RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX37 (Homo sapiens)

Ensembl gene IDs: ENSG00000150990

Ensembl transcript IDs: ENST00000308736.7, ENST00000507267.2, ENST00000542400.5, ENST00000543962.1, ENST00000544745.2, ENST00000679875.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTaGCAGGCTGCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGC +
Preference number: 1 (lower is better)
Translates to: ESRPRSPCQVVTVAR*QAAASPPVPKPVLG
Trigger: GCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR GCA 90 bp ACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: TKPMPGGHGRTVTGC*QPSSPQTSPRPCSQ
Trigger: CTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR GCA 90 bp CCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTaGCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAG +
Preference number: 1 (lower is better)
Translates to: PDSGEGRIAGRRPST*LLGLLAGRAGKGLQ
Trigger: CTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp ATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATaGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: ILPALGSGETSVPSP*RTEGRGLPTPWSCL
Trigger: CAGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR TCA 90 bp GGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATaGGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGA +
Preference number: 1 (lower is better)
Translates to: GTGGSTLHTGSSSHG*GFPGLDPLPESRPR
Trigger: TCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp AGGCCCCTCAAGGTCAACACAGAGCTCAGTGGCTCACCTAACATCTaGGACGGCTGTGAGGCCAGGGCTGGGCAGCCCTCCCTGACTCTG +
Preference number: 1 (lower is better)
Translates to: RPLKVNTELSGSPNI*DGCEARAGQPSLTL
Trigger: CAGAGTCAGGGAGGGCTGCCCAGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCTTGAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp CAGATGAGATGCCCACTCCCTGTTGCCATAACACAGGAAAGGCGTTaGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGGGGGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: QMRCPLPVAITQERR*RPPSQEGMEPGGPQ
Trigger: CTGGGGGCCCCCAGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCATCTCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp CCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGGTaGGGGGCCAGGCTTTCTCGATATCGGGGTGCATGGCCTGTGGAA +
Preference number: 1 (lower is better)
Translates to: PVLGPAARFLVSGQW*GARLSRYRGAWPVE
Trigger: TTCCACAGGCCATGCACCCCGATATCGAGAAAGCCTGGCCCCCCACCACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR GCA 90 bp TCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTaGCAGCGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGA +
Preference number: 1 (lower is better)
Translates to: SPPKPQKQSQEQNPF*QRWALGRHLCPHHG
Trigger: TCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTaGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGG +
Preference number: 1 (lower is better)
Translates to: RSKARSRIHSASAGL*GDICALTMEDRRQG
Trigger: CCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp AAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTaGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAG +
Preference number: 1 (lower is better)
Translates to: KPQKQSQEQNPFCQR*ALGRHLCPHHGGQK
Trigger: CTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 90 bp ATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATaGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGG +
Preference number: 1 (lower is better)
Translates to: IHHIINSSKSHPRAR*HGRQHPSYGIELSW
Trigger: CCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR TCA 90 bp AGCCCTGCTGCTCCACAGGGGACTAATGTAGTCCAAAGAGCACACTaGACAGAACAGCGTCCAGCACGTGAGATGAAATCATCATCCACC +
Preference number: 1 (lower is better)
Translates to: SPAAPQGTNVVQRAH*TEQRPAREMKSSST
Trigger: GGTGGATGATGATTTCATCTCACGTGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGGACTACATTAGTCCCCTGTGGAGCAGCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCACCCCCGGGCCAGATaGCACGGGCGGCAGCACCCT +
Preference number: 2 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLHPRAR*HGRQHP
Trigger: AGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGCCACGAAGCCCATaGCAGGTGGTCACGGTCGCA +
Preference number: 2 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGRPRSP*QVVTVA
Trigger: TGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCT...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGAAGCCCATGCCAGGTaGTCACGGTCGCACGGTGAC +
Preference number: 2 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLEAHAR*SRSHGD
Trigger: GTCACCGTGCGACCGTGACCACCTGGCATGGGCTTC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCGAAGCCCATGCCAGGTaGTCACGGTCGCACGGTGAC +
Preference number: 2 (lower is better)
Translates to: HPRARWHGRQHPSYGIELEAHAR*SRSHGD
Trigger: GTCACCGTGCGACCGTGACCACCTGGCATGGGCTTC...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCCGCTCCCTGCCGTCTaGGAGCTGACCACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLPLPAV*ELTTGR
Trigger: TCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACCGCTCCCTGCCGTCTaGGAGCTGACCACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRPLPAV*ELTTGR
Trigger: TCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGG...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGAGCGGCATGGCAGCGGTaGCCAAGCACAGCCAACGTC +
Preference number: 2 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRAAWQR*PSTANV
Trigger: GACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGC...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCAGAAGGCATGGAGCCTaGGGGCCCCCAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPARRHGA*GPPARP
Trigger: GGGCCTGGCTGGGGGCCCCCAGGCTCCATGCCTTCT...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGAGTCAGCTCCGCTCCCTaGCGTCTGAGAGCTGACCAC +
Preference number: 2 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRVSSAP*RLRADH
Trigger: GTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGAC...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp ACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATCTGGGATCGAGCTCTCATaGATGAGGGTTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: TCLLGLLAGRAGKGLQRSGIELS*MRVPRA
Trigger: AGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCC...AGATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGAAGGCATGGAGCCTaGGGGCCCCCAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: RSKARSRIHSASAGLWGDRRHGA*GPPARP
Trigger: GGGCCTGGCTGGGGGCCCCCAGGCTCCATGCCTTCT...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACGTCACGGTCGCACGGTaGCAGGCTGCTGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RSKARSRIHSASAGLWGDVTVAR*QAAASP
Trigger: AGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGAC...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: TANVSSAPCRLRADHRQMTVTGC*QPSSPQ
Trigger: TTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGT...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCAGGCCACGAAGCCCATaGCAGGTGGTCACGGTCGCA +
Preference number: 2 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVRPRSP*QVVTVA
Trigger: TGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCT...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCTGACCACAGGCAGATaGGATGCCCACTCCCTGTTG +
Preference number: 2 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLLTTGR*DAHSLL
Trigger: CAACAGGGAGTGGGCATCTCATCTGCCTGTGGTCAG...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGGAGGCCCTCCACGTaGCTCCTCGGCCTTCTGGCA +
Preference number: 2 (lower is better)
Translates to: RSKARSRIHSASAGLWGDRRPST*LLGLLA
Trigger: TGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCT...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGCTAGGCGCATCCTCTaGGGCATGGCAGCGGTGACC +
Preference number: 2 (lower is better)
Translates to: EAAEAKPGAESILPALGSARRIL*GMAAVT
Trigger: GGTCACCGCTGCCATGCCGCAGAGGATGCGCCTAGC...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGATGGTCCTGCCTGGGGTaGTCCTGTCCCTCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRWSCLG*SCPSFL
Trigger: CAAGAAAGAGGGACAGGAGCACCCCAGGCAGGACCA...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTTTCTCGATATCGGGGTaGATGGCCTGTGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPFSISG*MACGSH
Trigger: GTGGCTTCCACAGGCCATGCACCCCGATATCGAGAA...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR CCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCGGGATCGAGCTCTCATaGATGAGGGTTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLGIELS*MRVPRA
Trigger: AGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCC...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGCCAGCGCTGGGCTCTaGGGAGACATCTGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: EAKPGAESILPALGSGETASAGL*GDICAL
Trigger: GAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGC...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CAA 90 bp CCCTTCATACGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: PFIRDRALMDEGSQG*THFLRAGHEAHARW
Trigger: CCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCGTATGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: NTELSGSPNIWDGCEARATVTGC*QPSSPQ
Trigger: TTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTGTCAGCTCCGCTCCCTaGCGTCTGAGAGCTGACCAC +
Preference number: 2 (lower is better)
Translates to: AKPGAESILPALGSGETSVSSAP*RLRADH
Trigger: GTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGAC...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGACACAGGAAAGGCGTTaGCGGCCACCCTCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: TANVSSAPCRLRADHRQMTQERR*RPPSQE
Trigger: TTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGT...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCATCGAGCTCTCATGGATaGGGGTTCCCAGGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGASSSHG*GFPGLD
Trigger: GTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGA...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCGTCCAGCACGTGAGATaGAATCATCATCCACCATAT +
Preference number: 2 (lower is better)
Translates to: HPRARWHGRQHPSYGIELVQHVR*NHHPPY
Trigger: ATATGGTGGATGATGATTTCATCTCACGTGCTGGAC...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACACCTGTCCCTCTTTCTTaGTGGGGGACCTACCCCACC +
Preference number: 2 (lower is better)
Translates to: EAKPGAESILPALGSGETPVPLS*WGTYPT
Trigger: GGTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGG...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTACCAGTCCTCGGCCCTaGAGCCAGGTTTCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: NTELSGSPNIWDGCEARATSPRP*SQVSGQ
Trigger: CTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR CCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGGGCTCACCTAACATCTaGGACGGCTGTGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VAITQERRWRPPSQEGMEGSPNI*DGCEAR
Trigger: CCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCC...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATGTCACGGTCGCACGGTaGCAGGCTGCTGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHVTVAR*QAAASP
Trigger: AGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGAC...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp GGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGACAGCGTCCAGCACGTaGGATGAAATCATCATCCAC +
Preference number: 2 (lower is better)
Translates to: GKNCRKEALHVPPRPSGRTASST*DEIIIH
Trigger: GTGGATGATGATTTCATCTCACGTGCTGGACGCTGT...CCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCACAGCGTCCAGCACGTaGGATGAAATCATCATCCAC +
Preference number: 2 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLTASST*DEIIIH
Trigger: GTGGATGATGATTTCATCTCACGTGCTGGACGCTGT...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCGATATCGGGGTGCATaGCCTGTGGAAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: VAITQERRWRPPSQEGMERYRGA*PVEATH
Trigger: GTGAGTGGCTTCCACAGGCCATGCACCCCGATATCG...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR TCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGTCCAAAGAGCACACTaGACAGAACAGCGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAVQRAH*TEQRPA
Trigger: TGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGGAC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTATGCCCACTCCCTGTTaGCATAACACAGGAAAGGCG +
Preference number: 2 (lower is better)
Translates to: AITQERRWRPPSQEGMEPMPTPC*HNTGKA
Trigger: CGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCAT...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR TCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGTCCAGCACGTGAGATaGAATCATCATCCACCATAT +
Preference number: 2 (lower is better)
Translates to: AITQERRWRPPSQEGMEPVQHVR*NHHPPY
Trigger: ATATGGTGGATGATGATTTCATCTCACGTGCTGGAC...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGCACAGGCAGATGAGATaGCCACTCCCTGTTGCCATA +
Preference number: 2 (lower is better)
Translates to: RNILFHNCLHRSRRSKARHRQMR*PLPVAI
Trigger: TATGGCAACAGGGAGTGGGCATCTCATCTGCCTGTG...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR GCA 72 bp ATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCC +
Preference number: 3 (lower is better)
Translates to: MPGGHGRTVTGC*QPSSPQTSPRP
Trigger: GGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR GCA 72 bp GGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTaGCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAG +
Preference number: 3 (lower is better)
Translates to: GEGRIAGRRPST*LLGLLAGRAGK
Trigger: CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR GCA 72 bp TGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTaGAGCCAGGTTTCTGGTCAGTGGACAGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: CQPSSPQTSPRP*SQVSGQWTVVG
Trigger: CCCCACCACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR CAA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGREGSQG*THFLRA
Trigger: TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTC...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp GGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGGTaGGGGGCCAGGCTTTCTCGATATCGGGGTGCATGG +
Preference number: 3 (lower is better)
Translates to: GPAARFLVSGQW*GARLSRYRGAW
Trigger: CCATGCACCCCGATATCGAGAAAGCCTGGCCCCCCACCACTGTCCACTGACCAGAAACCTGGCTGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR CAA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCTCCTGTCCCTCTTTCTaGCTGGGGGACCTACCCCAC +
Preference number: 3 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVSCPSF*LGDLPH
Trigger: GTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGGA...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp TGCCCACTCCCTGTTGCCATAACACAGGAAAGGCGTTaGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: CPLPVAITQERR*RPPSQEGMEPG
Trigger: CCCAGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp GCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTaGGGAGACATCTGTGCCCTCACCATGGAGGACAGA +
Preference number: 3 (lower is better)
Translates to: ARSRIHSASAGL*GDICALTMEDR
Trigger: TCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp GGGCCAGGCTTTCTCGATATCGGGGTGCATGGCCTGTaGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: GPGFLDIGVHGL*KPLTVLSQQVC
Trigger: GCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR-3UTR CAA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAAACACAGGAAAGGCGTaGGCGGCCACCCTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: EAKPGAESILPALGSGETNTGKA*AATLPR
Trigger: TCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTT...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR TCA 72 bp GGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATaGGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: GSTLHTGSSSHG*GFPGLDPLPES
Trigger: GCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CAA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTCTGGAGAGGGAAGAATaGCAGGAAGGAGGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: AKPGAESILPALGSGETSLEREE*QEGGPP
Trigger: TGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp AAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTaGGCTCTGGGGAGACATCTGTGCCCTCACCATGGA +
Preference number: 3 (lower is better)
Translates to: KQSQEQNPFCQR*ALGRHLCPHHG
Trigger: TCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CCA 72 bp ATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATaGCACGGGCGGCAGCACCCTTCATACGGGATCGAG +
Preference number: 3 (lower is better)
Translates to: IINSSKSHPRAR*HGRQHPSYGIE
Trigger: CTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR-3UTR CAA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: DEIIIHHIINSSKSHPRAEGSQG*THFLRA
Trigger: TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTC...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR TCA 72 bp GCTCCACAGGGGACTAATGTAGTCCAAAGAGCACACTaGACAGAACAGCGTCCAGCACGTGAGATGAAATCA +
Preference number: 3 (lower is better)
Translates to: APQGTNVVQRAH*TEQRPAREMKS
Trigger: TGATTTCATCTCACGTGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGGACTACATTAGTCCCCTGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR TCA 72 bp CCAAAGAGCACACTGAACAGAACAGCGTCCAGCACGTaGGATGAAATCATCATCCACCATATAATAAACAGT +
Preference number: 3 (lower is better)
Translates to: PKSTLNRTASST*DEIIIHHIINS
Trigger: ACTGTTTATTATATGGTGGATGATGATTTCATCTCACGTGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAACACGCTGGCCCGGTaGCACAGCACCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGNTLAR*HSTRPR
Trigger: GCGGGGGCGGGTGCTGTGTCACCGGGCCAGCGTGTT...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGCGCCCAGCAGCACCATaGGGTCGCCGAGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKRPAAP*GRRASE
Trigger: CTCTGAAGCTCGGCGACCTCATGGTGCTGCTGGGCG...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGGTCCTCTTCATCTaGGCCACCCGGGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLQVLFI*ATRARL
Trigger: CAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTG...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCACTGCGGTGGTCAGCTaGCCCCGCAGGCGCCGGATC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELTAVVS*PRRRRI
Trigger: GATCCGGCGCCTGCGGGGCCAGCTGACCACCGCAGT...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGCATGGTGCCGGGGCTaGACAGCAGACAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLAWCRG*TADSSG
Trigger: ACCGGAGCTGTCTGCTGTCCAGCCCCGGCACCATGC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATGCCGTGGGTTCTGGGTaGAGTCCTCCACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDAVGSG*SPPPAA
Trigger: CGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGC...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGTGCTCTTCAGCCTGGTaGGCTCCTCGTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKCSSAW*APRHWP
