Pregenerated sensors for DENND6A (Homo sapiens)
Ensembl gene IDs: ENSG00000174839Ensembl transcript IDs: ENST00000311128.10, ENST00000471531.1, ENST00000477344.1, ENST00000487662.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCCTGTAACTAGCATTCATGGCAATTTTCCACTCCGCTGCCACTaGGAGATCTCCTTTGTGCGTCTGGTTGAAATGTCAGTATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: YPVTSIHGNFPLRCH*EISFVRLVEMSVCF Trigger: GAAGCATACTGACATTTCAACCAGACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGCTAGTTACAGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR TCA 90 bp | TTACGTATCATAATGAAGCTAAGGAAAAGCTTCAAGACTAGCAGCTaGACTGTGAAACATGTAGGACAACAGAAGGCACTACATAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LRIIMKLRKSFKTSS*TVKHVGQQKALHKH Trigger: ATGCTTATGTAGTGCCTTCTGTTGTCCTACATGTTTCACAGTTCAGCTGCTAGTCTTGAAGCTTTTCCTTAGCTTCATTATGATACGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR GCA 90 bp | TCACAAAATAACTCATATGATCCAAGGCAAACGATTTCTTTCAAATaGCATATTCTCTCTATGACTTTGAGGTATGCTTCAAGAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: SQNNSYDPRQTISFK*HILSMTLRYASRDC Trigger: ACAGTCTCTTGAAGCATACCTCAAAGTCATAGAGAGAATATGGCATTTGAAAGAAATCGTTTGCCTTGGATCATATGAGTTATTTTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCCACTCCGCTGCCACTaGGAGATCTCCTTTGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLPLRCH*EISFVR Trigger: ACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR TCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCTGTCAGTATGCTTCATaGTGCATAATCCTTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: AFMAIFHSAATERSPLCVCQYAS*CIILFG Trigger: GCCAAAAAGGATTATGCATCATGAAGCATACTGACA...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCCTCCCAGGTTCAAGTaGTTCTCACATCTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLPPRFK*FSHLSL Trigger: GAGGCTGAGATGTGAGAATCACTTGAACCTGGGAGG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGCAGTCAGCCGAGATTaGGCCATTGCACTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASEAVSRD*AIALQP Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGGCTGACTGC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGGCAGGACAATCACTTaGACCCGGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASEGRTIT*TREVEV Trigger: AACCTCCACCTCCCGGGTGCAAGTGATTGTCCTGCC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAAGCTACTCAGGAGGCTaGGGCAGGACAATCACTTGC | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASESYSGG*GRTITC Trigger: GCAAGTGATTGTCCTGCCTCAGCCTCCTGAGTAGCT...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATTAGTTAGTGGCTTCTaGCCAGGTGCGGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASELVSGF*PGAVAH Trigger: GTGAGCCACCGCACCTGGCCAGAAGCCACTAACTAA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCATGCATAATCCTTTTTaGCTGGAAAATCTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: AFMAIFHSAATERSPLCVMHNPF*LENLGK Trigger: TTTGCCAAGATTTTCCAGCCAAAAAGGATTATGCAT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR CAA 90 bp | TTGAGGTATGCTTCAAGAGACTGTATCCATAAGAACAGGGCACATTaGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LRYASRDCIHKNRAH*GIRPQLQTQGVFLG Trigger: CCCAAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTTCTTATGGATACAGTCTCTTGAAGCATACCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTGAGAGATCTCCTTTGTaGGTCTGGTTGAAATGTCAG | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLERSPL*VWLKCQ Trigger: CTGACATTTCAACCAGACGCACAAAGGAGATCTCTC...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTTTCAAGACTAGCAGCTaGACTGTGAAACATGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLFKTSS*TVKHVG Trigger: TCCTACATGTTTCACAGTTCAGCTGCTAGTCTTGAA...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATCTCCTTTGTGCGTCTaGTTGAAATGTCAGTATGCT | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASESPLCV*LKCQYA Trigger: AGCATACTGACATTTCAACCAGACGCACAAAGGAGA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTGTTTCAGTATTAAAGTaGAACCACCACAGATATCCA | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLVSVLK*NHHRYP Trigger: TGGATATCTGTGGTGGTTCCACTTTAATACTGAAAC...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTGTTGAAATGTCAGTATaGTTCATGATGCATAATCCT | + |
