAGTACTTGTGGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSQERQL*STCGSR
Trigger: ACGACTACCACAAGTACTTCAAAGCTGTCTCTCCTG...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGCCATGCTGAGGGGTTaGAAAGCAGGGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFAMLRG*KAGLFI
Trigger: AATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATAATGTTATCATGAATTaGTTCTTGTTGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: VSVVPGITAITGLPSEVDNVIMN*FLLPWQ
Trigger: CTGCCATGGCAACAAGAAGCAATTCATGATAACATT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTATAATGAGAACCTGGTaGTTAGTAAACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLIMRTW*LVNSWF
Trigger: GAACCAAGAGTTTACTAAGCACCAGGTTCTCATTAT...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp AACATGAAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTTCCAGCTACTTTATCTaGACACCAGGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NMKPDFFNSMDMVTSPERSSYFI*TPGSQN
Trigger: GTTCTGGGACCCTGGTGTGCAGATAAAGTAGCTGGA...ACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTTCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACTCAACGCTTTCAAACTaGTGTCGCTCATATGGTTTA +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHSTLSN*CRSYGL
Trigger: TAAACCATATGAGCGACAGCAGTTTGAAAGCGTTGA...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARSSSQH*LKEALS
Trigger: GGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGGAAGGCGATAAAGTATaGTGGGGAGACAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVEGDKV*WGDKQL
Trigger: AAGCTGTTTGTCTCCCCAGCATACTTTATCGCCTTC...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGTATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGCCAATAGAAGGGCTCTaGTCAGAATCCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRPIEGL*SESILP
Trigger: GGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTATATTGACACCACCATaGGGCTGGGTAGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFILTPP*GWVVPS
Trigger: AGAAGGGACTACCCAGCCGCATGGTGGTGTCAATAT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTATATTGACACCACCATaGGGCTGGGTAGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSILTPP*GWVVPS
Trigger: AGAAGGGACTACCCAGCCGCATGGTGGTGTCAATAT...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAACTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQLYSQR*KDGVVD
Trigger: GTCAACAACACCATCTTTGCATCGCTGGCTGTAAAG...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCACCACAATCTCACATaGCTGAGAAGTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILHHNLT*LRSIPV
Trigger: GACAGGTATACTTCTCAGCCATGTGAGATTGTGGTG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACAGTATCAACCGACTTaGAACACTTGTTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQQYQPT*NTCFSR
Trigger: TCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTTCGTACACAGCTCATTaGTGGACCAACAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSSYTAH*WTNNGG
Trigger: GCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGA...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGCCAACTGGCATCAAATaGTCATCCAGTTCGCCAATT +
Preference number: 4 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRPTGIK*SSSSPI
Trigger: AATTGGCGAACTGGATGACCATTTGATGCCAGTTGG...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFGTWSS*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCTCTGGAATTGCTTTTaGGTAGCACTGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILLWNCF*VALPSF
Trigger: AAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAATTCCAAAGCATCTTGTaGTATCTTCAGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQFQSIL*YLQEDR
Trigger: TCTATCCTCCTGAAGATACCACAAGATGCTTTGGAA...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGTGGAATCTGAGGTATaGGTTTGGCCGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARVESEV*VWPSVF
Trigger: GAATACTGACGGCCAAACCCATACCTCAGATTCCAC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACGTACACAGGAAAGTGTaGAATCTGAGGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: EILPSRAQGLFPISPFNYVHRKV*NLRYGF
Trigger: AAACCCATACCTCAGATTCCACACTTTCCTGTGTAC...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAAGGAAATTTACTGAGTaGGGTAAGATCAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQRKFTE*GKISVH
Trigger: GTGTACACTGATCTTACCCCACTCAGTAAATTTCCT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAGGCGATAAAGTATGCTaGGGAGACAAACAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPGDKVC*GDKQLF
Trigger: GAAAAGCTGTTTGTCTCCCCAGCATACTTTATCGCC...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGAGTACATTCATCGCTaGGCTGGGGCTGGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIEYIHR*AGAGSR
Trigger: ACGAGAACCAGCCCCAGCCCAGCGATGAATGTACTC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATACCCTCTCCCCACAGCTaGTTAAATAGCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIPSPHS*LNSSPA
Trigger: TGCTGGGCTGCTATTTAACCAGCTGTGGGGAGAGGG...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATACAACTACTGCAGGACTaGCACTACTGCACACACGGA +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIQLLQD*HYCTHG
Trigger: TCCGTGTGTGCAGTAGTGCCAGTCCTGCAGTAGTTG...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCACAGCTGACACTTGTTaGGCAACCTGGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFTADTC*ATWFAE
Trigger: CTCTGCAAACCAGGTTGCTCAACAAGTGTCAGCTGT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACGATCTGAATGAGTTCTaGCAGCTGACACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYDLNEF*QLTLVE
Trigger: CTCAACAAGTGTCAGCTGTCAGAACTCATTCAGATC...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAACAATCTCACATGGCTaGGAAGTATACCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPTISHG*EVYLSK
Trigger: CTTAGACAGGTATACTTCTCAGCCATGTGAGATTGT...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGGAGGCTCGAAGAGGTaGGTTAATTGGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSGGSKR*VNWQIK
Trigger: CTTTATCTGCCAATTAACTCACCTCTTCGAGCCTCC...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQVSHSK*ELQLFQ
Trigger: CTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAAC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGTTCTATTAGCACCTTaGTGTGCAGCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARVLLAP*CAAFSG
Trigger: CCCTGAAAATGCTGCACATCAAGGTGCTAATAGAAC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGAACAGAGGAAAAGCTaGGCAGCCCTCTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYEQRKS*AALSPQ
Trigger: CTGTGGGGAGAGGGCTGCTCAGCTTTTCCTCTGTTC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAAATGTTATCATGAATTaGTTCTTGTTGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQNVIMN*FLLPWQ
Trigger: CTGCCATGGCAACAAGAAGCAATTCATGATAACATT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAACAGTTAGTCCCAAAATaGGAGGACATGATGGACAAT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQQLVPK*EDMMDN
Trigger: ATTGTCCATCATGTCCTCGCATTTTGGGACTAACTG...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGACCACCAGGTCAGTTaGAGTTTCAGCATTACTCTT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARDHQVS*SFSITL
Trigger: AAGAGTAATGCTGAAACTGCAACTGACCTGGTGGTC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AACATGAAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGAGGCAGGTGAGAAGTaGTCTTCACATAGTGCATGT +
Preference number: 4 (lower is better)
Translates to: NMKPDFFNSMDMVTSPEREAGEK*SSHSAC
Trigger: ACATGCACTATGTGAAGAGCACTTCTCACCTGCCTC...ACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACAAACACTCTGGAATTaGTTTTGGGTAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARQTLWN*FWVALP
Trigger: AGGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTG...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGCAAACACTCTGGAATTaGTTTTGGGTAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMQTLWN*FWVALP
Trigger: AGGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTG...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTCCTCTTCTCAGCACTaGTTAAAGGAAGCGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFSSSQH*LKEALS
Trigger: GGAAAGCGCTTCCTTTAAGCAGTGCTGAGAAGAGGA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAAGTATCTGTTTATTCTaGAGACTTTCCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQSICLF*RLSHLA
Trigger: AGCCAAATGGGAAAGTCTGCAGAATAAACAGATACT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGAAGGCGATAAAGTATaGTGGGGAGACAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPAREGDKV*WGDKQL
Trigger: AAGCTGTTTGTCTCCCCAGCATACTTTATCGCCTTC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGAAGGCGATAAAGTATaGTGGGGAGACAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSEGDKV*WGDKQL
Trigger: AAGCTGTTTGTCTCCCCAGCATACTTTATCGCCTTC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGCTTTACAGCCAGCGATaGAAAGATGGTGTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGLYSQR*KDGVVD
Trigger: GTCAACAACACCATCTTTGCATCGCTGGCTGTAAAG...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGCATGCCCAAGCTTCTaGTCTCAAAATGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARACPSF*SQNADS
Trigger: AGAATCAGCATTTTGAGAGCAGAAGCTTGGGCATGC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGGATATAAGCCAGCTCTaGATCTTGTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGDISQL*ILFASF
Trigger: GAAGCTGGCAAACAAGATCCAGAGCTGGCTTATATC...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGAGTCTCTTTCCCAACTaGCATCAAATGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGSLFPN*HQMVIQ
Trigger: CTGGATGACCATTTGATGCCAGTTGGGAAAGAGACT...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGTCTTCCTGGAACACTaGTCTCTTCTTCATCATGCA +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSVFLEH*SLLHHA
Trigger: TGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGAC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTGGAACCTGGTCTTCCTaGAACACTGGTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VARVFPACSNLADFLGKSGTWSS*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTCCAGGAAGACCAGGTTCC...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGTCGTTTCGTGGAACCTaGTCTTCCTGGAACACTGGT +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRSFRGT*SSWNTG
Trigger: ACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGA...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTTCGTTTCGTGGAACCTaGTCTTCCTGGAACACTGGT +
Preference number: 4 (lower is better)
Translates to: LGGIFKQPYSESFNTEERSFRGT*SSWNTG
Trigger: ACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGA...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTCGTTTCGTGGAACCTaGTCTTCCTGGAACACTGGT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSFRGT*SSWNTG
Trigger: ACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCAGGGCTGATCAGGTCTaGGATAACTATCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLRADQV*DNYPSN
Trigger: GTTTGAGGGATAGTTATCCCAGACCTGATCAGCCCT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGGTGGAATCTGAGGTATaGGTTTGGCCGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: SISIKVFITQESTFIAGLVESEV*VWPSVF
Trigger: GAATACTGACGGCCAAACCCATACCTCAGATTCCAC...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGTACACAGGAAAGTGTaGAATCTGAGGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQVHRKV*NLRYGF
Trigger: AAACCCATACCTCAGATTCCACACTTTCCTGTGTAC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AACATGAAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTACATCCAGCAGTGGCTaGTTGAGATTGGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: NMKPDFFNSMDMVTSPERTSSSG*LRLVRS
Trigger: TGACCTAACCAATCTCAACCAGCCACTGCTGGATGT...ACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGCATCGCTGGCAGTCTaGGCTCTTAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYASLAV*ALSSSA
Trigger: TGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGASRKK*TAFPCQ
Trigger: TTGACACGGGAAAGCAGTCCATTTCTTACGACTTGC...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCACTATCCATGTAAATaGCACCAGCAAGCGACTCAA +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSHYPCK*HQQATQ
Trigger: TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTTAGTGGCCGCATCATaGGATAGTACACCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFLVAAS*DSTPAR
Trigger: TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCTCAGTGGGAACTACCTaGCAGGAGGACTTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSSVGTT*QEDFSK
Trigger: TTTACTAAAGTCCTCCTGCCAGGTAGTTCCCACTGA...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATACCCAGAAATGAAGTCTaGTCGTGGGCTCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIPRNEV*SWAPYQ
Trigger: CTGGTAAGGAGCCCACGACCAGACTTCATTTCTGGG...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR CAA 72 bp CTTGAAGATGTGTGGTCCACATCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGGTTGTACTTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LEDVWSTSSSGW*RLVRSRLYFVL
Trigger: TAAAACAAAGTACAACCTTGACCTAACCAATCTCAACCAGCCACTGCTGGATGTGGACCACACATCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
