RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND2D (Homo sapiens)

Ensembl gene IDs: ENSG00000162777

Ensembl transcript IDs: ENST00000357640.9, ENST00000369752.5, ENST00000463713.5, ENST00000468692.1, ENST00000473682.5, ENST00000473822.5, ENST00000477586.5, ENST00000488786.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCTAGAAGCTGTGAAGAATAGTAGTGTAGCTAAGCACGGTGTGTaGACAGTGGGACATCTGCCACCTGCAGTAGGTCTCTGCACTCCC +
Preference number: 1 (lower is better)
Translates to: FLEAVKNSSVAKHGV*TVGHLPPAVGLCTP
Trigger: GGGAGTGCAGAGACCTACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACTATTCTTCACAGCTTCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR GCA 90 bp CACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTAGGTCTCTaGACTCCCAAAAGCAAATTACATTGGCTTGAACTTCAGTATGCC +
Preference number: 1 (lower is better)
Translates to: HGVWTVGHLPPAVGL*TPKSKLHWLELQYA
Trigger: GGCATACTGAAGTTCAAGCCAATGTAATTTGCTTTTGGGAGTGCAGAGACCTACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR TCA 90 bp CATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTaGAGATGTTATAATGATGGGAGAGGGCAGTTGCAGCAGCTTCTA +
Preference number: 1 (lower is better)
Translates to: HVERLSLSTTKCVLC*RCYNDGRGQLQQLL
Trigger: TAGAAGCTGCTGCAACTGCCCTCTCCCATCATTATAACATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR TCA 90 bp GTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGACACCAGTTTaGAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATT +
Preference number: 1 (lower is better)
Translates to: VLRNQYQGSKSQTPV*SNTWIPRLRVRIWI
Trigger: AATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGATTTCTCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR TCA 90 bp TCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTGAGCCCAGTTCTGTaGGCATGGTGTCAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SSLLSSLHVHRLHVERLSLSPVL*AWCQSP
Trigger: AGGGCTCTGACACCATGCTCACAGAACTGGGCTCAG...GCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CCA 90 bp CAGACCTACGTATGGAAGCCATGTAGTGTTCTTCACAGGCTGCTGTTGACTGAACTGATCCTGCCACACTaGCAGGGGCTGAAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: QTYVWKPCSVLHRLLLTELILPH*QGLKSR
Trigger: TCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATCAG...TTCAGTCAACAGCAGCCTGTGAAGAACACTACATGGCTTCCATACGTAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CCA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTCTGATCCTGCCACACTaGCAGGGGCTGAAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCLILPH*QGLKSR
Trigger: TCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATCAG...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR TCA 90 bp GCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGGTAAAGCTGAGCCCAGTTCTGTaGGCATGGTGTCAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: AAQNKDQLEVGCPRLKVKLSPVL*AWCQSP
Trigger: AGGGCTCTGACACCATGCTCACAGAACTGGGCTCAG...CTTTACCTTCAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CCA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGCTCCTCCCAGGATTCTaGAAAGCACACCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGLLPGF*KAHLTP
Trigger: TGGAGTCAGGTGTGCTTTCCAGAATCCTGGGAGGAG...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CCA 90 bp CACAAGATTCTCAGGATTCCAGTTCCTGTTCTGAAACCTTTGGAGGTACAACTAACGGTGTGTGGACAGTaGGACATCTGCCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: HKILRIPVPVLKPLEVQLTVCGQ*DICHLQ
Trigger: CTGCAGGTGGCAGATGTCCCACTGTCCACACACCGT...TAGTTGTACCTCCAAAGGTTTCAGAACAGGAACTGGAATCCTGAGAATCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR GCA 90 bp TATTTAGTGTGTGCTTCCTTCAGCCCTAAATACAGCATTAGCATCAAATCAAGGGGGACATCTGCCACCTaGAGTAGGTCTCTGCACTCC +
Preference number: 2 (lower is better)
Translates to: YLVCASFSPKYSISIKSRGTSAT*SRSLHS
Trigger: GGAGTGCAGAGACCTACTGCAGGTGGCAGATGTCCC...CCTTGATTTGATGCTAATGCTGTATTTAGGGCTGAAGGAAGCACACACTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR TCA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGCAAATTACTCTAGACTaGAGCTGCTTCCCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGQITLD*SCFPSV
Trigger: CACTGAAGGGAAGCAGCTTCAGTCTAGAGTAATTTG...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR CAA 90 bp GGGAAGAACGTCAGTGCAGCGATCCCTTCACCTTTAGTTAAAGAATaGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGT +
Preference number: 2 (lower is better)
Translates to: GKNVSAAIPSPLVKE*DCAAQNKDQLEVGC
Trigger: ACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAATTCTTTAACTAAAGGTGAAGGGATCGCTGCACTGACGTTCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR CAA 90 bp AGTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGACACCAGTTaGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGAT +
Preference number: 2 (lower is better)
Translates to: SPEKSIPGIQISDTS*KQYLDTKTQSEDMD
Trigger: ATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGATTTCTCAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR GCA 90 bp CTTTTACCAGTATCTCTTACCCTTCCGGTTAGAAGAAGTAGAGCTGCTGCCCCCGATTGTCATATTCATTaGCTTATTTTCCACGAGGAA +
Preference number: 2 (lower is better)
Translates to: LLPVSLTLPVRRSRAAAPDCHIH*LIFHEE
Trigger: TTCCTCGTGGAAAATAAGGCAATGAATATGACAATC...GGGGGCAGCAGCTCTACTTCTTCTAACCGGAAGGGTAAGAGATACTGGTAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CCA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAAGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKAEVQK*CVALVI
Trigger: AATGACTAGAGCTACACACCATTTCTGGACTTCAGC...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CCA 90 bp ATCAATACCAGGGATCCAAATCTCAGACACCAGTTTGAAGCAATACCTGGATACGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: INTRDPNLRHQFEAIPGYAEVQK*CVALVI
Trigger: AATGACTAGAGCTACACACCATTTCTGGACTTCAGC...GTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGCCAAACATATCCCCATaGCCAGGTCTTCCACTTGTA +
Preference number: 2 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKPNISP*PGLPLV
Trigger: TACAAGTGGAAGACCTGGCCATGGGGATATGTTTGG...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR CAA 90 bp TATTTTCACAAGATTCTCAGGATTCCAGTTCCTGTTCTGAAACCTTaGGAGGTACAACTATATTTAGGCACCACTGCCATAAACTACCAA +
Preference number: 2 (lower is better)
Translates to: YFHKILRIPVPVLKP*EVQLYLGTTAINYQ
Trigger: TTGGTAGTTTATGGCAGTGGTGCCTAAATATAGTTGTACCTCCAAAGGTTTCAGAACAGGAACTGGAATCCTGAGAATCTTGTGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR CCA 72 bp GCTGTGAAGAATAGTAGTGTAGCTAAGCACGGTGTGTaGACAGTGGGACATCTGCCACCTGCAGTAGGTCTC +
Preference number: 3 (lower is better)
Translates to: AVKNSSVAKHGV*TVGHLPPAVGL
Trigger: GAGACCTACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACTATTCTTCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CAA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTGGGAGCTGACAGTTTaGCTGATCCTGCCACACTGG +
Preference number: 3 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVWELTV*LILPHW
Trigger: CCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCA...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CAA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTGGGAGCTGACAGTTTaGCTGATCCTGCCACACTGG +
Preference number: 3 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCWELTV*LILPHW
Trigger: CCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCA...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CAA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGGATGGGAGAGGGCAGTaGCAGCAGCTTCTAACCAAG +
Preference number: 3 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKDGRGQ*QQLLTK
Trigger: CTTGGTTAGAAGCTGCTGCAACTGCCCTCTCCCATC...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR GCA 72 bp TGGAAAGCACACCTGACTCCAAACCAAGGACTTAGATaGCCTGTGTCCAGTGCTGCTGCTGCTTTTACCAGT +
Preference number: 3 (lower is better)
Translates to: WKAHLTPNQGLR*PVSSAAAAFTS
Trigger: ACTGGTAAAAGCAGCAGCAGCACTGGACACAGGGCATCTAAGTCCTTGGTTTGGAGTCAGGTGTGCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR CCA 72 bp GATCCTGCCACACTGGCAGGGGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATTCTTATTCACCACAGC +
Preference number: 3 (lower is better)
Translates to: DPATLAGAEVQK*CVALVILIHHS
Trigger: GCTGTGGTGAATAAGAATGACTAGAGCTACACACCATTTCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR-3UTR CAA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGGATGGGAGAGGGCAGTaGCAGCAGCTTCTAACCAAG +
Preference number: 3 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGDGRGQ*QQLLTK
Trigger: CTTGGTTAGAAGCTGCTGCAACTGCCCTCTCCCATC...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR GCA 72 bp TGGACAGTGGGACATCTGCCACCTGCAGTAGGTCTCTaGACTCCCAAAAGCAAATTACATTGGCTTGAACTT +
Preference number: 3 (lower is better)
Translates to: WTVGHLPPAVGL*TPKSKLHWLEL
Trigger: AAGTTCAAGCCAATGTAATTTGCTTTTGGGAGTGCAGAGACCTACTGCAGGTGGCAGATGTCCCACTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
3UTR-3UTR CAA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGGTGAGGATATGGATTTaGGGAGCTGACAGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVVRIWI*GADSFA
Trigger: AGCAAAACTGTCAGCTCCCAAAATCCATATCCTCAC...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR CCA 72 bp AGCAATACCTGGATACCAAGACTCAGAGTGAGGATATaGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCC +
Preference number: 3 (lower is better)
Translates to: SNTWIPRLRVRI*ILGADSFADPA
Trigger: GGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR TCA 72 bp AATCAATACCAGGGATCCAAATCTCAGACACCAGTTTaGAGCAATACCTGGATACCAAGACTCAGAGTGAGG +
Preference number: 3 (lower is better)
Translates to: NQYQGSKSQTPV*SNTWIPRLRVR
Trigger: CCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTGAAGATGCCATGGCCCCTGGAGTaGCCGGCTCCCGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCREAEPFDHKVCSVLKMPWPLE*PAPAPS
Trigger: GCTGGGAGCGGGAGCCGGGCACTCCAGGGGCCATGG...CATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS-3UTR CCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGGCTTCAGTCTCAGGCTaGCTCGAAGGCGGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVASVSG*LEGGGR
Trigger: TCGGCCGCCGCCTTCGAGCCAGCCTGAGACTGAAGC...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS-3UTR TCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGGTCCTGCTCGGAGTTaGAGCAGTCGGCGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGGPARS*SSRRWK
Trigger: CTTCCAACGCCGACTGCTTCAACTCCGAGCAGGACC...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTCCTCCTCCTCCTGCTaGCCCCGAAGCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVSSSSC*PRSRFS
Trigger: GGAGAACCTGCTTCGGGGTCAGCAGGAGGAGGAGGA...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CTTTTACCAGTATCTCTTACCCTTCCGGTTAGAAGAAGTAGAGCTGCTGCCCCCAGGAGCAGGGAAGGCTaGCTCTCGGAGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLPVSLTLPVRRSRAAAPRSREG*LSEALH
Trigger: ATGCAGGGCCTCCGAGAGGCAGCCTTCCCTGCTCCT...GGGGGCAGCAGCTCTACTTCTTCTAACCGGAAGGGTAAGAGATACTGGTAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGCTGATCCTGCCACACTaGCAGGGGCTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GYGFWELTVLLILPHWQGLILPH*QGLKSR
Trigger: TCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATCAG...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCGGCCGAGCCCATCCATaGCCCCTGGAGTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSGRAHP*PLECPA