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Preference number: 2 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLVEMSV*FMMHNP Trigger: AGGATTATGCATCATGAAGCATACTGACATTTCAAC...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAACTGCAATGCCAGCACTaGAGTATGAAATCACTAATA | + |
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Preference number: 2 (lower is better) Translates to: VRNALKSYIDREQKIASELQCQH*SMKSLI Trigger: TATTAGTGATTTCATACTGCAGTGCTGGCATTGCAG...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTAGTGACCTGTCCACCTaGGCCTCCCAAAGTGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLSDLST*ASQSAR Trigger: CCTAGCACTTTGGGAGGCCAAGGTGGACAGGTCACT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCCTTTGTGCGTCTGGTaGAAATGTCAGTATGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLPLCVW*KCQYAS Trigger: TGAAGCATACTGACATTTCAACCAGACGCACAAAGG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR TCA 72 bp | ATAATGAAGCTAAGGAAAAGCTTCAAGACTAGCAGCTaGACTGTGAAACATGTAGGACAACAGAAGGCACTA | + |
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Preference number: 3 (lower is better) Translates to: IMKLRKSFKTSS*TVKHVGQQKAL Trigger: TAGTGCCTTCTGTTGTCCTACATGTTTCACAGTTCAGCTGCTAGTCTTGAAGCTTTTCCTTAGCTTCATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR GCA 72 bp | AACTCATATGATCCAAGGCAAACGATTTCTTTCAAATaGCATATTCTCTCTATGACTTTGAGGTATGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: NSYDPRQTISFK*HILSMTLRYAS Trigger: TGAAGCATACCTCAAAGTCATAGAGAGAATATGGCATTTGAAAGAAATCGTTTGCCTTGGATCATATGAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| 3UTR GCA 72 bp | AATGAAGACACCATTATCATGCTAATTGGCATCTTTTaGTACTGTTTAGCTGTGCAAAATAGACTTGAAATG | + |
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Preference number: 3 (lower is better) Translates to: NEDTIIMLIGIF*YCLAVQNRLEM Trigger: CATTTCAAGTCTATTTTGCACAGCTAAACAGTAGCAAAAGATGCCAATTAGCATGATAATGGTGTCTTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCCTCTTCATCGTCCTCTaGCGCGCCTCCCGCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVLFIVL*RASRRH Trigger: GTGGCGGCGGGAGGCGCGCCAGAGGACGATGAAGAG...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTGCGGCCCTCGGCCCCTaGCACCGCTTCGTCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLAALGP*HRFVQR Trigger: CCGTTGGACGAAGCGGTGGCAGGGGCCGAGGGCCGC...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCATTACCTCCACGGCCTaGCCCAGCTCCAGGTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVITSTA*PSSRSK Trigger: CTTCGACCTGGAGCTGGGCCAGGCCGTGGAGGTAAT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCCCACTCCGCTGCCACTaGGAGATCTCCTTTGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVPLRCH*EISFVR Trigger: ACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGG...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGCAGTCAGCCGAGATTaGGCCATTGCACTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVAVSRD*AIALQP Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGGCTGACTGC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCTGTTTTCCCTGGCACTaGGGCAGGCCATCGATCAAC | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVCFPWH*GRPSIN Trigger: GTTGATCGATGGCCTGCCCCAGTGCCAGGGAAAACA...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCCCTCCCAGGTTCAAGTaGTTCTCACATCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVPPRFK*FSHLSL Trigger: GAGGCTGAGATGTGAGAATCACTTGAACCTGGGAGG...