3UTR CAA 72 bp GGAACCAGTATCTGTTTATTCTGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCACTGCTTAAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GTSICLFCRLSH*AFLFSALLKGS
Trigger: GCTTCCTTTAAGCAGTGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGAAAGGACCCATTGGTaGGGAAGCAGGGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNERTHW*GSRGHE
Trigger: CTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTC...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGACAGCTGACACTTGTTaGGCAACCTGGTTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRTADTC*ATWFAE
Trigger: CTCTGCAAACCAGGTTGCTCAACAAGTGTCAGCTGT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCATGAGTTCTGACAGCTaGCACTTGTTGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFMSSDS*HLLSNL
Trigger: CAGGTTGCTCAACAAGTGTCAGCTGTCAGAACTCAT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCACCTTGAGATCTGAATaGGTTCTGACAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLTLRSE*VLTADT
Trigger: AGTGTCAGCTGTCAGAACTCATTCAGATCTCAAGGT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACAAAATGCGAGGACATaGTGGACAATTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARQNART*WTIFTE
Trigger: CTCTGTGAAAATTGTCCATCATGTCCTCGCATTTTG...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTGTTTGTTGCGAGGCTaGTTCTTCCCAATGCCATGT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFCLLRG*FFPMPC
Trigger: ACATGGCATTGGGAAGAATCAGCCTCGCAACAAACA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGTTCTATTAGCACCTTaGTGTGCAGCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLVLLAP*CAAFSG
Trigger: CCCTGAAAATGCTGCACATCAAGGTGCTAATAGAAC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFCCKIC*NFNVEL
Trigger: AAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLCCKIC*NFNVEL
Trigger: AAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCA...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGGGGCCAAGAGTCCTTaGGGAGTACCCAATAGAAGG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNGAKSP*GVPNRR
Trigger: CCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCC...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTCCATCACTAGCGTTTaGCAGAGTCAAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSITSV*QSQSLK
Trigger: CTTCAGGCTTTGACTCTGTCAAACGCTAGTGATGGA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGGGGGATCAAATATTaGCACCACCATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNRGIKY*HHHAAG
Trigger: CCCAGCCGCATGGTGGTGTCAATATTTGATCCCCCT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAAAAGGTGCTTGGTTATaGGGTAGTCCAAAATCGCAT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARKGAWL*GSPKSH
Trigger: ATGCGATTTTGGACTACCTCATAACCAAGCACCTTT...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAAAGGTGCTTGGTTATaGGGTAGTCCAAAATCGCAT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSKGAWL*GSPKSH
Trigger: ATGCGATTTTGGACTACCTCATAACCAAGCACCTTT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAGCACAAAGTCATCAATaGCATGGAAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIAQSHQ*HGRAQE
Trigger: CTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGC...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTGCACAAAGTCATCAATaGCATGGAAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFAQSHQ*HGRAQE
Trigger: CTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGC...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILSFFSS*NCTKSS
Trigger: TGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGA...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTCATTTTCCCAGAAATaGAGTCTGGTCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRSFSQK*SLVVGS
Trigger: GGAGCCCACGACCAGACTTCATTTCTGGGAAAATGA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTACAAGGCCAACACGATaGGATCAACACAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFTRPTR*DQHKVS
Trigger: TGAGACTTTGTGTTGATCTCATCGTGTTGGCCTTGT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCCCGCCCCATCCCTTaGATATTAAGCATGAACACT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPRPIP*ILSMNT
Trigger: AGTGTTCATGCTTAATATTCAAGGGATGGGGCGGGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTCCAGCTACTTTATCTaGACACCAGGGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRSSYFI*TPGSQN
Trigger: GTTCTGGGACCCTGGTGTGCAGATAAAGTAGCTGGA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTCAACGCTTTCAAACTaGTGTCGCTCATATGGTTTA +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILSTLSN*CRSYGL
Trigger: TAAACCATATGAGCGACAGCAGTTTGAAAGCGTTGA...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGCTCTGGATCTTGTTTaGCAGCTTCCTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSALDLV*QLPLSI
Trigger: GATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTAGAGATGGGTGCCCTTaGTCTTCCTTTAGATTGAAC +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSRDGCP*SSFRLN
Trigger: GTTCAATCTAAAGGAAGAGCAAGGGCACCCATCTCT...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCATAATTAGAGATGGGTaGCCTTGCTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILIIRDG*PCSSFR
Trigger: TCTAAAGGAAGAGCAAGGGCACCCATCTCTAATTAT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGTCTCTTCTTCATCATaGAAATCAAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQVSSSS*KSSSSS
Trigger: TGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGAC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGCAAACACTCTGGAATTaGTTTTGGGTAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SISIKVFITQESTFIAGLQTLWN*FWVALP
Trigger: AGGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTG...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTACTTTGTACTGGGAATaGCTATGCGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFTLYWE*LCELQT
Trigger: AGTCTGAAGCTCGCATAGGCATTCCCAGTACAAAGT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACCAGTATCTGTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCAACTTTGTACTGGGAATaGCTATGCGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TSICLFCRLSHLAFLFSATLYWE*LCELQT
Trigger: AGTCTGAAGCTCGCATAGGCATTCCCAGTACAAAGT...TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGAAGGCGATAAAGTATaGTGGGGAGACAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFEGDKV*WGDKQL
Trigger: AAGCTGTTTGTCTCCCCAGCATACTTTATCGCCTTC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCTATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGTATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTGGGAATGCCTATGCGAGCTTCAGACTTCTCAATATCTTCCATGAATTTAAAATATTGACACCACCATaGGGCTGGGTAGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGNAYASFRLLNIFHEFKILTPP*GWVVPS
Trigger: AGAAGGGACTACCCAGCCGCATGGTGGTGTCAATAT...TTTAAATTCATGGAAGATATTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTAATCCTCATCCAGTTTaGCATTCGCCAGCATGCAGT +
Preference number: 4 (lower is better)
Translates to: VARVFPACSNLADFLGKSNPHPV*HSPACS
Trigger: ACTGCATGCTGGCGAATGGCAAACTGGATGAGGATT...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGCATGCCCAAGCTTCTaGTCTCAAAATGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFACPSF*SQNADS
Trigger: AGAATCAGCATTTTGAGAGCAGAAGCTTGGGCATGC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGCAGTATCAACCGACTTaGAACACTTGTTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVQYQPT*NTCFSR
Trigger: TCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTG...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATTGGTGGACCAACAATaGAGGCTCGAAGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRILVDQQ*RLEEVS
Trigger: ACTCACCTCTTCGAGCCTCCATTGTTGGTCCACCAA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACACAGCTCATTGGTaGACCAACAATGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIYTAHW*TNNGGS
Trigger: CGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATCGTACACAGCTCATTaGTGGACCAACAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRISYTAH*WTNNGG
Trigger: GCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATCGTTTCGTGGAACCTaGTCTTCCTGGAACACTGGT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRISFRGT*SSWNTG
Trigger: ACCAGTGTTCCAGGAAGACCAGGTTCCACGAAACGA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGACTGCCTTCGTTTCGTaGAACCTGGTCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRTAFVS*NLVFLE
Trigger: TTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTAGGGCTGATCAGGTCTaGGATAACTATCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VARVFPACSNLADFLGKSRADQV*DNYPSN
Trigger: GTTTGAGGGATAGTTATCCCAGACCTGATCAGCCCT...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTCTGAGGTATGGGTTTaGCCGTCAGTATTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSEVWV*PSVFQS
Trigger: GCTTTGGAATACTGACGGCCAAACCCATACCTCAGA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCGTGGAATCTGAGGTATaGGTTTGGCCGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFVESEV*VWPSVF
Trigger: GAATACTGACGGCCAAACCCATACCTCAGATTCCAC...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGTTGTATACTTTGTACTaGGAATGCCTATGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLLYTLY*ECLCEL
Trigger: AAGCTCGCATAGGCATTCCCAGTACAAAGTATACAA...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCAAGGAAATTTACTGAGTaGGGTAAGATCAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPRKFTE*GKISVH
Trigger: GTGTACACTGATCTTACCCCACTCAGTAAATTTCCT...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTTTCAGCCAATCGTACACAGCTCATTGGTGGACCAACAATGGAGGCTCGAAGATATAGCACAGAGTTCTaGAACCAGTATCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: LSANRTQLIGGPTMEARRYSTEF*NQYLFI
Trigger: AATAAACAGATACTGGTTCCAGAACTCTGTGCTATA...TCTTCGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGATTGGCTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAATCATAACTGCCATTaGCGAGATTTTGATTGTAAG +
Preference number: 4 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHNHNCH*RDFDCK
Trigger: CTTACAATCAAAATCTCGCCAATGGCAGTTATGATT...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGCAAGTCGTAAGAAATaGACTGCTTTCCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFASRKK*TAFPCQ
Trigger: TTGACACGGGAAAGCAGTCCATTTCTTACGACTTGC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILERFFC*LLKFSR
Trigger: TCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTC...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGCACACACGGAGAGATaGAGAAGAATCTACATCATC +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLAHTER*RRIYII
Trigger: GATGATGTAGATTCTTCTCCATCTCTCCGTGTGTGC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTCAAAATGCGAGGACATaGTGGACAATTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFQNART*WTIFTE
Trigger: CTCTGTGAAAATTGTCCATCATGTCCTCGCATTTTG...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATGTTTGTTGCGAGGCTaGTTCTTCCCAATGCCATGT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRICLLRG*FFPMPC
Trigger: ACATGGCATTGGGAAGAATCAGCCTCGCAACAAACA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATTTGTAGAGACAACATaGAACCAGACTTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQFVETT*NQTSST
Trigger: AGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCCAGCAGTGGCTGGTTaGGATTGGTTAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNPAVAG*DWLGQG
Trigger: ACCTTGACCTAACCAATCTCAACCAGCCACTGCTGG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGCCAGCAGTGGCTGGTTaGGATTGGTTAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWPAVAG*DWLGQG
Trigger: ACCTTGACCTAACCAATCTCAACCAGCCACTGCTGG...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFCCKIC*NFNVEL
Trigger: AAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATATGCTGTAAGATCTGCTaGAACTTCAACGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQICCKIC*NFNVEL
Trigger: AAGCTCCACGTTGAAGTTTCAGCAGATCTTACAGCA...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCATTCTGAATGGAATATaGGGTAGTTGGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFILNGI*GSWLHG
Trigger: CCCGTGCAACCAACTACCTCATATTCCATTCAGAAT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: KWHQQATQKYPPWPLELQNLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAATACAGAAGAGCGTaGACTGGCCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQYRRA*TGHRSS
Trigger: GCTGCTTCTGTGGCCAGTTCACGCTCTTCTGTATTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSSFFSS*NCTKSS
Trigger: TGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGA...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACCAGTATCTGTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCACAGTTAGTCCCAAAATaGGAGGACATGATGGACAAT +
Preference number: 4 (lower is better)
Translates to: TSICLFCRLSHLAFLFSAQLVPK*EDMMDN
Trigger: ATTGTCCATCATGTCCTCGCATTTTGGGACTAACTG...TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGAGGCAGGTGAGAAGTaGTCTTCACATAGTGCATGT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLREAGEK*SSHSAC
Trigger: ACATGCACTATGTGAAGAGCACTTCTCACCTGCCTC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTACAATACTTGTTaGAATAAGCAGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILFYNTC*NKQVGL