Trigger: AGCCGGGCACTCCAGGGGCCATGGATGGGCTCGGCC...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS-3UTR TCA 90 bp AGTAGTGTAGCTAAGCACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTAGCCGTGTCAGTGAAATaGACTCAGTGCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SSVAKHGVWTVGHLPPAVAVSVK*TQCLSR
Trigger: CCGACTCAGGCACTGAGTTCATTTCACTGACACGGC...TACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGTCCACATGTTCTAGGTaGGAGTCCAGGGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGSTCSR*ESRGRV
Trigger: GACACGGCCCCTGGACTCCCACCTAGAACATGTGGA...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGCTGATCCTGCCACACTaGCAGGGGCTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGLILPH*QGLKSR
Trigger: TCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATCAG...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTGAAGATGTGGGGTGGTCCCCCATaGCCGCGCTTCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SCREAEPFDHKVCSVLKMWGGPP*PRFSLR
Trigger: CCTGAGACTGAAGCGCGGCCATGGGGGACCACCCCA...CATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS-3UTR TCA 90 bp CAGACCTACGTATGGAAGCCATGTAGTGTTCTTCACAGGCTGCTGTTGACTGAACCAGCCACAACTCTGTaGAGCCAAGCCACGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QTYVWKPCSVLHRLLLTEPATTL*SQATRC
Trigger: ACAGCGCGTGGCTTGGCTTCACAGAGTTGTGGCTGG...TTCAGTCAACAGCAGCCTGTGAAGAACACTACATGGCTTCCATACGTAGGTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTTCCTCCTCCTCCTGCTaGCCCCGAAGCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCSSSSC*PRSRFS
Trigger: GGAGAACCTGCTTCGGGGTCAGCAGGAGGAGGAGGA...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AGTAGTGTAGCTAAGCACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTACTTCCGCCAGGAAGATaGTTTTTCTCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SSVAKHGVWTVGHLPPAVLPPGR*FFSPAR
Trigger: CCGTGCTGGAGAGAAAAATCATCTTCCTGGCGGAAG...TACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCAGGTGTGCGCCCAGCTaGAGGGGTAGAGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSRCAPS*RGRAVR
Trigger: CCGCACTGCTCTACCCCTTCAGCTGGGCGCACACCT...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTAGGTGTGCGCCCAGCTaGAGGGGTAGAGCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFRCAPS*RGRAVR
Trigger: CCGCACTGCTCTACCCCTTCAGCTGGGCGCACACCT...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGTTTGTACTCCAACCATaGAGGGGGTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGFVLQP*RGWGSR
Trigger: TCTGCTGCCCCACCCCCTTCATGGTTGGAGTACAAA...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp AGTAGTGTAGCTAAGCACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTACAGGCAAGAGGCGCCTaGAGTATCCAATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSVAKHGVWTVGHLPPAVQARGA*SIQSFC
Trigger: GCAGAAAGATTGGATACTGCAGGCGCCTCTTGCCTG...TACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGGTGGCCTTGCCCATTTaGCTCCCGCTTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: GYGFWELTVLLILPHWQGVALPI*LPLDIG
Trigger: TCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCAC...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGTCTTGGAAGTGGCCTTaGCCATTTGCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGSWKWP*PFASRL
Trigger: CAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGA...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGATCGGCGGTTGGTCTTaGAGGTCAGAGCCTTACAGA +
Preference number: 4 (lower is better)
Translates to: GYGFWELTVLLILPHWQGIGGWS*RSEPYR
Trigger: TCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGAT...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGGCGTTGGAAGAGCCTaGACACCCGGCCTACCACTT +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCGVGRA*TPGLPL
Trigger: AAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCC...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAAAGGAGCAGGGAAGGCTaGCTCTCGGAGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKRSREG*LSEALH
Trigger: ATGCAGGGCCTCCGAGAGGCAGCCTTCCCTGCTCCT...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTCTTGGAAGTGGCCTTaGCCATTTGCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVSWKWP*PFASRL
Trigger: CAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGA...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp CAGACCTACGTATGGAAGCCATGTAGTGTTCTTCACAGGCTGCTGTTGACTGAATCCCCTGAATTGTCCTaGGGTGGTCCTGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: QTYVWKPCSVLHRLLLTESPELS*GGPARS
Trigger: ACTCCGAGCAGGACCACCCCAGGACAATTCAGGGGA...TTCAGTCAACAGCAGCCTGTGAAGAACACTACATGGCTTCCATACGTAGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGGGGCAGCAGACGGTaGCCAGAAGGCTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSWGSRR*PEGSQG
Trigger: TCCCTGAGAGCCTTCTGGCCACCGTCTGCTGCCCCA...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGTGGGGCAGCAGACGGTaGCCAGAAGGCTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLWGSRR*PEGSQG
Trigger: TCCCTGAGAGCCTTCTGGCCACCGTCTGCTGCCCCA...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAATCCCCTGAATTGTCCTaGGGTGGTCCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKSPELS*GGPPWP
Trigger: CGGCCATGGGGGACCACCCCAGGACAATTCAGGGGA...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS-3UTR TCA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGCCCTGGGATACTCGGTaGGTGATGCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGPWDTR*VMPTHS
Trigger: GGAATGAGTGGGCATCACTCACCGAGTATCCCAGGG...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGCTTCCGCCAGGAAGATaGTTTTTCTCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVLPPGR*FFSPAR
Trigger: CCGTGCTGGAGAGAAAAATCATCTTCCTGGCGGAAG...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCACTGAGACAAGGTGCTaGGACCTTCCGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLLSSLHVHRLHVERLSTETRC*DLPPGR
Trigger: TCTTCCTGGCGGAAGGTCTCAGCACCTTGTCTCAGT...GCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGAGCCCTCCAAAGTCCTaGGAAATCAATACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GYGFWELTVLLILPHWQGSPPKS*EINTRD
Trigger: ATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCT...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AGTAGTGTAGCTAAGCACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTATCTGGAAAGCACACCTaGCTCCAAACCAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: SSVAKHGVWTVGHLPPAVSGKHT*LQTKDL
Trigger: TAAGTCCTTGGTTTGGAGTCAGGTGTGCTTTCCAGA...TACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp CTTTTACCAGTATCTCTTACCCTTCCGGTTAGAAGAAGTAGAGCTGCTGCCCCCATCGGCGGTTGGTCTTaGAGGTCAGAGCCTTACAGA +
Preference number: 4 (lower is better)
Translates to: LLPVSLTLPVRRSRAAAPIGGWS*RSEPYR
Trigger: TCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGAT...GGGGGCAGCAGCTCTACTTCTTCTAACCGGAAGGGTAAGAGATACTGGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGCCCTGGGATACTCGGTaGGTGATGCCCACTCATTCC +
Preference number: 4 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLPWDTR*VMPTHS
Trigger: GGAATGAGTGGGCATCACTCACCGAGTATCCCAGGG...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGAATGAACTCAGTGCCTaGGTCGGGGATGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VHRLHVERLSLSTTKCVLNELSA*VGDEAL
Trigger: AAGAGCTTCATCCCCGACTCAGGCACTGAGTTCATT...CAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGCCGTGTCAGTGAAATaGACTCAGTGCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCAVSVK*TQCLSR
Trigger: CCGACTCAGGCACTGAGTTCATTTCACTGACACGGC...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGTTCCTTCACAAAGATTaGCCAGCAGGACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RIWILGADSFADPATLAGFLHKD*PAGPLP
Trigger: TGGAAGAGGTCCTGCTGGTCAATCTTTGTGAAGGAA...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGCTGAGCCCAGTTCTGTaGGCATGGTGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLLSPVL*AWCQSP
Trigger: AGGGCTCTGACACCATGCTCACAGAACTGGGCTCAG...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATCTGAGCCCAGTTCTGTaGGCATGGTGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDLSPVL*AWCQSP
Trigger: AGGGCTCTGACACCATGCTCACAGAACTGGGCTCAG...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTAAGTTGGGCAAAGAGTaGTCCTGGGCCCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCKLGKE*SWALSG
Trigger: ACCAGAAAGGGCCCAGGAGCACTCTTTGCCCAACTT...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTATTCAAAGAAGTGCTaGCCCCCAGCAAAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVYSKKC*PPAKLG
Trigger: GCCCAACTTTGCTGGGGGGCAGCACTTCTTTGAATA...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTGCAGGAGGATTCTTaGTCTTCTCGGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLLSSLHVHRLHVERLSLQEDS*SSRLPG
Trigger: TCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAG...GCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGGGGGAAGAACGTCAGTaGAGCGATCCCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKGEERQ*SDPFTF
Trigger: AAAGGTGAAGGGATCGCTGCACTGACGTTCTTCCCC...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTGGGACATCTGCCACCTaGAGTAGGTCTCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: NTWIPRLRVRIWILGADSGTSAT*SRSLHS
Trigger: GGAGTGCAGAGACCTACTGCAGGTGGCAGATGTCCC...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGGGCAAAGAGTGCTCCTaGGCCCTTTCTGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKGKECS*ALSGSF
Trigger: AAAGGAACCAGAAAGGGCCCAGGAGCACTCTTTGCC...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCGGCAAAGAGTGCTCCTaGGCCCTTTCTGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSLLSSLHVHRLHVERLSGKECS*ALSGSF
Trigger: AAAGGAACCAGAAAGGGCCCAGGAGCACTCTTTGCC...GCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTTCCACATGTTCTAGGTaGGAGTCCAGGGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFSTCSR*ESRGRV
Trigger: GACACGGCCCCTGGACTCCCACCTAGAACATGTGGA...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp AGTAGTGTAGCTAAGCACGGTGTGTGGACAGTGGGACATCTGCCACCTGCAGTACAGAAGGATCTTTCTTaGAAGTGGCCTTGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SSVAKHGVWTVGHLPPAVQKDLS*KWPCPF
Trigger: AAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTG...TACTGCAGGTGGCAGATGTCCCACTGTCCACACACCGTGCTTAGCTACACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGACGGTGTGTGGACAGTaGGACATCTGCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLTVCGQ*DICHLQ
Trigger: CTGCAGGTGGCAGATGTCCCACTGTCCACACACCGT...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTGGGATACTCGGTGAGTaGTGCCCACTCATTCCCATC +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFGILGE*CPLIPI
Trigger: GATGGGAATGAGTGGGCATCACTCACCGAGTATCCC...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTACTGAGACAAGGTGCTaGGACCTTCCGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTWIPRLRVRIWILGADSTETRC*DLPPGR
Trigger: TCTTCCTGGCGGAAGGTCTCAGCACCTTGTCTCAGT...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTGCAGCATGGATGCACTaGGACAAGGTGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: NTWIPRLRVRIWILGADSAAWMH*DKVLRP
Trigger: AGGTCTCAGCACCTTGTCTCAGTGCATCCATGCTGC...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GGCTTGAACTTCAGTATGCCCGGTTCCACCCTCCAGAAACTTTTGTGTTCTTTGTCTAAGATGTCATCCTaGAGCTTCGGTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLNFSMPGSTLQKLLCSLSKMSS*SFGGRM
Trigger: CATCCTGCCACCGAAGCTTCAGGATGACATCTTAGA...CAAAGAACACAAAAGTTTCTGGAGGGTGGAACCGGGCATACTGAAGTTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp GTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGTCTAAGATGTCATCCTaGAGCTTCGGTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VSEPSKVLRNQYQGSKSQSKMSS*SFGGRM