Trigger: CGGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCA...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTAACACGCTGGCCCGGTaGCACAGCACCCGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPNTLAR*HSTRPR
Trigger: GCGGGGGCGGGTGCTGTGTCACCGGGCCAGCGTGTT...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGCCGGGCTCCGTCCGTCCTaGTCTGCCCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HEAHARWSRSHGDRLLPAGLRPS*SARSLV
Trigger: GACCAGCGAGCGGGCAGAGCAGGACGGACGGAGCCC...GGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGGGGCTCCGTCCGTCCTaGTCTGCCCGCTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQGLRPS*SARSLV
Trigger: GACCAGCGAGCGGGCAGAGCAGGACGGACGGAGCCC...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGTVTGC*QPSSPQ
Trigger: TTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGT...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCCTTGGCCACTCGCTaGGACATGGCCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELSLATR*DMATAA
Trigger: GGCCGCCGTGGCCATGTCCCAGCGAGTGGCCAAGGA...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGCTTGTGGCCGGGCTCTaGAGGGTGGGAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKLVAGL*RVGKPS
Trigger: GGAAGGCTTTCCCACCCTCCAGAGCCCGGCCACAAG...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGCCCGCGCCTTCTTaGCCCTGGCCCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLQPAPS*PWPLTS
Trigger: AGAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTG...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGAGGGCCGGGATCCACTaGACCTCCACGCTAGAGACG +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLRAGIH*TSTLET
Trigger: CGTCTCTAGCGTGGAGGTCCAGTGGATCCCGGCCCT...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGAAAATCCACCTCGATaGCGGGGAGCGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKENPPR*RGAASP
Trigger: TGGGCTGGCCGCTCCCCGCCATCGAGGTGGATTTTC...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCACCCCCGGGCCAGATaGCACGGGCGGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLHPRAR*HGRQHP
Trigger: AGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCGGCCTCCCGACTCCTTaGTCCTGCCTGGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELGLPTP*SCLGCS
Trigger: GGAGCACCCCAGGCAGGACCAAGGAGTCGGGAGGCC...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCCAGCCGGCACGGGCTaGCTGCTGGGTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLPAGTG*LLGAGA
Trigger: AGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGTCCGGCCCAGCGCAGTaGTGGGGCAGCTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLSGPAQ*WGSSAG
Trigger: ACCGGCTGAGCTGCCCCATCACTGCGCTGGGCCGGA...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAGAGCAGAATCCATTCTaGCAGCGCTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGEQNPF*QRWALG
Trigger: CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTC...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGCGACTAGGCCAGGGTaGGCGCTCCAGCGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LWGDICALTMEDRRQGPPATRPG*ALQRPD
Trigger: GTCCGGCCGCTGGAGCGCCCACCCTGGCCTAGTCGC...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGGCCCTGGGCAGTGGTaGGGCTGCAGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLGPGQW*GCSWRR
Trigger: CCTCCTCCAGCTGCAGCCCCACCACTGCCCAGGGCC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTCCACTCGCTGGGACATaGCCACGGCGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPPLAGT*PRRPLG
Trigger: GCCGAGTGGCCGCCGTGGCCATGTCCCAGCGAGTGG...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGTCGTCCTTTTCTTGTaGCCGGGCTCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKVVLFL*PGSGGW
Trigger: CCACCCTCCAGAGCCCGGCCACAAGAAAAGGACGAC...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAGGCTCACCTAACATCTaGGACGGCTGTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGGSPNI*DGCEAR
Trigger: CCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCC...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCTCCTCCTCCTCAGCTaGGGGCCAGCGGCGACGCTT +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLLLLLS*GPAATL
Trigger: AAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR TCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCACGGTCGCACGGTaGCAGGCTGCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLVTVAR*QAAASP
Trigger: AGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGAC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGTCGAGCTCTCATGGATaGGGGTTCCCAGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKSSSHG*GFPGLD
Trigger: GTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGA...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGCTGACCACAGGCAGATaGGATGCCCACTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKLTTGR*DAHSLL
Trigger: CAACAGGGAGTGGGCATCTCATCTGCCTGTGGTCAG...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGGTATGAGGCCAGCTTaGGGAAGACCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLGMRPA*GRPALP
Trigger: TGGAAGGGCAGGTCTTCCGCAAGCTGGCCTCATACC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATACGGTGACAGGCTGCTaGCAGCCCTCCAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDTVTGC*QPSSPQ
Trigger: TTGGGGACTGGAGGGCTGGCAGCAGCCTGTCACCGT...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATCTAGGAGGCCCTCCACGTaGCTCCTCGGCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TCLLGLLAGRAGKGLQRSRRPST*LLGLLA
Trigger: TGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCT...AGATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGACTCGTCACTGGCCGCTaGTCTGTCCAGCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGLVTGR*SVQLLK
Trigger: TTTGAGGAGCTGGACAGACCAGCGGCCAGTGACGAG...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGACCCTGCGGGCCAAGTaGTCCCCCAGGCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGTLRAK*SPRPAV
Trigger: GACGGCAGGCCTGGGGGACCACTTGGCCCGCAGGGT...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCAGCATCTCCTCGCTCTaGACCCTGCGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELSISSL*TLRAKW
Trigger: CCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCT...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGCGATATCGGGGTGCATaGCCTGTGGAAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKRYRGA*PVEATH
Trigger: GTGAGTGGCTTCCACAGGCCATGCACCCCGATATCG...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCCACCCCCGGGCCAGATaGCACGGGCGGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFHPRAR*HGRQHP
Trigger: AGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGAGAAGGCATGGAGCCTaGGGGCCCCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKNCRKEALHVPPRPSGRRRHGA*GPPARP
Trigger: GGGCCTGGCTGGGGGCCCCCAGGCTCCATGCCTTCT...CCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGCCTGCTGGCGCCCCTTaGTGTTGTAGCGCCGGCGCA +
Preference number: 4 (lower is better)
Translates to: GKNCRKEALHVPPRPSGRPAGAP*CCSAGA
Trigger: TGCGCCGGCGCTACAACATCAAGGGGCGCCAGCAGG...CCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR TCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGCGGTGTCCGCTTGTTaGAATGCACAGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKAVSAC*NAQSLG
Trigger: TCCCAGTGACTGTGCATTTCAACAAGCGGACACCGC...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGCCGCTCCCTGCCGTCTaGGAGCTGACCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRPLPAV*ELTTGR
Trigger: TCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGG...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATTTCAGAGAAGCCCCCTaGCCTGCCCAGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDFREAP*PAQVLF
Trigger: GAAGAGGACCTGGGCAGGGCAGGGGGCTTCTCTGAA...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGTGGTCCCCCAGGCCTaGCGTCACGATCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRVVPQA*RHDLSQ
Trigger: CTGCGACAGATCGTGACGGCAGGCCTGGGGGACCAC...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTGGTCCCCCAGGCCTaGCGTCACGATCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLVVPQA*RHDLSQ
Trigger: CTGCGACAGATCGTGACGGCAGGCCTGGGGGACCAC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGGGCGGGGAAGGGACTaGAGAGATCTCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLGRGRD*RDLQPC
Trigger: GCAGGGCTGGAGATCTCTGCAGTCCCTTCCCCGCCC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGCGGCGACGCTTCCGGTaGGCACCGCTGAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGRRRFR*APLRLL
Trigger: CAGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCG...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCTCCTTGGCCACTCGCTaGGACATGGCCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LWGDICALTMEDRRQGPPSLATR*DMATAA
Trigger: GGCCGCCGTGGCCATGTCCCAGCGAGTGGCCAAGGA...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATAAGAGCCGTGGGTTCTaGGTGAAGTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDKSRGF*VKSSTR
Trigger: GCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTT...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGGCGGGCAGCATCCGGTaGATCTTGCAGACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQAGSIR*ILQTFR
Trigger: CCGGAAGGTCTGCAAGATCCACCGGATGCTGCCCGC...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATGTCGTCCTTTTCTTGTaGCCGGGCTCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDVVLFL*PGSGGW
Trigger: CCACCCTCCAGAGCCCGGCCACAAGAAAAGGACGAC...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGTACAGCGGGAGCACGTaGAGCGGGAGGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRYSGST*SGREAS
Trigger: GGATGCCTCCCTCCCGCTCCACGTGCTCCCGCTGTA...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATACTGCGGTGGTCAGCTaGCCCCGCAGGCGCCGGATC +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDTAVVS*PRRRRI
Trigger: GATCCGGCGCCTGCGGGGCCAGCTGACCACCGCAGT...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGCCCGCGATAGAACACGCTaGCCCGGTGACACAGCACCC +
Preference number: 4 (lower is better)
Translates to: HEAHARWSRSHGDRLLPARDRTR*PGDTAP
Trigger: GGGTGCTGTGTCACCGGGCCAGCGTGTTCTATCGCG...GGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGCGGTCAATCCCCTCTaGAAAATCCACCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLAVNPL*KIHLDG
Trigger: GCCATCGAGGTGGATTTTCCAGAGGGGATTGACCGC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGAAGGCATGGAGCCTaGGGGCCCCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGRRHGA*GPPARP
Trigger: GGGCCTGGCTGGGGGCCCCCAGGCTCCATGCCTTCT...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCGTCCCTCTTTCTTGCTaGGGGACCTACCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELVPLSC*GTYPTL
Trigger: GAGGGTGGGGTAGGTCCCCCAGCAAGAAAGAGGGAC...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATTCTGTGCCCTCACCATaGAGGACAGAAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDSVPSP*RTEGRG
Trigger: GCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGA...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTCCCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCCAGCCGGCACGGGCTaGCTGCTGGGTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LPDSGEGRIAGRRPSTCLPAGTG*LLGAGA
Trigger: AGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGG...GAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGACGGCCACAGCCTCCATaGTTACTTGTTCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: QEGGPPRASSAFWQGGRGRPQPP*LLVLRR
Trigger: TCTCCGAAGAACAAGTAATCATGGAGGCTGTGGCCG...TCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTGTGGGAAAGCCTTCCTaGGCCTGCGGCACAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPVGKPS*ACGTAH
Trigger: ATGCGCTGTGCCGCAGGCTCAGGAAGGCTTTCCCAC...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGTGCTGGCCACGATGGTaGTGGCATAGGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRCWPRW*WHRAGS
Trigger: GCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCA...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGGTCACGGTCGCACGGTaGCAGGCTGCTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGVTVAR*QAAASP
Trigger: AGGGCTGGCAGCAGCCTGTCACCGTGCGACCGTGAC...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCACAAGGGAGACAAACTaGGGGCTCTGCAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELTRETN*GLCSPR
Trigger: ACGGGGACTGCAGAGCCCTCAGTTTGTCTCCCTTGT...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATGGTCCGGGGCCCGCCTaGTGGCGCCCCTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHGPGPA*WRPLML
Trigger: CAACATCAAGGGGCGCCAGCAGGCGGGCCCCGGACC...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR GCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCGGGCTGACTGCTGGGTaGTGGAGCTGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFGLTAG*WSWRQR
Trigger: CCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCC...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGCATGCACCTCAGCCTaGCCCGTCAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLACTSA*PVRNTR
Trigger: CCTGGTGTTCCTGACGGGGCAGGCTGAGGTGCATGC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGCTCAGCCGGTTCTCCTaGAGTTGCTTCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKLSRFS*SCFTLS
Trigger: AGAAAGGGTGAAGCAACTGCAGGAGAACCGGCTGAG...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCTCTCCGTACGGGGCTaGAGCCTGGCCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLLSVRG*SLAHVF
Trigger: GAAGACGTGGGCCAGGCTGCAGCCCCGTACGGAGAG...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCTCTCCGTACGGGGCTaGAGCCTGGCCCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLLSVRG*SLAHVF
Trigger: GAAGACGTGGGCCAGGCTGCAGCCCCGTACGGAGAG...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCCTGACTGCTGGGTGCTaGAGCTGGCGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LWGDICALTMEDRRQGPPLTAGC*SWRQRC
Trigger: GCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAG...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATGGCCCTGGGCAGTGGTaGGGCTGCAGCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHGPGQW*GCSWRR
Trigger: CCTCCTCCAGCTGCAGCCCCACCACTGCCCAGGGCC...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGCAGCATCCGGTaGATCTTGCAGACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRAGSIR*ILQTFR
Trigger: CCGGAAGGTCTGCAAGATCCACCGGATGCTGCCCGC...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGAGTGCCACGGGGAATGTaGCCATTGTCCGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRVPRGM*PLSGPA
Trigger: CGCTGGGCCGGACAATGGCCACATTCCCCGTGGCAC...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCCGATATCGGGGTGCATaGCCTGTGGAAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELRYRGA*PVEATH
Trigger: GTGAGTGGCTTCCACAGGCCATGCACCCCGATATCG...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGGGCCTCCCGACTCCTTaGTCCTGCCTGGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKGLPTP*SCLGCS
Trigger: GGAGCACCCCAGGCAGGACCAAGGAGTCGGGAGGCC...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGAGCCAGCGCTGGGCTCTaGGGAGACATCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRASAGL*GDICAL
Trigger: GAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGC...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGCCATTCTGCCAGCGCTaGGCTCTGGGGAGACATCTG +
Preference number: 4 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQPFCQR*ALGRHL
Trigger: CAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGG...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATGCCGTGGGTTCTGGGTaGAGTCCTCCACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHAVGSG*SPPPAA
Trigger: CGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGC...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGAGGAGGATACGCCAGTaGCGCGGTCGTAGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQRRIRQ*RGRSSV
Trigger: AACGCTACTACGACCGCGTCACTGGCGTATCCTCCT...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGCGCCCAGCAGCACCATaGGGTCGCCGAGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKRPAAP*GRRASE
Trigger: CTCTGAAGCTCGGCGACCTCATGGTGCTGCTGGGCG...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR TCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGCAGACAGCTCCGGTATaGGGCCAGCTTGCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRQTAPV*GQLAED
Trigger: GTCTTCCGCAAGCTGGCCTCATACCGGAGCTGTCTG...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCGCGGCATGGCAGCGGTaGCCAAGCACAGCCAACGTC +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFAAWQR*PSTANV
Trigger: GACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGC...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGCACCAGGATGCCACCTaGGGGCAGCATCCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGHQDAT*GQHPVD
Trigger: ATCCACCGGATGCTGCCCGCAGGTGGCATCCTGGTG...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCAGGGAGGCATCCGGCTaGTCACCTCCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LWGDICALTMEDRRQGPPREASG*SPPSCP
Trigger: CGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCT...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGAGGGAGGCATCCGGCTaGTCACCTCCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLREASG*SPPSCP
Trigger: CGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCT...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGTTAAAGACCTGTGCTTaGTTCTCTGGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLLKTCA*FSGASR
Trigger: TCTGCTGGCCCCAGAGAAGCAAGCACAGGTCTTTAA...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCCGTCCGTCCTGCTCTaGCCGCTCGCTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPAPSVLL*PLAGQL
Trigger: CAGCTGACCAGCGAGCGGGCAGAGCAGGACGGACGG...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCCGACTCCTTGGTCCTaGCTGGGGTGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVPTPWS*LGCSCP
Trigger: GGGACAGGAGCACCCCAGGCAGGACCAAGGAGTCGG...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGGCGCAGCTTCCCCATaGCGACTAGGCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AITQERRWRPPSQEGMEPGAASP*RLGQGG
Trigger: CCCACCCTGGCCTAGTCGCCATGGGGAAGCTGCGCC...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATGCAGAGGTGCCACGGTaGTCCCCACACCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDAEVPR*SPHQPQ
Trigger: CTGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGC...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGCTGGGTGCTGGAGCTaGCGGCAGAGGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAAGCWS*RQRCHG
Trigger: ACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGACTGAGGCACCTGTGTaGTCTTCCCGCTGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLTEAPV*SSRCRS
Trigger: AGACCGGCAGCGGGAAGACCACACAGGTGCCTCAGT...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGCTTGTGGCCGGGCTCTaGAGGGTGGGAAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GKNCRKEALHVPPRPSGRLVAGL*RVGKPS
Trigger: GGAAGGCTTTCCCACCCTCCAGAGCCCGGCCACAAG...CCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAACCCTGCGGGCCAAGTaGTCCCCCAGGCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETTLRAK*SPRPAV
