Pregenerated sensors for DEFB116 (Homo sapiens)
Ensembl gene IDs: ENSG00000215545Ensembl transcript IDs: ENST00000400549.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | TTGGGCAGGTTAAGTATTGGATTTCATATTCTCTGCAGGCGTTTCTaGACATGCCTTGGTAAAGCTCACATGGATTCCAAGGCTCTCGGC | + |
Preference number: 5 (lower is better) Translates to: LGRLSIGFHILCRRF*TCLGKAHMDSKALG Trigger: GCCGAGAGCCTTGGAATCCATGTGAGCTTTACCAAGGCATGTGCAGAAACGCCTGCAGAGAATATGAAATCCAATACTTAACCTGCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400549.1 |
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CDS GCA 90 bp | AGGTTAAGTATTGGATTTCATATTCTCTGCAGGCGTTTCTGCACATaGCTTGGTAAAGCTCACATGGATTCCAAGGCTCTCGGCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: RLSIGFHILCRRFCT*LGKAHMDSKALGSC Trigger: GCAAGAGCCGAGAGCCTTGGAATCCATGTGAGCTTTACCAAGGCATGTGCAGAAACGCCTGCAGAGAATATGAAATCCAATACTTAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400549.1 |
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CDS GCA 72 bp | CATTTGGGCAGGTTAAGTATTGGATTTCATATTCTCTaGAGGCGTTTCTGCACATGCCTTGGTAAAGCTCAC | + |
Preference number: 6 (lower is better) Translates to: HLGRLSIGFHIL*RRFCTCLGKAH Trigger: GTGAGCTTTACCAAGGCATGTGCAGAAACGCCTGCAGAGAATATGAAATCCAATACTTAACCTGCCCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400549.1 |
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CDS GCA 72 bp | TTAAGTATTGGATTTCATATTCTCTGCAGGCGTTTCTaGACATGCCTTGGTAAAGCTCACATGGATTCCAAG | + |
Preference number: 6 (lower is better) Translates to: LSIGFHILCRRF*TCLGKAHMDSK Trigger: CTTGGAATCCATGTGAGCTTTACCAAGGCATGTGCAGAAACGCCTGCAGAGAATATGAAATCCAATACTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400549.1 |