Trigger: CATCCTGCCACCGAAGCTTCAGGATGACATCTTAGA...CTGAGATTTGGATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTCTGCACAAAGGGGCCTaGAACATGCTCGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCLHKGA*NMLVDL
Trigger: CAAATCAACGAGCATGTTTCAGGCCCCTTTGTGCAG...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGCATTTGCCTCCCGCTTaGTATAGGAAGCATAATGGC +
Preference number: 4 (lower is better)
Translates to: VHRLHVERLSLSTTKCVLHLPPA*YRKHNG
Trigger: GCCATTATGCTTCCTATATCAAGCGGGAGGCAAATG...CAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTTGTCCTTCCATCTCTaGGCCTTCAGGACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSLSFHL*AFRTER
Trigger: CCGCTCTGTCCTGAAGGCCCAGAGATGGAAGGACAA...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp GTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGTGCTCCCATCCACATTaGTCAGAACGAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSEPSKVLRNQYQGSKSQCSHPH*SERRRR
Trigger: CCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCA...CTGAGATTTGGATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR CAA 72 bp ACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTaGGGAGCTGACAGTTTTGCTGATCCTGCCACACTG +
Preference number: 4 (lower is better)
Translates to: TWIPRLRVRIWI*GADSFADPATL
Trigger: CAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp ATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATGGGATACTCGGTGAGTaGTGCCCACTCATTCCCATC +
Preference number: 4 (lower is better)
Translates to: IPRLRVRIWILGADSFADGILGE*CPLIPI
Trigger: GATGGGAATGAGTGGGCATCACTCACCGAGTATCCC...ATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GCACTCCCAAAAGCAAATTACATTGGCTTGAACTTCAGTATGCCCGGTTCCACCTTCCTTCACAAAGATTaGCCAGCAGGACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALPKANYIGLNFSMPGSTFLHKD*PAGPLP
Trigger: TGGAAGAGGTCCTGCTGGTCAATCTTTGTGAAGGAA...GGTGGAACCGGGCATACTGAAGTTCAAGCCAATGTAATTTGCTTTTGGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGGAAGTTTCCATCCTGTaGACCCAGTGGTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGEVSIL*TQWLSK
Trigger: CTTGCTCAACCACTGGGTGCACAGGATGGAAACTTC...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGTTGGGCAAAGAGTaGTCCTGGGCCCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLKLGKE*SWALSG
Trigger: ACCAGAAAGGGCCCAGGAGCACTCTTTGCCCAACTT...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATCAGGCAAGAGGCGCCTaGAGTATCCAATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDQARGA*SIQSFC
Trigger: GCAGAAAGATTGGATACTGCAGGCGCCTCTTGCCTG...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGAAGGGGCCTGAAACATaGTCGTTGATTTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVKGPET*SLICSA
Trigger: TGCAGAACAAATCAACGAGCATGTTTCAGGCCCCTT...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCGTGGCCTTGCCCATTTaGCTCCCGCTTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSVALPI*LPLDIG
Trigger: TCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCAC...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTGAAGATGCTTCATCCAGGATCTTaGAGAACAAGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCREAEPFDHKVCSVLKMLHPGS*RTSRSS
Trigger: GCTGCTTCGGCTTGTTCTCCAAGATCCTGGATGAAG...CATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTTCCATGACCTCCTGCTaGAAGCGCATTTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCSMTSC*KRICTP
Trigger: TGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGA...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTCACAAATCGGCGGTTaGTCTTGGAGGTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSSQIGG*SWRSEP
Trigger: AGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGA...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp GTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGCCAAACATATCCCCATaGCCAGGTCTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: VSEPSKVLRNQYQGSKSQPNISP*PGLPLV
Trigger: TACAAGTGGAAGACCTGGCCATGGGGATATGTTTGG...CTGAGATTTGGATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp GCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGGTAAAGGCTAAGCACGGTGTGTaGACAGTGGGACATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AAQNKDQLEVGCPRLKVKAKHGV*TVGHLP
Trigger: TGGCAGATGTCCCACTGTCCACACACCGTGCTTAGC...CTTTACCTTCAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTAATGAACTCAGTGCCTaGGTCGGGGATGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFNELSA*VGDEAL
Trigger: AAGAGCTTCATCCCCGACTCAGGCACTGAGTTCATT...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CAGACCTACGTATGGAAGCCATGTAGTGTTCTTCACAGGCTGCTGTTGACTGAACAAATTACTCTAGACTaGAGCTGCTTCCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QTYVWKPCSVLHRLLLTEQITLD*SCFPSV
Trigger: CACTGAAGGGAAGCAGCTTCAGTCTAGAGTAATTTG...TTCAGTCAACAGCAGCCTGTGAAGAACACTACATGGCTTCCATACGTAGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TCTGTGAGCATGGTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGACAGGCTGCTGTTGACTaGAATTCCTATCCTCAAATT +
Preference number: 4 (lower is better)
Translates to: SVSMVSEPSKVLRNQYQGQAAVD*NSYPQI
Trigger: AATTTGAGGATAGGAATTTCAGTCAACAGCAGCCTG...TCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACACCATGCTCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTCTGTCCATGACCTCCTaGTGGAAGCGCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFLSMTS*WKRICT
Trigger: AGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAG...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGCTGTTGGAAATAGCCTaGAGGAGGATTCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKLLEIA*RRILAL
Trigger: AAGAGCAAGAATCCTCCTGCAGGCTATTTCCAACAG...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAACCAAGGACTTAGATaGCCTGTGTCCAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLNQGLR*PVSSAA
Trigger: AGCAGCACTGGACACAGGGCATCTAAGTCCTTGGTT...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTCTTCATCCAGGATCTTaGAGAACAAGCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: NTWIPRLRVRIWILGADSLHPGS*RTSRSS
Trigger: GCTGCTTCGGCTTGTTCTCCAAGATCCTGGATGAAG...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGTCCATGACCTCCTGCTaGAAGCGCATTTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLSMTSC*KRICTP
Trigger: TGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGA...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGCAGAAGGATCTTTCTTaGAAGTGGCCTTGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKQKDLS*KWPCPF
Trigger: AAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTG...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTGAAGATGCTCTTCTCGGCTTCCTaGATGAAAAGTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SCREAEPFDHKVCSVLKMLFSAS*MKSEKS
Trigger: GCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAG...CATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGACAGCCATGGAGATCTaGTGTCTCTTCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLTAMEI*CLFSTS
Trigger: TGAAGTGGAGAAGAGACATCAGATCTCCATGGCTGT...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTACAGCCATGGAGATCTaGTGTCTCTTCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFTAMEI*CLFSTS
Trigger: TGAAGTGGAGAAGAGACATCAGATCTCCATGGCTGT...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTAACTCATTGATCCCCTaGCCAAGAGAGTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCNSLIP*PRESKM
Trigger: CATCTTAGACTCTCTTGGTCAGGGGATCAATGAGTT...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp ATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCTGCACAAAGGGGCCTaGAACATGCTCGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: IPRLRVRIWILGADSFADLHKGA*NMLVDL
Trigger: CAAATCAACGAGCATGTTTCAGGCCCCTTTGTGCAG...ATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CATGATTCTATCACTCCAAACATATCCCCATGGCCAGGTCTTCCACTTGTAGTCTCTCAGACACCAGTTTaGAGCAATACCTGGATACCA +
Preference number: 4 (lower is better)
Translates to: HDSITPNISPWPGLPLVVSQTPV*SNTWIP
Trigger: TGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGA...GACTACAAGTGGAAGACCTGGCCATGGGGATATGTTTGGAGTGATAGAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp AGGGCAGTTGCAGCAGCTTCTAACCAAGTGTCTACAACACATGTACTACTGTTTAGCCCTCCAAAGTCCTaGGAAATCAATACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RAVAAASNQVSTTHVLLFSPPKS*EINTRD
Trigger: ATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCT...AAACAGTAGTACATGTGTTGTAGACACTTGGTTAGAAGCTGCTGCAACTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGTCAAAACTGAGACAGTaGAATAGAGAACTAAAATCC +
Preference number: 4 (lower is better)
Translates to: GYGFWELTVLLILPHWQGSKLRQ*NRELKS
Trigger: GGATTTTAGTTCTCTATTGCACTGTCTCAGTTTTGA...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAAACTGTCCATGACCTCCTaGTGGAAGCGCATTTGTACT +
Preference number: 4 (lower is better)
Translates to: QVSTTHVLLFPTCVTSAKLSMTS*WKRICT
Trigger: AGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAG...TTTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTCTGTTGGAAATAGCCTaGAGGAGGATTCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCLLEIA*RRILAL
Trigger: AAGAGCAAGAATCCTCCTGCAGGCTATTTCCAACAG...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGGTCCAGTGCTGCTGCTaGTTTTACCAGTATCTCTTA +
Preference number: 4 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGVQCCC*FYQYLL
Trigger: TAAGAGATACTGGTAAAAGCAGCAGCAGCACTGGAC...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATTGTGTCCAGTGCTGCTaGTGCTTTTACCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDCVQCC*CFYQYL
Trigger: GAGATACTGGTAAAAGCAGCAGCAGCACTGGACACA...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp GCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGGTAAAGCCCTGTGTCCAGTGCTaGTGCTGCTTTTACCAGTAT +
Preference number: 4 (lower is better)
Translates to: AAQNKDQLEVGCPRLKVKPCVQC*CCFYQY
Trigger: ATACTGGTAAAAGCAGCAGCAGCACTGGACACAGGG...CTTTACCTTCAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp ATCAATACCAGGGATCCAAATCTCAGACACCAGTTTGAAGCAATACCTGGATACCCACTCATTCCCATCTaGGAAGCAGAACAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: INTRDPNLRHQFEAIPGYPLIPI*EAEQGD
Trigger: ATCCCCTTGTTCTGCTTCCCAGATGGGAATGAGTGG...GTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTTGAAGATGATCCTGAAGCTTCGGTaGCAGGATGTCTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: SCREAEPFDHKVCSVLKMILKLR*QDVFFI
Trigger: GATGAAAAAGACATCCTGCCACCGAAGCTTCAGGAT...CATCTTCAACACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCAEVQK*CVALVI
Trigger: AATGACTAGAGCTACACACCATTTCTGGACTTCAGC...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CATGATTCTATCACTCCAAACATATCCCCATGGCCAGGTCTTCCACTTGTAGTCCTCGTAATCATCCTCTaGACGCTTCTTTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: HDSITPNISPWPGLPLVVLVIIL*TLLFER
Trigger: TCTCTCAAAAAGAAGCGTTCAGAGGATGATTACGAG...GACTACAAGTGGAAGACCTGGCCATGGGGATATGTTTGGAGTGATAGAATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGGCAGCATGGATGCACTaGGACAAGGTGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKAAWMH*DKVLRP
Trigger: AGGTCTCAGCACCTTGTCTCAGTGCATCCATGCTGC...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGTTTGTACTCCAACCATaGAGGGGGTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKFVLQP*RGWGSR