Trigger: GACGGCAGGCCTGGGGGACCACTTGGCCCGCAGGGT...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGAGGACGGAGCTGGGGTaGATGAAGACAGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: RIAGRRPSTCLLGLLAGRRTELG*MKTGSS
Trigger: CGACGACCCTGTCTTCATCCACCCCAGCTCCGTCCT...CCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCGAAAATCCACCTCGATaGCGGGGAGCGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLENPPR*RGAASP
Trigger: TGGGCTGGCCGCTCCCCGCCATCGAGGTGGATTTTC...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATGCCAGCAAGGCTTCATaGCAGTCAGCCTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDASKAS*QSAFSA
Trigger: TGCAGAGAAGGCTGACTGCCATGAAGCCTTGCTGGC...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATGGGACAGGAGGCCGATaGGGATGTCCGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDGTGGR*GCPCTR
Trigger: GCGTGTACACGGACATCCTCATCGGCCTCCTGTCCC...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGCTCTTCAGCCTGGTaGGCTCCTCGTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFCSSAW*APRHWP
Trigger: CGGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCA...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGCCTTCCTCATCCACTTCTaGCTCCCTGTCCTCATCGCC +
Preference number: 4 (lower is better)
Translates to: HEAHARWSRSHGDRLLPAFLIHF*LPVLIA
Trigger: GGCGATGAGGACAGGGAGGCAGAAGTGGATGAGGAA...GGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGTTGCAGGGCACCCAGTaGGATCAACAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGLQGTQ*DQQLLG
Trigger: GCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAA...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATGCTTTCTGGGGCGGTTaGAGGGCACCCAGTGCGATC +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDAFWGG*RAPSAI
Trigger: GATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGC...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCTCTCGGTGGGCGGCTaGATCTTGGGATCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLLSVGG*ILGSTK
Trigger: CTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAG...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGTTCTCGATATCGGGGTaGATGGCCTGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQFSISG*MACGSH
Trigger: GTGGCTTCCACAGGCCATGCACCCCGATATCGAGAA...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGGCTAGGCGCATCCTCTaGGGCATGGCAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRARRIL*GMAAVT
Trigger: GGTCACCGCTGCCATGCCGCAGAGGATGCGCCTAGC...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGCCTGTCCCTCTTTCTTaGTGGGGGACCTACCCCACC +
Preference number: 4 (lower is better)
Translates to: GKNCRKEALHVPPRPSGRPVPLS*WGTYPT
Trigger: GGTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGG...CCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATCCGACTCCTTGGTCCTaGCTGGGGTGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHPTPWS*LGCSCP
Trigger: GGGACAGGAGCACCCCAGGCAGGACCAAGGAGTCGG...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGCTGGGTGCTGGAGCTaGCGGCAGAGGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSAGCWS*RQRCHG
Trigger: ACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGC...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCCCTCCGGGTGATTTCTaGAGGAGGAAACTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELPPGDF*RRKLLE
Trigger: TTCGAGCAGTTTCCTCCTCCAGAAATCACCCGGAGG...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGACTGGGGTGTGCAGCTaGCATACTCACAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLTGVCS*HTHRLP
Trigger: TGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGT...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGTGGGCGGCTGCATCTTaGGATCCACGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLWAAAS*DPRRAQ
Trigger: CTGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCA...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTGCAGTATGTAGGGGCTaGTTCCTCCAGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPAVCRG*FLQGLV
Trigger: GACAAGCCCCTGGAGGAACCAGCCCCTACATACTGC...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGCATGGTGCCGGGGCTaGACAGCAGACAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAAWCRG*TADSSG
Trigger: ACCGGAGCTGTCTGCTGTCCAGCCCCGGCACCATGC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGTACGGGGCTGCAGCCTaGCCCACGTCTTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKYGAAA*PTSSAW
Trigger: CCATGCTGAAGACGTGGGCCAGGCTGCAGCCCCGTA...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGGGGGTGCATGGCCTGTaGAAGCCACTCACAGTACTC +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLGVHGL*KPLTVL
Trigger: GAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCC...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGGGATCGAGCTCTCATaGATGAGGGTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLGIELS*MRVPRA
Trigger: AGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCC...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGTCTGTGCCCTCACCATaGAGGACAGAAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLSVPSP*RTEGRG
Trigger: GCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGA...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTCCCACCCCCTGGCCCTaGTCAAACTCACATTTGGGG +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGPTPWP*SNSHLG
Trigger: CCCCAAATGTGAGTTTGACCAGGGCCAGGGGGTGGG...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGCTGGCCAGCAGCCGTaGGGCCAGATCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSAGQQP*GQILLP
Trigger: TGGCAGAAGGATCTGGCCCCACGGCTGCTGGCCAGC...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR TCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGGGACAGGAGGCCGATaGGGATGTCCGTGTACACGC +
Preference number: 4 (lower is better)
Translates to: AITQERRWRPPSQEGMEPGTGGR*GCPCTR
Trigger: GCGTGTACACGGACATCCTCATCGGCCTCCTGTCCC...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGTGGGAAAGCCTTCCTaGGCCTGCGGCACAGCGCAT +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAVGKPS*ACGTAH
Trigger: ATGCGCTGTGCCGCAGGCTCAGGAAGGCTTTCCCAC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATCCTGGGAGACCCAGGTaGCACGGAAGGAGGATACGC +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHPGRPR*HGRRIR
Trigger: GCGTATCCTCCTTCCGTGTCACCTGGGTCTCCCAGG...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCGGAGCTGGGGTGGATaGAGACAGGGTCGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RALMDEGSQGLTHFLRAGRSWGG*RQGRRG
Trigger: TCCTCGACGACCCTGTCTTCATCCACCCCAGCTCCG...GCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGTCGAGCTCTCATGGATaGGGGTTCCCAGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGSSSHG*GFPGLD
Trigger: GTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGA...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCACAGCGTCCAGCACGTaGGATGAAATCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: HPRARWHGRQHPSYGIELTASST*DEIIIH
Trigger: GTGGATGATGATTTCATCTCACGTGCTGGACGCTGT...GAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACACCGCTCCCTGCCGTCTaGGAGCTGACCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETPLPAV*ELTTGR
Trigger: TCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGG...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGGCGGCATGGCAGCGGTaGCCAAGCACAGCCAACGTC +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMEAAWQR*PSTANV
Trigger: GACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGC...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGGTGTGGTCTTCCCGCTaGCGGTCTCACCACACACGA +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMVWSSR*RSHHTR
Trigger: TCGTGTGTGGTGAGACCGGCAGCGGGAAGACCACAC...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTCAGGAACACCAGGATaGCACCTGCGGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFSGTPG*HLRAAS
Trigger: GGATGCTGCCCGCAGGTGGCATCCTGGTGTTCCTGA...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGTCAGGAACACCAGGATaGCACCTGCGGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKSGTPG*HLRAAS
Trigger: GGATGCTGCCCGCAGGTGGCATCCTGGTGTTCCTGA...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR GCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATGCTTTCTGGGGCGGTTaGAGGGCACCCAGTGCGATC +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHAFWGG*RAPSAI
Trigger: GATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGC...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGCTTAGCGTAGCGGGGTaGCACGGGGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMLSVAG*HGECGH
Trigger: ATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAG...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGACGTCTTCAGCATGGTaGCGGGGCTGGACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMTSSAW*RGWTAD
Trigger: GTCTGCTGTCCAGCCCCGGCACCATGCTGAAGACGT...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGGGCGGGGAAGGGACTaGAGAGATCTCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETGRGRD*RDLQPC
Trigger: GCAGGGCTGGAGATCTCTGCAGTCCCTTCCCCGCCC...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTAGGAGGCCCTCCACGTaGCTCCTCGGCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSRRPST*LLGLLA
Trigger: TGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCT...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGGCTAGGCGCATCCTCTaGGGCATGGCAGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMEARRIL*GMAAVT
Trigger: GGTCACCGCTGCCATGCCGCAGAGGATGCGCCTAGC...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGGGGGCCAGATCCTTCTaGCAAGCCAGGGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRGARSF*QARADR
Trigger: ACGGTCAGCCCTGGCTTGGCAGAAGGATCTGGCCCC...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGAAGAGCCGTGGGTTCTaGGTGAAGTCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKKSRGF*VKSSTR
Trigger: GCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTT...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATCAGCCCGCGCCTTCTTaGCCCTGGCCCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHQPAPS*PWPLTS
Trigger: AGAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTG...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTTACAGCGGGAGCACGTaGAGCGGGAGGGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARAYSGST*SGREAS
Trigger: GGATGCCTCCCTCCCGCTCCACGTGCTCCCGCTGTA...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGCCGAGTCCCCTCCGGTaGAGGCTTAAAGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGPSPLR*RLKDLC
Trigger: GCACAGGTCTTTAAGCCTCCACCGGAGGGGACTCGG...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTAGCATCTCCTCGCTCTaGACCCTGCGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AITQERRWRPPSQEGMEPSISSL*TLRAKW
Trigger: CCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCT...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGGACGGAGCTGGGGTaGATGAAGACAGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGRTELG*MKTGSS
Trigger: CGACGACCCTGTCTTCATCCACCCCAGCTCCGTCCT...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATAGGGCCGGGATCCACTaGACCTCCACGCTAGAGACG +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHRAGIH*TSTLET
Trigger: CGTCTCTAGCGTGGAGGTCCAGTGGATCCCGGCCCT...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTGCGGTCAATCCCCTCTaGAAAATCCACCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPAVNPL*KIHLDG
Trigger: GCCATCGAGGTGGATTTTCCAGAGGGGATTGACCGC...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTTACGGGGCTGCAGCCTaGCCCACGTCTTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AITQERRWRPPSQEGMEPYGAAA*PTSSAW
Trigger: CCATGCTGAAGACGTGGGCCAGGCTGCAGCCCCGTA...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGGTCAGTGGACAGTGGTaGGGGGCCAGGCTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKVSGQW*GARLSR
Trigger: TCGAGAAAGCCTGGCCCCCCACCACTGTCCACTGAC...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCGAAGCCCATGCCAGGTaGTCACGGTCGCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPAEAHAR*SRSHGD
Trigger: GTCACCGTGCGACCGTGACCACCTGGCATGGGCTTC...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGGGATCGAGCTCTCATaGATGAGGGTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGGIELS*MRVPRA
Trigger: AGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCC...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGGCCAGCGCTGGGCTCTaGGGAGACATCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMEASAGL*GDICAL
Trigger: GAGGGCACAGATGTCTCCCCAGAGCCCAGCGCTGGC...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCATCTCACCACACACGATaGCGATGGGGTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGASHHTR*RWGARP
Trigger: TGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGA...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GACAAACTGAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGTCCGGCCCAGCGCAGTaGTGGGGCAGCTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: DKLRALQSPFKANIIVVWSGPAQ*WGSSAG
Trigger: ACCGGCTGAGCTGCCCCATCACTGCGCTGGGCCGGA...CCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTCAGTTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCGGAGCTGGGGTGGATaGAGACAGGGTCGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMERSWGG*RQGRRG
Trigger: TCCTCGACGACCCTGTCTTCATCCACCCCAGCTCCG...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGCTGACCACAGGCAGATaGGATGCCCACTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMLTTGR*DAHSLL
Trigger: CAACAGGGAGTGGGCATCTCATCTGCCTGTGGTCAG...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGCTGCCAAGCCAGGGCTaGCCGTGCACAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKLPSQG*PCTKHK
Trigger: TTTGTGCTTTGTGCACGGTCAGCCCTGGCTTGGCAG...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR GCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAACGATGACGATGGGGTaGTCGGCCACAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGATMTMG*SATASM
Trigger: CATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGT...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGGCATCCGGTGGATCTTaGAGACCTTCCGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLASGGS*RPSGST
Trigger: AGTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGC...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGAGGCTTAAAGACCTGTaGTTGCTTCTCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLRLKDL*LLLWGQ
Trigger: CTGGCCCCAGAGAAGCAAGCACAGGTCTTTAAGCCT...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGTTGCTTCACCCTTTCTaGTTTCTGGGGCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLLLHPF*FLGRLQ
Trigger: CTGCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAA...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCGCAGTCAGCCTTCTCTaGAACCAGGGCTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVAVSLL*NQGSQK
Trigger: CTTCTGCGAGCCCTGGTTGCAGAGAAGGCTGACTGC...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTTTCTCGATATCGGGGTaGATGGCCTGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGFSISG*MACGSH
Trigger: GTGGCTTCCACAGGCCATGCACCCCGATATCGAGAA...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAAGGCCACGAAGCCCATaGCAGGTGGTCACGGTCGCA +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETRPRSP*QVVTVA
Trigger: TGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCT...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCACAGGCAGATGAGATaGCCACTCCCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLHRQMR*PLPVAI
Trigger: TATGGCAACAGGGAGTGGGCATCTCATCTGCCTGTG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTGTCAGCTCCGCTCCCTaGCGTCTGAGAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARAVSSAP*RLRADH
Trigger: GTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGAC...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACGTCAGCTCCGCTCCCTaGCGTCTGAGAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: RSKARSRIHSASAGLWGDVSSAP*RLRADH
Trigger: GTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGAC...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATCCTGTCCCTCTTTCTTaGTGGGGGACCTACCCCACC +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHPVPLS*WGTYPT
Trigger: GGTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGG...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGAGCAGAATCCATTCTaGCAGCGCTGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSEQNPF*QRWALG
Trigger: CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTC...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCGAAACCCAGCCCACGTaGGTTCCCAGACCACCAACT +
Preference number: 4 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVETQPT*VPRPPT
Trigger: AGTTGGTGGTCTGGGAACCCACGTGGGCTGGGTTTC...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp CACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGCCCGTCAGCCTTCTCTTTaGTGTGATACATGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: HEAHARWSRSHGDRLLPARQPSL*CDTCGS
Trigger: GGAACCGCATGTATCACACCAAAGAGAAGGCTGACG...GGCTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCCACTCGCTGGGACATaGCCACGGCGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRPLAGT*PRRPLG
Trigger: GCCGAGTGGCCGCCGTGGCCATGTCCCAGCGAGTGG...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGAGCAGGAAGTCCTTCTaGATTTCTTTAAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKSRKSF*ISLSST
Trigger: TGTGCTGCTTAAAGAAATCCAGAAGGACTTCCTGCT...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGATGAGCAGCTTGAGTaGCAGGTTCCTCTTAGCCCG +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGDEQLE*QVPLSP
Trigger: CGGGCTAAGAGGAACCTGCCACTCAAGCTGCTCATC...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTCCGAGTCCCCTCCGGTaGAGGCTTAAAGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSPSPLR*RLKDLC
Trigger: GCACAGGTCTTTAAGCCTCCACCGGAGGGGACTCGG...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTACGTCTCGGCCACATTaGTGGCCACAACACACAACC +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGTSRPH*WPQHTT
Trigger: GGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGT...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGTCAACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGTGCCACGGGGAATGTaGCCATTGTCCGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RSTQSSVAHLTSGTAVRPVPRGM*PLSGPA
Trigger: CGCTGGGCCGGACAATGGCCACATTCCCCGTGGCAC...TGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATCTCGTCACTGGCCGCTaGTCTGTCCAGCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDLVTGR*SVQLLK
Trigger: TTTGAGGAGCTGGACAGACCAGCGGCCAGTGACGAG...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCATGGGCGGCTGCATCTTaGGATCCACGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EGRIAGRRPSTCLLGLLAWAAAS*DPRRAQ