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGGTTTCACAGGTAAGTaGTCTCGATCAGCCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVGFTGK*SRSACN Trigger: GTTGCAGGCTGATCGAGAGCACTTACCTGTGAAACC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCACTGAGGGCGGAGCTTaGGTACGGGTAGTATATTCT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVTEGGA*VRVVYS Trigger: AGAATATACTACCCGTACCCAAGCTCCGCCCTCAGT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCATGTCATGCCCGTTTTaGGCAGTATGCCTTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVMSCPF*AVCLAS Trigger: ACTTGCAAGGCATACTGCTCAAAACGGGCATGACAT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCAGTGCCTCCAATTTTTaGGTCATTTCCTTCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVSASNF*VISFLR Trigger: CCGGAGGAAGGAAATGACCCAAAAATTGGAGGCACT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCATACCCTTAAAGCAGTaGTTCCTCCTGATGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVIPLKQ*FLLMLV Trigger: TACCAGCATCAGGAGGAATCACTGCTTTAAGGGTAT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGGGGAAATACTTTTCTaGAAAGGCATCAAGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVGEILF*KGIKLA Trigger: GGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCCCC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGAGAGATCTCCTTTGTaGGTCTGGTTGAAATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVERSPL*VWLKCQ Trigger: CTGACATTTCAACCAGACGCACAAAGGAGATCTCTC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTAGCTACTCAGGAGGCTaGGGCAGGACAATCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLSYSGG*GRTITC Trigger: GCAAGTGATTGTCCTGCCTCAGCCTCCTGAGTAGCT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCTATTCGAATAATGTGTaGCCAGTGCTGGAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVYSNNV*PVLECL Trigger: AAGACACTCCAGCACTGGCCACACATTATTCGAATA...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTTTAGTTAGTGGCTTCTaGCCAGGTGCGGTGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLLVSGF*PGAVAH Trigger: GTGAGCCACCGCACCTGGCCAGAAGCCACTAACTAA...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTTTGAGCAGTATGCCTTaGAAGTCCTCTGGCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLLSSMP*KSSGNA Trigger: AGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAA...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGGTAATGACCATAAATaGCTTCACAAAACCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVGNDHK*LHKTSF Trigger: AAAAGAGGTTTTGTGAAGGCATTTATGGTCATTACC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCTATAAACTCCAGGTTTaGAATCCAGAGTCTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: AFMAIFHSAATERSPLCVYKLQV*NPESLD Trigger: ATCTAAAGACTCTGGATTCCAAACCTGGAGTTTATA...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCTGGGCAGAAACACCTaGAAATATCCACCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLLGRNT*KYPPHE Trigger: TTCATGAGGTGGATATTTTCAGGTGTTTCTGCCCAG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTAGAAACTGTCTTAATTaGGGTGGACTCTTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLRNCLN*GGLFHG Trigger: CCCATGGAAGAGTCCACCTCAATTAAGACAGTTTCT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTATTCTAGAGGTTAGCTaGGGTCCTGTTTTCTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLILEVS*GPVFSS Trigger: ACTTGAGAAAACAGGACCTCAGCTAACCTCTAGAAT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTATAATGTGTGGCCAGTaGTGGAGTGTCTTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLIMCGQ*WSVLAK Trigger: TTTTGCTAAGACACTCCAGCACTGGCCACACATTAT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTAGGTGGACTCTTCCATaGGGAAATACTTTTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLRWTLP*GNTFLQ Trigger: TTGCAGAAAAGTATTTCCCCATGGAAGAGTCCACCT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCAAAGAGCTTCTAGATaGAGTGCCTCCAATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLQRASR*SASNFW Trigger: CCAAAAATTGGAGGCACTCCATCTAGAAGCTCTTTG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGCAAGGAGTCTTTCTTaGGTCAGGAATGCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEARSLS*VRNALK Trigger: CTTAAGGGCATTCCTGACCCAAGAAAGACTCCTTGC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATCATTACCACCCCCATaGTTGGCAGGTGTAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASESLPPP*LAGVMF Trigger: AAACATTACACCTGCCAATCATGGGGGTGGTAATGA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGTTAACTGCACTATTTaGGTTGTCCCAGGCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEVNCTI*VVPGLS Trigger: TGACAAGCCTGGGACAACTCAAATAGTGCAGTTAAC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAACGAAGAATAACACTTTaGGCCTCAGAAGGACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASERRITL*ASEGRF Trigger: GAAACGTCCTTCTGAGGCTCAAAGTGTTATTCTTCG...