Trigger: TCTGCTGCCCCACCCCCTTCATGGTTGGAGTACAAA...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGCAGTCTTTAACTCATTaGTCCCCTGACCAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SDTSLKQYLDTKTQSEDMQSLTH*SPDQES
Trigger: ACTCTCTTGGTCAGGGGATCAATGAGTTAAAGACTG...CATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAAACATTTGCCTCCCGCTTaGTATAGGAAGCATAATGGC +
Preference number: 4 (lower is better)
Translates to: QVSTTHVLLFPTCVTSAKHLPPA*YRKHNG
Trigger: GCCATTATGCTTCCTATATCAAGCGGGAGGCAAATG...TTTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATTTCCTGGATGAAAAGTaGGAAGAGCTGTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDFLDEK*EELCLH
Trigger: GTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAA...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGTTCCTGGATGAAAAGTaGGAAGAGCTGTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SDTSLKQYLDTKTQSEDMFLDEK*EELCLH
Trigger: GTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAA...CATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGTCTCAGACACCAGTTTaGAGCAATACCTGGATACCA +
Preference number: 4 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLSQTPV*SNTWIP
Trigger: TGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGA...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp GCACTCCCAAAAGCAAATTACATTGGCTTGAACTTCAGTATGCCCGGTTCCACCAAGCTTCCCAATGCTTaGGTAGAAAGTATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ALPKANYIGLNFSMPGSTKLPNA*VESISR
Trigger: TCTACTGATACTTTCTACTCAAGCATTGGGAAGCTT...GGTGGAACCGGGCATACTGAAGTTCAAGCCAATGTAATTTGCTTTTGGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTCAAATTACATTGGCTTaGACTTCAGTATGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCQITLA*TSVCPV
Trigger: AACCGGGCATACTGAAGTTCAAGCCAATGTAATTTG...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTAAGGGGCCTGAAACATaGTCGTTGATTTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTWIPRLRVRIWILGADSKGPET*SLICSA
Trigger: TGCAGAACAAATCAACGAGCATGTTTCAGGCCCCTT...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp ATAAGATTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGCTGCAGGAGGATTCTTaGTCTTCTCGGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IRFSSLLSSLHVHRLHVELQEDS*SSRLPG
Trigger: TCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAG...CTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATCCTGCAGTAGGTCTCTaGACTCCCAAAAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDPAVGL*TPKSKL
Trigger: TAATTTGCTTTTGGGAGTGCAGAGACCTACTGCAGG...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp GCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGGTAAAGCTCTTCTCGGCTTCCTaGATGAAAAGTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AAQNKDQLEVGCPRLKVKLFSAS*MKSEKS
Trigger: GCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAG...CTTTACCTTCAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCAEVQK*CVALVI
Trigger: AATGACTAGAGCTACACACCATTTCTGGACTTCAGC...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CCA 90 bp TATTTAGTGTGTGCTTCCTTCAGCCCTAAATACAGCATTAGCATCAAATCAAGGCTCCTCCCAGGATTCTaGAAAGCACACCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: YLVCASFSPKYSISIKSRLLPGF*KAHLTP
Trigger: TGGAGTCAGGTGTGCTTTCCAGAATCCTGGGAGGAG...CCTTGATTTGATGCTAATGCTGTATTTAGGGCTGAAGGAAGCACACACTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGCTCGTAATCATCCTCTaGACGCTTCTTTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLLVIIL*TLLFER
Trigger: TCTCTCAAAAAGAAGCGTTCAGAGGATGATTACGAG...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTCTGAAACATGCTCGTTaGTTTGTTCTGCAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCLKHAR*FVLQSL
Trigger: TAAAGACTGCAGAACAAATCAACGAGCATGTTTCAG...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp TATTTAGTGTGTGCTTCCTTCAGCCCTAAATACAGCATTAGCATCAAATCAAGGGGAGGAGAGACTAGGTaGCCACTAAACTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YLVCASFSPKYSISIKSRGGETR*PLNSFR
Trigger: TCTGAAGGAGTTTAGTGGTCACCTAGTCTCTCCTCC...CCTTGATTTGATGCTAATGCTGTATTTAGGGCTGAAGGAAGCACACACTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp ATAAGATTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGTATTCAAAGAAGTGCTaGCCCCCAGCAAAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: IRFSSLLSSLHVHRLHVEYSKKC*PPAKLG
Trigger: GCCCAACTTTGCTGGGGGGCAGCACTTCTTTGAATA...CTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAATCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAAAGTATCCAATCTTTCTaGTCCCATCCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKSIQSF*SHPHWS
Trigger: TGACCAATGTGGATGGGAGCAGAAAGATTGGATACT...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGTCAAAACTGAGACAGTaGAATAGAGAACTAAAATCC +
Preference number: 4 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVSKLRQ*NRELKS
Trigger: GGATTTTAGTTCTCTATTGCACTGTCTCAGTTTTGA...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGATCTTGACAAAGAACTaGACAAAGGGGCCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLILTKN*TKGPET
Trigger: TGTTTCAGGCCCCTTTGTGCAGTTCTTTGTCAAGAT...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCATCTTGACAAAGAACTaGACAAAGGGGCCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSILTKN*TKGPET
Trigger: TGTTTCAGGCCCCTTTGTGCAGTTCTTTGTCAAGAT...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR CAA 72 bp AAATCAATACCAGGGATCCAAATCTCAGACACCAGTTaGAAGCAATACCTGGATACCAAGACTCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KSIPGIQISDTS*KQYLDTKTQSE
Trigger: CTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTGGATCCCTGGTATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
3UTR CAA 72 bp GTCAGTGCAGCGATCCCTTCACCTTTAGTTAAAGAATaGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSAAIPSPLVKE*DCAAQNKDQLE
Trigger: CTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAATTCTTTAACTAAAGGTGAAGGGATCGCTGCACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR GCA 90 bp CAGACCTACGTATGGAAGCCATGTAGTGTTCTTCACAGGCTGCTGTTGACTGAAGATTGTCATATTCATTaGCTTATTTTCCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: QTYVWKPCSVLHRLLLTEDCHIH*LIFHEE
Trigger: TTCCTCGTGGAAAATAAGGCAATGAATATGACAATC...TTCAGTCAACAGCAGCCTGTGAAGAACACTACATGGCTTCCATACGTAGGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGTGCTCCCATCCACATTaGTCAGAACGAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKCSHPH*SERRRR
Trigger: CCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCA...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp CTCAGCAAACCTTACCTGAAGAACCTTTTAAGAAAGTACAGATTTCCAGGTCCTATCCTGAAGCTTCGGTaGCAGGATGTCTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LSKPYLKNLLRKYRFPGPILKLR*QDVFFI
Trigger: GATGAAAAAGACATCCTGCCACCGAAGCTTCAGGAT...AGGACCTGGAAATCTGTACTTTCTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp ATAAGATTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGCAGTCTTTAACTCATTaGTCCCCTGACCAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: IRFSSLLSSLHVHRLHVEQSLTH*SPDQES
Trigger: ACTCTCTTGGTCAGGGGATCAATGAGTTAAAGACTG...CTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAATCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CAAATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGAAGTGTGTTCTGTGTTaGAGATGTTATAATGATGGG +
Preference number: 4 (lower is better)
Translates to: QISDTSLKQYLDTKTQSEKCVLC*RCYNDG
Trigger: CCCATCATTATAACATCTTCAACACAGAACACACTT...CTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR GCA 90 bp CTCAGCAAACCTTACCTGAAGAACCTTTTAAGAAAGTACAGATTTCCAGGTCCTAGTATCCAATCTTTCTaGTCCCATCCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSKPYLKNLLRKYRFPGPSIQSF*SHPHWS
Trigger: TGACCAATGTGGATGGGAGCAGAAAGATTGGATACT...AGGACCTGGAAATCTGTACTTTCTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp ATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATAAACAGACCTACGTATaGAAGCCATGTAGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPRLRVRIWILGADSFADKQTYV*KPCSVL
Trigger: AAGAACACTACATGGCTTCCATACGTAGGTCTGTTT...ATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CCA 90 bp TCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGTCACTAGAGATGATTTaGTGTATTTGTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SDTSLKQYLDTKTQSEDMSLEMI*CICDEA
Trigger: TGCCTCATCACAAATACACCAAATCATCTCTAGTGA...CATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGAACTCATTGATCCCCTaGCCAAGAGAGTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKNSLIP*PRESKM
Trigger: CATCTTAGACTCTCTTGGTCAGGGGATCAATGAGTT...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp ATAAGATTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGCTGAAACATGCTCGTTaGTTTGTTCTGCAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: IRFSSLLSSLHVHRLHVELKHAR*FVLQSL
Trigger: TAAAGACTGCAGAACAAATCAACGAGCATGTTTCAG...CTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAATCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR TCA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGGAATTTAGGAACTTCTaGGGGCCACAAATACACACA +
Preference number: 4 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKEFRNF*GPQIHT
Trigger: TGTGTGTATTTGTGGCCCTCAGAAGTTCCTAAATTC...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR TCA 90 bp ATAAGATTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAAGTGTGTTCTGTGTTaGAGATGTTATAATGATGGG +
Preference number: 4 (lower is better)
Translates to: IRFSSLLSSLHVHRLHVEKCVLC*RCYNDG
Trigger: CCCATCATTATAACATCTTCAACACAGAACACACTT...CTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAATCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CCA 90 bp GCTTCAGTCTCAGGCTGGCTCGAAGGCGGCGGCCGAGCCCATCCATaGCCCCTGGAGTGCCCGGCTCCCGCTCCCAGCTCCGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: ASVSGWLEGGGRAHP*PLECPAPAPSSALA
Trigger: GGCCAGCGCGGAGCTGGGAGCGGGAGCCGGGCACTCCAGGGGCCATGGATGGGCTCGGCCGCCGCCTTCGAGCCAGCCTGAGACTGAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369752.5
ENST00000473822.5
CDS GCA 90 bp GACCAGAGCCTGACCAGCAGCGGGAGAAGGGGCATCAGGTCCTCGTaGTTGTGGGGCTGCAGAGGGAGCACTAGCATGGCAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: DQSLTSSGRRGIRSS*LWGCRGSTSMAAGP
Trigger: AGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCCGCTGCTGGTCAGGCTCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 90 bp ACCAGCAGCGGGAGAAGGGGCATCAGGTCCTCGTGCTTGTGGGGCTaGAGAGGGAGCACTAGCATGGCAGCAGGTCCTGGGCTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: TSSGRRGIRSSCLWG*RGSTSMAAGPGLCF
Trigger: AAAGCACAGCCCAGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCCGCTGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS TCA 90 bp GGGGTGGTCCTGCTCGGAGTTGAAGCAGTCGGCGTTGGAAGAGCCTaGACACCCGGCCTACCACTTGTCCTTCCATCTCTGGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GVVLLGVEAVGVGRA*TPGLPLVLPSLGLQ
Trigger: CTGAAGGCCCAGAGATGGAAGGACAAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAACTCCGAGCAGGACCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000473682.5
CDS GCA 90 bp GGCCAGGGCCGGCAGGCAAGAGGCGCCTGCAGTATCCAATCTTTCTaGTCCCATCCACATTGGTCAGAACGAAGGAGAAGGTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GQGRQARGACSIQSF*SHPHWSERRRRSPW
Trigger: CCAGGGAGACCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGCCTCTTGCCTGCCGGCCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000477586.5