Trigger: CTGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCA...TGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACGAAGCCCATGCCAGGTaGTCACGGTCGCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSKARSRIHSASAGLWGDEAHAR*SRSHGD
Trigger: GTCACCGTGCGACCGTGACCACCTGGCATGGGCTTC...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGGCTCACCTAACATCTaGGACGGCTGTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSGSPNI*DGCEAR
Trigger: CCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCC...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
3UTR CAA 72 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCAGGCCACGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RDRALMDEGSQG*THFLRAGHEAH
Trigger: ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
3UTR CAA 72 bp ATGCCCACTCCCTGTTGCCATAACACAGGAAAGGCGTaGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MPTPCCHNTGKA*AATLPRRHGAW
Trigger: CCAGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTTCTCACCACACACGATaGCGATGGGGTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSSHHTR*RWGARP
Trigger: TGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGA...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGGCGGTGTCCGCTTGTTaGAATGCACAGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGAVSAC*NAQSLG
Trigger: TCCCAGTGACTGTGCATTTCAACAAGCGGACACCGC...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCTTGGCCCTGGCCCTTaGCTTCTTAAACTTCCGCAT +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLLGPGP*LLKLPH
Trigger: ATGCGGAAGTTTAAGAAGTCAAGGGCCAGGGCCAAG...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGGTCAACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCATGCTGGCCACGATGGTaGTGGCATAGGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSTQSSVAHLTSGTAVRPCWPRW*WHRAGS
Trigger: GCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCA...TGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGTCCAAAGAGCACACTaGACAGAACAGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGVQRAH*TEQRPA
Trigger: TGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGGAC...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCACTGCCGTCTGAGAGCTaGCCACAGGCAGATGAGATG +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGALPSES*PQADEM
Trigger: CATCTCATCTGCCTGTGGTCAGCTCTCAGACGGCAG...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAAGCCCCTGCCTCAGTaGCCCCATCCTGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: RSKARSRIHSASAGLWGDKPLPQ*PHPVYS
Trigger: GGAGTAGACAGGATGGGGTCACTGAGGCAGGGGCTT...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGAACGAGCGCGTTGCTTaGATCAACTCCCTTCAACGT +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLNERVA*INSLQR
Trigger: ACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTT...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTGTGTGGTCTTCCCGCTaGCGGTCTCACCACACACGA +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSVWSSR*RSHHTR
Trigger: TCGTGTGTGGTGAGACCGGCAGCGGGAAGACCACAC...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGCATGCACCTCAGCCTaGCCCGTCAGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: DRALMDEGSQGLTHFLRAACTSA*PVRNTR
Trigger: CCTGGTGTTCCTGACGGGGCAGGCTGAGGTGCATGC...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGCGGTTCTCCTGCAGTTaGTTCACCCTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: AASPPVPKPVLGPAARFLRFSCS*FTLSAF
Trigger: GAAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCG...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTAGCTTGCGGAAGACCTaGCCTTCCAGCAGGAACCGG +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARASLRKT*PSSRNR
Trigger: CCGGTTCCTGCTGGAAGGGCAGGTCTTCCGCAAGCT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTACGTCTTCAGCATGGTaGCGGGGCTGGACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSTSSAW*RGWTAD
Trigger: GTCTGCTGTCCAGCCCCGGCACCATGCTGAAGACGT...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTGCAGTCAGCCTTCTCTaGAACCAGGGCTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSAVSLL*NQGSQK
Trigger: CTTCTGCGAGCCCTGGTTGCAGAGAAGGCTGACTGC...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTACCAGTCCTCGGCCCTaGAGCCAGGTTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSTSPRP*SQVSGQ
Trigger: CTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGT...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGACCAGTCCTCGGCCCTaGAGCCAGGTTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMETSPRP*SQVSGQ
Trigger: CTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGT...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTCACAGGCAGATGAGATaGCCACTCCCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGHRQMR*PLPVAI
Trigger: TATGGCAACAGGGAGTGGGCATCTCATCTGCCTGTG...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCTGGGGAGACATCTGTaGCCTCACCATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPALGRHL*PHHGGQ
Trigger: CTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTCTGGGGAGACATCTGTaGCCTCACCATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSLGRHL*PHHGGQ
Trigger: CTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTCTACTGATCTTCTCCTaGCCCGGGGCTACCACCTCG +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSLLIFS*PGATTS
Trigger: CGAGGTGGTAGCCCCGGGCCAGGAGAAGATCAGTAG...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCATGGTGGGGCTGCAGCTaGAGGAGGAGGAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAWWGCS*RRRNSH
Trigger: ATGACTGTTCCTCCTCCTCCAGCTGCAGCCCCACCA...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTTTCTTCGGAGAGAATTaGGAGCTTCAGCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPFFGEN*ELQPFL
Trigger: GAGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAA...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTACTGAGGCACCTGTGTaGTCTTCCCGCTGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARATEAPV*SSRCRS
Trigger: AGACCGGCAGCGGGAAGACCACACAGGTGCCTCAGT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGAGATGAGCAGCTTGAGTaGCAGGTTCCTCTTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PPVPKPVLGPAARFLVSGDEQLE*QVPLSP
Trigger: CGGGCTAAGAGGAACCTGCCACTCAAGCTGCTCATC...TCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTCTTGGCGAAGAGCCGTaGGTTCTGGGTGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSLGEEP*VLGEVL
Trigger: GAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAG...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAACCCTTTCTGCTTTCTaGGGCGGTTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: RDRALMDEGSQGLTHFLRTLSAF*GGCRAP
Trigger: GGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGGGT...TCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCTGTACCGCAGCCCGTTaGCTTCGCAAAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPACTAAR*LRKTGV
Trigger: CACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACA...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATTGTACCGCAGCCCGTTaGCTTCGCAAAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHCTAAR*LRKTGV
Trigger: CACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACA...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACGTCCCTCTTTCTTGCTaGGGGACCTACCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RSKARSRIHSASAGLWGDVPLSC*GTYPTL
Trigger: GAGGGTGGGGTAGGTCCCCCAGCAAGAAAGAGGGAC...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTCCATTCTGCCAGCGCTaGGCTCTGGGGAGACATCTG +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARAPFCQR*ALGRHL
Trigger: CAGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGG...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGTCTACTCCCACCCCCTaGCCCTGGTCAAACTCACAT +
Preference number: 4 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGSTPTP*PWSNSH
Trigger: ATGTGAGTTTGACCAGGGCCAGGGGGTGGGAGTAGA...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR TCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCCGGCCACAGCCTCCATaGTTACTTGTTCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFRPQPP*LLVLRR
Trigger: TCTCCGAAGAACAAGTAATCATGGAGGCTGTGGCCG...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAAGGAGGATACGCCAGTaGCGCGGTCGTAGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETRRIRQ*RGRSSV
Trigger: AACGCTACTACGACCGCGTCACTGGCGTATCCTCCT...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCGTCCAAAGAGCACACTaGACAGAACAGCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVVQRAH*TEQRPA
Trigger: TGCTGGACGCTGTTCTGTTCAGTGTGCTCTTTGGAC...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTCTGCCGTCTGAGAGCTaGCCACAGGCAGATGAGATG +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARALPSES*PQADEM
Trigger: CATCTCATCTGCCTGTGGTCAGCTCTCAGACGGCAG...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTACAAGGGAGACAAACTaGGGGCTCTGCAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARATRETN*GLCSPR
Trigger: ACGGGGACTGCAGAGCCCTCAGTTTGTCTCCCTTGT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTACAGTCACTGGGAACTaGCTGGATTCCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGTVTGN*LDSTLM
Trigger: CATCAAGGTGGAATCCAGGCAGTTCCCAGTGACTGT...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATTTCCTCATCCACTTCTaGCTCCCTGTCCTCATCGCC +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHFLIHF*LPVLIA
Trigger: GGCGATGAGGACAGGGAGGCAGAAGTGGATGAGGAA...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGTGTTGTCGGCTCAGTaGCAGCATCTTAGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAVLSAQ*QHLSVA
Trigger: CGCTACGCTAAGATGCTGGCACTGAGCCGACAACAC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTCCCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCGTGTTGTCGGCTCAGTaGCAGCATCTTAGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: LPDSGEGRIAGRRPSTCLVLSAQ*QHLSVA
Trigger: CGCTACGCTAAGATGCTGGCACTGAGCCGACAACAC...GAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGCGCAAAACTGGGGTGTaGAGCTGGCATACTCACAGG +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRRKTGV*SWHTHR
Trigger: CCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCG...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTGGTATGAGGCCAGCTTaGGGAAGACCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSGMRPA*GRPALP
Trigger: TGGAAGGGCAGGTCTTCCGCAAGCTGGCCTCATACC...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATATGCCCACTCCCTGTTaGCATAACACAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDMPTPC*HNTGKA
Trigger: CGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCAT...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGATGGTCCTGCCTGGGGTaGTCCTGTCCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RDRALMDEGSQGLTHFLRWSCLG*SCPSFL
Trigger: CAAGAAAGAGGGACAGGAGCACCCCAGGCAGGACCA...TCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GACAAACTGAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCTGACTGCTGGGTGCTaGAGCTGGCGGCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DKLRALQSPFKANIIVVWLTAGC*SWRQRC
Trigger: GCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAG...CCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTCAGTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTTGGTGGGGCTGCAGCTaGAGGAGGAGGAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARAWWGCS*RRRNSH
Trigger: ATGACTGTTCCTCCTCCTCCAGCTGCAGCCCCACCA...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGTTCTTCGGAGAGAATTaGGAGCTTCAGCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLFFGEN*ELQPFL
Trigger: GAGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAA...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTTACACGCTCCTCTCGTaGGCCTCGTCGATGATCACC +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSYTLLS*ASSMIT
Trigger: GGTGATCATCGACGAGGCCCACGAGAGGAGCGTGTA...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATCTGTGCTTGCTTCTCTaGGGCCAGCAGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHLCLLL*GQQRVQ
Trigger: CTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACAG...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAACCCTTTCTGCTTTCTaGGGCGGTTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: DRALMDEGSQGLTHFLRATLSAF*GGCRAP
Trigger: GGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGGGT...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATACGGGATTTGGCTTCGCAAAACTaGGGTGTGCAGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: KKSPPGQMARAAAPFIRDLASQN*GVQLAY
Trigger: GTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAA...ATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTTGGCTTCGCAAAACTaGGGTGTGCAGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFLASQN*GVQLAY
Trigger: GTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAA...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCCGGATCTCCATCATaGCTTTGTACCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RDRALMDEGSQGLTHFLRAGSPS*LCTAAR
Trigger: ACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGC...TCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGCAGTATGTAGGGGCTaGTTCCTCCAGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETAVCRG*FLQGLV
Trigger: GACAAGCCCCTGGAGGAACCAGCCCCTACATACTGC...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGTGCATGGCCTGTaGAAGCCACTCACAGTACTC +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSGVHGL*KPLTVL
Trigger: GAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCC...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTGGGACTCTCCTCAGGTaGCAAAAAGCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARAGTLLR*QKAGQQ
Trigger: CTGCTGGCCAGCTTTTTGCCACCTGAGGAGAGTCCC...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR TCA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGTGCTGTCTTCACTGCTaGAGCCTGCTTCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLCCLHC*SLLHRE
Trigger: TTCTCTATGAAGCAGGCTTCAGCAGTGAAGACAGCA...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGCTTGGCCCTGGCCCTTaGCTTCTTAAACTTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRLGPGP*LLKLPH
Trigger: ATGCGGAAGTTTAAGAAGTCAAGGGCCAGGGCCAAG...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTCAACAGGCCTCCGGGTaGTTTCTGGAGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: EAAEAKPGAESILPALGSQQASG*FLEEET
Trigger: AGTTTCCTCCTCCAGAAATCACCCGGAGGCCTGTTG...AGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCAACAGGCCTCCGGGTaGTTTCTGGAGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMEQQASG*FLEEET
Trigger: AGTTTCCTCCTCCAGAAATCACCCGGAGGCCTGTTG...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTGCATCCGGTGGATCTTaGAGACCTTCCGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSASGGS*RPSGST
Trigger: AGTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGC...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCACCAGGATGCCACCTaGGGGCAGCATCCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRHQDAT*GQHPVD
Trigger: ATCCACCGGATGCTGCCCGCAGGTGGCATCCTGGTG...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCAGGCTTAAAGACCTGTaGTTGCTTCTCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPARLKDL*LLLWGQ
Trigger: CTGGCCCCAGAGAAGCAAGCACAGGTCTTTAAGCCT...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTTCTGGAGGAGGAAACTaGTCGAAGTCACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGSGGGN*SKSPKT
Trigger: GGTTTTTGGTGACTTCGAGCAGTTTCCTCCTCCAGA...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATTTGCTTCACCCTTTCTaGTTTCTGGGGCGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHLLHPF*FLGRLQ
Trigger: CTGCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAA...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTCGCAAAACTGGGGTGTaGAGCTGGCATACTCACAGG +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSRKTGV*SWHTHR
Trigger: CCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCG...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTATGCCCACTCCCTGTTaGCATAACACAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSMPTPC*HNTGKA
Trigger: CGCCTTTCCTGTGTTATGGCAACAGGGAGTGGGCAT...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTAGCATCTCTGCTCGCTaGCTCTTTTTCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGSISAR*LFFSFC
Trigger: ACAGAAGGAGAAAAAGAGCCAGCGAGCAGAGATGCT...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAACGTCTCGGCCACATTaGTGGCCACAACACACAACC +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETTSRPH*WPQHTT
Trigger: GGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGT...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGTGCTGTCTTCACTGCTaGAGCCTGCTTCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMCCLHC*SLLHRE
Trigger: TTCTCTATGAAGCAGGCTTCAGCAGTGAAGACAGCA...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCTCCACCGAGTCTTTCTaGTCGTCGTCCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVSTESF*SSSFSC
Trigger: ACAAGAAAAGGACGACGATCAGAAAGACTCGGTGGA...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATAGTAATGATCCAAGTTaGTCTGGGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHSNDPS*SGAAPQ
Trigger: CTGAGGTGCTGCCCCAGATCAACTTGGATCATTACT...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTCCCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCGTAGAACGAGCGCGTTaGTTGCATCAACTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPDSGEGRIAGRRPSTCLVERAR*LHQLPS
Trigger: TGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTAC...GAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR GCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGACATGCGGTTCCCAGTaGCTAGCTTGGAAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRTCGSQ*LAWKWY
Trigger: ATACCACTTCCAAGCTAGGCACTGGGAACCGCATGT...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGGGGCTGACTGCTGGGTaGTGGAGCTGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARGLTAG*WSWRQR
Trigger: CCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCC...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCCTGTCCGCTTGTTGAAATaGACAGTCACTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AITQERRWRPPSQEGMEPVRLLK*TVTGNC
Trigger: GCAGTTCCCAGTGACTGTGCATTTCAACAAGCGGAC...AGGCTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTGCTCACCTCCATCTTaGCCGCCATCCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHCSPPS*PPSPRS
Trigger: GGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCA...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGCCAACGTCAGCTCCGCTCCCTGCCGTCTGAGAGCTGACCACAGGCAGATGTCTGGAGGAGGAAACTaGTCGAAGTCACCAAAAACC +
Preference number: 4 (lower is better)
Translates to: TANVSSAPCRLRADHRQMSGGGN*SKSPKT
Trigger: GGTTTTTGGTGACTTCGAGCAGTTTCCTCCTCCAGA...CATCTGCCTGTGGTCAGCTCTCAGACGGCAGGGAGCGGAGCTGACGTTGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATCGGTTCTCCTGCAGTTaGTTCACCCTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHRFSCS*FTLSAF