Trigger: GAGACCAACCTGCTTATTGCAACAAGTATTGTAGAA...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAACGAACCACCAAGTTaGATTTTGGTATATCAACAC +
Preference number: 4 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILNEPPS*ILVYQH
Trigger: GTGTTGATATACCAAAATGCAACTTGGTGGTTCGTT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGTCTCTTCTTCATCATaGAAATCAAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSVSSSS*KSSSSS
Trigger: TGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGAC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCACTTTGTACTGGGAATaGCTATGCGAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFTLYWE*LCELQT
Trigger: AGTCTGAAGCTCGCATAGGCATTCCCAGTACAAAGT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCCAATAGAAGGGCTCTaGTCAGAATCCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYPIEGL*SESILP
Trigger: GGGCAGGATGGATTCTGAGCAGAGCCCTTCTATTGG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCCACACAGTCCGCTATaGTTTTGTCAGCAATACACT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFPHSPL*FCQQYT
Trigger: AGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCACTTACATATAAATaGAGCATTCCACGAAGCATC +
Preference number: 4 (lower is better)
Translates to: GITAITGLPSEVDLLAFPSLTYK*SIPRSI
Trigger: GATGCTTCGTGGAATGCTGCATTTATATGTAAGTGA...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675540.1
CDS-3UTR CCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGTGTTTAAACAGACGATaGTATTATGATCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLCLNRR*YYDPEL
Trigger: CAGCTCTGGATCATAATACCATCGTCTGTTTAAACA...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGTGTTTAAACAGACGATaGTATTATGATCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRCLNRR*YYDPEL
Trigger: CAGCTCTGGATCATAATACCATCGTCTGTTTAAACA...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAACTTCTGTCAGTAAATaGTCCACAATCCACCACAAT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARTSVSK*STIHHN
Trigger: ATTGTGGTGGATTGTGGACCATTTACTGACAGAAGT...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCCTCAACACATATGGTaGGAAAACGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLPQHIW*ENVIII
Trigger: GATGATGATGACGTTTTCCCACCATATGTGTTGAGG...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGTTGATTGTGACTCGTaGACCACCATCGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYVDCDS*TTIVRP
Trigger: AGGCCTGACGATGGTGGTCCACGAGTCACAATCAAC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCCCAACTGGCATCAAATaGTCATCCAGTTCGCCAATT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFPTGIK*SSSSPI
Trigger: AATTGGCGAACTGGATGACCATTTGATGCCAGTTGG...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAGTCTCTTTCCCAACTaGCATCAAATGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSLFPN*HQMVIQ
Trigger: CTGGATGACCATTTGATGCCAGTTGGGAAAGAGACT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCCTCTGGAATTGCTTTTaGGTAGCACTGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFLWNCF*VALPSF
Trigger: AAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAG...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGGGCTGATCAGGTCTaGGATAACTATCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRRADQV*DNYPSN
Trigger: GTTTGAGGGATAGTTATCCCAGACCTGATCAGCCCT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTCTGAGGTATGGGTTTaGCCGTCAGTATTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRSEVWV*PSVFQS
Trigger: GCTTTGGAATACTGACGGCCAAACCCATACCTCAGA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTTTGTATACTTTGTACTaGGAATGCCTATGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSLYTLY*ECLCEL
Trigger: AAGCTCGCATAGGCATTCCCAGTACAAAGTATACAA...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGACATCCAGCAGTGGCTaGTTGAGATTGGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRTSSSG*LRLVRS
Trigger: TGACCTAACCAATCTCAACCAGCCACTGCTGGATGT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTGGCGATAAAGTATGCTaGGGAGACAAACAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFGDKVC*GDKQLF
Trigger: GAAAAGCTGTTTGTCTCCCCAGCATACTTTATCGCC...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCCACTATCCATGTAAATaGCACCAGCAAGCGACTCAA +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFHYPCK*HQQATQ
Trigger: TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTG...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAACACTATCCATGTAAATaGCACCAGCAAGCGACTCAA +
Preference number: 4 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKHYPCK*HQQATQ
Trigger: TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTG...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp ATCCTCCTCAGATCTCCTAAGCTCAGAATCCATTCCTaGCATTTCATTCTTCTCAAGCTGAAACTGCACAAA +
Preference number: 4 (lower is better)
Translates to: ILLRSPKLRIHS*HFILLKLKLHK
Trigger: TTTGTGCAGTTTCAGCTTGAGAAGAATGAAATGCAAGGAATGGATTCTGAGCTTAGGAGATCTGAGGAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCCTGGTTTGCAGAGTTaGCCAAGAACACCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYPGLQS*PRTPSF
Trigger: AAAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTCTAGGATTGCAAGATaGCACTCATCAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFSRIAR*HSSNTK
Trigger: TTTGGTGTTTGATGAGTGTCATCTTGCAATCCTAGA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTCAGAATCACTCCATaGCACATAATTATCCTGATT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARLRITP*HIIILI
Trigger: AATCAGGATAATTATGTGTCATGGAGTGATTCTGAG...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCATTTAGGAGCTAGATaGGTAAACGGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFHLGAR*VNGSLG
Trigger: ACCAAGTGATCCGTTTACTCATCTAGCTCCTAAATG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTTTTGTAGAGACAACATaGAACCAGACTTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSFVETT*NQTSST
Trigger: AGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAA...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATTTGTAGAGACAACATaGAACCAGACTTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARFVETT*NQTSST
Trigger: AGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTGTTCTATTAGCACCTTaGTGTGCAGCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSVLLAP*CAAFSG
Trigger: CCCTGAAAATGCTGCACATCAAGGTGCTAATAGAAC...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCTGCCCTTGAGCACTTaGATAGTGTCTGTCGTACCA +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNLPLST*IVSVVP
Trigger: TGGTACGACAGACACTATTCAAGTGCTCAAGGGCAG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGACAGAGTCAAAGCCTaGAGAATAAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIDRVKA*RISPGL
Trigger: CAATCCTGGACTTATTCTTCAGGCTTTGACTCTGTC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACTTATCTGCATCTGGATaGTCAAACATACATCTTGGT +
Preference number: 4 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYLSASG*SNIHLG
Trigger: ACCAAGATGTATGTTTGATCATCCAGATGCAGATAA...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAACCCCGATATAAGGTaGTTCAGTGTTTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFNPDIR*FSVLSA
Trigger: TGCAGATAAAACACTGAATCACCTTATATCGGGGTT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTAAAGGTGCTTGGTTATaGGGTAGTCCAAAATCGCAT +
Preference number: 4 (lower is better)
Translates to: LGGIFKQPYSESFNTEERKGAWL*GSPKSH
Trigger: ATGCGATTTTGGACTACCTCATAACCAAGCACCTTT...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGATTATGATCCAGAGCTaGTTCAAGCAGTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRIMIQS*FKQFNL
Trigger: CAGGTTGAACTGCTTGAAGCAGCTCTGGATCATAAT...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAATTATGATCCAGAGCTaGTTCAAGCAGTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIIMIQS*FKQFNL
Trigger: CAGGTTGAACTGCTTGAAGCAGCTCTGGATCATAAT...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGACCACCAGGTCAGTTaGAGTTTCAGCATTACTCTT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRDHQVS*SFSITL
Trigger: AAGAGTAATGCTGAAACTGCAACTGACCTGGTGGTC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGTGCAGCTCCTCTTaGTCATGTTTGATGTATTTC +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFLCSSS*SCLMYF
Trigger: GAAATACATCAAACATGAGCAAGAGGAGCTGCACAG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAACTGTGCAGCTCCTCTTaGTCATGTTTGATGTATTTC +
Preference number: 4 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKLCSSS*SCLMYF
Trigger: GAAATACATCAAACATGAGCAAGAGGAGCTGCACAG...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTAGTATCTGTTTATTCTaGAGACTTTCCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSSICLF*RLSHLA
Trigger: AGCCAAATGGGAAAGTCTGCAGAATAAACAGATACT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGAGTATCTGTTTATTCTaGAGACTTTCCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMSICLF*RLSHLA
Trigger: AGCCAAATGGGAAAGTCTGCAGAATAAACAGATACT...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: SISIKVFITQESTFIAGLISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTATGAGGTAGTTGGTTaGACGGGTATTTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRYEVVG*TGISCL
Trigger: CAAGCAGGAAATACCCGTGCAACCAACTACCTCATA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTGCCATTCGCCAGCATaGAGTCTTTTGTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFCHSPA*SLLSFH
Trigger: ATGAAATGACAAAAGACTGCATGCTGGCGAATGGCA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGATCCAGATAGCACATTaGATCCCAAGAGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRIQIAH*IPRAVV
Trigger: GACTACAGCTCTTGGGATGCAATGTGCTATCTGGAT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCACACAGTCCGCTATaGTTTTGTCAGCAATACACT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPHSPL*FCQQYT
Trigger: AGTGTATTGCTGACAAAAGCATAGCGGACTGTGTGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGTCATAATGAGAACCTaGTGCTTAGTAAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFVIMRT*CLVNSW
Trigger: CCAAGAGTTTACTAAGCACCAGGTTCTCATTATGAC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGTCATAATGAGAACCTaGTGCTTAGTAAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLVIMRT*CLVNSW
Trigger: CCAAGAGTTTACTAAGCACCAGGTTCTCATTATGAC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTCACCACAATCTCACATaGCTGAGAAGTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSHHNLT*LRSIPV
Trigger: GACAGGTATACTTCTCAGCCATGTGAGATTGTGGTG...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTAGGATCGATATTCTGTaGGCAAATCAAAACGAACCA +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSRIDIL*ANQNEP
Trigger: TGGTTCGTTTTGATTTGCCCACAGAATATCGATCCT...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGTCTTCCTGGAACACTaGTCTCTTCTTCATCATGCA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRVFLEH*SLLHHA
Trigger: TGCATGATGAAGAAGAGACCAGTGTTCCAGGAAGAC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGTCTTGAAGATGTGTaGTCCACATCCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNSLEDV*STSSSG
Trigger: GCCACTGCTGGATGTGGACCACACATCTTCAAGACT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGGCGATAAAGTATGCTaGGGAGACAAACAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIGDKVC*GDKQLF
Trigger: GAAAAGCTGTTTGTCTCCCCAGCATACTTTATCGCC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTGGCGATAAAGTATGCTaGGGAGACAAACAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSGDKVC*GDKQLF
Trigger: GAAAAGCTGTTTGTCTCCCCAGCATACTTTATCGCC...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGAATCATAACTGCCATTaGCGAGATTTTGATTGTAAG +
Preference number: 4 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLNHNCH*RDFDCK
Trigger: CTTACAATCAAAATCTCGCCAATGGCAGTTATGATT...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAAGTCATCAATGACATaGAAGAGCTCAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFKSSMT*KSSGET
Trigger: TGTCTCTCCTGAGCTCTTCCATGTCATTGATGACTT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTAAGTCATCAATGACATaGAAGAGCTCAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: LGGIFKQPYSESFNTEERKSSMT*KSSGET
Trigger: TGTCTCTCCTGAGCTCTTCCATGTCATTGATGACTT...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGTTAGTGGCCGCATCATaGGATAGTACACCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWLVAAS*DSTPAR
Trigger: TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAA...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAGACGATGGTATTATaGTCCAGAGCTGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQTMVL*SRAASS
Trigger: GCTTGAAGCAGCTCTGGATCATAATACCATCGTCTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACATGAGTTCTGACAGCTaGCACTTGTTGAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYMSSDS*HLLSNL
Trigger: CAGGTTGCTCAACAAGTGTCAGCTGTCAGAACTCAT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTCTAGGATTGCAAGATaGCACTCATCAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFSRIAR*HSSNTK
Trigger: TTTGGTGTTTGATGAGTGTCATCTTGCAATCCTAGA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR TCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTCAAAATGCGAGGACATaGTGGACAATTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSQNART*WTIFTE