CDS CCA 90 bp GCATCAGGTCCTCGTGCTTGTGGGGCTGCAGAGGGAGCACTAGCATaGCAGCAGGTCCTGGGCTGTGCTTTTTCTACAACCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASGPRACGAAEGALA*QQVLGCAFSTTSAA
Trigger: GGCAGCACTGGTTGTAGAAAAAGCACAGCCCAGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 90 bp AAGGGCTTCTCCCAACTGGGTATGAAGGAGCACAAGGCTGAGGGCTaGGGAGGGGGATTTATGGGGAATGGTGGGTGCAGCAGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: KGFSQLGMKEHKAEG*GGGFMGNGGCSREV
Trigger: GACCTCCCTGCTGCACCCACCATTCCCCATAAATCCCCCTCCCCAGCCCTCAGCCTTGTGCTCCTTCATACCCAGTTGGGAGAAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 90 bp TTGAGGGTACTGGGTGAGTTGGTGGGCAAGCGCTGCCACCTTCAGTaGCAGCACAATCTGGGGTCAGCAAAGAGGGGTAGCAAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LRVLGELVGKRCHLQ*QHNLGSAKRGSKCA
Trigger: GGCACACTTGCTACCCCTCTTTGCTGACCCCAGATTGTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 90 bp GATGAAGCTCTTGAGAGTGACAGTCTTCCCAGGAGCAGGGAAGGCTaGCTCTCGGAGGCCCTGCATGAACGGGTAGATGACAGCCATGGA +
Preference number: 5 (lower is better)
Translates to: DEALESDSLPRSREG*LSEALHERVDDSHG
Trigger: TCCATGGCTGTCATCTACCCGTTCATGCAGGGCCTCCGAGAGGCAGCCTTCCCTGCTCCTGGGAAGACTGTCACTCTCAAGAGCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
CDS TCA 90 bp GAGAATCCGGGTGACCTCCACACCTCAAGGCCGCCTTGCCAATGCTaGGATACCTGGATACTGGCCAGAACCACCAGTCACTCAGGATCA +
Preference number: 5 (lower is better)
Translates to: ENPGDLHTSRPPCQC*DTWILARTTSHSGS
Trigger: TGATCCTGAGTGACTGGTGGTTCTGGCCAGTATCCAGGTATCTCAGCATTGGCAAGGCGGCCTTGAGGTGTGGAGGTCACCCGGATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS GCA 90 bp AGATTGACCAGCAGGACCTCTTCCATAGGGCTGTCCATGACCTCCTaGTGGAAGCGCATTTGTACTCCAACCATGAAGGGGGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLTSRTSSIGLSMTS*WKRICTPTMKGVGQ
Trigger: CTGCCCCACCCCCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAGCCCTATGGAAGAGGTCCTGCTGGTCAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CCA 90 bp TCCACACCTCAAGGCCGCCTTGCCAATGCTGAGATACCTGGATACTaGCCAGAACCACCAGTCACTCAGGATCAGGGCCAAATGGGCAGT +
Preference number: 5 (lower is better)
Translates to: STPQGRLANAEIPGY*PEPPVTQDQGQMGS
Trigger: ACTGCCCATTTGGCCCTGATCCTGAGTGACTGGTGGTTCTGGCCAGTATCCAGGTATCTCAGCATTGGCAAGGCGGCCTTGAGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS GCA 90 bp AAGAAGAAATCCTTGAGGGTACTGGGTGAGTTGGTGGGCAAGCGCTaGCACCTTCAGTGCCAGCACAATCTGGGGTCAGCAAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: KKKSLRVLGELVGKR*HLQCQHNLGSAKRG
Trigger: ACCCCTCTTTGCTGACCCCAGATTGTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 90 bp CCACCAGTCACTCAGGATCAGGGCCAAATGGGCAGTTTCCACACCTaGCCTGGTAGACTTGAAACCATGGGGAGCCAAGCAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: PPVTQDQGQMGSFHT*PGRLETMGSQAEER
Trigger: TCTTTCCTCTGCTTGGCTCCCCATGGTTTCAAGTCTACCAGGGCAGGTGTGGAAACTGCCCATTTGGCCCTGATCCTGAGTGACTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477586.5
ENST00000488786.1
CDS CCA 90 bp CTGGATACTGGCCAGAACCACCAGTCACTCAGGATCAGGGCCAAATaGGCAGTTTCCACACCTGCCCTGGTAGACTTGAAACCATGGGGA +
Preference number: 5 (lower is better)
Translates to: LDTGQNHQSLRIRAK*AVSTPALVDLKPWG
Trigger: TCCCCATGGTTTCAAGTCTACCAGGGCAGGTGTGGAAACTGCCCATTTGGCCCTGATCCTGAGTGACTGGTGGTTCTGGCCAGTATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477586.5
ENST00000488786.1
CDS TCA 90 bp AGCAGGGAGGTCAGAATGGCCACCAGCATCAAAAGAAGAAATCCTTaGGGGTACTGGGTGAGTTGGTGGGCAAGCGCTGCCACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SREVRMATSIKRRNP*GYWVSWWASAATFS
Trigger: ACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATGCTGGTGGCCATTCTGACCTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 90 bp CTGGTTCAGCTGATCCTCATGTATCTTCTAGGGCCCTCCACGAACTaGTCCTCTCCCTCCCTGGCAGAGGCTGGGCTCATGCTAAATAAT +
Preference number: 5 (lower is better)
Translates to: LVQLILMYLLGPSTN*SSPSLAEAGLMLNN
Trigger: ATTATTTAGCATGAGCCCAGCCTCTGCCAGGGAGGGAGAGGACCAGTTCGTGGAGGGCCCTAGAAGATACATGAGGATCAGCTGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 90 bp AAAGAACCACGGGAGGCACGGCTCAAAGGGACACTACCAGGCAGGTaGAAGAGACTCTACTTGCCCCTGAGCGTCATAATGTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: KEPREARLKGTLPGR*KRLYLPLSVIMFSY
Trigger: GTATGAGAACATTATGACGCTCAGGGGCAAGTAGAGTCTCTTCCACCTGCCTGGTAGTGTCCCTTTGAGCCGTGCCTCCCGTGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS-3UTR CAA 90 bp TCTGTGAGCATGGTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGATTGAAGCAGTCGGCGTaGGAAGAGCCTGAACACCCG +
Preference number: 5 (lower is better)
Translates to: SVSMVSEPSKVLRNQYQGLKQSA*EEPEHP
Trigger: CGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAA...TCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACACCATGCTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp GTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGAACAAGGGGATAGCTTaGAGCAGCCGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VHRLHVERLSLSTTKCVLNKGIA*SSRSSS
Trigger: GGAGGAGGAGCGGCTGCTCAAAGCTATCCCCTTGTT...CAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp AGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGTTCTTGGAAGTGGCCTaGCCCATTTGCCTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: RIWILGADSFADPATLAGFLEVA*PICLPL
Trigger: AAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAA...CCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS GCA 90 bp TGGATGGCATGGCCCCCATGGATTCTGCTCAAATTCTGTCTCAGATaGACTGGCACTCAAATTAGCTCCAAGAGAAGTCCTGGGGACCTC +
Preference number: 5 (lower is better)
Translates to: WMAWPPWILLKFCLR*TGTQISSKRSPGDL
Trigger: GAGGTCCCCAGGACTTCTCTTGGAGCTAATTTGAGTGCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 90 bp GGGTCAGAGCATAATGAAGTCCTTTCTGGTCACCAGTGGATGGCATaGCCCCCATGGATTCTGCTCAAATTCTGTCTCAGATGCACTGGC +
Preference number: 5 (lower is better)
Translates to: GSEHNEVLSGHQWMA*PPWILLKFCLRCTG
Trigger: GCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAGAAAGGACTTCATTATGCTCTGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS-3UTR CAA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGAACAAGGGGATAGCTTaGAGCAGCCGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKNKGIA*SSRSSS
Trigger: GGAGGAGGAGCGGCTGCTCAAAGCTATCCCCTTGTT...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp GTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGATCCAAATCTCAGATGATGCAGTACACTTaGGGAAGGCGAGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: VSEPSKVLRNQYQGSKSQMMQYT*GRRGPG
Trigger: CCCTGGCCCTCGCCTTCCCAAAGTGTACTGCATCAT...CTGAGATTTGGATCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGGTTCCTTCACAAAGATaGACCAGCAGGACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GYGFWELTVLLILPHWQGVPSQR*TSRTSS
Trigger: GGAAGAGGTCCTGCTGGTCAATCTTTGTGAAGGAAC...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp GTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGAATCGGCGGTTGGTCTaGGAGGTCAGAGCCTTACAG +
Preference number: 5 (lower is better)
Translates to: VHRLHVERLSLSTTKCVLNRRLV*EVRALQ
Trigger: CTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATT...CAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TCTGTGAGCATGGTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGAAATCGGCGGTTGGTCTaGGAGGTCAGAGCCTTACAG +
Preference number: 5 (lower is better)
Translates to: SVSMVSEPSKVLRNQYQGNRRLV*EVRALQ
Trigger: CTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATT...TCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACACCATGCTCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp CATGATTCTATCACTCCAAACATATCCCCATGGCCAGGTCTTCCACTTGTAGTCATGATGCAGTACACTTaGGGAAGGCGAGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: HDSITPNISPWPGLPLVVMMQYT*GRRGPG
Trigger: CCCTGGCCCTCGCCTTCCCAAAGTGTACTGCATCAT...GACTACAAGTGGAAGACCTGGCCATGGGGATATGTTTGGAGTGATAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp CCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGTGCTGCTGGAAGCGCATTaGTACTCCAACCATGAAGGG +
Preference number: 5 (lower is better)
Translates to: PQTSCREAEPFDHKVCSVLLEAH*YSNHEG
Trigger: CCCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAG...CACAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp GTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTTCTGCTGCTGGAAGCGCATTaGTACTCCAACCATGAAGGG +
Preference number: 5 (lower is better)
Translates to: VHRLHVERLSLSTTKCVLLLEAH*YSNHEG
Trigger: CCCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAG...CAGAACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTTCACAAATCGGCGGTaGGTCTTGGAGGTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SLHVHRLHVERLSLSTTKFTNRR*VLEVRA
Trigger: GGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAA...CTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp ACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTGTGATGGGAGAGGGCAGTaGCAGCAGCTTCTAACCAAG +
Preference number: 5 (lower is better)
Translates to: TCPQTSCREAEPFDHKVCDGRGQ*QQLLTK
Trigger: CTTGGTTAGAAGCTGCTGCAACTGCCCTCTCCCATC...ACACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS GCA 90 bp CGCTTCTTTTTGAGAGAAACCACAAGAAGGTATTCAAAGAAGTGCTaGCCCCCAGCAAAGTTGGGCAAAGAGTGCTCCTGGGCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RFFLRETTRRYSKKC*PPAKLGKECSWALS
Trigger: AGAAAGGGCCCAGGAGCACTCTTTGCCCAACTTTGCTGGGGGGCAGCACTTCTTTGAATACCTTCTTGTGGTTTCTCTCAAAAAGAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
ENST00000473822.5
ENST00000477586.5
ENST00000488786.1
CDS GCA 90 bp AAGTCCTTTCTGGTCACCAGTGGATGGCATGGCCCCCATGGATTCTaGTCAAATTCTGTCTCAGATGCACTGGCACTCAAATTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: KSFLVTSGWHGPHGF*SNSVSDALALKLAP
Trigger: TGGAGCTAATTTGAGTGCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAGAAAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS-3UTR CAA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTTGGTCCTGCTCGGAGTaGAAGCAGTCGGCGTTGGAA +
Preference number: 5 (lower is better)
Translates to: NTWIPRLRVRIWILGADSWSCSE*KQSALE
Trigger: TTCCAACGCCGACTGCTTCAACTCCGAGCAGGACCA...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp TCTGTGAGCATGGTGTCAGAGCCCTCCAAAGTCCTGAGAAATCAATACCAGGGAGTTCCTTCACAAAGATaGACCAGCAGGACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SVSMVSEPSKVLRNQYQGVPSQR*TSRTSS
Trigger: GGAAGAGGTCCTGCTGGTCAATCTTTGTGAAGGAAC...TCCCTGGTATTGATTTCTCAGGACTTTGGAGGGCTCTGACACCATGCTCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp CATGATTCTATCACTCCAAACATATCCCCATGGCCAGGTCTTCCACTTGTAGTCTTCACAAATCGGCGGTaGGTCTTGGAGGTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: HDSITPNISPWPGLPLVVFTNRR*VLEVRA
Trigger: GGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAA...GACTACAAGTGGAAGACCTGGCCATGGGGATATGTTTGGAGTGATAGAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp TTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCCCTGCAGGAGGATTCTaGCTCTTCTCGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LKQYLDTKTQSEDMDFGSPAGGF*LFSASW
Trigger: CCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAGG...GCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGCCTGCAGGAGGATTCTaGCTCTTCTCGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLPAGGF*LFSASW
Trigger: CCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAGG...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS TCA 90 bp GCCTGCAGGAGGATTCTTGCTCTTCTCGGCTTCCTGGATGAAAAGTaGGAAGAGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTT +