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATGCTCTCGATCAGCCTaGAACAGCTTATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASECSRSA*NSLFFS Trigger: GCTGAAAAATAAGCTGTTGCAGGCTGATCGAGAGCA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCTGCAATGCCAGCACTaGAGTATGAAATCACTAATA | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLLQCQH*SMKSLI Trigger: TATTAGTGATTTCATACTGCAGTGCTGGCATTGCAG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTTATAAGGTAGTTTGCTaGTCAAAACCAAGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLYKVVC*SKPRTS Trigger: AGAAGTCCTTGGTTTTGATCAGCAAACTACCTTATA...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATTCAAGACTAGCAGCTaGACTGTGAAACATGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEFKTSS*TVKHVG Trigger: TCCTACATGTTTCACAGTTCAGCTGCTAGTCTTGAA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCTTTTCAAAATACTCTaGTGCTATCTGTTTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLLFKIL*CYLFEH Trigger: GTGCTCAAACAGATAGCACCAGAGTATTTTGAAAAG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGCTTGTCATGACATGTaGGAATCCGTACCTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEACHDM*ESVPSL Trigger: TAATGAAGGTACGGATTCCCACATGTCATGACAAGC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTACTATGAAGGAAAACTaGGCAGAAACACCTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLTMKEN*AETPEN Trigger: ATTTTCAGGTGTTTCTGCCCAGTTTTCCTTCATAGT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAACTTCTGTGTGTTTCTaGATCCAGAGAAGTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASETSVCF*IQRSKS Trigger: GGACTTACTTCTCTGGATCCAGAAACACACAGAAGT...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATGTCAGTATGCTTCATaGTGCATAATCCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASECQYAS*CIILFG Trigger: GCCAAAAAGGATTATGCATCATGAAGCATACTGACA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAAAGGTCGGAAATCACTaGAGTACTTTAATGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEKVGNH*STLMEK Trigger: TTTCTCCATTAAAGTACTTCAGTGATTTCCGACCTT...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATTCAAAATACTCTGGTaGTATCTGTTTGAGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEFKILW*YLFEHS Trigger: ACTGTGCTCAAACAGATAGCACCAGAGTATTTTGAA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAACTAATTGGCATCTTTTaGTACTGTTTAGCTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASELIGIF*YCLAVQ Trigger: TTGCACAGCTAAACAGTAGCAAAAGATGCCAATTAG...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGTTGAAATGTCAGTATaGTTCATGATGCATAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEVEMSV*FMMHNP Trigger: AGGATTATGCATCATGAAGCATACTGACATTTCAAC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CCA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAATGCATAATCCTTTTTaGCTGGAAAATCTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRNALKSYIDREQKIASEMHNPF*LENLGK Trigger: TTTGCCAAGATTTTCCAGCCAAAAAGGATTATGCAT...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS GCA 90 bp | GCCTCCCGCCGCCACAAGGGCCGGCGCCTCGCGGCCCTCGGCCCCTaGCACCGCTTCGTCCAACGGCCTTCGAGAGCCGGGCCCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRRHKGRRLAALGP*HRFVQRPSRAGPQA Trigger: GGCTTGGGGCCCGGCTCTCGAAGGCCGTTGGACGAAGCGGTGGCAGGGGCCGAGGGCCGCGAGGCGCCGGCCCTTGTGGCGGCGGGAGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS CCA 90 bp | GCGCAGCAGGCCCCGGCCACGGCCATCGTCCTCTTCATCGTCCTCTaGCGCGCCTCCCGCCGCCACAAGGGCCGGCGCCTCGCGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQQAPATAIVLFIVL*RASRRHKGRRLAAL Trigger: GAGGGCCGCGAGGCGCCGGCCCTTGTGGCGGCGGGAGGCGCGCCAGAGGACGATGAAGAGGACGATGGCCGTGGCCGGGGCCTGCTGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGAGTGCCTCCAATTTTaGGGTCATTTCCTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AFMAIFHSAATERSPLCVECLQF*GHFLPP Trigger: CGGAGGAAGGAAATGACCCAAAAATTGGAGGCACTC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCACTGCACTATTTGAGTaGTCCCAGGCTTGTCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFMAIFHSAATERSPLCVTALFE*SQACHD Trigger: GTCATGACAAGCCTGGGACAACTCAAATAGTGCAGT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCTCGAAGAATAACACTTaGAGCCTCAGAAGGACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFMAIFHSAATERSPLCVSKNNT*SLRRTF Trigger: AAACGTCCTTCTGAGGCTCAAAGTGTTATTCTTCGA...