Trigger: CTCTGTGAAAATTGTCCATCATGTCCTCGCATTTTG...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGACAATCTCACATGGCTaGGAAGTATACCTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRTISHG*EVYLSK
Trigger: CTTAGACAGGTATACTTCTCAGCCATGTGAGATTGT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTGGCAGATAAAGAGTTaGATAAAATGTACCATCAGG +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFWQIKS*IKCTIR
Trigger: CCTGATGGTACATTTTATTCAACTCTTTATCTGCCA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGGAGGCTCGAAGAGGTaGGTTAATTGGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYGGSKR*VNWQIK
Trigger: CTTTATCTGCCAATTAACTCACCTCTTCGAGCCTCC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAACAGACATTTGGTCATaGTTTTCTAGAGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQITDIWS*FSREEV
Trigger: AACCTCCTCTCTAGAAAATCATGACCAAATGTCTGT...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCACAGGACTTCCATCTaGGGTAGATTTGTTAGCATT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRHRTSI*GRFVSI
Trigger: AATGCTAACAAATCTACCTCAGATGGAAGTCCTGTG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTCCATCACTAGCGTTTaGCAGAGTCAAAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYSITSV*QSQSLK
Trigger: CTTCAGGCTTTGACTCTGTCAAACGCTAGTGATGGA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACACCACAGTTTTCTTCTaGTGGATTCCAGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYTTVFF*WIPEPH
Trigger: GTGGGGTTCTGGAATCCATCAGAAGAAAACTGTGGT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTTATCTGCATCTGGATaGTCAAACATACATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFLSASG*SNIHLG
Trigger: ACCAAGATGTATGTTTGATCATCCAGATGCAGATAA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTTTATCTGCATCTGGATaGTCAAACATACATCTTGGT +
Preference number: 4 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSLSASG*SNIHLG
Trigger: ACCAAGATGTATGTTTGATCATCCAGATGCAGATAA...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATATCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: CLDLLHNQEEANSQGDQISFFSS*NCTKSS
Trigger: TGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGA...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAACCAAAAGCAGCACTaGATGGGCAAGAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRNQKQH*MGKRKI
Trigger: TATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAATTATGATCCAGAGCTaGTTCAAGCAGTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIIMIQS*FKQFNL
Trigger: CAGGTTGAACTGCTTGAAGCAGCTCTGGATCATAAT...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCTGTGCAGCTCCTCTTaGTCATGTTTGATGTATTTC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRLCSSS*SCLMYF
Trigger: GAAATACATCAAACATGAGCAAGAGGAGCTGCACAG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTGGGAATGCCTATGCGAGCTTCAGACTTCTCAATATCTTCCATGAATTTAAAGCTCTGGATCTTGTTTaGCAGCTTCCTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: TGNAYASFRLLNIFHEFKALDLV*QLPLSI
Trigger: GATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGC...TTTAAATTCATGGAAGATATTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGATAATTAGAGATGGGTaGCCTTGCTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRIIRDG*PCSSFR
Trigger: TCTAAAGGAAGAGCAAGGGCACCCATCTCTAATTAT...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAGTTCGCCAATTTTGTaGAGTTTCTCACAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSSPIL*SFSQQM
Trigger: CATTTGCTGTGAGAAACTGCACAAAATTGGCGAACT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR GCA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTTTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: KTFLLVAASWDSTPARLSFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTATGTGGTGATGGCATaGTTTAAAAAGGAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRYVVMA*FKKESP
Trigger: TGGCGACTCCTTTTTAAAGCATGCCATCACCACATA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCGTCATAATGAGAACCTaGTGCTTAGTAAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFVIMRT*CLVNSW
Trigger: CCAAGAGTTTACTAAGCACCAGGTTCTCATTATGAC...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCTCAACACATATGGTaGGAAAACGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPQHIW*ENVIII
Trigger: GATGATGATGACGTTTTCCCACCATATGTGTTGAGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGTGGAATCTGAGGTATaGGTTTGGCCGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNVESEV*VWPSVF
Trigger: GAATACTGACGGCCAAACCCATACCTCAGATTCCAC...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGTACACAGGAAAGTGTaGAATCTGAGGTATGGGTTT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRVHRKV*NLRYGF
Trigger: AAACCCATACCTCAGATTCCACACTTTCCTGTGTAC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAGGAAATTTACTGAGTaGGGTAAGATCAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFRKFTE*GKISVH
Trigger: GTGTACACTGATCTTACCCCACTCAGTAAATTTCCT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATATAGCACAGAGTTCTaGAACCAGTATCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: LQKTFLLVAASWDSTPARYSTEF*NQYLFI
Trigger: AATAAACAGATACTGGTTCCAGAACTCTGTGCTATA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LGGIFKQPYSESFNTEERERFFC*LLKFSR
Trigger: TCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTC...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp ACAGGATCAATGTCAGTCTCACCAGTATCAACCGACTaGGAACACTTGTTTCTCAAGATCTTTTCAATAGCT +
Preference number: 4 (lower is better)
Translates to: TGSMSVSPVSTD*EHLFLKIFSIA
Trigger: AGCTATTGAAAAGATCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGGTGAGACTGACATTGATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGATCTGAATGAGTTCTaGCAGCTGACACTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYDLNEF*QLTLVE
Trigger: CTCAACAAGTGTCAGCTGTCAGAACTCATTCAGATC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACACCTTGAGATCTGAATaGGTTCTGACAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNTLRSE*VLTADT
Trigger: AGTGTCAGCTGTCAGAACTCATTCAGATCTCAAGGT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCTCTTGCTCATGTTTaGTGTATTTCTGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPLAHV*CISVVL
Trigger: GAGAACTACAGAAATACATCAAACATGAGCAAGAGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCGTCATCATCATCCATaGCAGGATCAATGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYRHHHP*QDQCQS
Trigger: AGACTGACATTGATCCTGTCATGGATGATGATGACG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CTTGGTGGAATCTTCAAACAACCATATTCCGAGTCTTTCAATACAGAAGAGCGTTGGCAGATAAAGAGTTaGATAAAATGTACCATCAGG +
Preference number: 4 (lower is better)
Translates to: LGGIFKQPYSESFNTEERWQIKS*IKCTIR
Trigger: CCTGATGGTACATTTTATTCAACTCTTTATCTGCCA...ACGCTCTTCTGTATTGAAAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGTTCTATTAGCACCTTaGTGTGCAGCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNVLLAP*CAAFSG
Trigger: CCCTGAAAATGCTGCACATCAAGGTGCTAATAGAAC...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAACAGACATTTGGTCATaGTTTTCTAGAGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRITDIWS*FSREEV
Trigger: AACCTCCTCTCTAGAAAATCATGACCAAATGTCTGT...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATTCTGAATGGAATATaGGGTAGTTGGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNILNGI*GSWLHG
Trigger: CCCGTGCAACCAACTACCTCATATTCCATTCAGAAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKNLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGATAATGAGAACCTGGTaGTTAGTAAACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRIMRTW*LVNSWF
Trigger: GAACCAAGAGTTTACTAAGCACCAGGTTCTCATTAT...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTCAACGCTTTCAAACTaGTGTCGCTCATATGGTTTA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRSTLSN*CRSYGL
Trigger: TAAACCATATGAGCGACAGCAGTTTGAAAGCGTTGA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAGAGATGGGTGCCCTTaGTCTTCCTTTAGATTGAAC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYRDGCP*SSFRLN
Trigger: GTTCAATCTAAAGGAAGAGCAAGGGCACCCATCTCT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGATAATTAGAGATGGGTaGCCTTGCTCTTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRIIRDG*PCSSFR
Trigger: TCTAAAGGAAGAGCAAGGGCACCCATCTCTAATTAT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGTCTCTTCTTCATCATaGAAATCAAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRVSSSS*KSSSSS
Trigger: TGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGAC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAAACACTCTGGAATTaGTTTTGGGTAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQTLWN*FWVALP
Trigger: AGGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACTACTGGGAATGCCTATaGGAGCTTCAGACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNYWECL*ELQTSQ
Trigger: TTGAGAAGTCTGAAGCTCGCATAGGCATTCCCAGTA...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATTGAGATCTCTGTGTTaGTCTTGTCTGAACTGCATT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRILRSLC*SCLNCI
Trigger: AATGCAGTTCAGACAAGAGCAACACAGAGATCTCAA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCACCACAATCTCACATaGCTGAGAAGTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNHHNLT*LRSIPV
Trigger: GACAGGTATACTTCTCAGCCATGTGAGATTGTGGTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGATATAAGCCAGCTCTaGATCTTGTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYDISQL*ILFASF
Trigger: GAAGCTGGCAAACAAGATCCAGAGCTGGCTTATATC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGGATCGATATTCTGTaGGCAAATCAAAACGAACCA +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRRIDIL*ANQNEP
Trigger: TGGTTCGTTTTGATTTGCCCACAGAATATCGATCCT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGGCCTCAACACATATaGTGGGAAAACGTCATCATC +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNRPQHI*WENVII
Trigger: GATGATGACGTTTTCCCACCATATGTGTTGAGGCCT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCCAACTGGCATCAAATaGTCATCCAGTTCGCCAATT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYPTGIK*SSSSPI
Trigger: AATTGGCGAACTGGATGACCATTTGATGCCAGTTGG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAGTCTCTTTCCCAACTaGCATCAAATGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYSLFPN*HQMVIQ
Trigger: CTGGATGACCATTTGATGCCAGTTGGGAAAGAGACT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCTCTGGAATTGCTTTTaGGTAGCACTGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNLWNCF*VALPSF
Trigger: AAACGAAGGCAGTGCTACCCAAAAGCAATTCCAGAG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATTCCAAAGCATCTTGTaGTATCTTCAGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIFQSIL*YLQEDR
Trigger: TCTATCCTCCTGAAGATACCACAAGATGCTTTGGAA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATTGTATACTTTGTACTaGGAATGCCTATGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRILYTLY*ECLCEL
Trigger: AAGCTCGCATAGGCATTCCCAGTACAAAGTATACAA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAAAATTGCGATATCTTaGAATGATAACGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFKIAIS*NDNGIL
Trigger: CAAGATGCCGTTATCATTCCAAGATATCGCAATTTT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACCAGTATCTGTTTATTCTGCAGACTTTCCCATTTGGCTTTCCTCTTCTCAGCAAAAATTGCGATATCTTaGAATGATAACGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TSICLFCRLSHLAFLFSAKIAIS*NDNGIL
Trigger: CAAGATGCCGTTATCATTCCAAGATATCGCAATTTT...TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCAGAATAAACAGATACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGGAAATTTACTGAGTaGGGTAAGATCAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRRKFTE*GKISVH
Trigger: GTGTACACTGATCTTACCCCACTCAGTAAATTTCCT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCATTTAGGAGCTAGATaGGTAAACGGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYHLGAR*VNGSLG
Trigger: ACCAAGTGATCCGTTTACTCATCTAGCTCCTAAATG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGTTTCTCACAGCAAATaGGAGCTACAACTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYVSHSK*ELQLFQ
Trigger: CTGAAAGAGTTGTAGCTCTCATTTGCTGTGAGAAAC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRINLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTAATCTGATATGTTCCTaGTCATACTCCAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSNLICS*SYSRKS
Trigger: TGATTTCCTGGAGTATGATCAGGAACATATCAGATT...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAGTTAGTCCCAAAATaGGAGGACATGATGGACAAT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQLVPK*EDMMDN
Trigger: ATTGTCCATCATGTCCTCGCATTTTGGGACTAACTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGCTCTGGATCTTGTTTaGCAGCTTCCTTTATCAATC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYALDLV*QLPLSI
Trigger: GATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCAGGTTGGTCTCATGTaGTCGAAATTTCCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYQVGLM*SKFPKY
Trigger: GTACTTAGGAAATTTCGAGCACATGAGACCAACCTG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGTATCTGTTTATTCTaGAGACTTTCCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRSICLF*RLSHLA
Trigger: AGCCAAATGGGAAAGTCTGCAGAATAAACAGATACT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTGCCATTCGCCAGCATaGAGTCTTTTGTCATTTCAT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYCHSPA*SLLSFH