Preference number: 5 (lower is better)
Translates to: ACRRILALLGFLDEK*EELCLHKLLHKSAV
Trigger: AACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS GCA 90 bp CAGAGCCTTACAGAAGGATCTTTCTTGGAAGTGGCCTTGCCCATTTaGCTCCCGCTTGATATAGGAAGCATAATGGCCCACAATCTTGAC +
Preference number: 5 (lower is better)
Translates to: QSLTEGSFLEVALPI*LPLDIGSIMAHNLD
Trigger: GTCAAGATTGTGGGCCATTATGCTTCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 90 bp ACTGGAATTCTTAGAACAGTGTTCTACCTGCTGCCTCAGTGTGCTTaGTGCCTTAAAACGATAGCATTCCCCTGTGCATGGGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: TGILRTVFYLLPQCA*CLKTIAFPCAWVET
Trigger: AGTCTCCACCCATGCACAGGGGAATGCTATCGTTTTAAGGCACCAAGCACACTGAGGCAGCAGGTAGAACACTGTTCTAAGAATTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS-3UTR CAA 90 bp TATTTAGTGTGTGCTTCCTTCAGCCCTAAATACAGCATTAGCATCAAATCAAGGCACCCGGCCTACCACTaGTCCTTCCATCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: YLVCASFSPKYSISIKSRHPAYH*SFHLWA
Trigger: GGCCCAGAGATGGAAGGACAAGTGGTAGGCCGGGTG...CCTTGATTTGATGCTAATGCTGTATTTAGGGCTGAAGGAAGCACACACTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp GGATATGGATTTTGGGAGCTGACAGTTTTGCTGATCCTGCCACACTGGCAGGGGCCTGAAACATGCTCGTaGATTTGTTCTGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: GYGFWELTVLLILPHWQGPETCS*ICSAVF
Trigger: AAAGACTGCAGAACAAATCAACGAGCATGTTTCAGG...CCCCTGCCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCAAAATCCATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATTTCTTGGAAGTGGCCTaGCCCATTTGCCTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDFLEVA*PICLPL
Trigger: AAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAA...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAATGGGAGCTGACAGTTTaGCTGATCCTGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKWELTV*LILPHW
Trigger: CCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCA...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATATGTGGGAGCTGACAGTTTaGCTGATCCTGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: SDTSLKQYLDTKTQSEDMWELTV*LILPHW
Trigger: CCAGTGTGGCAGGATCAGCAAAACTGTCAGCTCCCA...CATATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTGATGGGAGAGGGCAGTaGCAGCAGCTTCTAACCAAG +
Preference number: 5 (lower is better)
Translates to: NTWIPRLRVRIWILGADSDGRGQ*QQLLTK
Trigger: CTTGGTTAGAAGCTGCTGCAACTGCCCTCTCCCATC...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CCA 90 bp AAACTGAGACAGTGCAATAGAGAACTAAAATCCACATGTTCTAGGTaGGAGTCCAGGGGCCGTGTCAGTGAAATGAACTCAGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: KLRQCNRELKSTCSR*ESRGRVSEMNSVPE
Trigger: CTCAGGCACTGAGTTCATTTCACTGACACGGCCCCTGGACTCCCACCTAGAACATGTGGATTTTAGTTCTCTATTGCACTGTCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CCA 90 bp AGAGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTTGGTCTTaGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGAAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RAVSSQTSSQIGGWS*RSEPYRRIFLGSGL
Trigger: AAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 90 bp CATAATGAAGTCCTTTCTGGTCACCAGTGGATGGCATGGCCCCCATaGATTCTGCTCAAATTCTGTCTCAGATGCACTGGCACTCAAATT +
Preference number: 5 (lower is better)
Translates to: HNEVLSGHQWMAWPP*ILLKFCLRCTGTQI
Trigger: AATTTGAGTGCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAGAAAGGACTTCATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 90 bp AAATCAAGCCAGAGCCCATTTAGTATAATCTCATTGATCCATTCCTaGAGTGGAGTCTGTGAGAATCCGGGTGACCTCCACACCTCAAGG +
Preference number: 5 (lower is better)
Translates to: KSSQSPFSIISLIHS*SGVCENPGDLHTSR
Trigger: CCTTGAGGTGTGGAGGTCACCCGGATTCTCACAGACTCCACTCCAGGAATGGATCAATGAGATTATACTAAATGGGCTCTGGCTTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS-3UTR CAA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATCTGCTCCCATCCACATaGGTCAGAACGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDLLPST*VRTKEK
Trigger: CTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAG...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp AATACCTGGATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTCTGCTCCCATCCACATaGGTCAGAACGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: NTWIPRLRVRIWILGADSLLPST*VRTKEK
Trigger: CTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAG...ACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTATCCAGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGACTTCATCCAGGATCTaGGAGAACAAGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGTSSRI*ENKPKQ
Trigger: CTGCTTCGGCTTGTTCTCCAAGATCCTGGATGAAGT...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS CCA 90 bp GTGAGAAGAGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTTaGTCTTGGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: VRRAVSSQTSSQIGG*SWRSEPYRRIFLGS
Trigger: ACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 90 bp AGTTTTGCTGATCCTGCCACACTGGCAGGGGCTGAAGTCCAGAAATaGTGTGTAGCTCTAGTCATTCTTATTCACCACAGCTCTTATTTC +
Preference number: 5 (lower is better)
Translates to: SFADPATLAGAEVQK*CVALVILIHHSSYF
Trigger: GAAATAAGAGCTGTGGTGAATAAGAATGACTAGAGCTACACACCATTTCTGGACTTCAGCCCCTGCCAGTGTGGCAGGATCAGCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS-3UTR CAA 90 bp CCAAGTGTCTACAACACATGTACTACTGTTTCCTACCTGTGTCACCTCTGCAAACTCCCGCTTGGGAAATaGGTAGGTGATTATAGGCTC +
Preference number: 5 (lower is better)
Translates to: PSVYNTCTTVSYLCHLCKLPLGK*VGDYRL
Trigger: GAGCCTATAATCACCTACCAATTTCCCAAGCGGGAG...TTTGCAGAGGTGACACAGGTAGGAAACAGTAGTACATGTGTTGTAGACACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TTTTCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGACTTCATCCAGGATCTaGGAGAACAAGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FSSLLSSLHVHRLHVERLTSSRI*ENKPKQ
Trigger: CTGCTTCGGCTTGTTCTCCAAGATCCTGGATGAAGT...CAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCCTTTCGACCACAAAGTGTACAGAAGGATCTTTCTaGGAAGTGGCCTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: LHVHRLHVERLSLSTTKCTEGSF*EVALPI
Trigger: AATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGT...ACACTTTGTGGTCGAAAGGCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp TCCTCTTTACTCTCGTCCTTACATGTCCACAGACTTCATGTAGAGAGGCTGAGCGTGAGGATATGGATTTaGGGAGCTGACAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: SSLLSSLHVHRLHVERLSVRIWI*GADSFA
Trigger: AGCAAAACTGTCAGCTCCCAAAATCCATATCCTCAC...GCTCAGCCTCTCTACATGAAGTCTGTGGACATGTAAGGACGAGAGTAAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS TCA 90 bp GGAAATAGCCTGCAGGAGGATTCTTGCTCTTCTCGGCTTCCTGGATaGAAAGTGAGAAGAGCTGTGTCTTCACAAACTTCTTCACAAATC +
Preference number: 5 (lower is better)
Translates to: GNSLQEDSCSSRLPG*KVRRAVSSQTSSQI
Trigger: GATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAGGCTATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS-3UTR CAA 90 bp GGTAGGATGTCCAAGACTGAAGGTAAAGGACTAGTGCAAACTGAAAGTGATGGGGTGAGGATATGGATTTaGGGAGCTGACAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: GRMSKTEGKGLVQTESDGVRIWI*GADSFA
Trigger: AGCAAAACTGTCAGCTCCCAAAATCCATATCCTCAC...CCCATCACTTTCAGTTTGCACTAGTCCTTTACCTTCAGTCTTGGACATCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp CAAGGGTACATTTGTAATAAACCTCAGCAAACCTTACCTGAAGAACCTTTTAAGAAAGCTTCCCCTGAATaGTCCTGGGGTGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: QGYICNKPQQTLPEEPFKKASPE*SWGGPA
Trigger: AGCAGGACCACCCCAGGACAATTCAGGGGAAGCTTT...CTTAAAAGGTTCTTCAGGTAAGGTTTGCTGAGGTTTATTACAAATGTACCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp GCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGAAGGTAAAGACAGAAGGATCTTTCTaGGAAGTGGCCTTGCCCATT +
Preference number: 5 (lower is better)
Translates to: AAQNKDQLEVGCPRLKVKTEGSF*EVALPI
Trigger: AATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGT...CTTTACCTTCAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS GCA 90 bp CATTCGACGGATGAGGAAATTGAAACTCAGGGCAGAAGTTTCTTCTaGTTGTCCTACTTCAACTACTTTCTTACTTGGCTAGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: HSTDEEIETQGRSFF*LSYFNYFLTWLEWE
Trigger: TTCCCACTCTAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAACTTCTGCCCTGAGTTTCAATTTCCTCATCCGTCGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS-3UTR CAA 90 bp ATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGGATCCTGAAACATGCTCGTaGATTTGTTCTGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: ISDTSLKQYLDTKTQSEDPETCS*ICSAVF
Trigger: AAAGACTGCAGAACAAATCAACGAGCATGTTTCAGG...ATCCTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS-3UTR CAA 90 bp CAAATCTCAGACACCAGTTTGAAGCAATACCTGGATACCAAGACTCAGAGTGAGCCACTTGTAGTCCACTaGATTGTCATATTCATTGCC +
Preference number: 5 (lower is better)
Translates to: QISDTSLKQYLDTKTQSEPLVVH*IVIFIA
Trigger: GGCAATGAATATGACAATCAAGTGGACTACAAGTGG...CTCACTCTGAGTCTTGGTATCCAGGTATTGCTTCAAACTGGTGTCTGAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS-3UTR CAA 90 bp ATACCAAGACTCAGAGTGAGGATATGGATTTTGGGAGCTGACAGTTTTGCTGATGCAAATTACATTGGCTaGAACTTCAGTATGCCCGGT +
Preference number: 5 (lower is better)
Translates to: IPRLRVRIWILGADSFADANYIG*NFSMPG
Trigger: ACCGGGCATACTGAAGTTCAAGCCAATGTAATTTGC...ATCAGCAAAACTGTCAGCTCCCAAAATCCATATCCTCACTCTGAGTCTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS TCA 90 bp GCCAGGAAGATGATTTTTCTCTCCAGCACGGCAGAGGCAAAGATCTaGAGTATCTGTTCAAAACTGAGACAGTGCAATAGAGAACTAAAA +
Preference number: 5 (lower is better)
Translates to: ARKMIFLSSTAEAKI*SICSKLRQCNRELK
Trigger: TTTTAGTTCTCTATTGCACTGTCTCAGTTTTGAACAGATACTTCAGATCTTTGCCTCTGCCGTGCTGGAGAGAAAAATCATCTTCCTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS TCA 90 bp CTTTTTCATCACCAACCGACATTAAGAAGGTTCCTTCACAAAGATTaGCCAGCAGGACCTGAAATAAACATAGACTGGCTTTCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LFHHQPTLRRFLHKD*PAGPEINIDWLSLV
Trigger: GACCAGAGAAAGCCAGTCTATGTTTATTTCAGGTCCTGCTGGTCAATCTTTGTGAAGGAACCTTCTTAATGTCGGTTGGTGATGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468692.1
CDS TCA 90 bp CCGCTTGGGAAATTGGTAGGTGATTATAGGCTCGTAATCATCCTCTaGACGCTTCTTTTTGAGAGAAACCACAAGAAGGTATTCAAAGAA +
Preference number: 5 (lower is better)
Translates to: PLGKLVGDYRLVIIL*TLLFERNHKKVFKE
Trigger: TTCTTTGAATACCTTCTTGTGGTTTCTCTCAAAAAGAAGCGTTCAGAGGATGATTACGAGCCTATAATCACCTACCAATTTCCCAAGCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
ENST00000473822.5
ENST00000477586.5
ENST00000488786.1
CDS-3UTR CAA 90 bp TTGGACTGTGCTGCTCAAAATAAAGATCAGTTGGAGGTAGGATGTCCAAGACTGCCTTTAGTTAAAGAATaGGACTGTGCTGCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: LDCAAQNKDQLEVGCPRLPLVKE*DCAAQN
Trigger: ATTTTGAGCAGCACAGTCCAATTCTTTAACTAAAGG...CAGTCTTGGACATCCTACCTCCAACTGATCTTTATTTTGAGCAGCACAGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS CCA 72 bp GGGGTGGTCCCCCATGGCCGCGCTTCAGTCTCAGGCTaGCTCGAAGGCGGCGGCCGAGCCCATCCATGGCCC +
Preference number: 6 (lower is better)
Translates to: GVVPHGRASVSG*LEGGGRAHPWP
Trigger: GGGCCATGGATGGGCTCGGCCGCCGCCTTCGAGCCAGCCTGAGACTGAAGCGCGGCCATGGGGGACCACCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369752.5
CDS CCA 72 bp GGCACTAACCCCCATGGCCGCGCTTCAGTCTCAGGCTaGCTCGAAGGCGGCGGCCGAGCCCATCCATGGCCC +
Preference number: 6 (lower is better)
Translates to: GTNPHGRASVSG*LEGGGRAHPWP
Trigger: GGGCCATGGATGGGCTCGGCCGCCGCCTTCGAGCCAGCCTGAGACTGAAGCGCGGCCATGGGGGTTAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473822.5
