Pregenerated sensors for DHDH (Homo sapiens)
Ensembl gene IDs: ENSG00000104808Ensembl transcript IDs: ENST00000221403.7, ENST00000520557.1, ENST00000522614.5, ENST00000523250.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGACTTTCCTTCATACCCTTGCGTAGGCACTCCCAGACGTGCTTaGCCTCATAACTCATGCCTGCCCCGTTGTCAAAATTGCAGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: QDFPSYPCVGTPRRA*PHNSCLPRCQNCSP Trigger: AGGACTGCAATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGACTTTCCTTCATACCCTTGCGTAGGCACTCCCAGACGTGCTTGGCCTCAAGCGGGAACTCCTTATaGTCCCCCTTCACCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TGLSFIPLRRHSQTCLASSGNSL*SPFTTS Trigger: GCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCT...TGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAGTCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTCATACCTCATAACTCATGCCTaGCCCGTTGTCAAAATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CQPGAHFPTGESQDFPSYLITHA*PVVKIA Trigger: TGCAATTTTGACAACGGGGCAGGCATGAGTTATGAG...GTATGAAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR CAA 90 bp | GATGTAAGATGTCTTTATTTATTCGGGGATACATCAGCGTTTGTCTaGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: DVRCLYLFGDTSAFV*GEGDSNGLPHLFKD Trigger: ATCCTTGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATGTATCCCCGAATAAATAAAGACATCTTACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR GCA 72 bp | CAGTCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATaGTCCCCCTTCACCACCAGCTCGGTCGGGCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSFGTGGSGNSL*SPFTTSSVGHQ Trigger: CTGGTGCCCGACCGAGCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCGTTTGTCTTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCAAGCAAAATTGCAGTCCTTaGGGACTGGGGGCAGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAFVLGEGDSNGLPHLFKQNCSP*GLGAAG Trigger: TCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTTTG...CTTGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR GCA 72 bp | GCACTCCCAGACGTGCTTGGCCTCATAACTCATGCCTaGCCCGTTGTCAAAATTGCAGTCCTTTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALPDVLGLITHA*PVVKIAVLWDW Trigger: CCAGTCCCAAAGGACTGCAATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR-3UTR CAA 90 bp | CATCAGCGTTTGTCTTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCACTTTCCTTCATACCCTaGCGTAGGCACTCCCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: HQRLSWGKVTPMAFLTSSLSFIP*RRHSQT Trigger: CGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAG...TGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR GCA 72 bp | GTAGGCACTCCCAGACGTGCTTGGCCTCATAACTCATaGCTGCCCCGTTGTCAAAATTGCAGTCCTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGTPRRAWPHNS*LPRCQNCSPLG Trigger: TCCCAAAGGACTGCAATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR CCA 72 bp | CCTTCATACCCTTGCGTAGGCACTCCCAGACGTGCTTaGCCTCATAACTCATGCCTGCCCCGTTGTCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSYPCVGTPRRA*PHNSCLPRCQN Trigger: ATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR-3UTR CAA 90 bp | AAGGATGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTGCCCCGTTGTCAAAATaGCAGTCCTTTGGGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KDVSQELTFRQGNHRTFLAPLSK*QSFGTG Trigger: CCCAGTCCCAAAGGACTGCAATTTTGACAACGGGGC...AAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR CCA 72 bp | GTCTTTATTTATTCGGGGATACATCAGCGTTTGTCTTaGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFIYSGIHQRLS*GKVTPMAFLTS Trigger: AGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATGTATCCCCGAATAAATAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCCCTTCACCACCAGCTCGGTCGGGCACCAGCAGGGGTTGAGGAGCTGTGCCACCGCCACCACCTaGTGCTCAGAGCGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSPFTTSSVGHQQGLRSCATATT*CSERGS Trigger: GCTGCCTCGCTCTGAGCACCAGGTGGTGGCGGTGGC...ACAGCTCCTCAACCCCTGCTGGTGCCCGACCGAGCTGGTGGTGAAGGGGGAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | CGGGAACTCCTTATGCTCCCCCTTCACCACCAGCTCGGTCGGGCACCAGCAGGGACTGGACACAGTAGATaGCGATGTCCAGCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RELLMLPLHHQLGRAPAGTGHSR*RCPAGP Trigger: GGGCCCTGCTGGACATCGGCATCTACTGTGTCCAGT...CCCTGCTGGTGCCCGACCGAGCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | TTGCAGTCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCACCCCACGCTCGGGTCCTTaGCCAGCTCCTCATAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSFGTGGSGNSLCSPFTPRSGP*PAPHRS Trigger: GCTCCTATGAGGAGCTGGCCAAGGACCCGAGCGTGG...GGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | TACCCTTGCGTAGGCACTCCCAGACGTGCTTGGCCTCATAACTCATGCCTGCCCGCAGTCCTTTGGGACTaGGGGCAGCGGGAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YPCVGTPRRAWPHNSCLPAVLWD*GQRELL Trigger: AAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGC...GGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | ACAGGACTTTCCTTCATACCCTTGCGTAGGCACTCCCAGACGTGCTTGGCCTCAGAGCGAGGCAGCGTCTaGAGCACGGCTGTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGLSFIPLRRHSQTCLASERGSV*STAVKS Trigger: CGACTTCACAGCCGTGCTGCAGACGCTGCCTCGCTC...TGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAGTCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | AAGGATGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTACCGCCACCACCTGGTaGTCAGAGCGAGGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDVSQELTFRQGNHRTFLTATTW*SERGSV Trigger: GACGCTGCCTCGCTCTGAGCACCAGGTGGTGGCGGT...AAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | GGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCACCACCAGCTCGGTCGCTCATAACTCATGCCTaGCCCGTTGTCAAAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGAAGTPYAPPSPPARSLITHA*PVVKIA Trigger: TGCAATTTTGACAACGGGGCAGGCATGAGTTATGAG...CGACCGAGCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | TGCGTAGGCACTCCCAGACGTGCTTGGCCTCATAACTCATGCCTGCCCCGTTGTCCCCGTTGTCAAAATTaGAGTCCTTTGGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVGTPRRAWPHNSCLPRCPRCQN*SPLGLG Trigger: CCCCAGTCCCAAAGGACTGCAATTTTGACAACGGGG...ACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR TCA 90 bp | AAATTGCAGTCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCCCCGGGGAACGTGGATaGGATTCTTCCCAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLQSFGTGGSGNSLCSPFPGERG*DSSQIL Trigger: CAGAATTTGGGAAGAATCTCATCCACGTTCCCCGGG...GAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | TTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGATTCTTCCCAAATTCTaGCCGAGCCACCCGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGEGDSNGLPHLFKDVSQILPKF*PSHPEV Trigger: GACCTCCGGGTGGCTCGGGCAGAATTTGGGAAGAAT...CTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | CCCAGACGTGCTTGGCCTCATAACTCATGCCTGCCCCGTTGTCAAAATTGCAGTAGCGGGAACTCCTTATaGTCCCCCTTCACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRRAWPHNSCLPRCQNCSSGNSL*SPFTTS Trigger: GCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCT...ACTGCAATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | AAATTGCAGTCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCACGGCCCGGGGAACGTaGATGAGATTCTTCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSFGTGGSGNSLCSPFTARGT*MRFFPN