Trigger: ATGAAATGACAAAAGACTGCATGCTGGCGAATGGCA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTGTTTAAACAGACGATaGTATTATGATCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TKSKTKSSTEWARERYLRCLNRR*YYDPEL
Trigger: CAGCTCTGGATCATAATACCATCGTCTGTTTAAACA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGAAAATTGCGATATCTTaGAATGATAACGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRKIAIS*NDNGIL
Trigger: CAAGATGCCGTTATCATTCCAAGATATCGCAATTTT...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CCA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAAAAATTGCGATATCTTaGAATGATAACGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKKIAIS*NDNGIL
Trigger: CAAGATGCCGTTATCATTCCAAGATATCGCAATTTT...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
3UTR CAA 72 bp GTGTTTTATCTGCATCTGGATGATCAAACATACATCTaGGTGGAATCTTCAAACAACCATATTCCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VFYLHLDDQTYI*VESSNNHIPSL
Trigger: AAGACTCGGAATATGGTTGTTTGAAGATTCCACCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGTTCGCCAATTTTGTaGAGTTTCTCACAGCAAATG +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNSSPIL*SFSQQM
Trigger: CATTTGCTGTGAGAAACTGCACAAAATTGGCGAACT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp CTGGTCTCTTCTTCATCATGCAAATCAAGCTCCTCTTCATATTTAACAGTCTCTTTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: LVSSSSCKSSSSSYLTVSFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...AGAGACTGTTAAATATGAAGAGGAGCTTGATTTGCATGATGAAGAAGAGACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR GCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATTAGCACCTTGATGTaGAGCATTTTCAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNISTLM*SIFRDN
Trigger: ATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGTTGAGATCTCTGTGTTaGTCTTGTCTGAACTGCATT +
Preference number: 4 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWLRSLC*SCLNCI
Trigger: AATGCAGTTCAGACAAGAGCAACACAGAGATCTCAA...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACACTTCTGTCAGTAAATaGTCCACAATCCACCACAAT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYTSVSK*STIHHN
Trigger: ATTGTGGTGGATTGTGGACCATTTACTGACAGAAGT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCAGTATCAACCGACTTaGAACACTTGTTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYQYQPT*NTCFSR
Trigger: TCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGTTGTATACTTTGTACTaGGAATGCCTATGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWLYTLY*ECLCEL
Trigger: AAGCTCGCATAGGCATTCCCAGTACAAAGTATACAA...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CCA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAAATCATAACTGCCATTaGCGAGATTTTGATTGTAAG +
Preference number: 4 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRINHNCH*RDFDCK
Trigger: CTTACAATCAAAATCTCGCCAATGGCAGTTATGATT...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGAAAGGTTCTTTTGTTaGCTGTTGAAATTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNERFFC*LLKFSR
Trigger: TCGGGAGAATTTCAACAGCCAACAAAAGAACCTTTC...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCTCAGAATCACTCCATaGCACATAATTATCCTGATT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYLRITP*HIIILI
Trigger: AATCAGGATAATTATGTGTCATGGAGTGATTCTGAG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR TCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACTTTGTAGAGACAACATaGAACCAGACTTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNFVETT*NQTSST
Trigger: AGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAA...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAATGTTATCATGAATTaGTTCTTGTTGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYNVIMN*FLLPWQ
Trigger: CTGCCATGGCAACAAGAAGCAATTCATGATAACATT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACATAATGAGAACCTGGTaGTTAGTAAACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYIMRTW*LVNSWF
Trigger: GAACCAAGAGTTTACTAAGCACCAGGTTCTCATTAT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTTCTACAATACTTGTTaGAATAAGCAGGTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYFYNTC*NKQVGL
Trigger: GAGACCAACCTGCTTATTGCAACAAGTATTGTAGAA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACGAACCACCAAGTTaGATTTTGGTATATCAACAC +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYNEPPS*ILVYQH
Trigger: GTGTTGATATACCAAAATGCAACTTGGTGGTTCGTT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
3UTR CAA 72 bp TTCATCTTTTTCCCATTTATCTGTGTTGCTTTTGTCTaGATTTACTACATAACCAGGAGGAAGCCAATTCAC +
Preference number: 4 (lower is better)
Translates to: FIFFPFICVAFV*IYYITRRKPIH
Trigger: GTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAACACAGATAAATGGGAAAAAGATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTTTCAGGGACAATTGTaGTGTGCTTACAGTAATTAT +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYFQGQL*CAYSNY
Trigger: ATAATTACTGTAAGCACAGCACAATTGTCCCTGAAA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR GCA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCATGAACACTGTACATaGATAGATCACTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYHEHCT*IDHFYK
Trigger: CTTGTAAAAGTGATCTATGCATGTACAGTGTTCATG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CCA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACTATAGCACAGAGTTCTaGAACCAGTATCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNYSTEF*NQYLFI
Trigger: AATAAACAGATACTGGTTCCAGAACTCTGTGCTATA...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS TCA 90 bp AATTGCTTCTTGTTGCCATGGCAGTCCAAAGAAAGGACCCATTGGTaGGGAAGCAGGGGTCATGAGCTGCAGGCCTGCCATGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: NCFLLPWQSKERTHW*GSRGHELQACHAEG
Trigger: CCCCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTGGACTGCCATGGCAACAAGAAGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000529206.1
ENST00000529720.1
ENST00000531162.6
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCAGGGGTGGTCTAGGATaGCAAGATGACACTCATCAA +
Preference number: 5 (lower is better)
Translates to: RSPPHQALLLLILLLVILRGGLG*QDDTHQ
Trigger: TTGATGAGTGTCATCTTGCAATCCTAGACCACCCCT...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: RSPPHQALLLLILLLVILQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPSSSGW*RLVRSR
Trigger: CCTTGACCTAACCAATCTCAACCAGCCACTGCTGGA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCATAGAATAAGTCCAGGATaGGGGCCAAGAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: EPSTSGSPPPHPPPRNPHRISPG*GPRVLE
Trigger: CTCAAGGACTCTTGGCCCCAATCCTGGACTTATTCT...ATGAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCTTCCGCCTTCTAAAGTaGAGTTCATCAGGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: RSPPHQALLLLILLLVILFRLLK*SSSGKG
Trigger: ACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAA...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACATGCCATGCTGAGGGGTaGCAAAGCAGGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LLVAASWDSTPARLSPVTCHAEG*QSRAFH
Trigger: ATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGCA...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTCAAACACTCTGGAATaGCTTTTGGGTAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPSNTLE*LLGSTA
Trigger: GGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGCCAGCATCGCTGGCAGTCTGGGCTCTTAGCTCCTCTGCAGTCAAAAGGCAGTGTATTCCAAAGCATCTaGTGGTATCTTCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: RQHRWQSGLLAPLQSKGSVFQSI*WYLQED
Trigger: ATCCTCCTGAAGATACCACAAGATGCTTTGGAATAC...ACTGCCTTTTGACTGCAGAGGAGCTAAGAGCCCAGACTGCCAGCGATGCTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCTGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPCRLSH*AFLFSA
Trigger: TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCA...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGGAGCCCTCCACATCAGGCTCTCCTCCTCCTCATCCTCCTCCTCGTAATCCTCCCTAAGGAGGATTTTTaGGGCATTTTCCATTCATAT +
Preference number: 5 (lower is better)
Translates to: RSPPHQALLLLILLLVILPKEDF*GIFHSY
Trigger: ATATGAATGGAAAATGCCCAAAAAATCCTCCTTAGG...GAGGATTACGAGGAGGAGGATGAGGAGGAGGAGAGCCTGATGTGGAGGGCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GAAATTCTCCCGAGTAGGGCACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACGATGCAAAGATGGTGTaGTTGACCAGGGCAGACCGC +
Preference number: 5 (lower is better)
Translates to: EILPSRAQGLFPISPFNYDAKMV*LTRADR
Trigger: GCGGTCTGCCCTGGTCAACAACACCATCTTTGCATC...GTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTGCCCTACTCGGGAGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAACCTGGTTTGCAGAGTaGACCAAGAACACCGTCCTT +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQTWFAE*TKNTVL
Trigger: AAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGGT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CTTTCAGCCAATCGTACACAGCTCATTGGTGGACCAACAATGGAGGCTCGAAGAATCGTACACAGCTCATaGGTGGACCAACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: LSANRTQLIGGPTMEARRIVHSS*VDQQWR
Trigger: CCTCCATTGTTGGTCCACCAATGAGCTGTGTACGAT...TCTTCGAGCCTCCATTGTTGGTCCACCAATGAGCTGTGTACGATTGGCTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAAGAATAAGTCCAGGATaGGGGCCAAGAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQRISPG*GPRVLE
Trigger: CTCAAGGACTCTTGGCCCCAATCCTGGACTTATTCT...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CACAGGGCCTTTTCCCGATCAGTCCTTTTAATTACCGGGAGCACCTTCAGCCCCCGATACAGATTACAGTaGCTGACCTTTTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: HRAFSRSVLLITGSTFSPRYRLQ*LTFLLL
Trigger: GAGAAGCAAAAAGGTCAGCAACTGTAATCTGTATCG...GGGGCTGAAGGTGCTCCCGGTAATTAAAAGGACTGATCGGGAAAAGGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GTGTCCAATGGCCGTGTTGATTGTGACTCGTGGACCACCATCGTCAGGCCTCAACCAGCATGCAGTCTTTaGTCATTTCATCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VSNGRVDCDSWTTIVRPQPACSL*SFHLFP
Trigger: GGGAAAAAGATGAAATGACAAAAGACTGCATGCTGG...TTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGCAAAGATGGTGTTGTaGACCAGGGCAGACCGCAGG +
Preference number: 5 (lower is better)
Translates to: LQKTFLLVAASWDSTPARAKMVL*TRADRR
Trigger: CCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS TCA 90 bp CACAGCTTACCTTCAAACAGAGGGTCAGGGATTCAAATATCTGTGTaGAAGCCTACCACTGGCTTTACTGTCAGCAGGATTTCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: HSLPSNRGSGIQISV*KPTTGFTVSRISSP
Trigger: GGGCGAGGAAATCCTGCTGACAGTAAAGCCAGTGGTAGGCTTTCACACAGATATTTGAATCCCTGACCCTCTGTTTGAAGGTAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674628.1
CDS-3UTR CAA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATGCCATGCTGAGGGGTaGCAAAGCAGGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: GITAITGLPSEVDLLAFPCHAEG*QSRAFH
Trigger: ATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGCA...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAATGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQCRLSH*AFLFSA
Trigger: TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCA...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCAGGGGGATCAAATATaGACACCACCATGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: KTFLLVAASWDSTPARLSQGDQI*TPPCGW
Trigger: CCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAAGATCCAGATAGCACATaGCATCCCAAGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQDPDST*HPKSCS
Trigger: ACTACAGCTCTTGGGATGCAATGTGCTATCTGGATC...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: TAQCASRKKWTAFPCQHHQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...GTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTATCATGAATTGCTTCTaGTTGCCATGGCAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLIMNCF*LPWQSK
Trigger: TTTGGACTGCCATGGCAACAAGAAGCAATTCATGAT...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCACCTGGTTTGCAGAGTaGACCAAGAACACCGTCCTT +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILTWFAE*TKNTVL
Trigger: AAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGGT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGATCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LQKTFLLVAASWDSTPARSSSGW*RLVRSR
Trigger: CCTTGACCTAACCAATCTCAACCAGCCACTGCTGGA...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACC +
Preference number: 5 (lower is better)
Translates to: KTFLLVAASWDSTPARLSPALEH*NSVCRT
Trigger: GGTACGACAGACACTATTCAAGTGCTCAAGGGCAGG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATCGATACAGATTACAGTaGCTGACCTTTTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSVVPGITAITGLPSEVDRYRLQ*LTFLLL
Trigger: GAGAAGCAAAAAGGTCAGCAACTGTAATCTGTATCG...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AACATGAAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTCAGGGGGATCAAATATaGACACCACCATGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: NMKPDFFNSMDMVTSPERQGDQI*TPPCGW
Trigger: CCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTG...ACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTTCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGGCAAAGATGGTGTTGTaGACCAGGGCAGACCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRAKMVL*TRADRR