Trigger: GAAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCG...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGTTCAGAGAAGCCCCCTaGCCTGCCCAGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRFREAP*PAQVLF
Trigger: GAAGAGGACCTGGGCAGGGCAGGGGGCTTCTCTGAA...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATAGGCCACGAAGCCCATaGCAGGTGGTCACGGTCGCA +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHRPRSP*QVVTVA
Trigger: TGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCT...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAACAGATTCATCTCCTTaGCCACTCGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: RDRALMDEGSQGLTHFLRTDSSP*PLAGTW
Trigger: CCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGT...TCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATCGCGATAGAACACGCTaGCCCGGTGACACAGCACCC +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHRDRTR*PGDTAP
Trigger: GGGTGCTGTGTCACCGGGCCAGCGTGTTCTATCGCG...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGCCAGCAAGGCTTCATaGCAGTCAGCCTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DRALMDEGSQGLTHFLRAASKAS*QSAFSA
Trigger: TGCAGAGAAGGCTGACTGCCATGAAGCCTTGCTGGC...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTAGTAATGATCCAAGTTaGTCTGGGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSSNDPS*SGAAPQ
Trigger: CTGAGGTGCTGCCCCAGATCAACTTGGATCATTACT...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CTCCCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCACCAAAAACCGCAGATaGATACAGCCTGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPDSGEGRIAGRRPSTCLTKNRR*IQPVAV
Trigger: CACTGCTACAGGCTGTATTCATCTGCGGTTTTTGGT...GAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GACAAACTGAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGACTCGGGGAGCTCTTTaGAAAGGACGGAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DKLRALQSPFKANIIVVWTRGAL*KGRSWG
Trigger: ACCCCAGCTCCGTCCTTTTCAAAGAGCTCCCCGAGT...CCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTACAGCGTCCAGCACGTaGGATGAAATCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARATASST*DEIIIH
Trigger: GTGGATGATGATTTCATCTCACGTGCTGGACGCTGT...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATACGATGACGATGGGGTaGTCGGCCACAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHTMTMG*SATASM
Trigger: CATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGT...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTTCACTGCTGAAGCCTaGTTCATAGAGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEREELQEGGPPRASSAFFTAEA*FIEKLR
Trigger: CCTCAGTTTCTCTATGAAGCAGGCTTCAGCAGTGAA...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GGCTTTCTCGATATCGGGGTGCATGGCCTGTGGAAGCCACTCACAGTACTCAGCCTCAGCCGGTTCTCCTaGAGTTGCTTCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GFLDIGVHGLWKPLTVLSLSRFS*SCFTLS
Trigger: AGAAAGGGTGAAGCAACTGCAGGAGAACCGGCTGAG...GCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp GCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATCTTCAGCTTCGGAAGCCTaGACTTCACTCAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AKPGAESILPALGSGETSSASEA*TSLSFC
Trigger: ACAGAAGCTGAGTGAAGTCCAGGCTTCCGAAGCTGA...AGATGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCCGGCTCAGCAGCTaGGTCCTCGTCCAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARSRLSS*VLVQLR
Trigger: TCGGAGCTGGACGAGGACCCAGCTGCTGAGCCGGCT...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp GGCTTTCTCGATATCGGGGTGCATGGCCTGTGGAAGCCACTCACAGTACTCAGCACAGATTCATCTCCTTaGCCACTCGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: GFLDIGVHGLWKPLTVLSTDSSP*PLAGTW
Trigger: CCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGT...GCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGTACACGCTCCTCTCGTaGGCCTCGTCGATGATCACC +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRYTLLS*ASSMIT
Trigger: GGTGATCATCGACGAGGCCCACGAGAGGAGCGTGTA...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCACCTCCGGGTGATTTCTaGAGGAGGAAACTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: DRALMDEGSQGLTHFLRAPPGDF*RRKLLE
Trigger: TTCGAGCAGTTTCCTCCTCCAGAAATCACCCGGAGG...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGCAGGTCCTCTTCATCTaGGCCACCCGGGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARQVLFI*ATRARL
Trigger: CAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTG...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATCAGCCAGCAGGTATTTaGGGTTTTTCTTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHQPAGI*GFSSKQ
Trigger: CTGCTTGGAAGAAAAACCCCAAATACCTGCTGGCTG...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATGTCAGTGGACAGTGGTaGGGGGCCAGGCTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHVSGQW*GARLSR
Trigger: TCGAGAAAGCCTGGCCCCCCACCACTGTCCACTGAC...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGACCAAAAACCGCAGATaGATACAGCCTGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VAITQERRWRPPSQEGMETKNRR*IQPVAV
Trigger: CACTGCTACAGGCTGTATTCATCTGCGGTTTTTGGT...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTTTGAGCGCCTTCATTTaGAGGATTAAGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGLSAFI*RIKSST
Trigger: TGTTGAAGACTTAATCCTTCAAATGAAGGCGCTCAA...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AGATGGCACGGGCGGCAGCACCCTTCATACGGGATCGAGCTCTCATGGATGAGGGTCCAGCACGTGAGATaGAATCATCATCCACCATAT +
Preference number: 4 (lower is better)
Translates to: RWHGRQHPSYGIELSWMRVQHVR*NHHPPY
Trigger: ATATGGTGGATGATGATTTCATCTCACGTGCTGGAC...CCTCATCCATGAGAGCTCGATCCCGTATGAAGGGTGCTGCCGCCCGTGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCTTCACTGCTGAAGCCTaGTTCATAGAGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPAFTAEA*FIEKLR
Trigger: CCTCAGTTTCTCTATGAAGCAGGCTTCAGCAGTGAA...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GGCTTTCTCGATATCGGGGTGCATGGCCTGTGGAAGCCACTCACAGTACTCAGCGTCCGCTTGTTGAAATaGACAGTCACTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GFLDIGVHGLWKPLTVLSVRLLK*TVTGNC
Trigger: GCAGTTCCCAGTGACTGTGCATTTCAACAAGCGGAC...GCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGTGCTCACCTCCATCTTaGCCGCCATCCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARCSPPS*PPSPRS
Trigger: GGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCA...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTGGTCCTGCCTGGGGTaGTCCTGTCCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHWSCLG*SCPSFL
Trigger: CAAGAAAGAGGGACAGGAGCACCCCAGGCAGGACCA...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATACACAGGAAAGGCGTTaGCGGCCACCCTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHTQERR*RPPSQE
Trigger: TTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGT...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGCAGGTGGCAAAAAGCTaGCCAGCAGCCGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARQVAKS*PAAVGP
Trigger: TGGCCCCACGGCTGCTGGCCAGCTTTTTGCCACCTG...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR TCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGGCCTTCTCTTTGGTGTaGTACATGCGGTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRAFSLV*YMRFPV
Trigger: CACTGGGAACCGCATGTATCACACCAAAGAGAAGGC...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR TCA 90 bp AGGTCAACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCATCCACCGAGTCTTTCTaGTCGTCGTCCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RSTQSSVAHLTSGTAVRPSTESF*SSSFSC
Trigger: ACAAGAAAAGGACGACGATCAGAAAGACTCGGTGGA...TGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGTCCAGCACGTGAGATaGAATCATCATCCACCATAT +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETVQHVR*NHHPPY
Trigger: ATATGGTGGATGATGATTTCATCTCACGTGCTGGAC...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCCCGTCCGTCCTGCTCTaGCCGCTCGCTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DEIIIHHIINSSKSHPRAPSVLL*PLAGQL
Trigger: CAGCTGACCAGCGAGCGGGCAGAGCAGGACGGACGG...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGCTCTCGGTGGGCGGCTaGATCTTGGGATCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARLSVGG*ILGSTK
Trigger: CTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAG...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCTTGCGGAAGACCTaGCCTTCCAGCAGGAACCGG +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARSLRKT*PSSRNR
Trigger: CCGGTTCCTGCTGGAAGGGCAGGTCTTCCGCAAGCT...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACACTTTCTTCTCCTTCTTaGTCAGAGGCTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETLSSPS*SEASSP
Trigger: AGGAGAAGAAGCCTCTGACCAAGAAGGAGAAGAAAG...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCATCCCAGTGCCTAGCTTaGAAGTGGTATAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: DRALMDEGSQGLTHFLRASQCLA*KWYKRV
Trigger: GACTCTTTTATACCACTTCCAAGCTAGGCACTGGGA...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGACTGGGGTGTGCAGCTaGCATACTCACAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARTGVCS*HTHRLP
Trigger: TGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGT...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGGCCGGATCTCCATCATaGCTTTGTACCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARAGSPS*LCTAAR
Trigger: ACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGC...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCCCTGGGAGACCCAGGTaGCACGGAAGGAGGATACGC +
Preference number: 4 (lower is better)
Translates to: DEIIIHHIINSSKSHPRAPGRPR*HGRRIR
Trigger: GCGTATCCTCCTTCCGTGTCACCTGGGTCTCCCAGG...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR TCA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTTTGAGCGCCTTCATTTaGAGGATTAAGTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: NTELSGSPNIWDGCEARALSAFI*RIKSST
Trigger: TGTTGAAGACTTAATCCTTCAAATGAAGGCGCTCAA...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATACAGTCACTGGGAACTaGCTGGATTCCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHTVTGN*LDSTLM
Trigger: CATCAAGGTGGAATCCAGGCAGTTCCCAGTGACTGT...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTTAAAGACCTGTGCTTaGTTCTCTGGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHLKTCA*FSGASR
Trigger: TCTGCTGGCCCCAGAGAAGCAAGCACAGGTCTTTAA...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACATGCCTAGCTTGGAAGTaGTATAAAAGAGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: EAKPGAESILPALGSGETCLAWK*YKRVSS
Trigger: AGATGAGACTCTTTTATACCACTTCCAAGCTAGGCA...TGTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR GCA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCCTTAGCGTAGCGGGGTaGCACGGGGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DEIIIHHIINSSKSHPRALSVAG*HGECGH
Trigger: ATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAG...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp CACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGAGCAGGAAGTCCTTCTaGATTTCTTTAAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HHIINSSKSHPRARWHGRSRKSF*ISLSST
Trigger: TGTGCTGCTTAAAGAAATCCAGAAGGACTTCCTGCT...CCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCCTTGGCGAAGAGCCGTaGGTTCTGGGTGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: DEIIIHHIINSSKSHPRALGEEP*VLGEVL
Trigger: GAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAG...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CCA 90 bp GATGAAATCATCATCCACCATATAATAAACAGTTCAAAAAGTCACCCCCGGGCCCTGTGCTTGCTTCTCTaGGGCCAGCAGAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: DEIIIHHIINSSKSHPRALCLLL*GQQRVQ
Trigger: CTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACAG...GGCCCGGGGGTGACTTTTTGAACTGTTTATTATATGGTGGATGATGATTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR GCA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGTGTTCTAAGATTTTCTaGAGCACTTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNILFHNCLHRSRRSKARCSKIF*STFFSF
Trigger: GAAGGAGAAGAAAGTGCTGCAGAAAATCTTAGAACA...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS CCA 90 bp CGGGCTGACTGCTGGGTGCTGGAGCTGGCGGCAGAGGTGCCACGGTaGTCCCCACACCAGCCTCAGCCGGCTCAGCAGCTGGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: RADCWVLELAAEVPR*SPHQPQPAQQLGPR
Trigger: ACGAGGACCCAGCTGCTGAGCCGGCTGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp AACAGTCATCCCAGCCGGCACGGGCTGACTGCTGGGTGCTGGAGCTaGCGGCAGAGGTGCCACGGTGGTCCCCACACCAGCCTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: NSHPSRHGLTAGCWS*RQRCHGGPHTSLSR
Trigger: CCGGCTGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp AGGAGGAGGAACAGTCATCCCAGCCGGCACGGGCTGACTGCTGGGTaGTGGAGCTGGCGGCAGAGGTGCCACGGTGGTCCCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: RRRNSHPSRHGLTAG*WSWRQRCHGGPHTS
Trigger: GCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACTGTTCCTCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp AGCACGTGGAGCGGGAGGGAGGCATCCGGCTGCTCACCTCCATCTTaGCCGCCATCCCCCAGGTCCAGATCGAGGTCGGAGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: STWSGREASGCSPPS*PPSPRSRSRSESRA
Trigger: GGCCCTGGACTCCGACCTCGATCTGGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCTCCCGCTCCACGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp TCCTCCTCCTCCTCCTCAGCTGAGGGCCAGCGGCGACGCTTCCGGTaGGCACCGCTGAGGCTACTGATCTTCTCCTGGCCCGGGGCTACC +
Preference number: 5 (lower is better)
Translates to: SSSSSSAEGQRRRFR*APLRLLIFSWPGAT
Trigger: GGTAGCCCCGGGCCAGGAGAAGATCAGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS CCA 90 bp AGGAGGAACAGTCATCCCAGCCGGCACGGGCTGACTGCTGGGTGCTaGAGCTGGCGGCAGAGGTGCCACGGTGGTCCCCACACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RRNSHPSRHGLTAGC*SWRQRCHGGPHTSL
Trigger: GAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACTGTTCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp CTGGAGGAGGAGGAACAGTCATCCCAGCCGGCACGGGCTGACTGCTaGGTGCTGGAGCTGGCGGCAGAGGTGCCACGGTGGTCCCCACAC +
Preference number: 5 (lower is better)
Translates to: LEEEEQSSQPARADC*VLELAAEVPRWSPH
Trigger: GTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACTGTTCCTCCTCCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS-3UTR CAA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGATCGTCGTCCTTTTCTaGTGGCCGGGCTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLIVVLF*WPGSGG
Trigger: CCCTCCAGAGCCCGGCCACAAGAAAAGGACGACGAT...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGTGGGCGGCTGCATCTaGGGATCCACGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLVGGCI*GSTKSS
Trigger: TGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCAC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGTGGGCGGCTGCATCTaGGGATCCACGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKVGGCI*GSTKSS
Trigger: TGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCAC...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp CAGCTCCGATTCCGACTCCTCCTCCTCCTCCTCCTCCTCCTCAGCTaGGGGCCAGCGGCGACGCTTCCGGTGGGCACCGCTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: QLRFRLLLLLLLLLS*GPAATLPVGTAEAT
Trigger: AGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAGGAGGAGGAGGAGGAGTCGGAATCGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS GCA 90 bp GGGAAAGCCTTCCTGAGCCTGCGGCACAGCGCATGCACCTCAGCCTaGCCCGTCAGGAACACCAGGATGCCACCTGCGGGCAGCATCCGG +
Preference number: 5 (lower is better)
Translates to: GKAFLSLRHSACTSA*PVRNTRMPPAGSIR
Trigger: CCGGATGCTGCCCGCAGGTGGCATCCTGGTGTTCCTGACGGGGCAGGCTGAGGTGCATGCGCTGTGCCGCAGGCTCAGGAAGGCTTTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp CATCTCCTCGCTCTGGACCCTGCGGGCCAAGTGGTCCCCCAGGCCTaGCGTCACGATCTGTCGCAGGTAGGTCACCTGGCTCTCGGTGGG +
Preference number: 5 (lower is better)
Translates to: HLLALDPAGQVVPQA*RHDLSQVGHLALGG
Trigger: CCCACCGAGAGCCAGGTGACCTACCTGCGACAGATCGTGACGGCAGGCCTGGGGGACCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS GCA 90 bp AGAGAGTACAGCGGGAGCACGTGGAGCGGGAGGGAGGCATCCGGCTaGTCACCTCCATCTTGCCCGCCATCCCCCAGGTCCAGATCGAGG +
Preference number: 5 (lower is better)
Translates to: REYSGSTWSGREASG*SPPSCPPSPRSRSR
Trigger: CCTCGATCTGGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCTCCCGCTCCACGTGCTCCCGCTGTACTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp CAGCAGCACCATGAGGTCGCCGAGCTTCAGAGAAGCCCCCTGCCCTaGCCAGGTCCTCTTCATCTGGGCCACCCGGGCCCGCTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: QQHHEVAELQRSPLP*PGPLHLGHPGPLAL
Trigger: AAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTGGGCAGGGCAGGGGGCTTCTCTGAAGCTCGGCGACCTCATGGTGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp GCCTTCTCTGCAACCAGGGCTCGCAGAAGGCTCTCCGTACGGGGCTaGAGCCTGTGGGGCAGGAATGCACGTTGGTGGCAGGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AFSATRARRRLSVRG*SLWGRNARWWQAAR
Trigger: CCTGGCTGCCTGCCACCAACGTGCATTCCTGCCCCACAGGCTGCAGCCCCGTACGGAGAGCCTTCTGCGAGCCCTGGTTGCAGAGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507267.2
CDS CCA 90 bp ACCGGATCTGGTAGGAGACGACCCGCTGGGACAGATTCATCTCCTTaGCCACTCGCTGGGACATGGCCACGGCGGCCACTCGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: TGSGRRRPAGTDSSP*PLAGTWPRRPLGGA
Trigger: AGCCCCGCCGAGTGGCCGCCGTGGCCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTCCCAGCGGGTCGTCTCCTACCAGATCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp GGCCTGCCGTCACGATCTGTCGCAGGTAGGTCACCTGGCTCTCGGTaGGCGGCTGCATCTTGGGATCCACGAAGAGCTCAGCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: GLPSRSVAGRSPGSR*AAASWDPRRAQPRG
Trigger: GCCCCGAGGCTGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAGCCAGGTGACCTACCTGCGACAGATCGTGACGGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CCA 90 bp CAGGGTGACCCTGGGCCCAGGGACTCTCCTCAGGTGGCAAAAAGCTaGCCAGCAGCCGTGGGGCCAGATCCTTCTGCCAAGCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QGDPGPRDSPQVAKS*PAAVGPDPSAKPGL
Trigger: CAGCCCTGGCTTGGCAGAAGGATCTGGCCCCACGGCTGCTGGCCAGCTTTTTGCCACCTGAGGAGAGTCCCTGGGCCCAGGGTCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CAA 90 bp GGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGTCGATGATCACCACCTaGTACCGCAGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRRPSTCLLGLLAGRAGKSMITT*YRSSRK
Trigger: CTTCCTGCTGCTGCGGTACAAGGTGGTGATCATCGA...CTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCATGACCGGCGGCGGCTaGGCGAAGAGCCGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: LWGDICALTMEDRRQGPPMTGGG*AKSRGF
Trigger: GAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCAT...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCTCCAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGTCAGCCCGCGCCTTCTaGGCCCTGGCCCTTGACTTC +
Preference number: 5 (lower is better)
Translates to: AASPPVPKPVLGPAARFLSARAF*ALALDF
Trigger: GAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTGA...CAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTGGAGGGCTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGTGCTTTCTGGGGCGGTaGCAGGGCACCCAGTGCGAT +