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCGCAAAGGCATCAAGCTaGCCACATATCTTTCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: AFMAIFHSAATERSPLCVAKASS*PHIFLM Trigger: CATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGC...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GCATTCATGGCAATTTTCCACTCCGCTGCCACTGAGAGATCTCCTTTGTGCGTCAAGAACAGGGCACATTaGGGTATTAGACCACAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFMAIFHSAATERSPLCVKNRAH*GIRPQL Trigger: TAACTGTGGTCTAATACCCAAATGTGCCCTGTTCTT...GACGCACAAAGGAGATCTCTCAGTGGCAGCGGAGTGGAAAATTGCCATGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTCATGTCATGCCCGTTTaGAGCAGTATGCCTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLHVMPV*SSMPCK Trigger: CTTGCAAGGCATACTGCTCAAAACGGGCATGACATG...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS CCA 90 bp | ACACAAACACACAGTTTTCGAACCTCTTCACAAAGAGCTTCTAGATaGAGTGCCTCCAATTTTTGGGTCATTTCCTTCCTCCGGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TQTHSFRTSSQRASR*SASNFWVISFLRVL Trigger: TAAGACCCGGAGGAAGGAAATGACCCAAAAATTGGAGGCACTCCATCTAGAAGCTCTTTGTGAAGAGGTTCGAAAACTGTGTGTTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471531.1 |
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| CDS GCA 90 bp | AATCTTGGCAAATATCATGTCATGCCCGTTTTGAGCAGTATGCCTTaGAAGTCCTCTGGCAATGCTAAGATAATGGCATCTATGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLGKYHVMPVLSSMP*KSSGNAKIMASMCV Trigger: GACACACATAGATGCCATTATCTTAGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCATGACATGATATTTGCCAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAATTTGAGCAGTATGCCTaGCAAGTCCTCTGGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VRNALKSYIDREQKIASEFEQYA*QVLWQC Trigger: GCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAA...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTACCAGCCATCAAAATTaGGAGACTTTAGGAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLTSHQN*ETLGNA Trigger: GGCATTTCCTAAAGTCTCCAAATTTTGATGGCTGGT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAACCTTTGTGCGTCTGGTaGAAATGTCAGTATGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRNALKSYIDREQKIASEPLCVW*KCQYAS Trigger: TGAAGCATACTGACATTTCAACCAGACGCACAAAGG...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAACTGAGAGATCTCCTTaGTGCGTCTGGTTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VRNALKSYIDREQKIASETERSP*CVWLKC Trigger: ACATTTCAACCAGACGCACAAAGGAGATCTCTCAGT...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTATACTAGATGCCTTCTaGTCTTTGGAGAAACTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLILDAF*SLEKLV Trigger: TACCAGTTTCTCCAAAGACAAGAAGGCATCTAGTAT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | AACAGGGCACATTTGGGTATTAGACCACAGTTACAAACGCAAGGAGTCTTTCTTAGTTTTATCTCGAACTaGTCGGAAATACACATATCC | + |
|
Preference number: 5 (lower is better) Translates to: NRAHLGIRPQLQTQGVFLSFISN*SEIHIS Trigger: GGATATGTGTATTTCCGACAAGTTCGAGATAAAACT...AAGAAAGACTCCTTGCGTTTGTAACTGTGGTCTAATACCCAAATGTGCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS-3UTR CAA 90 bp | GTCAGGAATGCCCTTAAGAGTTATATCGACAGAGAACAAAAGATAGCTTCTGAAGATGCCTTCTTGTCTTaGGAGAAACTGGTAACATTA | + |
|
Preference number: 5 (lower is better) Translates to: VRNALKSYIDREQKIASEDAFLS*EKLVTL Trigger: TAATGTTACCAGTTTCTCCAAAGACAAGAAGGCATC...TTCAGAAGCTATCTTTTGTTCTCTGTCGATATAACTCTTAAGGGCATTCCTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS TCA 72 bp | AGCCCGCAGGGCCCCTCAAAGCCATCGGCCGCCCCCTaGCCGTTCGCGCCGCCTCCACAGCGGACCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPQGPSKPSAAP*PFAPPPQRTAP Trigger: CGGCGCGGTCCGCTGTGGAGGCGGCGCGAACGGTCAGGGGGCGGCCGATGGCTTTGAGGGGCCCTGCGGGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS GCA 72 bp | CGCCACAAGGGCCGGCGCCTCGCGGCCCTCGGCCCCTaGCACCGCTTCGTCCAACGGCCTTCGAGAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHKGRRLAALGP*HRFVQRPSRAG