Trigger: ATTTGGGAAGAATCTCATCCACGTTCCCCGGGCCGT...GAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | TACCCTTGCGTAGGCACTCCCAGACGTGCTTGGCCTCATAACTCATGCCTGCCCCATCAGCGTTTGTCTTaGGGGAAGGTGACTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YPCVGTPRRAWPHNSCLPHQRLS*GKVTPM Trigger: CATTGGAGTCACCTTCCCCCAAGACAAACGCTGATG...GGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGTGCCTACGCAAGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | ACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGGAGCTCACTTTCCAGGAGCCGTAGGCCTTaGGGATGTCGTGTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPMAFLTSSRMSARSSLSRSRRP*GCRVSV Trigger: CACAGAAACACGACATCCCCAAGGCCTACGGCTCCT...GGAAAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | AAATTGCAGTCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCTGGCCTCATAACTCATaGCTGCCCCGTTGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQSFGTGGSGNSLCSPFWPHNS*LPRCQN Trigger: ATTTTGACAACGGGGCAGGCATGAGTTATGAGGCCA...GAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | TCAGCGTTTGTCTTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCAAGAAAATTGCAGTCCTTTaGGACTGGGGGCAGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFVLGEGDSNGLPHLFKKIAVL*DWGQRE Trigger: TTCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTTT...CTTGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | GACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGGAGCTCACTTTCACTCCCAGACGTGCTTaGCCTCATAACTCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSNGLPHLFKDVSQELTFTPRRA*PHNSCL Trigger: CAGGCATGAGTTATGAGGCCAAGCACGTCTGGGAGT...GAAAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGGAGCTCACTTTCTCCTAGAGTTCCCTaGGCCAAAACAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTPMAFLTSSRMSARSSLSPRVP*AKTDLR Trigger: TCTGAGGTCTGTTTTGGCCCAGGGAACTCTAGGAGA...AAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | AAGGATGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTATCTTCTCTGGCTTCTaGCCTCCAAAGACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KDVSQELTFRQGNHRTFLIFSGF*PPKTME Trigger: CTCCATGGTCTTTGGAGGGCAGAAGCCAGAGAAGAT...AAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR GCA 90 bp | TGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTCATACTTTCCTTCATACCCTTaGGTAGGCACTCCCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: CQPGAHFPTGESQDFPSYFPSYP*VGTPRR Trigger: ACGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAA...GTATGAAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CCA 90 bp | ACATCAGCGTTTGTCTTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCGACAGAAATCTTCTCTaGCTTCTGCCCTCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSAFVLGEGDSNGLPHLFDRNLL*LLPSKD Trigger: GTCTTTGGAGGGCAGAAGCCAGAGAAGATTTCTGTC...GAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| 3UTR CAA 72 bp | TGTCTTTATTTATTCGGGGATACATCAGCGTTTGTCTaGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLFGDTSAFV*GEGDSNGLPHL Trigger: GAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATGTATCCCCGAATAAATAAAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS GCA 90 bp | CTTCCGCCGCGTTCACGCCCGTGGGCTTCTCGCACAGAACGGCCTTaGCCGCCGCCAAGCACAGCATCACCGCCGCCTTGTGCTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPPRSRPWASRTERP*PPPSTASPPPCAGG Trigger: ACCCCCAGCACAAGGCGGCGGTGATGCTGTGCTTGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACGCGGCGGAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS CCA 90 bp | GGGCCTCCGCGACCATCTCGCGAACTTCCGCCGCGTTCACGCCCGTaGGCTTCTCGCACAGAACGGCCTTGCCCGCCGCCAAGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPPRPSRELPPRSRP*ASRTERPCPPPSTA Trigger: TGCTGTGCTTGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACGCGGCGGAAGTTCGCGAGATGGTCGCGGAGGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS GCA 90 bp | CGGGCCGCCACCGCCACCACCTGGTGCTCAGAGCGAGGCAGCGTCTaGAGCACGGCTGTGAAGTCGCTGGAGATGAGGCCGACAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: RAATATTWCSERGSV*STAVKSLEMRPTDT Trigger: CGTGTCTGTCGGCCTCATCTCCAGCGACTTCACAGCCGTGCTGCAGACGCTGCCTCGCTCTGAGCACCAGGTGGTGGCGGTGGCGGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000221403.7 ENST00000522614.5 ENST00000523250.5 |
||
| CDS GCA 90 bp | TGTACCATGCCCTTGGTGCCGCTCACGGAGGCCGTGTTGGAGAGCTaGACGGTGATGCTGCAGGTGAAGCTGCCATGGACCTCCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTMPLVPLTEAVLES*TVMLQVKLPWTSPG Trigger: CCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTCTCCAACACGGCCTCCGTGAGCGGCACCAAGGGCATGGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS GCA 90 bp | CAGCTCCTCATAGGAGCCGTAGGCCTTGGGGATGTCGTGTTTCTGTaGAAACTCCTTCGCACGGCTCAGATCGCGGGCCGCCACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLLIGAVGLGDVVFL*KLLRTAQIAGRHRH Trigger: GTGGCGGTGGCGGCCCGCGATCTGAGCCGTGCGAAGGAGTTTGCACAGAAACACGACATCCCCAAGGCCTACGGCTCCTATGAGGAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221403.7 ENST00000520557.1 ENST00000522614.5 ENST00000523250.5 |
||
| CDS GCA 90 bp | ACGGTGATGCTGCAGGTGAAGCTGCCATGGACCTCCCCTGGGTACTaGAGGAGCACCGTGACAGTGTCATCCACACCCACGCTCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVMLQVKLPWTSPGY*RSTVTVSSTPTLGS Trigger: GGACCCGAGCGTGGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523250.5 |
||
| CDS CCA 90 bp | GAGCTGCACGGTGATGCTGCAGGTGAAGCTGCCATGGACCTCCCCTaGGTACTGCAGGAGCACCGTGACAGTGTCATCCACACCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELHGDAAGEAAMDLP*VLQEHRDSVIHTHA Trigger: AGCGTGGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523250.5 |
||
| CDS CCA 90 bp | CCACGCTCGGGTCCTTGGCCAGCTCCTCATAGGAGCCGTAGGCCTTaGGGATGTCGTGTTTCTGTGCAAACTCCTTCGCACGGCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRSGPWPAPHRSRRP*GCRVSVQTPSHGSD Trigger: ATCTGAGCCGTGCGAAGGAGTTTGCACAGAAACACGACATCCCCAAGGCCTACGGCTCCTATGAGGAGCTGGCCAAGGACCCGAGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221403.7 ENST00000520557.1 ENST00000522614.5 ENST00000523250.5 |
||
| CDS CCA 90 bp | GAGCTGCACGGTGATGCTGCAGGTGAAGCTGCCATGGACCTCCCCTaGGTACTGCAGGAGCACCGTGACAGTGTCATCCACACCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELHGDAAGEAAMDLP*VLQEHRDSVIHTCF Trigger: GAAACAGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221403.7 |
||
| CDS-3UTR CAA 90 bp | TCCTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCACCACCAGCCTTTCCTTCATACCCTaGCGTAGGCACTCCCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SFGTGGSGNSLCSPFTTSLSFIP*RRHSQT Trigger: CGTCTGGGAGTGCCTACGCAAGGGTATGAAGGAAAG...GCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGACTGGGGGCAGCGGGAACTCCTTATGCTCCCCCTTCACCACCAGCTCACATCAGCGTTTGTCTaGGGGGAAGGTGACTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LWDWGQRELLMLPLHHQLTSAFV*GEGDSN Trigger: ATTGGAGTCACCTTCCCCCAAGACAAACGCTGATGT...GAGCTGGTGGTGAAGGGGGAGCATAAGGAGTTCCCGCTGCCCCCAGTCCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | CATCAGCGTTTGTCTTGGGGGAAGGTGACTCCAATGGCCTTCCTCACCTCTTCACAAAATTGCAGTCCTTaGGGACTGGGGGCAGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQRLSWGKVTPMAFLTSSQNCSP*GLGAAG Trigger: TCCCGCTGCCCCCAGTCCCAAAGGACTGCAATTTTG...TGAAGAGGTGAGGAAGGCCATTGGAGTCACCTTCCCCCAAGACAAACGCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | TGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTCATACGGGCACCAGCAGGGGTaGAGGAGCTGTTTCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: CQPGAHFPTGESQDFPSYGHQQG*RSCFMT Trigger: CGTCATGAAACAGCTCCTCAACCCCTGCTGGTGCCC...GTATGAAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | ACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGGAGCTCACTTTCCGCCCCGTTGTCAAAATaGCAGTCCTTTGGGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPMAFLTSSRMSARSSLSAPLSK*QSFGTG Trigger: CCCAGTCCCAAAGGACTGCAATTTTGACAACGGGGC...GGAAAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | AGGATGTCAGCCAGGAGCTCACTTTCCGACAGGGGAATCACAGGACTTTCCTTCGGGATACATCAGCGTTaGTCTTGGGGGAAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RMSARSSLSDRGITGLSFGIHQR*SWGKVT Trigger: AGTCACCTTCCCCCAAGACAAACGCTGATGTATCCC...GAAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTCCTGGCTGACATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS-3UTR CAA 90 bp | GACTCCAATGGCCTTCCTCACCTCTTCAAGGATGTCAGCCAGGAGCTCACTTTCCTCATGCCTGCCCCGTaGTCAAAATTGCAGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DSNGLPHLFKDVSQELTFLMPAP*SKLQSF Trigger: AAAGGACTGCAATTTTGACAACGGGGCAGGCATGAG...GAAAGTGAGCTCCTGGCTGACATCCTTGAAGAGGTGAGGAAGGCCATTGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS CAA 90 bp | ACTTCCGCCGCGTTCACGCCCGTGGGCTTCTCGCACAGAACGGCCTaGCCCGCCGCCAAGCACAGCATCACCGCCGCCTTGTGCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSAAFTPVGFSHRTA*PAAKHSITAALCWG Trigger: CCCCCAGCACAAGGCGGCGGTGATGCTGTGCTTGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACGCGGCGGAAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS CCA 72 bp | CGACCATCTCGCGAACTTCCGCCGCGTTCACGCCCGTaGGCTTCTCGCACAGAACGGCCTTGCCCGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSRELPPRSRP*ASRTERPCPPP Trigger: TGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACGCGGCGGAAGTTCGCGAGATGGTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS CAA 72 bp | GCGTTCACGCCCGTGGGCTTCTCGCACAGAACGGCCTaGCCCGCCGCCAAGCACAGCATCACCGCCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AFTPVGFSHRTA*PAAKHSITAAL Trigger: CAAGGCGGCGGTGATGCTGTGCTTGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS GCA 72 bp | CGTTCACGCCCGTGGGCTTCTCGCACAGAACGGCCTTaGCCGCCGCCAAGCACAGCATCACCGCCGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRPWASRTERP*PPPSTASPPPC Trigger: ACAAGGCGGCGGTGATGCTGTGCTTGGCGGCGGGCAAGGCCGTTCTGTGCGAGAAGCCCACGGGCGTGAACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS GCA 72 bp | ACCGCCACCACCTGGTGCTCAGAGCGAGGCAGCGTCTaGAGCACGGCTGTGAAGTCGCTGGAGATGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TATTWCSERGSV*STAVKSLEMRP Trigger: CGGCCTCATCTCCAGCGACTTCACAGCCGTGCTGCAGACGCTGCCTCGCTCTGAGCACCAGGTGGTGGCGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000221403.7 ENST00000522614.5 ENST00000523250.5 |
||
| CDS CCA 72 bp | CCCCCAGCCTGGGCCCGGTCTACGGCCCGGGGAACGTaGATGAGATTCTTCCCAAATTCTGCCCGAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PPAWARSTARGT*MRFFPNSARAT Trigger: GGTGGCTCGGGCAGAATTTGGGAAGAATCTCATCCACGTTCCCCGGGCCGTAGACCGGGCCCAGGCTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000221403.7 ENST00000520557.1 ENST00000522614.5 |
||
| CDS TCA 72 bp | CAGCCTGGGCCCGGTCTACGGCCCGGGGAACGTGGATaGGATTCTTCCCAAATTCTGCCCGAGCCACCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPGPGLRPGERG*DSSQILPEPPG Trigger: TCCGGGTGGCTCGGGCAGAATTTGGGAAGAATCTCATCCACGTTCCCCGGGCCGTAGACCGGGCCCAGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000221403.7 ENST00000520557.1 ENST00000522614.5 |