Trigger: CCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGC...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAGCAAAGATGGTGTTGTaGACCAGGGCAGACCGCAGG +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKAKMVL*TRADRR
Trigger: CCTGCGGTCTGCCCTGGTCAACAACACCATCTTTGC...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGATGCAAAGATGGTGTaGTTGACCAGGGCAGACCGC +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLDAKMV*LTRADR
Trigger: GCGGTCTGCCCTGGTCAACAACACCATCTTTGCATC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGATGCAAAGATGGTGTaGTTGACCAGGGCAGACCGC +
Preference number: 5 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSDAKMV*LTRADR
Trigger: GCGGTCTGCCCTGGTCAACAACACCATCTTTGCATC...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATATCTCTGTGTTGCTCTaGTCTGAACTGCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: VSVVPGITAITGLPSEVDISVLL*SELHFD
Trigger: GTCAAAATGCAGTTCAGACAAGAGCAACACAGAGAT...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAGGTTCCATCTCTCTTTaGTCCAAGATGCATTTACTT +
Preference number: 5 (lower is better)
Translates to: LLVAASWDSTPARLSPVTGSISL*SKMHLL
Trigger: AAGTAAATGCATCTTGGACAAAAGAGAGATGGAACC...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATGTGCTTAGTAAACTCTaGGTTCCATCTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: VSVVPGITAITGLPSEVDVLSKL*VPSLFC
Trigger: ACAAAAGAGAGATGGAACCAAGAGTTTACTAAGCAC...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGGGGTGGTCTAGGATaGCAAGATGACACTCATCAA +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQRGGLG*QDDTHQ
Trigger: TTGATGAGTGTCATCTTGCAATCCTAGACCACCCCT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAGACCACCAGGTCAGTaGCAGTTTCAGCATTACTCT +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILRPPGQ*QFQHYS
Trigger: AGAGTAATGCTGAAACTGCAACTGACCTGGTGGTCT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGACCACCAGGTCAGTaGCAGTTTCAGCATTACTCT +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQRPPGQ*QFQHYS
Trigger: AGAGTAATGCTGAAACTGCAACTGACCTGGTGGTCT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTATCGTACACAGCTCATaGGTGGACCAACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: KTFLLVAASWDSTPARLSIVHSS*VDQQWR
Trigger: CCTCCATTGTTGGTCCACCAATGAGCTGTGTACGAT...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGTCAAACACTCTGGAATaGCTTTTGGGTAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLSNTLE*LLGSTA
Trigger: GGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAGTGGCTGGTTGAGATaGGTTAGGTCAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQSGWLR*VRSRLY
Trigger: GTACAACCTTGACCTAACCAATCTCAACCAGCCACT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLSSSGW*RLVRSR
Trigger: CCTTGACCTAACCAATCTCAACCAGCCACTGCTGGA...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAACAGGGGGATCAAATATaGACACCACCATGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKQGDQI*TPPCGW
Trigger: CCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTG...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTGGGGCCAAGAGTCCTTGAGGAGTACCCAATAGAAGGGCTCTGCTCAGAATCCTGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 5 (lower is better)
Translates to: LGPRVLEEYPIEGLCSESCVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...GGATTCTGAGCAGAGCCCTTCTATTGGGTACTCCTCAAGGACTCTTGGCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCCAGTGACAATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LLVAASWDSTPARLSPVTMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...TGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GGACCACCATCGTCAGGCCTCAACACATATGGTGGGAAAACGTCATCATCATCCATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GPPSSGLNTYGGKTSSSSMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...GGATGATGATGACGTTTTCCCACCATATGTGTTGAGGCCTGACGATGGTGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp GGAGGTTCTATTAGCACCTTGATGTGCAGCATTTTCAGGGACAATTGTGCTGTGGATCCAGATAGCACATaGCATCCCAAGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: GGSISTLMCSIFRDNCAVDPDST*HPKSCS
Trigger: ACTACAGCTCTTGGGATGCAATGTGCTATCTGGATC...CACAGCACAATTGTCCCTGAAAATGCTGCACATCAAGGTGCTAATAGAACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCATCAAGGGATCCAGATAGCACATaGCATCCCAAGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: TAITGLPSEVDLLAFPSRDPDST*HPKSCS
Trigger: ACTACAGCTCTTGGGATGCAATGTGCTATCTGGATC...CCTTGATGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCCAAAGAAAGGACCCATaGGTGAGGAAGCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFQRKDP*VRKQGS
Trigger: TGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTG...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTACCTGGTTTGCAGAGTaGACCAAGAACACCGTCCTT +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFTWFAE*TKNTVL
Trigger: AAGGACGGTGTTCTTGGTCAACTCTGCAAACCAGGT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCCTGTGCAGCTCCTCTaGCTCATGTTTGATGTATTT +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILPVQLL*LMFDVF
Trigger: AAATACATCAAACATGAGCAAGAGGAGCTGCACAGG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCA +
Preference number: 5 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFCPMAV*IVTRGP
Trigger: TGGTCCACGAGTCACAATCAACACGGCCATTGGACA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCA +
Preference number: 5 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFCPMAV*IVTRGP
Trigger: TGGTCCACGAGTCACAATCAACACGGCCATTGGACA...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp GTGTCTGTCGTACCAGGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATCAAAGGGTGTTTCTTTaGTATACTTTGTACTGGGAA +
Preference number: 5 (lower is better)
Translates to: VSVVPGITAITGLPSEVDQRVFL*YTLYWE
Trigger: TTCCCAGTACAAAGTATACAAAAGAAACACCCTTTG...ATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCCTGGTACGACAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ATGTCAGTCTCACCAGTATCAACCGACTTGGAACACTTGTTTCTCAAGATCTTTCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACC +
Preference number: 5 (lower is better)
Translates to: MSVSPVSTDLEHLFLKIFPALEH*NSVCRT
Trigger: GGTACGACAGACACTATTCAAGTGCTCAAGGGCAGG...AAAGATCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGGTGAGACTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTAGAATAAGTCCAGGATaGGGGCCAAGAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSRISPG*GPRVLE
Trigger: CTCAAGGACTCTTGGCCCCAATCCTGGACTTATTCT...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CATCCTCCTCCTCGTAATCCTCATCCAGTTTGCCATTCGCCAGCATGCAGTCTTGATCAAACATACATCTaGGTGGAATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: HPPPRNPHPVCHSPACSLDQTYI*VESSNN
Trigger: GTTGTTTGAAGATTCCACCAAGATGTATGTTTGATC...AAGACTGCATGCTGGCGAATGGCAAACTGGATGAGGATTACGAGGAGGAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAGCTCTGGATCTTGTTaGCCAGCTTCCTTTATCAAT +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILSSGSC*PASFIN
Trigger: ATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGCT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTAGCCAGCTCTGGATCTaGTTTGCCAGCTTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFSQLWI*FASFLY
Trigger: ATAAAGGAAGCTGGCAAACAAGATCCAGAGCTGGCT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AAACCAGACTTCTTCAACTCAATGGATATGGTAACCTCTCCAGAGCGTGTGTACCCAGTATCAACCGACTaGGAACACTTGTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: KPDFFNSMDMVTSPERVYPVSTD*EHLFLK
Trigger: CTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGG...GTACACACGCTCTGGAGAGGTTACCATATCCATTGAGTTGAAGAAGTCTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCCGCCTTCTAAAGTaGAGTTCATCAGGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILFRLLK*SSSGKG
Trigger: ACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAA...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGTATTCCAAAGCATCTaGTGGTATCTTCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLVFQSI*WYLQED
Trigger: ATCCTCCTGAAGATACCACAAGATGCTTTGGAATAC...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACAAAGGGTGTTTCTTTaGTATACTTTGTACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQQRVFL*YTLYWE
Trigger: TTCCCAGTACAAAGTATACAAAAGAAACACCCTTTG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCAGTGGCTGGTTGAGATaGGTTAGGTCAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLSGWLR*VRSRLY
Trigger: GTACAACCTTGACCTAACCAATCTCAACCAGCCACT...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATCCAGCAGTGGCTGGTaGAGATTGGTTAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRISSSGW*RLVRSR
Trigger: CCTTGACCTAACCAATCTCAACCAGCCACTGCTGGA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LQKTFLLVAASWDSTPARGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCCCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GGCATTACGGCCATCACAGGACTTCCATCTGAGGTAGATTTGTTAGCATTTCCACCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: GITAITGLPSEVDLLAFPPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...TGGAAATGCTAACAAATCTACCTCAGATGGAAGTCCTGTGATGGCCGTAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAACCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAATGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQCVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CTGTCTCCAGTGACATCCCACTATCCATGTAAATGGCACCAGCAAGCGACTCAACCTAAGGAGGATTTTTaGGGCATTTTCCATTCATAT +
Preference number: 5 (lower is better)
Translates to: LSPVTSHYPCKWHQQATQPKEDF*GIFHSY
Trigger: ATATGAATGGAAAATGCCCAAAAAATCCTCCTTAGG...TTGAGTCGCTTGCTGGTGCCATTTACATGGATAGTGGGATGTCACTGGAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTGTCAGCAATACACTGCTCAGTGTGCAAGTCGTAAGAAATGGACTGCTTTCCATGAATTGCTTCTTGTaGCCATGGCAGTCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: FVSNTLLSVQVVRNGLLSMNCFL*PWQSKE
Trigger: TTCTTTGGACTGCCATGGCAACAAGAAGCAATTCAT...GGAAAGCAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp TTGCAGAAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGAATCATGAATTGCTTCTaGTTGCCATGGCAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LQKTFLLVAASWDSTPARIMNCF*LPWQSK
Trigger: TTTGGACTGCCATGGCAACAAGAAGCAATTCATGAT...TCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAGCCAGCTCTGGATCTaGTTTGCCAGCTTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSQLWI*FASFLY
Trigger: ATAAAGGAAGCTGGCAAACAAGATCCAGAGCTGGCT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTAGCCAGCTCTGGATCTaGTTTGCCAGCTTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFSQLWI*FASFLY
Trigger: ATAAAGGAAGCTGGCAAACAAGATCCAGAGCTGGCT...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCGTTGCAATAAGCAGGTaGGTCTCATGTGCTCGAAAT +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLVAISR*VSCARN
Trigger: ATTTCGAGCACATGAGACCAACCTGCTTATTGCAAC...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTCCAGTATCAACCGACTaGGAACACTTGTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFPVSTD*EHLFLK
Trigger: CTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGG...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCCAGTATCAACCGACTaGGAACACTTGTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLPVSTD*EHLFLK
Trigger: CTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGG...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTTCAAACACTCTGGAATaGCTTTTGGGTAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: VARVFPACSNLADFLGKSSNTLE*LLGSTA
Trigger: GGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ATGTCAGTCTCACCAGTATCAACCGACTTGGAACACTTGTTTCTCAAGATCTTTAGTGGCTGGTTGAGATaGGTTAGGTCAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: MSVSPVSTDLEHLFLKIFSGWLR*VRSRLY
Trigger: GTACAACCTTGACCTAACCAATCTCAACCAGCCACT...AAAGATCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGGTGAGACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGCATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TATCCATGTAAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 5 (lower is better)
Translates to: YPCKWHQQATQKYPPWPLAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...CAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTTACATGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGAATAAGTCCAGGATaGGGGCCAAGAGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRRISPG*GPRVLE
Trigger: CTCAAGGACTCTTGGCCCCAATCCTGGACTTATTCT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAGGGGGATCAAATATaGACACCACCATGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQGDQI*TPPCGW
Trigger: CCAGCCGCATGGTGGTGTCAATATTTGATCCCCCTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGTTTGAGATCTCTGTGTaGCTCTTGTCTGAACTGCAT +
Preference number: 5 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGFEISV*LLSELH
Trigger: ATGCAGTTCAGACAAGAGCAACACAGAGATCTCAAA...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTGCCATGCTGAGGGGTaGCAAAGCAGGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYCHAEG*QSRAFH