CDS CAA 90 bp CAGAGCCTGACCAGCAGCGGGAGAAGGGGCATCAGGTCCTCGTGCTaGTGGGGCTGCAGAGGGAGCACTAGCATGGCAGCAGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: QSLTSSGRRGIRSSC*WGCRGSTSMAAGPG
Trigger: CCCAGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCCGCTGCTGGTCAGGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp GGGAGAAGGGGCATCAGGTCCTCGTGCTTGTGGGGCTaGAGAGGGAGCACTAGCATGGCAGCAGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: GRRGIRSSCLWG*RGSTSMAAGPG
Trigger: CCCAGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp CTGACCAGCAGCGGGAGAAGGGGCATCAGGTCCTCGTaGTTGTGGGGCTGCAGAGGGAGCACTAGCATGGCA +
Preference number: 6 (lower is better)
Translates to: LTSSGRRGIRSS*LWGCRGSTSMA
Trigger: TGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCCGCTGCTGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp AGCAGCGGGAGAAGGGGCATCAGGTCCTCGTGCTTGTaGGGCTGCAGAGGGAGCACTAGCATGGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SSGRRGIRSSCL*GCRGSTSMAAG
Trigger: ACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGGACCTGATGCCCCTTCTCCCGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp CTGGGGTGGTCCTGCTCGGAGTTGAAGCAGTCGGCGTaGGAAGAGCCTGAACACCCGGCCTACCACTTGTCC +
Preference number: 6 (lower is better)
Translates to: LGWSCSELKQSA*EEPEHPAYHLS
Trigger: GGACAAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAACTCCGAGCAGGACCACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000473682.5
CDS GCA 72 bp CTGGGTGAGTTGGTGGGCAAGCGCTGCCACCTTCAGTaGCAGCACAATCTGGGGTCAGCAAAGAGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: LGELVGKRCHLQ*QHNLGSAKRGS
Trigger: GCTACCCCTCTTTGCTGACCCCAGATTGTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp CACATGGAGGCCAAGGCCCCAGGGTACCACAGAGACTaGCTAACCTGTCGGGTGCTTCTGGCAGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: HMEAKAPGYHRD*LTCRVLLAVLE
Trigger: TTCCAGGACTGCCAGAAGCACCCGACAGGTTAGGCAGTCTCTGTGGTACCCTGGGGCCTTGGCCTCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488786.1
CDS CAA 90 bp TTGAAGCAGTCGGCGTTGGAAGAGCCTGAACACCCGGCCTACCACTaGTCCTTCCATCTCTGGGCCTTCAGGACAGAGCGGACTCCCCTC +
Preference number: 6 (lower is better)
Translates to: LKQSALEEPEHPAYH*SFHLWAFRTERTPL
Trigger: GAGGGGAGTCCGCTCTGTCCTGAAGGCCCAGAGATGGAAGGACAAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000473682.5
CDS GCA 72 bp TCCTTGAGGGTACTGGGTGAGTTGGTGGGCAAGCGCTaGCACCTTCAGTGCCAGCACAATCTGGGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SLRVLGELVGKR*HLQCQHNLGSA
Trigger: TGCTGACCCCAGATTGTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp CCTCGTGCTTGTGGGGCTGCAGAGGGAGCACTAGCATaGCAGCAGGTCCTGGGCTGTGCTTTTTCTACAACC +
Preference number: 6 (lower is better)
Translates to: PRACGAAEGALA*QQVLGCAFSTT
Trigger: GGTTGTAGAAAAAGCACAGCCCAGGACCTGCTGCCATGCTAGTGCTCCCTCTGCAGCCCCACAAGCACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS TCA 72 bp AGAAAGGGGCTGCTTCGGTCTCCAGCCACAACTCTGTaGAGCCAAGCCACGCGCTGTCTTCCAGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: RKGLLRSPATTL*SQATRCLPERE
Trigger: TTCCCTCTCTGGAAGACAGCGCGTGGCTTGGCTTCACAGAGTTGTGGCTGGAGACCGAAGCAGCCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357640.9
CDS TCA 72 bp CTGCTCGGAGTTGAAGCAGTCGGCGTTGGAAGAGCCTaGACACCCGGCCTACCACTTGTCCTTCCATCTCTG +
Preference number: 6 (lower is better)
Translates to: LLGVEAVGVGRA*TPGLPLVLPSL
Trigger: CAGAGATGGAAGGACAAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAACTCCGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000473682.5
CDS TCA 72 bp GGTGACCTCCACACCTCAAGGCCGCCTTGCCAATGCTaGGATACCTGGATACTGGCCAGAACCACCAGTCAC +
Preference number: 6 (lower is better)
Translates to: GDLHTSRPPCQC*DTWILARTTSH
Trigger: GTGACTGGTGGTTCTGGCCAGTATCCAGGTATCTCAGCATTGGCAAGGCGGCCTTGAGGTGTGGAGGTCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS GCA 72 bp AGGAAAGAAACCACTGACACAGAAGCCACGGAAATGTaGTGGAGAGGCCACATGGAGGCCAAGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: RKETTDTEATEM*WRGHMEAKAPG
Trigger: CCCTGGGGCCTTGGCCTCCATGTGGCCTCTCCAGCACATTTCCGTGGCTTCTGTGTCAGTGGTTTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477586.5
ENST00000488786.1
CDS CCA 72 bp CGGGAGGCACGGCTCAAAGGGACACTACCAGGCAGGTaGAAGAGACTCTACTTGCCCCTGAGCGTCATAATG +
Preference number: 6 (lower is better)
Translates to: REARLKGTLPGR*KRLYLPLSVIM
Trigger: CATTATGACGCTCAGGGGCAAGTAGAGTCTCTTCCACCTGCCTGGTAGTGTCCCTTTGAGCCGTGCCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp CGTGTCAGTGAAATGAACTCAGTGCCTGAGTCGGGGATGAAGCTCTaGAGAGTGACAGTCTTCCCAGGAGCAGGGAAGGCTGCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: RVSEMNSVPESGMKL*RVTVFPGAGKAASR
Trigger: CCGAGAGGCAGCCTTCCCTGCTCCTGGGAAGACTGTCACTCTCAAGAGCTTCATCCCCGACTCAGGCACTGAGTTCATTTCACTGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CAA 90 bp CTACAACCAGTGCTGCCAATAAGCCCGGAGTTTTGCAGCTCAGGCTaGAGCAAGCCCAGCCGTGGAGCTGAGCAGACTGCAGAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LQPVLPISPEFCSSG*SKPSRGAEQTAERK
Trigger: CTTCCTTTCTGCAGTCTGCTCAGCTCCACGGCTGGGCTTGCTCAAGCCTGAGCTGCAAAACTCCGGGCTTATTGGCAGCACTGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp GGCCACCAGCATCAAAAGAAGAAATCCTTGAGGGTACTGGGTGAGTaGGTGGGCAAGCGCTGCCACCTTCAGTGCCAGCACAATCTGGGG +
Preference number: 6 (lower is better)
Translates to: GHQHQKKKSLRVLGE*VGKRCHLQCQHNLG
Trigger: CCCCAGATTGTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATGCTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp CAAGGCCGCCTTGCCAATGCTGAGATACCTGGATACTaGCCAGAACCACCAGTCACTCAGGATCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: QGRLANAEIPGY*PEPPVTQDQGQ
Trigger: TTGGCCCTGATCCTGAGTGACTGGTGGTTCTGGCCAGTATCCAGGTATCTCAGCATTGGCAAGGCGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS CAA 90 bp CAGCAGGGAGGTCAGAATGGCCACCAGCATCAAAAGAAGAAATCCTaGAGGGTACTGGGTGAGTTGGTGGGCAAGCGCTGCCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: QQGGQNGHQHQKKKS*RVLGELVGKRCHLQ
Trigger: CTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATGCTGGTGGCCATTCTGACCTCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp GTCCACTCATGCTGGTTGGAGCAGGAGGCTAGAAGGCTAAGCCTCTaGGTACCACTCTGTCCTCCAACTCCCACTGTAGATTCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: VHSCWLEQEARRLSL*VPLCPPTPTVDSRG
Trigger: ACCTCGGGAATCTACAGTGGGAGTTGGAGGACAGAGTGGTACCAAGAGGCTTAGCCTTCTAGCCTCCTGCTCCAACCAGCATGAGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp CGGCAGGCAAGAGGCGCCTGCAGTATCCAATCTTTCTaGTCCCATCCACATTGGTCAGAACGAAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RQARGACSIQSF*SHPHWSERRRR
Trigger: CCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGCCTCTTGCCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000477586.5
CDS GCA 72 bp AGCAGGACCTCTTCCATAGGGCTGTCCATGACCTCCTaGTGGAAGCGCATTTGTACTCCAACCATGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SRTSSIGLSMTS*WKRICTPTMKG
Trigger: CCCCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAGCCCTATGGAAGAGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS GCA 72 bp AGGGGCAGTTCTGAGCTGCACAGACCAAGAGGCGCCTaGAGTATCCAATCTTTCTGCTCCCATCCACATTGG +
Preference number: 6 (lower is better)
Translates to: RGSSELHRPRGA*SIQSFCSHPHW
Trigger: CCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGCCTCTTGGTCTGTGCAGCTCAGAACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp ACTCAGGATCAGGGCCAAATGGGCAGTTTCCACACCTaGCCTGGTAGACTTGAAACCATGGGGAGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: TQDQGQMGSFHT*PGRLETMGSQA
Trigger: TGCTTGGCTCCCCATGGTTTCAAGTCTACCAGGGCAGGTGTGGAAACTGCCCATTTGGCCCTGATCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477586.5
ENST00000488786.1
CDS CCA 72 bp AGGACCTCTTCCATAGGGCTGTCCATGACCTCCTGCTaGAAGCGCATTTGTACTCCAACCATGAAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: RTSSIGLSMTSC*KRICTPTMKGV
Trigger: CACCCCCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAGCCCTATGGAAGAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CAA 72 bp TTTTCTACAACCAGTGCTGCCAATAAGCCCGGAGTTTaGCAGCTCAGGCTTGAGCAAGCCCAGCCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: FSTTSAANKPGV*QLRLEQAQPWS
Trigger: GCTCCACGGCTGGGCTTGCTCAAGCCTGAGCTGCAAAACTCCGGGCTTATTGGCAGCACTGGTTGTAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp TTTCTCTGTACTTTAACCTCAGTGCCTGAGTCGGGGATGAAGCTCTaGAGAGTGACAGTCTTCCCAGGAGCAGGGAAGGCTGCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: FLCTLTSVPESGMKL*RVTVFPGAGKAASR
Trigger: CCGAGAGGCAGCCTTCCCTGCTCCTGGGAAGACTGTCACTCTCAAGAGCTTCATCCCCGACTCAGGCACTGAGGTTAAAGTACAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS TCA 72 bp GTCAGAATGGCCACCAGCATCAAAAGAAGAAATCCTTaGGGGTACTGGGTGAGTTGGTGGGCAAGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: VRMATSIKRRNP*GYWVSWWASAA
Trigger: GGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATGCTGGTGGCCATTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp ACAGAGTTTCCTCCCCTCCTCCTCCAAAGGTCCTGCTaGGGTCAGAGCATAATGAAGTCCTTTCTGGTCACC +
Preference number: 6 (lower is better)
Translates to: TEFPPLLLQRSC*GQSIMKSFLVT
Trigger: GGTGACCAGAAAGGACTTCATTATGCTCTGACCCCAGCAGGACCTTTGGAGGAGGAGGGGAGGAAACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp CATCAAAAGAAGAAATCCTTGAGGGTACTGGGTGAGTaGGTGGGCAAGCGCTGCCACCTTCAGTGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: HQKKKSLRVLGE*VGKRCHLQCQH
Trigger: GTGCTGGCACTGAAGGTGGCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp GGTCAGAATGGCCACCAGCATCAAAAGAAGAAATCCTaGAGGGTACTGGGTGAGTTGGTGGGCAAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: GQNGHQHQKKKS*RVLGELVGKRC
Trigger: GCAGCGCTTGCCCACCAACTCACCCAGTACCCTCAAGGATTTCTTCTTTTGATGCTGGTGGCCATTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp TGCTGGTTGGAGCAGGAGGCTAGAAGGCTAAGCCTCTaGGTACCACTCTGTCCTCCAACTCCCACTGTAGAT +
Preference number: 6 (lower is better)
Translates to: CWLEQEARRLSL*VPLCPPTPTVD
Trigger: ATCTACAGTGGGAGTTGGAGGACAGAGTGGTACCAAGAGGCTTAGCCTTCTAGCCTCCTGCTCCAACCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp GCCAAATGGGCAGTTTCCACACCTGCCCTGGTAGACTaGAAACCATGGGGAGCCAAGCAGAGGAAAGAAACC +
Preference number: 6 (lower is better)
Translates to: AKWAVSTPALVD*KPWGAKQRKET
Trigger: GGTTTCTTTCCTCTGCTTGGCTCCCCATGGTTTCAAGTCTACCAGGGCAGGTGTGGAAACTGCCCATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477586.5
ENST00000488786.1
CDS CAA 72 bp TGGGCCCTTTCTGGTTCCTTTAAAGCTTCCCCTGAATaGTCCTGGGGTGGTCCTGGATACTGGCCAGAACCA +
Preference number: 6 (lower is better)
Translates to: WALSGSFKASPE*SWGGPGYWPEP
Trigger: TGGTTCTGGCCAGTATCCAGGACCACCCCAGGACAATTCAGGGGAAGCTTTAAAGGAACCAGAAAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488786.1
CDS CAA 90 bp TCGGCGGTTGGTCTTGGAGGTCAGAGCCTTACAGAAGGATCTTTCTaGGAAGTGGCCTTGCCCATTTGCCTCCCGCTTGATATAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SAVGLGGQSLTEGSF*EVALPICLPLDIGS
Trigger: GCTTCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS TCA 72 bp AACGAAGGAGAAGGTCTCCCTGGGATACTCGGTGAGTaGTGCCCACTCATTCCCATCTGGGAAGCAGAACAA +
Preference number: 6 (lower is better)
Translates to: NEGEGLPGILGE*CPLIPIWEAEQ
Trigger: TTGTTCTGCTTCCCAGATGGGAATGAGTGGGCATCACTCACCGAGTATCCCAGGGAGACCTTCTCCTTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
ENST00000473822.5
ENST00000477586.5
ENST00000488786.1
CDS GCA 72 bp CACAGACCAAGAGGCGCCTGCAGTATCCAATCTTTCTaGTCCCATCCACATTGGTCAGAACGAAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: HRPRGACSIQSF*SHPHWSERRRR