Trigger: CCCGGCTCTCGAAGGCCGTTGGACGAAGCGGTGGCAGGGGCCGAGGGCCGCGAGGCGCCGGCCCTTGTGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS CCA 72 bp | GCCCCGGCCACGGCCATCGTCCTCTTCATCGTCCTCTaGCGCGCCTCCCGCCGCCACAAGGGCCGGCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: APATAIVLFIVL*RASRRHKGRRL Trigger: GAGGCGCCGGCCCTTGTGGCGGCGGGAGGCGCGCCAGAGGACGATGAAGAGGACGATGGCCGTGGCCGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS TCA 72 bp | GACATGTGGGAATCCGTACCTTCATTACCACCCCCATaGTTGGCAGGTGTAATGTTTTCCCTGGCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DMWESVPSLPPP*LAGVMFSLALG Trigger: CCCCAGTGCCAGGGAAAACATTACACCTGCCAATCATGGGGGTGGTAATGAAGGTACGGATTCCCACATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311128.10 ENST00000487662.1 |
||
| CDS TCA 72 bp | CAGATATATTTGTGTCCACCTTCATTACCACCCCCATaGTTGGCAGGTGTAATGTTTTCCCTGGCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIYLCPPSLPPP*LAGVMFSLALG Trigger: CCCCAGTGCCAGGGAAAACATTACACCTGCCAATCATGGGGGTGGTAATGAAGGTGGACACAAATATATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477344.1 |
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| CDS CAA 72 bp | CTGGAAAATCTTGGCAAATATCATGTCATGCCCGTTTaGAGCAGTATGCCTTGCAAGTCCTCTGGCAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LENLGKYHVMPV*SSMPCKSSGNA Trigger: AGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCATGACATGATATTTGCCAAGATTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS TCA 72 bp | TGGAAAATCTTGGCAAATATCATGTCATGCCCGTTTTaGGCAGTATGCCTTGCAAGTCCTCTGGCAATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: WKILANIMSCPF*AVCLASPLAML Trigger: TAGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCATGACATGATATTTGCCAAGATTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS GCA 72 bp | CGTAACTTTTCCATAGTGTCAGGTTTCACAGGTAAGTaGTCTCGATCAGCCTGCAACAGCTTATTTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNFSIVSGFTGK*SRSACNSLFFS Trigger: GCTGAAAAATAAGCTGTTGCAGGCTGATCGAGAGCACTTACCTGTGAAACCTGACACTATGGAAAAGTTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS CCA 72 bp | CAGAGAAGTAAGTCCTCTTCACAAAGAGCTTCTAGATaGAGTGCCTCCAATTTTTGGGTCATTTCCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QRSKSSSQRASR*SASNFWVISFL Trigger: GAGGAAGGAAATGACCCAAAAATTGGAGGCACTCCATCTAGAAGCTCTTTGTGAAGAGGACTTACTTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311128.10 |
||
| CDS CCA 72 bp | CACAGTTTTCGAACCTCTTCACAAAGAGCTTCTAGATaGAGTGCCTCCAATTTTTGGGTCATTTCCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSFRTSSQRASR*SASNFWVISFL Trigger: GAGGAAGGAAATGACCCAAAAATTGGAGGCACTCCATCTAGAAGCTCTTTGTGAAGAGGTTCGAAAACTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471531.1 |
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| CDS CAA 90 bp | CAGATATATTTGTGTCCACCTGCTGAGTTAACTGCACTATTTGAGTaGTCCCAGGCTTGTCATGACATGTGGGAATCCGTACCTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: QIYLCPPAELTALFE*SQACHDMWESVPSL Trigger: TAATGAAGGTACGGATTCCCACATGTCATGACAAGCCTGGGACAACTCAAATAGTGCAGTTAACTCAGCAGGTGGACACAAATATATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000311128.10 ENST00000487662.1 |
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| CDS CAA 90 bp | CCTTTTTGGCTGGAAAATCTTGGCAAATATCATGTCATGCCCGTTTaGAGCAGTATGCCTTGCAAGTCCTCTGGCAATGCTAAGATAATG | + |
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Preference number: 6 (lower is better) Translates to: PFWLENLGKYHVMPV*SSMPCKSSGNAKIM Trigger: CATTATCTTAGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCATGACATGATATTTGCCAAGATTTTCCAGCCAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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| CDS GCA 72 bp | AAATATCATGTCATGCCCGTTTTGAGCAGTATGCCTTaGAAGTCCTCTGGCAATGCTAAGATAATGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: KYHVMPVLSSMP*KSSGNAKIMAS Trigger: AGATGCCATTATCTTAGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCATGACATGATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311128.10 |
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