Trigger: ATGAAAAGCCCTGCTTTGCAACCCCTCAGCATGGCA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCAAAGAAAGGACCCATaGGTGAGGAAGCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNQRKDP*VRKQGS
Trigger: TGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAAAAATGTTATCATGAATaGCTTCTTGTTGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQKCYHE*LLVAMA
Trigger: TGCCATGGCAACAAGAAGCAATTCATGATAACATTT...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTGGTTCCATCTCTCTTTaGTCCAAGATGCATTTACTT +
Preference number: 5 (lower is better)
Translates to: KTFLLVAASWDSTPARLSGSISL*SKMHLL
Trigger: AAGTAAATGCATCTTGGACAAAAGAGAGATGGAACC...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAGGGGTGGTCTAGGATaGCAAGATGACACTCATCAA +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRRGGLG*QDDTHQ
Trigger: TTGATGAGTGTCATCTTGCAATCCTAGACCACCCCT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ATGTCAGTCTCACCAGTATCAACCGACTTGGAACACTTGTTTCTCAAGATCTTTCCTGTGCAGCTCCTCTaGCTCATGTTTGATGTATTT +
Preference number: 5 (lower is better)
Translates to: MSVSPVSTDLEHLFLKIFPVQLL*LMFDVF
Trigger: AAATACATCAAACATGAGCAAGAGGAGCTGCACAGG...AAAGATCTTGAGAAACAAGTGTTCCAAGTCGGTTGATACTGGTGAGACTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp ACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCAAACGAACCACCAAGTaGCATTTTGGTATATCAACA +
Preference number: 5 (lower is better)
Translates to: TSKRLKNIPHGLWNFNILKRTTK*HFGIST
Trigger: TGTTGATATACCAAAATGCAACTTGGTGGTTCGTTT...GAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp AAATGGCACCAGCAAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATGCTCTTCCTTTAGATaGAACATAGGATCGATATTC +
Preference number: 5 (lower is better)
Translates to: KWHQQATQKYPPWPLELQCSSFR*NIGSIF
Trigger: GAATATCGATCCTATGTTCAATCTAAAGGAAGAGCA...TTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTTGCTGGTGCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACTGTCCAATGGCCGTGTaGATTGTGACTCGTGGACCA +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNCPMAV*IVTRGP
Trigger: TGGTCCACGAGTCACAATCAACACGGCCATTGGACA...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATCAAACACTCTGGAATaGCTTTTGGGTAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRISNTLE*LLGSTA
Trigger: GGCAGTGCTACCCAAAAGCAATTCCAGAGTGTTTGA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGTGCAGACTTTCCCATTaGGCTTTCCTCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRCRLSH*AFLFSA
Trigger: TGCTGAGAAGAGGAAAGCCAAATGGGAAAGTCTGCA...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GTTGCTTTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGCATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: VAFVLIYYITRRKPIHRGHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...CCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AGTCGTAAGAAATGGACTGCTTTCCCGTGTCAACACCACAGTTTTCTTCTGATGCATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: SRKKWTAFPCQHHSFLLMHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...CATCAGAAGAAAACTGTGGTGTTGACACGGGAAAGCAGTCCATTTCTTACGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAGGTTCTATTAGCACCTaGATGTGCAGCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKGSIST*MCSIFR
Trigger: CCTGAAAATGCTGCACATCAAGGTGCTAATAGAACC...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCCTGCCCTTGAGCACTaGAATAGTGTCTGTCGTACC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYPALEH*NSVCRT
Trigger: GGTACGACAGACACTATTCAAGTGCTCAAGGGCAGG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp CGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCCGATACAGATTACAGTaGCTGACCTTTTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RLKNIPHGLWNFNILFFLRYRLQ*LTFLLL
Trigger: GAGAAGCAAAAAGGTCAGCAACTGTAATCTGTATCG...GAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGATCCAGATAGCACATaGCATCCCAAGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIDPDST*HPKSCS
Trigger: ACTACAGCTCTTGGGATGCAATGTGCTATCTGGATC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTATCTCTGTGTTGCTCTaGTCTGAACTGCATTTTGAC +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFISVLL*SELHFD
Trigger: GTCAAAATGCAGTTCAGACAAGAGCAACACAGAGAT...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTTTTGAGATCTCTGTGTaGCTCTTGTCTGAACTGCAT +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFFEISV*LLSELH
Trigger: ATGCAGTTCAGACAAGAGCAACACAGAGATCTCAAA...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS TCA 90 bp TGTAACTTCTCAGAATCCATTCCTTGCATTTCATTCTTCTCAAGCTaGAACTGCACAAAGTCATCAATGACATGGAAGAGCTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: CNFSESIPCISFFSS*NCTKSSMTWKSSGE
Trigger: CTCTCCTGAGCTCTTCCATGTCATTGATGACTTTGTGCAGTTTCAGCTTGAGAAGAATGAAATGCAAGGAATGGATTCTGAGAAGTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCATGAATTGCTTCTTGTaGCCATGGCAGTCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFMNCFL*PWQSKE
Trigger: TTCTTTGGACTGCCATGGCAACAAGAAGCAATTCAT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGTGCTTAGTAAACTCTaGGTTCCATCTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSVLSKL*VPSLFC
Trigger: ACAAAAGAGAGATGGAACCAAGAGTTTACTAAGCAC...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp CTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTCTTCAGCTCTGGATCTTGTTaGCCAGCTTCCTTTATCAAT +
Preference number: 5 (lower is better)
Translates to: LKNIPHGLWNFNILFFLFSSGSC*PASFIN
Trigger: ATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGCT...GAAGAGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATAGTTGCAATAAGCAGGTaGGTCTCATGTGCTCGAAAT +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIVAISR*VSCARN
Trigger: ATTTCGAGCACATGAGACCAACCTGCTTATTGCAAC...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCCACCAAGTTGCATTTaGGTATATCAACACCCTCTT +
Preference number: 5 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFPPSCI*VYQHPL
Trigger: AAGAGGGTGTTGATATACCAAAATGCAACTTGGTGG...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATCGTACACAGCTCATaGGTGGACCAACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNIVHSS*VDQQWR
Trigger: CCTCCATTGTTGGTCCACCAATGAGCTGTGTACGAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTTTCCGCCTTCTAAAGTaGAGTTCATCAGGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFFRLLK*SSSGKG
Trigger: ACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAA...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATAGTATTCCAAAGCATCTaGTGGTATCTTCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: CLDLLHNQEEANSQGDQIVFQSI*WYLQED
Trigger: ATCCTCCTGAAGATACCACAAGATGCTTTGGAATAC...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp AAAACTTTTCTATTAGTGGCCGCATCATGGGATAGTACACCTGCCAGACTGTCTCAAAGGGTGTTTCTTTaGTATACTTTGTACTGGGAA +
Preference number: 5 (lower is better)
Translates to: KTFLLVAASWDSTPARLSQRVFL*YTLYWE
Trigger: TTCCCAGTACAAAGTATACAAAAGAAACACCCTTTG...AGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAATAGAAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp CCGCCCCATCCCTTGAATATTAAGCATGAACACTGTACATGCATAGATCACTTTGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 5 (lower is better)
Translates to: PPHPLNIKHEHCTCIDHFAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...AAAGTGATCTATGCATGTACAGTGTTCATGCTTAATATTCAAGGGATGGGGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp AGCATTTCCATCAAGGTATTTATTACTCAGGAGAGTACATTCATCGCTGGGCTGGCCATTGGCGAGATTTaGATTGTAAGAAAGACCATT +
Preference number: 5 (lower is better)
Translates to: SISIKVFITQESTFIAGLAIGEI*IVRKTI
Trigger: AATGGTCTTTCTTACAATCAAAATCTCGCCAATGGC...CAGCCCAGCGATGAATGTACTCTCCTGAGTAATAAATACCTTGATGGAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TCATCCTCCTCAGATCTCCTAAGCAAGTTTAATTCTCTCTTTTTACAGCTGAGGCCAGCATGCAGTCTTTaGTCATTTCATCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SSSSDLLSKFNSLFLQLRPACSL*SFHLFP
Trigger: GGGAAAAAGATGAAATGACAAAAGACTGCATGCTGG...CCTCAGCTGTAAAAAGAGAGAATTAAACTTGCTTAGGAGATCTGAGGAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556045.6
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATTGGTGGCTTCAATCTaGTGTAAAGGGATTAGACAC +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKLVASI*CKGIRH
Trigger: GTGTCTAATCCCTTTACACAAGATTGAAGCCACCAA...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675540.1
CDS GCA 90 bp ACTTTAGGAGTTACAAATTTCAGGTCAAGTGAGGCAGGTGAGAAGTaGTCTTCACATAGTGCATGTATTTTCCTTAGGAAAGTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: TLGVTNFRSSEAGEK*SSHSACIFLRKVSV
Trigger: TACAGACACTTTCCTAAGGAAAATACATGCACTATGTGAAGAGCACTTCTCACCTGCCTCACTTGACCTGAAATTTGTAACTCCTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGACCACCAGGTCAGTaGCAGTTTCAGCATTACTCT +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNRPPGQ*QFQHYS
Trigger: AGAGTAATGCTGAAACTGCAACTGACCTGGTGGTCT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAGTGGCTGGTTGAGATaGGTTAGGTCAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYSGWLR*VRSRLY
Trigger: GTACAACCTTGACCTAACCAATCTCAACCAGCCACT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCATCTGAGGTAGATTaGTTAGCATTTCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPSEVD*LAFPSR
Trigger: CCTTGATGGAAATGCTAACAAATCTACCTCAGATGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAAATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCAGTCCGCTATGCTTTaGTCAGCAATACACTGCTCA +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYQSAML*SAIHCS
Trigger: TGAGCAGTGTATTGCTGACAAAAGCATAGCGGACTG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTCTGATCAAACATACATCTaGGTGGAATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: ATQKYPPWPLELQYPLLSDQTYI*VESSNN
Trigger: GTTGTTTGAAGATTCCACCAAGATGTATGTTTGATC...AGAAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000556045.6
ENST00000675540.1
ENST00000675995.1
CDS GCA 90 bp CAAGTTGCATTTTGGTATATCAACACCCTCTTCTACAATACTTGTTaGAATAAGCAGGTTGGTCTCATGTGCTCGAAATTTCCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: QVAFWYINTLFYNTC*NKQVGLMCSKFPKY
Trigger: GTACTTAGGAAATTTCGAGCACATGAGACCAACCTGCTTATTGCAACAAGTATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS GCA 90 bp CATAGGATCGATATTCTGTGGGCAAATCAAAACGAACCACCAAGTTaGATTTTGGTATATCAACACCCTCTTCTACAATACTTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: HRIDILWANQNEPPS*ILVYQHPLLQYLLQ
Trigger: TTGCAACAAGTATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTGGTGGTTCGTTTTGATTTGCCCACAGAATATCGATCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS-3UTR CAA 90 bp AAGCGACTCAAAAATATCCCCCATGGCCTTTGGAACTTCAATATCCTCTTCTTTAAATGTTATCATGAATaGCTTCTTGTTGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: KRLKNIPHGLWNFNILFFKCYHE*LLVAMA
Trigger: TGCCATGGCAACAAGAAGCAATTCATGATAACATTT...AAAGAAGAGGATATTGAAGTTCCAAAGGCCATGGGGGATATTTTTGAGTCGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000556045.6
ENST00000675995.1
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGGGTTCCATCTCTCTTTaGTCCAAGATGCATTTACTT +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRGSISL*SKMHLL
Trigger: AAGTAAATGCATCTTGGACAAAAGAGAGATGGAACC...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCCTGTGCAGCTCCTCTaGCTCATGTTTGATGTATTT +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNPVQLL*LMFDVF
Trigger: AAATACATCAAACATGAGCAAGAGGAGCTGCACAGG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAATATGCTCTTCCTTTAGATaGAACATAGGATCGATATTC +
Preference number: 5 (lower is better)
Translates to: CLDLLHNQEEANSQGDQICSSFR*NIGSIF
Trigger: GAATATCGATCCTATGTTCAATCTAAAGGAAGAGCA...TATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATACATTTTCAGGGACAATaGTGCTGTGCTTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRIHFQGQ*CCAYSN
Trigger: ATTACTGTAAGCACAGCACAATTGTCCCTGAAAATG...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GTTGCACGGGTATTTCCTGCTTGTAGTAATTTAGCTGATTTCCTTGGCAAAAGTTGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 5 (lower is better)
Translates to: VARVFPACSNLADFLGKSCVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...ACTTTTGCCAAGGAAATCAGCTAAATTACTACAAGCAGGAAATACCCGTGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTGTCTTGATTTACTACATAACCAGGAGGAAGCCAATTCACAGGGGGATCAAACCTAAGGAGGATTTTTaGGGCATTTTCCATTCATAT +
Preference number: 5 (lower is better)
Translates to: FVLIYYITRRKPIHRGIKPKEDF*GIFHSY
Trigger: ATATGAATGGAAAATGCCCAAAAAATCCTCCTTAGG...TTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATGAATTGCTTCTTGTaGCCATGGCAGTCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNMNCFL*PWQSKE
Trigger: TTCTTTGGACTGCCATGGCAACAAGAAGCAATTCAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATCATGAATTGCTTCTaGTTGCCATGGCAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNIMNCF*LPWQSK
Trigger: TTTGGACTGCCATGGCAACAAGAAGCAATTCATGAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACAGCTCTGGATCTTGTTaGCCAGCTTCCTTTATCAAT +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNSSGSC*PASFIN
Trigger: ATTGATAAAGGAAGCTGGCAAACAAGATCCAGAGCT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACCCACCAAGTTGCATTTaGGTATATCAACACCCTCTT +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNPPSCI*VYQHPL