Trigger: CCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGCCTCTTGGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp CTGGTCACCAGTGGATGGCATGGCCCCCATGGATTCTaGTCAAATTCTGTCTCAGATGCACTGGCACTCAAA +
Preference number: 6 (lower is better)
Translates to: LVTSGWHGPHGF*SNSVSDALALK
Trigger: TTTGAGTGCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp CTTGGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGAAGTGGCCTaGCCCATTTGCCTCCCGCTTGATATAGGAAGCATAATGGCCCAC +
Preference number: 6 (lower is better)
Translates to: LGGQSLTEGSFLEVA*PICLPLDIGSIMAH
Trigger: GTGGGCCATTATGCTTCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 72 bp GCCTGCAGTATCCAATCTTTCTGCTCCCATCCACATTaGTCAGAACGAAGGAGAAGGTCTCCCTGGGATACT +
Preference number: 6 (lower is better)
Translates to: ACSIQSFCSHPH*SERRRRSPWDT
Trigger: AGTATCCCAGGGAGACCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
ENST00000473822.5
ENST00000477586.5
ENST00000488786.1
CDS CCA 72 bp GTCTTGGAGGTCAGAGCCTTACAGAAGGATCTTTCTTaGAAGTGGCCTTGCCCATTTGCCTCCCGCTTGATA +
Preference number: 6 (lower is better)
Translates to: VLEVRALQKDLS*KWPCPFASRLI
Trigger: TATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 90 bp GGGGTGGTCCTGAAATCAAGCCAGAGCCCATTTAGTATAATCTCATaGATCCATTCCTGGAGTGGAGTCTGTGAGAATCCGGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: GVVLKSSQSPFSIIS*IHSWSGVCENPGDL
Trigger: GAGGTCACCCGGATTCTCACAGACTCCACTCCAGGAATGGATCAATGAGATTATACTAAATGGGCTCTGGCTTGATTTCAGGACCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS GCA 72 bp TTGAGAGAAACCACAAGAAGGTATTCAAAGAAGTGCTaGCCCCCAGCAAAGTTGGGCAAAGAGTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LRETTRRYSKKC*PPAKLGKECSW
Trigger: CCAGGAGCACTCTTTGCCCAACTTTGCTGGGGGGCAGCACTTCTTTGAATACCTTCTTGTGGTTTCTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000463713.5
ENST00000473682.5
ENST00000473822.5
ENST00000477586.5
ENST00000488786.1
CDS GCA 72 bp ACAGAAGGATCTTTCTTGGAAGTGGCCTTGCCCATTTaGCTCCCGCTTGATATAGGAAGCATAATGGCCCAC +
Preference number: 6 (lower is better)
Translates to: TEGSFLEVALPI*LPLDIGSIMAH
Trigger: GTGGGCCATTATGCTTCCTATATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 72 bp CAGAGCATAATGAAGTCCTTTCTGGTCACCAGTGGATaGCATGGCCCCCATGGATTCTGCTCAAATTCTGTC +
Preference number: 6 (lower is better)
Translates to: QSIMKSFLVTSG*HGPHGFCSNSV
Trigger: GACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAGAAAGGACTTCATTATGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp TGGGCCCTTTCTGGTTCCTTTAAAGCTTCCCCTGAATaGTCCTGGGGTGGTCCTCCATCAAACTCATGTTTC +
Preference number: 6 (lower is better)
Translates to: WALSGSFKASPE*SWGGPPSNSCF
Trigger: GAAACATGAGTTTGATGGAGGACCACCCCAGGACAATTCAGGGGAAGCTTTAAAGGAACCAGAAAGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473822.5
CDS CAA 72 bp AAAGGGACACTACCAGGCAGGTGGAAGAGACTCTACTaGCCCCTGAGCGTCATAATGTTCTCATACTGGTTC +
Preference number: 6 (lower is better)
Translates to: KGTLPGRWKRLY*PLSVIMFSYWF
Trigger: GAACCAGTATGAGAACATTATGACGCTCAGGGGCAAGTAGAGTCTCTTCCACCTGCCTGGTAGTGTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp TGGCCCCCATGGATTCTGCTCAAATTCTGTCTCAGATaGACTGGCACTCAAATTAGCTCCAAGAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: WPPWILLKFCLR*TGTQISSKRSP
Trigger: AGGACTTCTCTTGGAGCTAATTTGAGTGCCAGTGCATCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp CATAATGAAGTCCTTTCTGGTCACCAGTGGATGGCATaGCCCCCATGGATTCTGCTCAAATTCTGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: HNEVLSGHQWMA*PPWILLKFCLR
Trigger: TCTGAGACAGAATTTGAGCAGAATCCATGGGGGCCATGCCATCCACTGGTGACCAGAAAGGACTTCATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp TCACCAACCGACATTAAGAAGGTTCCTTCACAAAGATaGACCAGCAGGACCTCTTCCATAGGGCTGTCCATG +
Preference number: 6 (lower is better)
Translates to: SPTDIKKVPSQR*TSRTSSIGLSM
Trigger: CATGGACAGCCCTATGGAAGAGGTCCTGCTGGTCAATCTTTGTGAAGGAACCTTCTTAATGTCGGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CAA 90 bp AAGAGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTTGGTCTaGGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGAAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: KSCVFTNFFTNRRLV*EVRALQKDLSWKWP
Trigger: AGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 90 bp GGGCAGAAGTTTCTTCTGCTTGTCCTACTTCAACTACTTTCTTACTaGGCTAGAGTGGGAACAGTAGCTGTCTCTGCAAGAGGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GQKFLLLVLLQLLSY*ARVGTVAVSARGPV
Trigger: GACTGGACCTCTTGCAGAGACAGCTACTGTTCCCACTCTAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAACTTCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 90 bp AGTGAGAAGAGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTaGGTCTTGGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: SEKSCVFTNFFTNRR*VLEVRALQKDLSWK
Trigger: CTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS TCA 72 bp CTGCAGGAGGATTCTTGCTCTTCTCGGCTTCCTGGATaGAAAGTGAGAAGAGCTGTGTCTTCACAAACTTCT +
Preference number: 6 (lower is better)
Translates to: LQEDSCSSRLPG*KVRRAVSSQTS
Trigger: AGAAGTTTGTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CCA 72 bp CAGTGCAATAGAGAACTAAAATCCACATGTTCTAGGTaGGAGTCCAGGGGCCGTGTCAGTGAAATGAACTCA +
Preference number: 6 (lower is better)
Translates to: QCNRELKSTCSR*ESRGRVSEMNS
Trigger: TGAGTTCATTTCACTGACACGGCCCCTGGACTCCCACCTAGAACATGTGGATTTTAGTTCTCTATTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS CCA 72 bp GCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTTaGTCTTGGAGGTCAGAGCCTTACAGAAGGATCTTT +
Preference number: 6 (lower is better)
Translates to: AVSSQTSSQIGG*SWRSEPYRRIF
Trigger: AAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 72 bp AGCTGTGTCTTCACAAACTTCTTCACAAATCGGCGGTaGGTCTTGGAGGTCAGAGCCTTACAGAAGGATCTT +
Preference number: 6 (lower is better)
Translates to: SCVFTNFFTNRR*VLEVRALQKDL
Trigger: AAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGACACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS TCA 72 bp GAGAAGTCCTGGGGACCTCAACTGTTCTTCTACCCTTaGAGGAGTCAGAATGGGTCTTATAACTCCTTCATA +
Preference number: 6 (lower is better)
Translates to: EKSWGPQLFFYP*RSQNGSYNSFI
Trigger: TATGAAGGAGTTATAAGACCCATTCTGACTCCTTCAAGGGTAGAAGAACAGTTGAGGTCCCCAGGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CCA 72 bp TCTTCACAAACTTCTTCACAAATCGGCGGTTGGTCTTaGAGGTCAGAGCCTTACAGAAGGATCTTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: SSQTSSQIGGWS*RSEPYRRIFLG
Trigger: TCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAGAAGTTTGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 90 bp TCGACGGATGAGGAAATTGAAACTCAGGGCAGAAGTTTCTTCTGCTaGTCCTACTTCAACTACTTTCTTACTTGGCTAGAGTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: STDEEIETQGRSFFC*SYFNYFLTWLEWEQ
Trigger: CTGTTCCCACTCTAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAACTTCTGCCCTGAGTTTCAATTTCCTCATCCGTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp ACAAAGAACTGCACAAAGGGGCCTGAAACATGCTCGTaGATTTGTTCTGCAGTCTTTAACTCATTGATCCCC +
Preference number: 6 (lower is better)
Translates to: TKNCTKGPETCS*ICSAVFNSLIP
Trigger: GGGGATCAATGAGTTAAAGACTGCAGAACAAATCAACGAGCATGTTTCAGGCCCCTTTGTGCAGTTCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 72 bp CTGAAATCAAGCCAGAGCCCATTTAGTATAATCTCATaGATCCATTCCTGGAGTGGAGTCTGTGAGAATCCG +
Preference number: 6 (lower is better)
Translates to: LKSSQSPFSIIS*IHSWSGVCENP
Trigger: CGGATTCTCACAGACTCCACTCCAGGAATGGATCAATGAGATTATACTAAATGGGCTCTGGCTTGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477586.5
CDS CAA 90 bp GGTATCAAGTTAGAAGGATCAGAAAATCTGGGTTTGATTTCAGCTTaGTCCATTCTAACCAAGTCCCAGTCCCCATCTGGCTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: GIKLEGSENLGLISA*SILTKSQSPSGSVS
Trigger: AGAAACTGAGCCAGATGGGGACTGGGACTTGGTTAGAATGGACAAAGCTGAAATCAAACCCAGATTTTCTGATCCTTCTAACTTGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS TCA 72 bp AAGAAGGTTCCTTCACAAAGATTGACCAGCAGGACCTaGAATAAACATAGACTGGCTTTCTCTGGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: KKVPSQRLTSRT*NKHRLAFSGPL
Trigger: AAGAGGACCAGAGAAAGCCAGTCTATGTTTATTTCAGGTCCTGCTGGTCAATCTTTGTGAAGGAACCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468692.1
CDS TCA 72 bp CACCAACCGACATTAAGAAGGTTCCTTCACAAAGATTaGCCAGCAGGACCTGAAATAAACATAGACTGGCTT +
Preference number: 6 (lower is better)
Translates to: HQPTLRRFLHKD*PAGPEINIDWL
Trigger: AAGCCAGTCTATGTTTATTTCAGGTCCTGCTGGTCAATCTTTGTGAAGGAACCTTCTTAATGTCGGTTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468692.1
CDS CAA 72 bp TTTCTTCTGCTTGTCCTACTTCAACTACTTTCTTACTaGGCTAGAGTGGGAACAGTAGCTGTCTCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: FLLLVLLQLLSY*ARVGTVAVSAR
Trigger: TCTTGCAGAGACAGCTACTGTTCCCACTCTAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS TCA 72 bp ATGATTTTTCTCTCCAGCACGGCAGAGGCAAAGATCTaGAGTATCTGTTCAAAACTGAGACAGTGCAATAGA +
Preference number: 6 (lower is better)
Translates to: MIFLSSTAEAKI*SICSKLRQCNR
Trigger: TCTATTGCACTGTCTCAGTTTTGAACAGATACTTCAGATCTTTGCCTCTGCCGTGCTGGAGAGAAAAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357640.9
ENST00000369752.5
CDS TCA 72 bp TCATATATCACCTCATTTAAGCCTCACGCCACCCAGTaGGATAGGAAGGTGAGATTATTATATCCATTCGAC +
Preference number: 6 (lower is better)
Translates to: SYITSFKPHATQ*DRKVRLLYPFD
Trigger: GTCGAATGGATATAATAATCTCACCTTCCTATCTCACTGGGTGGCGTGAGGCTTAAATGAGGTGATATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp ATCTTGACAAAGAACTGCACAAAGGGGCCTGAAACATaGTCGTTGATTTGTTCTGCAGTCTTTAACTCATTG +
Preference number: 6 (lower is better)
Translates to: ILTKNCTKGPET*SLICSAVFNSL
Trigger: CAATGAGTTAAAGACTGCAGAACAAATCAACGAGCATGTTTCAGGCCCCTTTGTGCAGTTCTTTGTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357640.9
ENST00000369752.5
ENST00000468692.1
CDS CAA 72 bp GAGGAAATTGAAACTCAGGGCAGAAGTTTCTTCTGCTaGTCCTACTTCAACTACTTTCTTACTTGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: EEIETQGRSFFC*SYFNYFLTWLE
Trigger: CTCTAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAACTTCTGCCCTGAGTTTCAATTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp GGTGAGATTATTATATCCATTCGACGGATGAGGAAATaGAAACTCAGGGCAGAAGTTTCTTCTGCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: GEIIISIRRMRK*KLRAEVSSACP
Trigger: AGGACAAGCAGAAGAAACTTCTGCCCTGAGTTTCAATTTCCTCATCCGTCGAATGGATATAATAATCTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp ACTTACAGCTCCAAAAGGTCAGGGACCACATTCATTTaGGTCACCACTGTATTCCCAGAAAATAGTATAGCT +
Preference number: 6 (lower is better)
Translates to: TYSSKRSGTTFI*VTTVFPENSIA
Trigger: AGCTATACTATTTTCTGGGAATACAGTGGTGACCAAAATGAATGTGGTCCCTGACCTTTTGGAGCTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS GCA 72 bp GATGAGGAAATTGAAACTCAGGGCAGAAGTTTCTTCTaGTTGTCCTACTTCAACTACTTTCTTACTTGGCTA +
Preference number: 6 (lower is better)
Translates to: DEEIETQGRSFF*LSYFNYFLTWL
Trigger: TAGCCAAGTAAGAAAGTAGTTGAAGTAGGACAAGCAGAAGAAACTTCTGCCCTGAGTTTCAATTTCCTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473682.5
CDS CAA 72 bp GAAGGAGTCAGAATGGGTCTTATAACTCCTTCATATTaGTTTAGTGCTCTGCCTTTTATAAAGAGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: EGVRMGLITPSY*FSALPFIKSLL
Trigger: GAGAAGACTCTTTATAAAAGGCAGAGCACTAAACAAATATGAAGGAGTTATAAGACCCATTCTGACTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473682.5