||
| CDS GCA 72 bp | CCCTTGGTGCCGCTCACGGAGGCCGTGTTGGAGAGCTaGACGGTGATGCTGCAGGTGAAGCTGCCATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLVPLTEAVLES*TVMLQVKLPWT Trigger: GGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTCTCCAACACGGCCTCCGTGAGCGGCACCAAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS CCA 72 bp | GGGTGCCAATGTAGGCCACCTCCACGCTCGGGTCCTTaGCCAGCTCCTCATAGGAGCCGTAGGCCTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCQCRPPPRSGP*PAPHRSRRPWG Trigger: TCCCCAAGGCCTACGGCTCCTATGAGGAGCTGGCCAAGGACCCGAGCGTGGAGGTGGCCTACATTGGCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000522614.5 |
||
| CDS TCA 72 bp | TGCCATGGACCTCCCCTGGGTACTGCAGGAGCACCGTaGCAGTGTCATCCACACCCACGCTCGGGTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHGPPLGTAGAP*QCHPHPRSGPW Trigger: CCAAGGACCCGAGCGTGGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523250.5 |
||
| CDS CCA 72 bp | AAAGAAGCGGGTCCAGATGGCCCACGCTCGGGTCCTTaGCCAGCTCCTCATAGGAGCCGTAGGCCTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KEAGPDGPRSGP*PAPHRSRRPWG Trigger: TCCCCAAGGCCTACGGCTCCTATGAGGAGCTGGCCAAGGACCCGAGCGTGGGCCATCTGGACCCGCTTCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520557.1 |
||
| CDS CAA 90 bp | TTGAGGAGCTGTACCATGCCCTTGGTGCCGCTCACGGAGGCCGTGTaGGAGAGCTGCACGGTGATGCTGCAGGTGAAGCTGCCATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LRSCTMPLVPLTEAV*ESCTVMLQVKLPWT Trigger: GGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTCTCCAACACGGCCTCCGTGAGCGGCACCAAGGGCATGGTACAGCTCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS GCA 72 bp | CTGCAGGTGAAGCTGCCATGGACCTCCCCTGGGTACTaGAGGAGCACCGTGACAGTGTCATCCACACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LQVKLPWTSPGY*RSTVTVSSTPT Trigger: CGTGGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523250.5 |
||
| CDS CCA 72 bp | GAGAGCTGCACGGTGATGCTGCAGGTGAAGCTGCCATaGACCTCCCCTGGGTACTGCAGGAGCACCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: ESCTVMLQVKLP*TSPGYCRSTVT Trigger: TGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACCGTGCAGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS CAA 72 bp | TGTACCATGCCCTTGGTGCCGCTCACGGAGGCCGTGTaGGAGAGCTGCACGGTGATGCTGCAGGTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTMPLVPLTEAV*ESCTVMLQVKL Trigger: CAGCTTCACCTGCAGCATCACCGTGCAGCTCTCCAACACGGCCTCCGTGAGCGGCACCAAGGGCATGGTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS CCA 72 bp | GGTGATGCTGCAGGTGAAGCTGCCATGGACCTCCCCTaGGTACTGCAGGAGCACCGTGACAGTGTCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GDAAGEAAMDLP*VLQEHRDSVIH Trigger: GTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAGCATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221403.7 ENST00000523250.5 |
||
| CDS GCA 72 bp | CTGCAGGTGAAGCTGCCATGGACCTCCCCTGGGTACTaGAGGAGCACCGTGACAGTGTCATCCACACCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQVKLPWTSPGY*RSTVTVSSTPV Trigger: AACAGGTGTGGATGACACTGTCACGGTGCTCCTGCAGTACCCAGGGGAGGTCCATGGCAGCTTCACCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221403.7 |
||
| CDS CCA 72 bp | GGTCCTTGGCCAGCTCCTCATAGGAGCCGTAGGCCTTaGGGATGTCGTGTTTCTGTGCAAACTCCTTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPWPAPHRSRRP*GCRVSVQTPSH Trigger: GTGCGAAGGAGTTTGCACAGAAACACGACATCCCCAAGGCCTACGGCTCCTATGAGGAGCTGGCCAAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000221403.7 ENST00000520557.1 ENST00000522614.5 ENST00000523250.5 |
||