Preference number: 5 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQCFLGR*QGTQCD
Trigger: ATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCA...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp CGTCCTTTTCTTGTGGCCGGGCTCTGGAGGGTGGGAAAGCCTTCCTaGGCCTGCGGCACAGCGCATGCACCTCAGCCTGCCCCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: RPFLVAGLWRVGKPS*ACGTAHAPQPAPSG
Trigger: TCCTGACGGGGCAGGCTGAGGTGCATGCGCTGTGCCGCAGGCTCAGGAAGGCTTTCCCACCCTCCAGAGCCCGGCCACAAGAAAAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp GCAGCCGTGTTGTCGGCTCAGTGCCAGCATCTTAGCGTAGCGGGGTaGCACGGGGAATGTGGCCATTGTCCGGCCCAGCGCAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: AAVLSAQCQHLSVAG*HGECGHCPAQRSDG
Trigger: CCCATCACTGCGCTGGGCCGGACAATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp GACTCTCAGCCCAGAGCCCCCGTCGGAACTGAGCTTGGCCCTGAGTaGCCAGCCGCCAACCTCGCACCTGTCCAGCTCCTCAAACAGCTC +
Preference number: 5 (lower is better)
Translates to: DSQPRAPVGTELGPE*PAANLAPVQLLKQL
Trigger: GAGCTGTTTGAGGAGCTGGACAGGTGCGAGGTTGGCGGCTGGGCACTCAGGGCCAAGCTCAGTTCCGACGGGGGCTCTGGGCTGAGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679875.1
CDS CCA 90 bp TCCACCTTGATGACCGGCGGCGGCTTGGCGAAGAGCCGTGGGTTCTaGGTGAAGTCCTCCACCCGCAGCGTGGCCGACATGATGAGCAGC +
Preference number: 5 (lower is better)
Translates to: STLMTGGGLAKSRGF*VKSSTRSVADMMSS
Trigger: GCTGCTCATCATGTCGGCCACGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCATCAAGGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp TGTGCTTGCTTCTCTGGGGCCAGCAGAGAGTACAGCGGGAGCACGTaGAGCGGGAGGGAGGCATCCGGCTGCTCACCTCCATCTTGCCCG +
Preference number: 5 (lower is better)
Translates to: CACFSGASREYSGST*SGREASGCSPPSCP
Trigger: CGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCTCCCGCTCCACGTGCTCCCGCTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS-3UTR CAA 90 bp AGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGGTTCTTCGGAGAGAATaGGGAGCTTCAGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: RPSTCLLGLLAGRAGKGLVLRRE*GASAVP
Trigger: AGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAAC...CAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 90 bp CCTGGATTCCACCTTGATGACCGGCGGCGGCTTGGCGAAGAGCCGTaGGTTCTGGGTGAAGTCCTCCACCCGCAGCGTGGCCGACATGAT +
Preference number: 5 (lower is better)
Translates to: PGFHLDDRRRLGEEP*VLGEVLHPQRGRHD
Trigger: ATCATGTCGGCCACGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCATCAAGGTGGAATCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS-3UTR CAA 90 bp CGCTGGGCTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGTGCCTGGATTCCACCTaGATGACCGGCGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RWALGRHLCPHHGGQKAGCLDST*MTGGGL
Trigger: CAAGCCGCCGCCGGTCATCAAGGTGGAATCCAGGCA...CCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAGCCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CCACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATCAGTCCACCACGTACTaGATGCCAGGGATGGTAAGC +
Preference number: 5 (lower is better)
Translates to: PRASSAFWQGGRGRDCRDQSTTY*MPGMVS
Trigger: GCTTACCATCCCTGGCATCAAGTACGTGGTGGACTG...ATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCGGGCAGGCAGCCGTGTaGTCGGCTCAGTGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LEREELQEGGPPRASSAFGQAAV*SAQCQH
Trigger: ATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCC...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCTGGCATCGGGGCACACGGCATaGACTGCGGTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EGRIAGRRPSTCLLGLLASGHTA*TAVVSW
Trigger: CCAGCTGACCACCGCAGTCAATGCCGTGTGCCCCGA...TGCCAGAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp CCAGCTCCTCAAACAGCTCCCGCACCGTCATGCTGGCCACGATGGTaGTGGCATAGGGCAGGCAGCCGTGTTGTCGGCTCAGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPQTAPAPSCWPRW*WHRAGSRVVGSVPA
Trigger: TGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCATGACGGTGCGGGAGCTGTTTGAGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS TCA 90 bp TCCTCTTCATCTGGGCCACCCGGGCCCGCTTGCTCTTCAGCCTGGTaGGCTCCTCGTCACTGGCCGCTGGTCTGTCCAGCTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: SSSSGPPGPACSSAW*APRHWPLVCPAPQT
Trigger: TGTTTGAGGAGCTGGACAGACCAGCGGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 90 bp TCTGGGAGAGGGGCAGGTTGGGGAGAAAGGCGTCTGTGGCCGGCGTaGTCGCCAGCACACTGCCCTTTGTTGTTCAAGGCATGGCCACTC +
Preference number: 5 (lower is better)
Translates to: SGRGAGWGERRLWPA*SPAHCPLLFKAWPL
Trigger: GAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACGCCTTTCTCCCCAACCTGCCCCTCTCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS-3UTR CAA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCCCTTCAACGTGTCCTaGTCCTCCAGTTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLPFNVS*SSSSSC
Trigger: GCAGCTGGAACTGGAGGACAAGGACACGTTGAAGGG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CAA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCATCGTCGTCCTTTTCTaGTGGCCGGGCTCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLIVVLF*WPGSGG
Trigger: CCCTCCAGAGCCCGGCCACAAGAAAAGGACGACGAT...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCTGCTTTCTGGGGCGGTaGCAGGGCACCCAGTGCGAT +
Preference number: 5 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVCFLGR*QGTQCD
Trigger: ATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCA...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CAGTCCCCAAACCAGTCCTCGGCCCTGCAGCCAGGTTTCTGGTCAGTGGACAGTTCGGGGCACACGGCATaGACTGCGGTGGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QSPNQSSALQPGFWSVDSSGHTA*TAVVSW
Trigger: CCAGCTGACCACCGCAGTCAATGCCGTGTGCCCCGA...ACTGTCCACTGACCAGAAACCTGGCTGCAGGGCCGAGGACTGGTTTGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CAA 90 bp ATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCGGTATGAGGCCAGCTaGCGGAAGACCTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: ICALTMEDRRQGPPDSLVRYEAS*RKTCPS
Trigger: GGAAGGGCAGGTCTTCCGCAAGCTGGCCTCATACCG...GACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCTCCTGTCCCTCTTTCTaGCTGGGGGACCTACCCCAC +
Preference number: 5 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLSCPSF*LGDLPH
Trigger: GTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGGA...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp GCATCTTGGGATCCACGAAGAGCTCAGCCTCGGGGCACACGGCATTaGCTGAGGGGAGAACCAAGAGTGAGGTCGGTGGTGGCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: ASWDPRRAQPRGTRH*LRGEPRVRSVVARP
Trigger: GGGCCTTGCCACCACCGACCTCACTCTTGGTTCTCCCCTCAGTCAATGCCGTGTGCCCCGAGGCTGAGCTCTTCGTGGATCCCAAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 90 bp TTGCTTCACCCTTTCTGCTTTCTGGGGCGGTTGCAGGGCACCCAGTaGGATCAACAGCTCCTCGGCGGCAAGAAGGGCTTCCACGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLHPFCFLGRLQGTQ*DQQLLGGKKGFHGG
Trigger: CCCTCCGTGGAAGCCCTTCTTGCCGCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp CACGATGGTGATGGCATAGGGCAGGCAGCCGTGTTGTCGGCTCAGTaGCAGCATCTTAGCGTAGCGGGGTGCCACGGGGAATGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: HDGDGIGQAAVLSAQ*QHLSVAGCHGECGH
Trigger: ATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp TCATGGCTTTGTACCGCAGCCCGTTGGCTTCGCAAAACTGGGGTGTaGAGCTGGCATACTCACAGGCTCCCACGGCGCCCAGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SWLCTAARWLRKTGV*SWHTHRLPRRPAAP
Trigger: TGGTGCTGCTGGGCGCCGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp GCCACAGCCAGAAGGACACAGAGCATGGTGACAGGGCCACCACCATaGACCTGGCGCTGGGAGAAGGATCGGCCGGAAGAGAGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ATARRTQSMVTGPPP*TWRWEKDRPEESHQ
Trigger: TTGATGGCTCTCTTCCGGCCGATCCTTCTCCCAGCGCCAGGTGCATGGTGGTGGCCCTGTCACCATGCTCTGTGTCCTTCTGGCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp CCCGCAGGCGCCGGATCTCCATCATGGCTTTGTACCGCAGCCCGTTaGCTTCGCAAAACTGGGGTGTGCAGCTGGCATACTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: PAGAGSPSWLCTAAR*LRKTGVCSWHTHRL
Trigger: GAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGCGCCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGATTGTACCGCAGCCCGTaGGCTTCGCAAAACTGGGGT +
Preference number: 5 (lower is better)
Translates to: LGRHLCPHHGGQKAGASRLYRSP*ASQNWG
Trigger: ACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAA...TCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGAACTCGGGGAGCTCTTaGAAAAGGACGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLNSGSS*KRTELG
Trigger: CCCCAGCTCCGTCCTTTTCAAAGAGCTCCCCGAGTT...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCCTGGAGAGGGAAGAATaGCAGGAAGGAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LWGDICALTMEDRRQGPPLEREE*QEGGPP
Trigger: TGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGTCCTGTCCCTCTTTCTaGCTGGGGGACCTACCCCAC +
Preference number: 5 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKSCPSF*LGDLPH
Trigger: GTGGGGTAGGTCCCCCAGCAAGAAAGAGGGACAGGA...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS CCA 90 bp ATCTCCATCATGGCTTTGTACCGCAGCCCGTTGGCTTCGCAAAACTaGGGTGTGCAGCTGGCATACTCACAGGCTCCCACGGCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ISIMALYRSPLASQN*GVQLAYSQAPTAPS
Trigger: GCTGGGCGCCGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 90 bp TGGCCGGCGTGGTCGCCAGCACACTGCCCTTTGTTGTTCAAGGCATaGCCACTCAGTGGTGGCCATTTATTCGGGGGTGAGGTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: WPAWSPAHCPLLFKA*PLSGGHLFGGEVGD
Trigger: ATCCCCCACCTCACCCCCGAATAAATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS CCA 90 bp GCCAGAAGGACACAGAGCATGGTGACAGGGCCACCACCATGCACCTaGCGCTGGGAGAAGGATCGGCCGGAAGAGAGCCATCAATTCTGG +
Preference number: 5 (lower is better)
Translates to: ARRTQSMVTGPPPCT*RWEKDRPEESHQFW
Trigger: CCAGAATTGATGGCTCTCTTCCGGCCGATCCTTCTCCCAGCGCCAGGTGCATGGTGGTGGCCCTGTCACCATGCTCTGTGTCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp CTCTGGGGAGACATCTGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGAACGAGCGCGTTGCTaGCATCAACTCCCTTCAACG +
Preference number: 5 (lower is better)
Translates to: LWGDICALTMEDRRQGPPERARC*HQLPST
Trigger: CGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTC...GGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACAGATGTCTCCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CAA 90 bp CACTTCCTGAGAGCAGGCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGATTCATCTCCTaGGCCACTCGCTGGGACATG +
Preference number: 5 (lower is better)
Translates to: HFLRAGHEAHARWSRSHGDRFIS*ATRWDM
Trigger: CATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTC...ACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGCCTGCTCTCAGGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AGGCGCATCCTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCTCGATGATCACCACCTaGTACCGCAGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RRILCGMAAVTKHSQRQLSMITT*YRSSRK
Trigger: CTTCCTGCTGCTGCGGTACAAGGTGGTGATCATCGA...GAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAGGATGCGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GCCACGAAGCCCATGCCAGGTGGTCACGGTCGCACGGTGACAGGCTGCTGCCAGGACATGATGAGCAGCTaGAGTGGCAGGTTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: ATKPMPGGHGRTVTGCCQDMMSS*SGRFLL
Trigger: TAAGAGGAACCTGCCACTCAAGCTGCTCATCATGTC...CTGGCAGCAGCCTGTCACCGTGCGACCGTGACCACCTGGCATGGGCTTCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTTGCCTGGATTCCACCTaGATGACCGGCGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: NTELSGSPNIWDGCEARACLDST*MTGGGL
Trigger: CAAGCCGCCGCCGGTCATCAAGGTGGAATCCAGGCA...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp ACGTGCCTCCTCGGCCTTCTGGCAGGGCGGGCGGGGAAGGGACTGCAGAGATCTGTCGGGAAGGGGAAGTaGATGACCTTTTCAACGTTG +
Preference number: 5 (lower is better)
Translates to: TCLLGLLAGRAGKGLQRSVGKGK*MTFSTL
Trigger: CAACGTTGAAAAGGTCATCAACTTCCCCTTCCCGAC...AGATCTCTGCAGTCCCTTCCCCGCCCGCCCTGCCAGAAGGCCGAGGAGGCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTCTGCGGCATGGCAGCGGTGACCAAGCACAGCCAACGTCAGCTCCGCTCCCTGCCGGTTCTCCTGCAGTaGCTTCACCCTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LCGMAAVTKHSQRQLRSLPVLLQ*LHPFCF
Trigger: AAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCGG...CAGGGAGCGGAGCTGACGTTGGCTGTGCTTGGTCACCGCTGCCATGCCGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GGCCTGTGGAAGCCACTCACAGTACTCAGCCAGCAGGTCTGCAGGGGAGGGAAGTTGTACCGCAGCCCGTaGGCTTCGCAAAACTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLWKPLTVLSQQVCRGGKLYRSP*ASQNWG
Trigger: ACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAA...CTTCCCTCCCCTGCAGACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS-3UTR CAA 90 bp GTTGCCATAACACAGGAAAGGCGTTGGCGGCCACCCTCCCAAGAAGGCATGGAGCGGTATGAGGCCAGCTaGCGGAAGACCTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VAITQERRWRPPSQEGMERYEAS*RKTCPS
Trigger: GGAAGGGCAGGTCTTCCGCAAGCTGGCCTCATACCG...CTCCATGCCTTCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTTATGGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCAGCTAGGCGCAGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: VPVQGQHNSRVAPAQLGAEGSQG*THFLRA
Trigger: TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTC...TGCGCCTAGCTGGGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCGAGGGTTCCCAGGGCTaGACCCACTTCCTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPAEGSQG*THFLRA
Trigger: TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTC...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCCTGGAGAGGGAAGAATaGCAGGAAGGAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LEREELQEGGPPRASSAFLEREE*QEGGPP
Trigger: TGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCAACACAGGAAAGGCGTaGGCGGCCACCCTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPANTGKA*AATLPR
Trigger: TCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTT...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp TTTCTTCCAAGCAGCCAGCAAGGCTTCATGGCAGTCAGCCTTCTCTaGAACCAGGGCTCGCAGAAGGCTCTCCGTACGGGGCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: FLPSSQQGFMAVSLL*NQGSQKALRTGLQP
Trigger: AGGCTGCAGCCCCGTACGGAGAGCCTTCTGCGAGCCCTGGTTGCAGAGAAGGCTGACTGCCATGAAGCCTTGCTGGCTGCTTGGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000507267.2
ENST00000542400.5
ENST00000544745.2
CDS GCA 90 bp GGTTGGGGAGAAAGGCGTCTGTGGCCGGCGTGGTCGCCAGCACACTaGCCTTTGTTGTTCAAGGCATGGCCACTCAGTGGTGGCCATTTA +
Preference number: 5 (lower is better)
Translates to: GWGERRLWPAWSPAH*PLLFKAWPLSGGHL
Trigger: TAAATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACGCCTTTCTCCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS GCA 90 bp AGAACCAAGAGTGAGGTCGGTGGTGGCAAGGCCCGGAGCCAGCTCTaGCCTGACCTCCTAGAAAGTCCCAACCATGCTCAGTGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: RTKSEVGGGKARSQL*PDLLESPNHAQCSS
Trigger: GCTAGAGCACTGAGCATGGTTGGGACTTTCTAGGAGGTCAGGGCAGAGCTGGCTCCGGGCCTTGCCACCACCGACCTCACTCTTGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGGGTAGAACGAGCGCGTaGCTTGCATCAACTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGGRTSA*LASTPF
Trigger: GAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACC...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CAA 90 bp GATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCCACGAAGCCCATAGCATCCGGTGGATCTaGCAGACCTTCCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: DEGSQGLTHFLRAGHEAHSIRWI*QTFRKH
Trigger: GTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGCT...ATGGGCTTCGTGGCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGGCGACGTCTCGGCCACATaGGTGGCCACAACACACAAC +
Preference number: 5 (lower is better)
Translates to: RALMDEGSQGLTHFLRAGDVSAT*VATTHN
Trigger: GTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTC...GCCTGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCTGTCGGGAAGGGGAAGTaGATGACCTTTTCAACGTTG +
Preference number: 5 (lower is better)
Translates to: ALTMEDRRQGPPDSLVLPVGKGK*MTFSTL
Trigger: CAACGTTGAAAAGGTCATCAACTTCCCCTTCCCGAC...AGGCAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATAACTCGGGGAGCTCTTaGAAAAGGACGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHNSGSS*KRTELG
Trigger: CCCCAGCTCCGTCCTTTTCAAAGAGCTCCCCGAGTT...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 90 bp GAAAAGGTGAAACCGAGCGACGACCTGGTGGGGGAGGGTGCAGGCTaGCAGCTCGAATCTGTTAGTGCCCTGCTCATGTGCACATTCCCT +
Preference number: 5 (lower is better)
Translates to: EKVKPSDDLVGEGAG*QLESVSALLMCTFP
Trigger: AGGGAATGTGCACATGAGCAGGGCACTAACAGATTCGAGCTGCCAGCCTGCACCCTCCCCCACCAGGTCGTCGCTCGGTTTCACCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp AGGACACAGAGCATGGTGACAGGGCCACCACCATGCACCTGGCGCTaGGAGAAGGATCGGCCGGAAGAGAGCCATCAATTCTGGCATCAA +
Preference number: 5 (lower is better)
Translates to: RTQSMVTGPPPCTWR*EKDRPEESHQFWHQ
Trigger: TTGATGCCAGAATTGATGGCTCTCTTCCGGCCGATCCTTCTCCCAGCGCCAGGTGCATGGTGGTGGCCCTGTCACCATGCTCTGTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGCCATCCGTCATGAACTaGATTCTGGTCTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLPSVMN*ILVSSV
Trigger: GACAGAGGAGACCAGAATCAAGTTCATGACGGATGG...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp ACAGTTCAAAAAGTCACCCCCGGGCCAGATGGCACGGGCGGCAGCACCCTTCATATCTCCATCATGGCTTaGTACCGCAGCCCGTTGGCT +
Preference number: 5 (lower is better)
Translates to: TVQKVTPGPDGTGGSTLHISIMA*YRSPLA
Trigger: AGCCAACGGGCTGCGGTACAAAGCCATGATGGAGAT...ATGAAGGGTGCTGCCGCCCGTGCCATCTGGCCCGGGGGTGACTTTTTGAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp GGGTGCAAGAACGTGGCCTGCCCAGAAGAGACCCAGTGTCCACGCTaGCCTCTCTACGCATCGTCCTCTTGCCATATGTTGGAGGACATT +
Preference number: 5 (lower is better)
Translates to: GCKNVACPEETQCPR*PLYASSSCHMLEDI
Trigger: AATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 90 bp ATGGAAGGCAAATTCTCCACTAGCCTTGGGTGCAAGAACGTGGCCTaGCCAGAAGAGACCCAGTGTCCACGCTGCCCTCTCTACGCATCG +
Preference number: 5 (lower is better)
Translates to: MEGKFSTSLGCKNVA*PEETQCPRCPLYAS
Trigger: CGATGCGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCCAAGGCTAGTGGAGAATTTGCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp TGTGCCCTCACCATGGAGGACAGAAGGCAGGGGCCTCCCGACTCCTTGGTCCTGACTTTCTTCTCCTTCTaGGTCAGAGGCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CALTMEDRRQGPPDSLVLTFFSF*VRGFFS
Trigger: GGAGAAGAAGCCTCTGACCAAGAAGGAGAAGAAAGT...CAGGACCAAGGAGTCGGGAGGCCCCTGCCTTCTGTCCTCCATGGTGAGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CAA 90 bp CGGGATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGACAGATTCATCTCCTaGGCCACTCGCTGGGACATG +
Preference number: 5 (lower is better)
Translates to: RDRALMDEGSQGLTHFLRDRFIS*ATRWDM
Trigger: CATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTC...TCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCAGCCCGCGCCTTCTaGGCCCTGGCCCTTGACTTC +
Preference number: 5 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHSARAF*ALALDF