Trigger: AAGAGGGTGTTGATATACCAAAATGCAACTTGGTGG...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGAAACGAACCACCAAGTaGCATTTTGGTATATCAACA +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRKRTTK*HFGIST
Trigger: TGTTGATATACCAAAATGCAACTTGGTGGTTCGTTT...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACTTCCGCCTTCTAAAGTaGAGTTCATCAGGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNFRLLK*SSSGKG
Trigger: ACCTTTACCTGATGAACTCAACTTTAGAAGGCGGAA...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGTATTCCAAAGCATCTaGTGGTATCTTCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYVFQSI*WYLQED
Trigger: ATCCTCCTGAAGATACCACAAGATGCTTTGGAATAC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCGATACAGATTACAGTaGCTGACCTTTTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYRYRLQ*LTFLLL
Trigger: GAGAAGCAAAAAGGTCAGCAACTGTAATCTGTATCG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp GGGTCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATGTGTTGCTTTTGTCTaGATTTACTACATAACCAGG +
Preference number: 5 (lower is better)
Translates to: GSFCPGRTIKGCGNTSRICVAFV*IYYITR
Trigger: CCTGGTTATGTAGTAAATCAAGACAAAAGCAACACA...TATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCCAGCATGCAGTCTTTaGTCATTTCATCTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYPACSL*SFHLFP
Trigger: GGGAAAAAGATGAAATGACAAAAGACTGCATGCTGG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp ACTAAATCAAAAACCAAAAGCAGCACTGAATGGGCAAGAGAAAGATATTTGCGGCCTAAGGAGGATTTTTaGGGCATTTTCCATTCATAT +
Preference number: 5 (lower is better)
Translates to: TKSKTKSSTEWARERYLRPKEDF*GIFHSY
Trigger: ATATGAATGGAAAATGCCCAAAAAATCCTCCTTAGG...CCGCAAATATCTTTCTCTTGCCCATTCAGTGCTGCTTTTGGTTTTTGATTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS GCA 90 bp AGGAAAGTGTCTGTAAACAATAAAAATTTCCTGTGCAGCTCCTCTTaGTCATGTTTGATGTATTTCTGTAGTTCTCTTACCATCATTCCA +
Preference number: 5 (lower is better)
Translates to: RKVSVNNKNFLCSSS*SCLMYFCSSLTIIP
Trigger: TGGAATGATGGTAAGAGAACTACAGAAATACATCAAACATGAGCAAGAGGAGCTGCACAGGAAATTTTTATTGTTTACAGACACTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGTGCTTAGTAAACTCTaGGTTCCATCTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYVLSKL*VPSLFC
Trigger: ACAAAAGAGAGATGGAACCAAGAGTTTACTAAGCAC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAACATGCAGAATCAGTGGTaGAAAAAGGAGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: FCPGRTIKGCGNTSRIYNMQNQW*KKEKER
Trigger: TCTCTCTTTCTCCTTTTTCAACCACTGATTCTGCAT...GTTGTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGAATTCACATCCAGCCTaGTTAACTGCACACTTTTAC +
Preference number: 5 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWNSHPA*LTAHFY
Trigger: GTAAAAGTGTGCAGTTAACAAGGCTGGATGTGAATT...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675540.1
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACAAATGTTATCATGAATaGCTTCTTGTTGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYKCYHE*LLVAMA
Trigger: TGCCATGGCAACAAGAAGCAATTCATGATAACATTT...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACTGCTCTTCCTTTAGATaGAACATAGGATCGATATTC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYCSSFR*NIGSIF
Trigger: GAATATCGATCCTATGTTCAATCTAAAGGAAGAGCA...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACCAAAGGGTGTTTCTTTaGTATACTTTGTACTGGGAA +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYQRVFL*YTLYWE
Trigger: TTCCCAGTACAAAGTATACAAAAGAAACACCCTTTG...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TCTTTTTGTCCAGGAAGAACAATAAAAGGCTGTGGAAATACATCCAGAATATACGATCAAACATACATCTaGGTGGAATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: SFCPGRTIKGCGNTSRIYDQTYI*VESSNN
Trigger: GTTGTTTGAAGATTCCACCAAGATGTATGTTTGATC...GTATATTCTGGATGTATTTCCACAGCCTTTTATTGTTCTTCCTGGACAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532939.3
CDS-3UTR CAA 90 bp TATAAGGTGATTCAGTGTTTTATCTGCATCTGGATGATCAAACATACATCTTGGGATCAAACATACATCTaGGTGGAATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: YKVIQCFICIWMIKHTSWDQTYI*VESSNN
Trigger: GTTGTTTGAAGATTCCACCAAGATGTATGTTTGATC...CCAAGATGTATGTTTGATCATCCAGATGCAGATAAAACACTGAATCACCTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675540.1
ENST00000675995.1
CDS GCA 72 bp AAAGGACCCATTGGTGAGGAAGCAGGGGTCATGAGCTaGAGGCCTGCCATGCTGAGGGGTTGCAAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: KGPIGEEAGVMS*RPAMLRGCKAG
Trigger: CCCTGCTTTGCAACCCCTCAGCATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCTCACCAATGGGTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000529206.1
ENST00000529720.1
ENST00000531162.6
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS TCA 72 bp TTGTTGCCATGGCAGTCCAAAGAAAGGACCCATTGGTaGGGAAGCAGGGGTCATGAGCTGCAGGCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: LLPWQSKERTHW*GSRGHELQACH
Trigger: ATGGCAGGCCTGCAGCTCATGACCCCTGCTTCCTCACCAATGGGTCCTTTCTTTGGACTGCCATGGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000529206.1
ENST00000529720.1
ENST00000531162.6
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS CAA 72 bp CCACACAAAGGAAACACGCGTTACGACTTACTGCAATaGCATACCCCCGACAGACAGGGCTGCCGTCTAGTC +
Preference number: 6 (lower is better)
Translates to: PHKGNTRYDLLQ*HTPDRQGCRLV
Trigger: GACTAGACGGCAGCCCTGTCTGTCGGGGGTATGCAATTGCAGTAAGTCGTAACGCGTGTTTCCTTTGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527554.2
CDS CCA 72 bp GTCAGGGATTCAAATATCTGTGTGAAAGCCTACCACTaGCTTTACTGTCAGCAGGATTTCCTCGCCCCACAG +
Preference number: 6 (lower is better)
Translates to: VRDSNICVKAYH*LYCQQDFLAPQ
Trigger: CTGTGGGGCGAGGAAATCCTGCTGACAGTAAAGCCAGTGGTAGGCTTTCACACAGATATTTGAATCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674628.1
CDS CAA 90 bp AAGCTGACACCACACAAAGGAAACACGCGTTACGACTTACTGCAATaGCATACCCCCGACAGACAGGGCTGCCGTCTAGTCTTTATTACA +
Preference number: 6 (lower is better)
Translates to: KLTPHKGNTRYDLLQ*HTPDRQGCRLVFIT
Trigger: TGTAATAAAGACTAGACGGCAGCCCTGTCTGTCGGGGGTATGCAATTGCAGTAAGTCGTAACGCGTGTTTCCTTTGTGTGGTGTCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527554.2
CDS TCA 72 bp CCTTCAAACAGAGGGTCAGGGATTCAAATATCTGTGTaGAAGCCTACCACTGGCTTTACTGTCAGCAGGATT +
Preference number: 6 (lower is better)
Translates to: PSNRGSGIQISV*KPTTGFTVSRI
Trigger: AATCCTGCTGACAGTAAAGCCAGTGGTAGGCTTTCACACAGATATTTGAATCCCTGACCCTCTGTTTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674628.1
CDS CCA 72 bp CAGCAGTCTTTCATAAAGCCCACTTCTGTCAGTAAATaGTCCACAATCCACCACAATCTCACATGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: QQSFIKPTSVSK*STIHHNLTWLR
Trigger: TCTCAGCCATGTGAGATTGTGGTGGATTGTGGACCATTTACTGACAGAAGTGGGCTTTATGAAAGACTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS CAA 72 bp CGCCCCACAGAAGGGAATTTCCTCTCTTGCACTGCTTaGGAGTGTTCATTGCTATTACTCTATGAAACGTTT +
Preference number: 6 (lower is better)
Translates to: RPTEGNFLSCTA*ECSLLLLYETF
Trigger: AAACGTTTCATAGAGTAATAGCAATGAACACTCCAAAGCAGTGCAAGAGAGGAAATTCCCTTCTGTGGGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674628.1
CDS GCA 72 bp GACTTACTGCAATTGCATACCCCCGACAGACAGGGCTaGCGTCTAGTCTTTATTACAGCATTATTTCATAAA +
Preference number: 6 (lower is better)
Translates to: DLLQLHTPDRQG*RLVFITALFHK
Trigger: TTTATGAAATAATGCTGTAATAAAGACTAGACGGCAGCCCTGTCTGTCGGGGGTATGCAATTGCAGTAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527554.2
CDS CAA 72 bp ACACCCTCTTCTACAATACTTGTTGCAATAAGCAGGTaGGTCTCATGTGCTCGAAATTTCCTAAGTACCTCT +
Preference number: 6 (lower is better)
Translates to: TPSSTILVAISR*VSCARNFLSTS
Trigger: AGAGGTACTTAGGAAATTTCGAGCACATGAGACCAACCTGCTTATTGCAACAAGTATTGTAGAAGAGGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 90 bp GCAGTTCAACCTGATATTTTCTTGGCGTATAAATGTTATCATGAATaGCTTCTTGTTGCCATGGCAGTCCAAAGAAAGGACCCATTGGTG +
Preference number: 6 (lower is better)
Translates to: AVQPDIFLAYKCYHE*LLVAMAVQRKDPLV
Trigger: CACCAATGGGTCCTTTCTTTGGACTGCCATGGCAACAAGAAGCAATTCATGATAACATTTATACGCCAAGAAAATATCAGGTTGAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000529206.1
ENST00000529720.1
ENST00000531162.6
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS CAA 90 bp GGTATATCAACACCCTCTTCTACAATACTTGTTGCAATAAGCAGGTaGGTCTCATGTGCTCGAAATTTCCTAAGTACCTCTTCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: GISTPSSTILVAISR*VSCARNFLSTSSCF
Trigger: AAAACAGGAAGAGGTACTTAGGAAATTTCGAGCACATGAGACCAACCTGCTTATTGCAACAAGTATTGTAGAAGAGGGTGTTGATATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 90 bp CAGAAATGCCTGTCTGCTACTCTCTGTGGAAACAACGTTAGATTCTaGAACTCACAGGTAATGGTACTTATAGAGAATTCTTACTCTTGC +
Preference number: 6 (lower is better)
Translates to: QKCLSATLCGNNVRF*NSQVMVLIENSYSC
Trigger: GCAAGAGTAAGAATTCTCTATAAGTACCATTACCTGTGAGTTCAAGAATCTAACGTTGTTTCCACAGAGAGTAGCAGACAGGCATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529206.1
CDS CCA 72 bp TGTGGGCAAATCAAAACGAACCACCAAGTTGCATTTTaGTATATCAACACCCTCTTCTACAATACTTGTTGC +
Preference number: 6 (lower is better)
Translates to: CGQIKTNHQVAF*YINTLFYNTCC
Trigger: GCAACAAGTATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTGGTGGTTCGTTTTGATTTGCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 72 bp CTGTGGGCAAATCAAAACGAACCACCAAGTTGCATTTaGGTATATCAACACCCTCTTCTACAATACTTGTTG +
Preference number: 6 (lower is better)
Translates to: LWANQNEPPSCI*VYQHPLLQYLL
Trigger: CAACAAGTATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTGGTGGTTCGTTTTGATTTGCCCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 90 bp TGCTGTCGCTCATATGGTTTATATTTGCGTAAGATTTCGAGCAGTTaGATTACTTTAGGAGTTACAAATTTCAGGTCAAGTGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: CCRSYGLYLRKISSS*ITLGVTNFRSSEAG
Trigger: ACCTGCCTCACTTGACCTGAAATTTGTAACTCCTAAAGTAATCAAACTGCTCGAAATCTTACGCAAATATAAACCATATGAGCGACAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS GCA 72 bp GATATTCTGTGGGCAAATCAAAACGAACCACCAAGTTaGATTTTGGTATATCAACACCCTCTTCTACAATAC +
Preference number: 6 (lower is better)
Translates to: DILWANQNEPPS*ILVYQHPLLQY
Trigger: GTATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTGGTGGTTCGTTTTGATTTGCCCACAGAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS GCA 72 bp AAGATGACTCATGAAATTATTAGTCCCATTTGCTGCTaGAATTACACTACACAGACCCATGAAAAGATCCAG +
Preference number: 6 (lower is better)
Translates to: KMTHEIISPICC*NYTTQTHEKIQ
Trigger: CTGGATCTTTTCATGGGTCTGTGTAGTGTAATTGCAGCAGCAAATGGGACTAATAATTTCATGAGTCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527414.5
CDS CAA 72 bp CCTGATATTTTCTTGGCGTATAAATGTTATCATGAATaGCTTCTTGTTGCCATGGCAGTCCAAAGAAAGGAC +
Preference number: 6 (lower is better)
Translates to: PDIFLAYKCYHE*LLVAMAVQRKD
Trigger: GTCCTTTCTTTGGACTGCCATGGCAACAAGAAGCAATTCATGATAACATTTATACGCCAAGAAAATATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000529206.1
ENST00000529720.1
ENST00000531162.6
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS CAA 72 bp CGATATTCTGTGGGCAAATCAAAACGAACCACCAAGTaGCATTTTGGTATATCAACACCCTCTTCTACAATA +
Preference number: 6 (lower is better)
Translates to: RYSVGKSKRTTK*HFGISTPSSTI
Trigger: TATTGTAGAAGAGGGTGTTGATATACCAAAATGCAACTTGGTGGTTCGTTTTGATTTGCCCACAGAATATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 72 bp ATAATTAGAGATGGGTGCCCTTGCTCTTCCTTTAGATaGAACATAGGATCGATATTCTGTGGGCAAATCAAA +
Preference number: 6 (lower is better)
Translates to: IIRDGCPCSSFR*NIGSIFCGQIK
Trigger: TTTGATTTGCCCACAGAATATCGATCCTATGTTCAATCTAAAGGAAGAGCAAGGGCACCCATCTCTAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
CDS CAA 72 bp CTGTCTGCTACTCTCTGTGGAAACAACGTTAGATTCTaGAACTCACAGGTAATGGTACTTATAGAGAATTCT +
Preference number: 6 (lower is better)
Translates to: LSATLCGNNVRF*NSQVMVLIENS
Trigger: AGAATTCTCTATAAGTACCATTACCTGTGAGTTCAAGAATCTAACGTTGTTTCCACAGAGAGTAGCAGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529206.1
CDS CAA 72 bp ATAATTAGAGATGGGTGCCCTTGCTCTTCCTTTAGATaGAACATAGGATCGATATTCTCTTCCTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: IIRDGCPCSSFR*NIGSIFSSCFL
Trigger: CAGAAAACAGGAAGAGAATATCGATCCTATGTTCAATCTAAAGGAAGAGCAAGGGCACCCATCTCTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675995.1
CDS CAA 90 bp TACCACTCAACGCTTTCAAACTGCTGTCGCTCATATGGTTTATATTaGCGTAAGATTTCGAGCAGTTTGATTACTTTAGGAGTTACAAAT +
Preference number: 6 (lower is better)
Translates to: YHSTLSNCCRSYGLY*RKISSSLITLGVTN
Trigger: ATTTGTAACTCCTAAAGTAATCAAACTGCTCGAAATCTTACGCAAATATAAACCATATGAGCGACAGCAGTTTGAAAGCGTTGAGTGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1
CDS CAA 90 bp TCTGTAAACAATAAAAATTTCCTGTGCAGCTCCTCTTGCTCATGTTaGATGTATTTCTGTAGTTCTCTTACCATCATTCCAGCTACTTTA +
Preference number: 6 (lower is better)
Translates to: SVNNKNFLCSSSCSC*MYFCSSLTIIPATL
Trigger: TAAAGTAGCTGGAATGATGGTAAGAGAACTACAGAAATACATCAAACATGAGCAAGAGGAGCTGCACAGGAAATTTTTATTGTTTACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343455.8
ENST00000393063.6
ENST00000526495.6
ENST00000527414.5
ENST00000532939.3
ENST00000541352.5
ENST00000556045.6
ENST00000674628.1
ENST00000675995.1