Trigger: GAAGTCAAGGGCCAGGGCCAAGAAGGCGCGGGCTGA...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GATCGAGCTCTCATGGATGAGGGTTCCCAGGGCTTGACCCACTTCCTGAGAGCAGACGTCTCGGCCACATaGGTGGCCACAACACACAAC +
Preference number: 5 (lower is better)
Translates to: DRALMDEGSQGLTHFLRADVSAT*VATTHN
Trigger: GTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTC...TGCTCTCAGGAAGTGGGTCAAGCCCTGGGAACCCTCATCCATGAGAGCTCGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGCCCCAGCCCCGGTTCTCCTGCAGTaGCTTCACCCTTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: EGSAVPVQGQHNSRVAPAPVLLQ*LHPFCF
Trigger: AAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCGG...GGCTGGGGCCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp TTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGAGCAGAATCCATGGGCAGGCAGCCGTGTaGTCGGCTCAGTGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: FHNCLHRSRRSKARSRIHGQAAV*SAQCQH
Trigger: ATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCC...ATGGATTCTGCTCCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp GTGGTCTTCCCGCTGCCGGTCTCACCACACACGATGACGATGGGGTaGTCGGCCACAGCCTCCATGATTACTTGTTCTTCGGAGAGAATT +
Preference number: 5 (lower is better)
Translates to: VVFPLPVSPHTMTMG*SATASMITCSSERI
Trigger: AATTCTCTCCGAAGAACAAGTAATCATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGACCGGCAGCGGGAAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 90 bp GCCACTGTAACCAGCACTGTCTGGAGGCTGACTGCAATTCTAAGCTaGTGCACCTGGAATGGGGCTGCTCTGGAAAGCCACAGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ATVTSTVWRLTAILS*CTWNGAALESHSQK
Trigger: CTTCTGGCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCTGGTTACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp CACTGTCTGGAGGCTGACTGCAATTCTAAGCTGCTGCACCTGGAATaGGGCTGCTCTGGAAAGCCACAGCCAGAAGGACACAGAGCATGG +
Preference number: 5 (lower is better)
Translates to: HCLEADCNSKLLHLE*GCSGKPQPEGHRAW
Trigger: CCATGCTCTGTGTCCTTCTGGCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp ACTAAGCCTCCAACTACCTCCTCAGCCCAAGAGGTGACCTTAGGATaGAAGGCACAGCGAATGGCAGGAGGATGGCAGCAGAGAAACGCC +
Preference number: 5 (lower is better)
Translates to: TKPPTTSSAQEVTLG*KAQRMAGGWQQRNA
Trigger: GGCGTTTCTCTGCTGCCATCCTCCTGCCATTCGCTGTGCCTTCCATCCTAAGGTCACCTCTTGGGCTGAGGAGGTAGTTGGAGGCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp CTCCCTGACTCTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCGACATGATGAGCAGCTaGAGTGGCAGGTTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: LPDSGEGRIAGRRPSTCLDMMSS*SGRFLL
Trigger: TAAGAGGAACCTGCCACTCAAGCTGCTCATCATGTC...GAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAGAGTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGATGACCGGCGGCGGCTaGGCGAAGAGCCGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RNILFHNCLHRSRRSKARMTGGG*AKSRGF
Trigger: GAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCAT...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AGGTCAACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCACAGTCCACCACGTACTaGATGCCAGGGATGGTAAGC +
Preference number: 5 (lower is better)
Translates to: RSTQSSVAHLTSGTAVRPQSTTY*MPGMVS
Trigger: GCTTACCATCCCTGGCATCAAGTACGTGGTGGACTG...TGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp CCGCAGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGTCAGCCAGCAGGTATTaGGGGTTTTTCTTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: PQKQSQEQNPFCQRWALGSASRY*GFFFQA
Trigger: TGCTTGGAAGAAAAACCCCAAATACCTGCTGGCTGA...CCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308736.7
CDS-3UTR CAA 90 bp GACAAACTGAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGAACACAGGAAAGGCGTaGGCGGCCACCCTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: DKLRALQSPFKANIIVVWNTGKA*AATLPR
Trigger: TCTTGGGAGGGTGGCCGCCAACGCCTTTCCTGTGTT...CCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp AGCTTCCCTGGGTGTTGGTGGCAGGAAGTATTTGTGCTGCTGAGCTaGGGTAGAGTCCAGGGCAAGGCCTCATCCTTCTGCATGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SFPGCWWQEVFVLLS*GRVQGKASSFCMRR
Trigger: CCTTCTCATGCAGAAGGATGAGGCCTTGCCCTGGACTCTACCTCAGCTCAGCAGCACAAATACTTCCTGCCACCAACACCCAGGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 90 bp GAAGAGACCCAGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTTaGCATATGTTGGAGGACATTTCCTTCCTCTCAAGCTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EETQCPRCPLYASSS*HMLEDISFLSSFPG
Trigger: CCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 90 bp ACTGTAACCAGCACTGTCTGGAGGCTGACTGCAATTCTAAGCTGCTaGACCTGGAATGGGGCTGCTCTGGAAAGCCACAGCCAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: TVTSTVWRLTAILSC*TWNGAALESHSQKD
Trigger: GTCCTTCTGGCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCTGGTTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp AGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTTGCCATATGTTaGAGGACATTTCCTTCCTCTCAAGCTTCCCTGGGTGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SVHAALSTHRPLAIC*RTFPSSQASLGVGG
Trigger: GCCACCAACACCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 90 bp CTTAAATGGAAGGCAAATTCTCCACTAGCCTTGGGTGCAAGAACGTaGCCTGCCCAGAAGAGACCCAGTGTCCACGCTGCCCTCTCTACG +
Preference number: 5 (lower is better)
Translates to: LKWKANSPLALGART*PAQKRPSVHAALST
Trigger: CGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCCAAGGCTAGTGGAGAATTTGCCTTCCATTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp CTGGAGAGGGAAGAATTGCAGGAAGGAGGCCCTCCACGTGCCTCCTCGGCCTTCAGCCTCCATGATTACTaGTTCTTCGGAGAGAATTGG +
Preference number: 5 (lower is better)
Translates to: LEREELQEGGPPRASSAFSLHDY*FFGENW
Trigger: CCAATTCTCTCCGAAGAACAAGTAATCATGGAGGCT...GAAGGCCGAGGAGGCACGTGGAGGGCCTCCTTCCTGCAATTCTTCCCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp AACACAGAGCTCAGTGGCTCACCTAACATCTGGGACGGCTGTGAGGCCAGGGCTCCATCCGTCATGAACTaGATTCTGGTCTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: NTELSGSPNIWDGCEARAPSVMN*ILVSSV
Trigger: GACAGAGGAGACCAGAATCAAGTTCATGACGGATGG...AGCCCTGGCCTCACAGCCGTCCCAGATGTTAGGTGAGCCACTGAGCTCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS-3UTR CAA 90 bp GACAAACTGAGGGCTCTGCAGTCCCCGTTCAAGGCCAACATAATAGTCGTGTGGAGCATCCGGTGGATCTaGCAGACCTTCCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: DKLRALQSPFKANIIVVWSIRWI*QTFRKH
Trigger: GTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGCT...CCACACGACTATTATGTTGGCCTTGAACGGGGACTGCAGAGCCCTCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp CCCCTAACACCCAGGTGGCCTCAGACTCAGTTCTGGTCCATGATGTaGAGAAGGAAGTTGCGGCTGGAATTCCTGGGAACGTTCAATACG +
Preference number: 5 (lower is better)
Translates to: PLTPRWPQTQFWSMM*RRKLRLEFLGTFNT
Trigger: CGTATTGAACGTTCCCAGGAATTCCAGCCGCAACTTCCTTCTTCACATCATGGACCAGAACTGAGTCTGAGGCCACCTGGGTGTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 90 bp CTAATGTCACCAAGCCACTGTAACCAGCACTGTCTGGAGGCTGACTaGAATTCTAAGCTGCTGCACCTGGAATGGGGCTGCTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LMSPSHCNQHCLEAD*NSKLLHLEWGCSGK
Trigger: CTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCTGGTTACAGTGGCTTGGTGACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS-3UTR CAA 90 bp AGAAGCAAAGCCAGGAGCAGAATCCATTCTGCCAGCGCTGGGCTCTGGGGAGACAGCCTCCATGATTACTaGTTCTTCGGAGAGAATTGG +
Preference number: 5 (lower is better)
Translates to: RSKARSRIHSASAGLWGDSLHDY*FFGENW
Trigger: CCAATTCTCTCCGAAGAACAAGTAATCATGGAGGCT...GTCTCCCCAGAGCCCAGCGCTGGCAGAATGGATTCTGCTCCTGGCTTTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 90 bp GGGCTTTGGTCTTCTTTTTCTTCTTCCCCGGTAGAACGAGCGCGTTaGTTGCATCAACTCCCTTCAACGTGTCCTTGTCCTCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GLWSSFSSSPVERAR*LHQLPSTCPCPPVP
Trigger: TGGAACTGGAGGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGACCAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS GCA 90 bp CCACCTCGTCAGCCTTCTCTTTGGTGTGATACATGCGGTTCCCAGTaGCTAGCTTGGAAGTGGTATAAAAGAGTCTCATCTCAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: PPRQPSLWCDTCGSQ*LAWKWYKRVSSQLR
Trigger: CCGAAGCTGAGATGAGACTCTTTTATACCACTTCCAAGCTAGGCACTGGGAACCGCATGTATCACACCAAAGAGAAGGCTGACGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS-3UTR CAA 90 bp AGGAACATTTTATTCCATAACTGTCTCCACCGAAGCCGCAGAAGCAAAGCCAGGATCTCCATCATGGCTTaGTACCGCAGCCCGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RNILFHNCLHRSRRSKARISIMA*YRSPLA
Trigger: AGCCAACGGGCTGCGGTACAAAGCCATGATGGAGAT...CCTGGCTTTGCTTCTGCGGCTTCGGTGGAGACAGTTATGGAATAAAATGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS TCA 90 bp GGGAAGGGGAAGTTGATGACCTTTTCAACGTTGAGCGCCTTCATTTaGAGGATTAAGTCTTCAACAGGCCTCCGGGTGATTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: GKGKLMTFSTLSAFI*RIKSSTGLRVISGG
Trigger: TCCTCCAGAAATCACCCGGAGGCCTGTTGAAGACTTAATCCTTCAAATGAAGGCGCTCAACGTTGAAAAGGTCATCAACTTCCCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 90 bp AGAAGGATCGGCCGGAAGAGAGCCATCAATTCTGGCATCAAACCTTaGGATCTGCTTAAATGGAAGGCAAATTCTCCACTAGCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: RRIGRKRAINSGIKP*DLLKWKANSPLALG
Trigger: ACCCAAGGCTAGTGGAGAATTTGCCTTCCATTTAAGCAGATCCCAAGGTTTGATGCCAGAATTGATGGCTCTCTTCCGGCCGATCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp CCCAGCCGGCACGGGCTGACTGCTGGGTGCTGGAGCTaGCGGCAGAGGTGCCACGGTGGTCCCCACACCAGC +
Preference number: 6 (lower is better)
Translates to: PSRHGLTAGCWS*RQRCHGGPHTS
Trigger: GCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp AGCGGGAGCACGTGGAGCGGGAGGGAGGCATCCGGCTaGTCACCTCCATCTTGCCCGCCATCCCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SGSTWSGREASG*SPPSCPPSPRS
Trigger: GGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCTCCCGCTCCACGTGCTCCCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp TGCTGGGTGCTGGAGCTGGCGGCAGAGGTGCCACGGTaGTCCCCACACCAGCCTCAGCCGGCTCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: CWVLELAAEVPR*SPHQPQPAQQL
Trigger: CAGCTGCTGAGCCGGCTGAGGCTGGTGTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp AGTCATCCCAGCCGGCACGGGCTGACTGCTGGGTGCTaGAGCTGGCGGCAGAGGTGCCACGGTGGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SHPSRHGLTAGC*SWRQRCHGGPH
Trigger: GTGGGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 90 bp GAGCACGTGGAGCGGGAGGGAGGCATCCGGCTGCTCACCTCCATCTaGCCCGCCATCCCCCAGGTCCAGATCGAGGTCGGAGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: EHVEREGGIRLLTSI*PAIPQVQIEVGVQG
Trigger: GCCCTGGACTCCGACCTCGATCTGGACCTGGGGGATGGCGGGCAAGATGGAGGTGAGCAGCCGGATGCCTCCCTCCCGCTCCACGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS TCA 72 bp TTCCGACTCCTCCTCCTCCTCCTCCTCCTCCTCAGCTaGGGGCCAGCGGCGACGCTTCCGGTGGGCACCGCT +
Preference number: 6 (lower is better)
Translates to: FRLLLLLLLLLS*GPAATLPVGTA
Trigger: AGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGAGGAGGAGGAGGAGGAGGAGTCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS GCA 72 bp AACAGTCATCCCAGCCGGCACGGGCTGACTGCTGGGTaGTGGAGCTGGCGGCAGAGGTGCCACGGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: NSHPSRHGLTAG*WSWRQRCHGGP
Trigger: GGGACCACCGTGGCACCTCTGCCGCCAGCTCCAGCACCCAGCAGTCAGCCCGTGCCGGCTGGGATGACTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp CCCAGAGCCCCCGTCGGAACTGAGCTTGGCCCTGAGTaGCCAGCCGCCAACCTCGCACCTGTCCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: PRAPVGTELGPE*PAANLAPVQLL
Trigger: GAGGAGCTGGACAGGTGCGAGGTTGGCGGCTGGGCACTCAGGGCCAAGCTCAGTTCCGACGGGGGCTCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679875.1
CDS TCA 72 bp TCTGGGCCACCCGGGCCCGCTTGCTCTTCAGCCTGGTaGGCTCCTCGTCACTGGCCGCTGGTCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SGPPGPACSSAW*APRHWPLVCPA
Trigger: AGCTGGACAGACCAGCGGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCAAGCGGGCCCGGGTGGCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS GCA 72 bp GCTCTGGACCCTGCGGGCCAAGTGGTCCCCCAGGCCTaGCGTCACGATCTGTCGCAGGTAGGTCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: ALDPAGQVVPQA*RHDLSQVGHLA
Trigger: AGCCAGGTGACCTACCTGCGACAGATCGTGACGGCAGGCCTGGGGGACCACTTGGCCCGCAGGGTCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CCA 72 bp TCCTCCTCAGCTGAGGGCCAGCGGCGACGCTTCCGGTaGGCACCGCTGAGGCTACTGATCTTCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSSAEGQRRRFR*APLRLLIFSWP
Trigger: GGGCCAGGAGAAGATCAGTAGCCTCAGCGGTGCCCACCGGAAGCGTCGCCGCTGGCCCTCAGCTGAGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS CCA 72 bp ATGACCGGCGGCGGCTTGGCGAAGAGCCGTGGGTTCTaGGTGAAGTCCTCCACCCGCAGCGTGGCCGACATG +
Preference number: 6 (lower is better)
Translates to: MTGGGLAKSRGF*VKSSTRSVADM
Trigger: CATGTCGGCCACGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp CACCTTGATGACCGGCGGCGGCTTGGCGAAGAGCCGTaGGTTCTGGGTGAAGTCCTCCACCCGCAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: HLDDRRRLGEEP*VLGEVLHPQRG
Trigger: GCCACGCTGCGGGTGGAGGACTTCACCCAGAACCCACGGCTCTTCGCCAAGCCGCCGCCGGTCATCAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp AGAGAAGCCCCCTGCCCTGCCCAGGTCCTCTTCATCTaGGCCACCCGGGCCCGCTTGCTCTTCAGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: REAPCPAQVLFI*ATRARLLFSLV
Trigger: CACCAGGCTGAAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTGGGCAGGGCAGGGGGCTTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 72 bp TCCAGCATCTCCTCGCTCTGGACCCTGCGGGCCAAGTaGTCCCCCAGGCCTGCCGTCACGATCTGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSISSLWTLRAK*SPRPAVTICRR
Trigger: CCTGCGACAGATCGTGACGGCAGGCCTGGGGGACCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CCA 72 bp GCGTTCCTCCACTTGTCCTCCAGCATCTCCTCGCTCTaGACCCTGCGGGCCAAGTGGTCCCCCAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: AFLHLSSSISSL*TLRAKWSPRPA
Trigger: GGCAGGCCTGGGGGACCACTTGGCCCGCAGGGTCCAGAGCGAGGAGATGCTGGAGGACAAGTGGAGGAACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CCA 72 bp GCTCGCAGAAGGCTCTCCGTACGGGGCTGCAGCCTGTaGGGCAGGAATGCACGTTGGTGGCAGGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARRRLSVRGCSL*GRNARWWQAAR
Trigger: CCTGGCTGCCTGCCACCAACGTGCATTCCTGCCCCACAGGCTGCAGCCCCGTACGGAGAGCCTTCTGCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507267.2
CDS CAA 72 bp GCCCAGGTCCTCTTCATCTGGGCCACCCGGGCCCGCTaGCTCTTCAGCCTGGTGAGCTCCTCGTCACTGGCC +
Preference number: 6 (lower is better)
Translates to: AQVLFIWATRAR*LFSLVSSSSLA
Trigger: GGCCAGTGACGAGGAGCTCACCAGGCTGAAGAGCAAGCGGGCCCGGGTGGCCCAGATGAAGAGGACCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 72 bp GGTAGGTCACCTGGCTCTCGGTGGGCGGCTGCATCTTaGGATCCACGAAGAGCTCAGCCTCGGGGCACACGG +
Preference number: 6 (lower is better)
Translates to: GRSPGSRWAAAS*DPRRAQPRGTR
Trigger: CCGTGTGCCCCGAGGCTGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAGCCAGGTGACCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CCA 72 bp GTCAGGGTGACCCTGGGCCCAGGGACTCTCCTCAGGTaGCAAAAAGCTGGCCAGCAGCCGTGGGGCCAGATC +
Preference number: 6 (lower is better)
Translates to: VRVTLGPGTLLR*QKAGQQPWGQI
Trigger: GATCTGGCCCCACGGCTGCTGGCCAGCTTTTTGCCACCTGAGGAGAGTCCCTGGGCCCAGGGTCACCCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS TCA 72 bp CATGGTGCCGGGGCTGGACAGCAGACAGCTCCGGTATaGGGCCAGCTTGCGGAAGACCTGCCCTTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: HGAGAGQQTAPV*GQLAEDLPFQQ
Trigger: CTGCTGGAAGGGCAGGTCTTCCGCAAGCTGGCCTCATACCGGAGCTGTCTGCTGTCCAGCCCCGGCACCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS GCA 72 bp TTGTCGGCTCAGTGCCAGCATCTTAGCGTAGCGGGGTaGCACGGGGAATGTGGCCATTGTCCGGCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: LSAQCQHLSVAG*HGECGHCPAQR
Trigger: GCGCTGGGCCGGACAATGGCCACATTCCCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp GGTAGGAGACGACCCGCTGGGACAGATTCATCTCCTTaGCCACTCGCTGGGACATGGCCACGGCGGCCACTC +
Preference number: 6 (lower is better)
Translates to: GRRRPAGTDSSP*PLAGTWPRRPL
Trigger: GAGTGGCCGCCGTGGCCATGTCCCAGCGAGTGGCCAAGGAGATGAATCTGTCCCAGCGGGTCGTCTCCTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp GCAGCCCGTTGGCTTCGCAAAACTGGGGTGTGCAGCTaGCATACTCACAGGCTCCCACGGCGCCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: AARWLRKTGVCS*HTHRLPRRPAA
Trigger: TGCTGCTGGGCGCCGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 72 bp CCTGGGCCCAGGGACTCTCCTCAGGTGGCAAAAAGCTaGCCAGCAGCCGTGGGGCCAGATCCTTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: PGPRDSPQVAKS*PAAVGPDPSAK
Trigger: CTTGGCAGAAGGATCTGGCCCCACGGCTGCTGGCCAGCTTTTTGCCACCTGAGGAGAGTCCCTGGGCCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544745.2
CDS CAA 90 bp CGTCATGCTGGCCACGATGGTGATGGCATAGGGCAGGCAGCCGTGTaGTCGGCTCAGTGCCAGCATCTTAGCGTAGCGGGGTGCCACGGG +
Preference number: 6 (lower is better)
Translates to: RHAGHDGDGIGQAAV*SAQCQHLSVAGCHG
Trigger: CCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCATGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS TCA 72 bp GGTCGGTGGTGGCAAGGCCCGGAGCCAGCTCTGCCCTaGCCTCCTAGAAAGTCCCAACCATGCTCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: GRWWQGPEPALP*PPRKSQPCSVL
Trigger: GAGCACTGAGCATGGTTGGGACTTTCTAGGAGGTCAGGGCAGAGCTGGCTCCGGGCCTTGCCACCACCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp GATGGCATAGGGCAGGCAGCCGTGTTGTCGGCTCAGTaGCAGCATCTTAGCGTAGCGGGGTGCCACGGGGAA +
Preference number: 6 (lower is better)
Translates to: DGIGQAAVLSAQ*QHLSVAGCHGE
Trigger: TTCCCCGTGGCACCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp TGTACCGCAGCCCGTTGGCTTCGCAAAACTGGGGTGTaGAGCTGGCATACTCACAGGCTCCCACGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: CTAARWLRKTGV*SWHTHRLPRRP
Trigger: TGGGCGCCGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CAA 72 bp GGCCACGATGGTGATGGCATAGGGCAGGCAGCCGTGTaGTCGGCTCAGTGCCAGCATCTTAGCGTAGCGGGG +
Preference number: 6 (lower is better)
Translates to: GHDGDGIGQAAV*SAQCQHLSVAG
Trigger: CCCCGCTACGCTAAGATGCTGGCACTGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS TCA 72 bp CAAACAGCTCCCGCACCGTCATGCTGGCCACGATGGTaGTGGCATAGGGCAGGCAGCCGTGTTGTCGGCTCA +
Preference number: 6 (lower is better)
Translates to: QTAPAPSCWPRW*WHRAGSRVVGS
Trigger: TGAGCCGACAACACGGCTGCCTGCCCTATGCCATCACCATCGTGGCCAGCATGACGGTGCGGGAGCTGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp CCTTTCTGCTTTCTGGGGCGGTTGCAGGGCACCCAGTaGGATCAACAGCTCCTCGGCGGCAAGAAGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PFCFLGRLQGTQ*DQQLLGGKKGF
Trigger: GAAGCCCTTCTTGCCGCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp CCCAGCGCAGTGATGGGGCAGCTCAGCCGGTTCTCCTaGAGTTGCTTCACCCTTTCTGCTTTCTGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: PSAVMGQLSRFS*SCFTLSAFWGG
Trigger: ACCGCCCCAGAAAGCAGAAAGGGTGAAGCAACTGCAGGAGAACCGGCTGAGCTGCCCCATCACTGCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp AGAAGGACACAGAGCATGGTGACAGGGCCACCACCATaGACCTGGCGCTGGGAGAAGGATCGGCCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: RRTQSMVTGPPP*TWRWEKDRPEE
Trigger: CTCTTCCGGCCGATCCTTCTCCCAGCGCCAGGTGCATGGTGGTGGCCCTGTCACCATGCTCTGTGTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp TTCCGGTGGGCACCGCTGAGGCTACTGATCTTCTCCTaGCCCGGGGCTACCACCTCGTCAGCCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: FRWAPLRLLIFS*PGATTSSAFSL
Trigger: CAAAGAGAAGGCTGACGAGGTGGTAGCCCCGGGCCAGGAGAAGATCAGTAGCCTCAGCGGTGCCCACCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS CCA 72 bp AGGAACACCAGGATGCCACCTGCGGGCAGCATCCGGTaGATCTTGCAGACCTTCCGGAAGCACTCGCCACTG +
Preference number: 6 (lower is better)
Translates to: RNTRMPPAGSIR*ILQTFRKHSPL
Trigger: CAGTGGCGAGTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGCTGCCCGCAGGTGGCATCCTGGTGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp TGGTCAGCTGGCCCCGCAGGCGCCGGATCTCCATCATaGCTTTGTACCGCAGCCCGTTGGCTTCGCAAAACT +
Preference number: 6 (lower is better)
Translates to: WSAGPAGAGSPS*LCTAARWLRKT
Trigger: AGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGCGCCTGCGGGGCCAGCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 72 bp AAACCGAGCGACGACCTGGTGGGGGAGGGTGCAGGCTaGCAGCTCGAATCTGTTAGTGCCCTGCTCATGTGC +
Preference number: 6 (lower is better)
Translates to: KPSDDLVGEGAG*QLESVSALLMC
Trigger: GCACATGAGCAGGGCACTAACAGATTCGAGCTGCCAGCCTGCACCCTCCCCCACCAGGTCGTCGCTCGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp CGTTCAATACGGGAACAGGACAGCCGGCGGGTGCCCTaGCCTCATCCTTCCCTTCTCTTGCCTGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: RSIREQDSRRVP*PHPSLLLPGRQ
Trigger: CTGCCTTCCAGGCAAGAGAAGGGAAGGATGAGGCCAGGGCACCCGCCGGCTGTCCTGTTCCCGTATTGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 72 bp CGTCTGTGGCCGGCGTGGTCGCCAGCACACTGCCCTTaGTTGTTCAAGGCATGGCCACTCAGTGGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: RLWPAWSPAHCP*LFKAWPLSGGH
Trigger: ATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS CAA 90 bp TGCATCTTGGGATCCACGAAGAGCTCAGCCTCGGGGCACACGGCATaGACTGAGGGGAGAACCAAGAGTGAGGTCGGTGGTGGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: CILGSTKSSASGHTA*TEGRTKSEVGGGKA
Trigger: GGCCTTGCCACCACCGACCTCACTCTTGGTTCTCCCCTCAGTCAATGCCGTGTGCCCCGAGGCTGAGCTCTTCGTGGATCCCAAGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS TCA 72 bp GATCCACGAAGAGCTCAGCCTCGGGGCACACGGCATTaGCTGAGGGGAGAACCAAGAGTGAGGTCGGTGGTG +
Preference number: 6 (lower is better)
Translates to: DPRRAQPRGTRH*LRGEPRVRSVV
Trigger: CACCACCGACCTCACTCTTGGTTCTCCCCTCAGTCAATGCCGTGTGCCCCGAGGCTGAGCTCTTCGTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp CCAGGATGCCACCTGCGGGCAGCATCCGGTGGATCTTaGAGACCTTCCGGAAGCACTCGCCACTGTAGTCTT +
Preference number: 6 (lower is better)
Translates to: PGCHLRAASGGS*RPSGSTRHCSL
Trigger: AAGACTACAGTGGCGAGTGCTTCCGGAAGGTCTGCAAGATCCACCGGATGCTGCCCGCAGGTGGCATCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp TGCAGTTGCTTCACCCTTTCTGCTTTCTGGGGCGGTTaGAGGGCACCCAGTGCGATCAACAGCTCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: CSCFTLSAFWGG*RAPSAINSSSA
Trigger: CGCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp GAAAGGCGTCTGTGGCCGGCGTGGTCGCCAGCACACTaGCCTTTGTTGTTCAAGGCATGGCCACTCAGTGGT +
Preference number: 6 (lower is better)
Translates to: ERRLWPAWSPAH*PLLFKAWPLSG
Trigger: ACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACGCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS CCA 72 bp CACCCGCAGCGTGGCCGACATGATGAGCAGCTTGAGTaGCAGGTTCCTCTTAGCCCGGAGAGTCACAATGCG +
Preference number: 6 (lower is better)
Translates to: HPQRGRHDEQLE*QVPLSPESHNA
Trigger: CGCATTGTGACTCTCCGGGCTAAGAGGAACCTGCCACTCAAGCTGCTCATCATGTCGGCCACGCTGCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp CTCCGGTGGAGGCTTAAAGACCTGTGCTTGCTTCTCTaGGGCCAGCAGAGAGTACAGCGGGAGCACGTGGAG +
Preference number: 6 (lower is better)
Translates to: LRWRLKDLCLLL*GQQRVQREHVE
Trigger: CTCCACGTGCTCCCGCTGTACTCTCTGCTGGCCCCAGAGAAGCAAGCACAGGTCTTTAAGCCTCCACCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp TCACGATCTGTCGCAGGTAGGTCACCTGGCTCTCGGTaGGCGGCTGCATCTTGGGATCCACGAAGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: SRSVAGRSPGSR*AAASWDPRRAQ
Trigger: CTGAGCTCTTCGTGGATCCCAAGATGCAGCCGCCCACCGAGAGCCAGGTGACCTACCTGCGACAGATCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000542400.5
ENST00000544745.2
CDS CAA 72 bp TCCTCCACCCGCAGCGTGGCCGACATGATGAGCAGCTaGAGTGGCAGGTTCCTCTTAGCCCGGAGAGTCACA +
Preference number: 6 (lower is better)
Translates to: SSTRSVADMMSS*SGRFLLARRVT
Trigger: TGTGACTCTCCGGGCTAAGAGGAACCTGCCACTCAAGCTGCTCATCATGTCGGCCACGCTGCGGGTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp CTGCAGTTGCTTCACCCTTTCTGCTTTCTGGGGCGGTaGCAGGGCACCCAGTGCGATCAACAGCTCCTCGGC +
Preference number: 6 (lower is better)
Translates to: LQLLHPFCFLGR*QGTQCDQQLLG
Trigger: GCCGAGGAGCTGTTGATCGCACTGGGTGCCCTGCAACCGCCCCAGAAAGCAGAAAGGGTGAAGCAACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp GGATCCACGAAGAGCTCAGCCTCGGGGCACACGGCATaGACTGAGGGGAGAACCAAGAGTGAGGTCGGTGGT +
Preference number: 6 (lower is better)
Translates to: GSTKSSASGHTA*TEGRTKSEVGG
Trigger: ACCACCGACCTCACTCTTGGTTCTCCCCTCAGTCAATGCCGTGTGCCCCGAGGCTGAGCTCTTCGTGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 90 bp GAAAGGCGTCTGTGGCCGGCGTGGTCGCCAGCACACTGCCCTTTGTaGTTCAAGGCATGGCCACTCAGTGGTGGCCATTTATTCGGGGGT +
Preference number: 6 (lower is better)
Translates to: ERRLWPAWSPAHCPL*FKAWPLSGGHLFGG
Trigger: ACCCCCGAATAAATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACGCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS CAA 90 bp GGAGAAAGGCGTCTGTGGCCGGCGTGGTCGCCAGCACACTGCCCTTaGTTGTTCAAGGCATGGCCACTCAGTGGTGGCCATTTATTCGGG +
Preference number: 6 (lower is better)
Translates to: GERRLWPAWSPAHCP*LFKAWPLSGGHLFG
Trigger: CCCGAATAAATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCACGCCGGCCACAGACGCCTTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS GCA 72 bp CCGCTGCCGGTCTCACCACACACGATGACGATGGGGTaGTCGGCCACAGCCTCCATGATTACTTGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: PLPVSPHTMTMG*SATASMITCSS
Trigger: CGAAGAACAAGTAATCATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGTGTGTGGTGAGACCGGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp ATGGCTTTGTACCGCAGCCCGTTGGCTTCGCAAAACTaGGGTGTGCAGCTGGCATACTCACAGGCTCCCACG +
Preference number: 6 (lower is better)
Translates to: MALYRSPLASQN*GVQLAYSQAPT
Trigger: CGTGGGAGCCTGTGAGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CAA 72 bp TTGATGCCAGGGATGGTAAGCGACGTCTCGGCCACATaGGTGGCCACAACACACAACCGAGTCCCCTCCGGT +
Preference number: 6 (lower is better)
Translates to: LMPGMVSDVSAT*VATTHNRVPSG
Trigger: ACCGGAGGGGACTCGGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTCGCTTACCATCCCTGGCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp CGCCGGATCTCCATCATGGCTTTGTACCGCAGCCCGTaGGCTTCGCAAAACTGGGGTGTGCAGCTGGCATAC +
Preference number: 6 (lower is better)
Translates to: RRISIMALYRSP*ASQNWGVQLAY
Trigger: GTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CAA 90 bp ACCACGTACTTGATGCCAGGGATGGTAAGCGACGTCTCGGCCACATaGGTGGCCACAACACACAACCGAGTCCCCTCCGGTGGAGGCTTA +
Preference number: 6 (lower is better)
Translates to: TTYLMPGMVSDVSAT*VATTHNRVPSGGGL
Trigger: TAAGCCTCCACCGGAGGGGACTCGGTTGTGTGTTGTGGCCACCAATGTGGCCGAGACGTCGCTTACCATCCCTGGCATCAAGTACGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp AACGTGGCCTGCCCAGAAGAGACCCAGTGTCCACGCTaGCCTCTCTACGCATCGTCCTCTTGCCATATGTTG +
Preference number: 6 (lower is better)
Translates to: NVACPEETQCPR*PLYASSSCHML
Trigger: CAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp AAATTCTCCACTAGCCTTGGGTGCAAGAACGTGGCCTaGCCAGAAGAGACCCAGTGTCCACGCTGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: KFSTSLGCKNVA*PEETQCPRCPL
Trigger: GAGAGGGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCCAAGGCTAGTGGAGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp ATTGGTGGCCACAACACACAACCGAGTCCCCTCCGGTaGAGGCTTAAAGACCTGTGCTTGCTTCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: IGGHNTQPSPLR*RLKDLCLLLWG
Trigger: GCCCCAGAGAAGCAAGCACAGGTCTTTAAGCCTCCACCGGAGGGGACTCGGTTGTGTGTTGTGGCCACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308736.7
ENST00000543962.1
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp GCCGGATCTCCATCATGGCTTTGTACCGCAGCCCGTTaGCTTCGCAAAACTGGGGTGTGCAGCTGGCATACT +
Preference number: 6 (lower is better)
Translates to: AGSPSWLCTAAR*LRKTGVCSWHT
Trigger: AGTATGCCAGCTGCACACCCCAGTTTTGCGAAGCCAACGGGCTGCGGTACAAAGCCATGATGGAGATCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000544745.2
CDS CCA 72 bp AAGGCAAATTCTCCACTAGCCTTGGGTGCAAGAACGTaGCCTGCCCAGAAGAGACCCAGTGTCCACGCTGCC +
Preference number: 6 (lower is better)
Translates to: KANSPLALGART*PAQKRPSVHAA
Trigger: GGCAGCGTGGACACTGGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCCAAGGCTAGTGGAGAATTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp CCAACTACCTCCTCAGCCCAAGAGGTGACCTTAGGATaGAAGGCACAGCGAATGGCAGGAGGATGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PTTSSAQEVTLG*KAQRMAGGWQQ
Trigger: CTGCTGCCATCCTCCTGCCATTCGCTGTGCCTTCCATCCTAAGGTCACCTCTTGGGCTGAGGAGGTAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS TCA 72 bp TCCCTGGGTGTTGGTGGCAGGAAGTATTTGTGCTGCTaGGCTGAGGTAGAGTCCAGGGCAAGGCCTCATCCT +
Preference number: 6 (lower is better)
Translates to: SLGVGGRKYLCC*AEVESRARPHP
Trigger: AGGATGAGGCCTTGCCCTGGACTCTACCTCAGCTCAGCAGCACAAATACTTCCTGCCACCAACACCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp AGCACTGTCTGGAGGCTGACTGCAATTCTAAGCTGCTaGACCTGGAATGGGGCTGCTCTGGAAAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: STVWRLTAILSC*TWNGAALESHS
Trigger: GCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp ACCAGCACTGTCTGGAGGCTGACTGCAATTCTAAGCTaGTGCACCTGGAATGGGGCTGCTCTGGAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: TSTVWRLTAILS*CTWNGAALESH
Trigger: GTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp CCAAGCCACTGTAACCAGCACTGTCTGGAGGCTGACTaGAATTCTAAGCTGCTGCACCTGGAATGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PSHCNQHCLEAD*NSKLLHLEWGC
Trigger: GCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGACAGTGCTGGTTACAGTGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp GGGCCAGGCTTTCTCGATATCGGGGTGCATGGCCTGTaGAAGCCACTCACAGTACTCAGCCAGCAGGTATTT +
Preference number: 6 (lower is better)
Translates to: GPGFLDIGVHGL*KPLTVLSQQVF
Trigger: AAATACCTGCTGGCTGAGTACTGTGAGTGGCTTCCACAGGCCATGCACCCCGATATCGAGAAAGCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000507267.2
ENST00000542400.5
CDS CCA 72 bp TGGTCGCCAGCACACTGCCCTTTGTTGTTCAAGGCATaGCCACTCAGTGGTGGCCATTTATTCGGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: WSPAHCPLLFKA*PLSGGHLFGGE
Trigger: CTCACCCCCGAATAAATGGCCACCACTGAGTGGCCATGCCTTGAACAACAAAGGGCAGTGTGCTGGCGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543962.1
CDS CCA 72 bp GTCTGGAGGCTGACTGCAATTCTAAGCTGCTGCACCTaGAATGGGGCTGCTCTGGAAAGCCACAGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: VWRLTAILSCCT*NGAALESHSQK
Trigger: CTTCTGGCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTCAGCCTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 90 bp CAGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTTGCCATATGTaGGAGGACATTTCCTTCCTCTCAAGCTTCCCTGGGTGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: QCPRCPLYASSSCHM*EDISFLSSFPGCWW
Trigger: CCACCAACACCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS TCA 72 bp CCCAGGTGGCCTCAGACTCAGTTCTGGTCCATGATGTaGAGAAGGAAGTTGCGGCTGGAATTCCTGGGAACG +
Preference number: 6 (lower is better)
Translates to: PRWPQTQFWSMM*RRKLRLEFLGT
Trigger: CGTTCCCAGGAATTCCAGCCGCAACTTCCTTCTTCACATCATGGACCAGAACTGAGTCTGAGGCCACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp GACTGCAATTCTAAGCTGCTGCACCTGGAATGGGGCTaGTCTGGAAAGCCACAGCCAGAAGGACACAGAGCA +
Preference number: 6 (lower is better)
Translates to: DCNSKLLHLEWG*SGKPQPEGHRA
Trigger: TGCTCTGTGTCCTTCTGGCTGTGGCTTTCCAGAGCAGCCCCATTCCAGGTGCAGCAGCTTAGAATTGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 72 bp GACGATGGGGTGCTCGGCCACAGCCTCCATGATTACTaGTTCTTCGGAGAGAATTGGGAGCTTCAGCCGTTC +
Preference number: 6 (lower is better)
Translates to: DDGVLGHSLHDY*FFGENWELQPF
Trigger: GAACGGCTGAAGCTCCCAATTCTCTCCGAAGAACAAGTAATCATGGAGGCTGTGGCCGAGCACCCCATCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp CGCTGCCCTCTCTACGCATCGTCCTCTTGCCATATGTaGGAGGACATTTCCTTCCTCTCAAGCTTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: RCPLYASSSCHM*EDISFLSSFPG
Trigger: CCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 90 bp ACACACGATGACGATGGGGTGCTCGGCCACAGCCTCCATGATTACTaGTTCTTCGGAGAGAATTGGGAGCTTCAGCCGTTCCTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: THDDDGVLGHSLHDY*FFGENWELQPFLLH
Trigger: ATGCAGGAGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAACAAGTAATCATGGAGGCTGTGGCCGAGCACCCCATCGTCATCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 90 bp AGAAGAGACCCAGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTaGCCATATGTTGGAGGACATTTCCTTCCTCTCAAGCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: RRDPVSTLPSLRIVL*PYVGGHFLPLKLPW
Trigger: CCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTGGGTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS TCA 72 bp ACTCGCCACTGTAGTCTTCCAGCGGTGTCCGCTTGTTaGAATGCACAGTCACTGGGAACTGCCTGGATTCCA +
Preference number: 6 (lower is better)
Translates to: TRHCSLPAVSAC*NAQSLGTAWIP
Trigger: TGGAATCCAGGCAGTTCCCAGTGACTGTGCATTTCAACAAGCGGACACCGCTGGAAGACTACAGTGGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS GCA 72 bp AGGGTGCAGGCTGGCAGCTCGAATCTGTTAGTGCCCTaGTCATGTGCACATTCCCTTGTTCCTGGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: RVQAGSSNLLVP*SCAHSLVPGKA
Trigger: AGCTTTTCCAGGAACAAGGGAATGTGCACATGAGCAGGGCACTAACAGATTCGAGCTGCCAGCCTGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS GCA 72 bp CAGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTTaGCATATGTTGGAGGACATTTCCTTCCTCTCAAGC +
Preference number: 6 (lower is better)
Translates to: QCPRCPLYASSS*HMLEDISFLSS
Trigger: GCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp GCTGCCCTCTCTACGCATCGTCCTCTTGCCATATGTTaGAGGACATTTCCTTCCTCTCAAGCTTCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AALSTHRPLAIC*RTFPSSQASLG
Trigger: ACCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 72 bp CCAGTGTCCACGCTGCCCTCTCTACGCATCGTCCTCTaGCCATATGTTGGAGGACATTTCCTTCCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: PVSTLPSLRIVL*PYVGGHFLPLK
Trigger: CTTGAGAGGAAGGAAATGTCCTCCAACATATGGCAAGAGGACGATGCGTAGAGAGGGCAGCGTGGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CCA 72 bp CACAGCCTCCATGATTACTTGTTCTTCGGAGAGAATTaGGAGCTTCAGCCGTTCCTCCTGCATTTCCGGGGA +
Preference number: 6 (lower is better)
Translates to: HSLHDYLFFGEN*ELQPFLLHFRG
Trigger: TCCCCGGAAATGCAGGAGGAACGGCTGAAGCTCCCAATTCTCTCCGAAGAACAAGTAATCATGGAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp GATCTGCTTAAATGGAAGGCAAATTCTCCACTAGCCTaGGGTGCAAGAACGTGGCCTGCCCAGAAGAGACCC +
Preference number: 6 (lower is better)
Translates to: DLLKWKANSPLA*GARTWPAQKRP
Trigger: GGGTCTCTTCTGGGCAGGCCACGTTCTTGCACCCAAGGCTAGTGGAGAATTTGCCTTCCATTTAAGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 90 bp CTTTGGTCTTCTTTTTCTTCTTCCCCGGTAGAACGAGCGCGTTGCTaGCATCAACTCCCTTCAACGTGTCCTTGTCCTCCAGTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LWSSFSSSPVERARC*HQLPSTCPCPPVPA
Trigger: AGCTGGAACTGGAGGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGACCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS GCA 72 bp TCAACAGGCCTCCGGGTGATTTCTGGAGGAGGAAACTaGTCGAAGTCACCAAAAACCGCAGATGAATACAGC +
Preference number: 6 (lower is better)
Translates to: STGLRVISGGGN*SKSPKTADEYS
Trigger: GCTGTATTCATCTGCGGTTTTTGGTGACTTCGAGCAGTTTCCTCCTCCAGAAATCACCCGGAGGCCTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp TCTTTTTCTTCTTCCCCGGTAGAACGAGCGCGTTGCTaGCATCAACTCCCTTCAACGTGTCCTTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SFSSSPVERARC*HQLPSTCPCPP
Trigger: TGGAGGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS CAA 72 bp GTCTTCTTTTTCTTCTTCCCCGGTAGAACGAGCGCGTaGCTTGCATCAACTCCCTTCAACGTGTCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VFFFFFPGRTSA*LASTPFNVSLS
Trigger: GGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS GCA 72 bp TCTTCTTTTTCTTCTTCCCCGGTAGAACGAGCGCGTTaGTTGCATCAACTCCCTTCAACGTGTCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SSFSSSPVERAR*LHQLPSTCPCP
Trigger: AGGACAAGGACACGTTGAAGGGAGTTGATGCAAGCAACGCGCTCGTTCTACCGGGGAAGAAGAAAAAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS CCA 72 bp TATGTTGGAGGACATTTCCTTCCTCTCAAGCTTCCCTaGGTGTTGGTGGCAGGAAGTATTTGTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: YVGGHFLPLKLP*VLVAGSICAAE
Trigger: CTCAGCAGCACAAATACTTCCTGCCACCAACACCCAGGGAAGCTTGAGAGGAAGGAAATGTCCTCCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 90 bp AAGTCCTTCTGGATTTCTTTAAGCAGCACACCATCCGTCATGAACTaGATTCTGGTCTCCTCTGTCACGTTTCCTTCATACCGGATCTGG +
Preference number: 6 (lower is better)
Translates to: KSFWISLSSTPSVMN*ILVSSVTFPSYRIW
Trigger: CCAGATCCGGTATGAAGGAAACGTGACAGAGGAGACCAGAATCAAGTTCATGACGGATGGTGTGCTGCTTAAAGAAATCCAGAAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS TCA 72 bp TCATTTGAAGGATTAAGTCTTCAACAGGCCTCCGGGTaGTTTCTGGAGGAGGAAACTGCTCGAAGTCACCAA +
Preference number: 6 (lower is better)
Translates to: SFEGLSLQQASG*FLEEETARSHQ
Trigger: TTGGTGACTTCGAGCAGTTTCCTCCTCCAGAAATCACCCGGAGGCCTGTTGAAGACTTAATCCTTCAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CCA 72 bp GGCCGGAAGAGAGCCATCAATTCTGGCATCAAACCTTaGGATCTGCTTAAATGGAAGGCAAATTCTCCACTA +
Preference number: 6 (lower is better)
Translates to: GRKRAINSGIKP*DLLKWKANSPL
Trigger: TAGTGGAGAATTTGCCTTCCATTTAAGCAGATCCCAAGGTTTGATGCCAGAATTGATGGCTCTCTTCCGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542400.5
CDS CAA 72 bp TGTTCTAAGATTTTCTGCAGCACTTTCTTCTCCTTCTaGGTCAGAGGCTTCTTCTCCTTCTTCGACAGGGGA +
Preference number: 6 (lower is better)
Translates to: CSKIFCSTFFSF*VRGFFSFFDRG
Trigger: TCCCCTGTCGAAGAAGGAGAAGAAGCCTCTGACCAAGAAGGAGAAGAAAGTGCTGCAGAAAATCTTAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308736.7
ENST00000679875.1
CDS TCA 72 bp AAGTTGATGACCTTTTCAACGTTGAGCGCCTTCATTTaGAGGATTAAGTCTTCAACAGGCCTCCGGGTGATT +
Preference number: 6 (lower is better)
Translates to: KLMTFSTLSAFI*RIKSSTGLRVI
Trigger: AATCACCCGGAGGCCTGTTGAAGACTTAATCCTTCAAATGAAGGCGCTCAACGTTGAAAAGGTCATCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1
CDS CAA 72 bp TGGATTTCTTTAAGCAGCACACCATCCGTCATGAACTaGATTCTGGTCTCCTCTGTCACGTTTCCTTCATAC +
Preference number: 6 (lower is better)
Translates to: WISLSSTPSVMN*ILVSSVTFPSY
Trigger: GTATGAAGGAAACGTGACAGAGGAGACCAGAATCAAGTTCATGACGGATGGTGTGCTGCTTAAAGAAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308736.7
ENST00000544745.2
ENST00000679875.1